Ec-28_000120.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-28_000120.1
Unique NameEc-28_000120.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length855
Homology
[Close]
BLAST of Ec-28_000120.1 vs. uniprot
Match: A0A6H5L7S8_9PHAE (Tr-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L7S8_9PHAE)

HSP 1 Score: 1470 bits (3806), Expect = 0.000e+0
Identity = 784/869 (90.22%), Postives = 812/869 (93.44%), Query Frame = 2 
Query:   50 MLLARRRLLPSGRGRLAAPCCKLWLPERRDAEASHVAQASREIRAARHLPRRRSCCIFTGTAGALSHRQLECGCAFLSKA-SGGGLRLLHGTSRAAAKAKLGHGVRTETPAIPSFIEIRELASLLRVKPRALFKSMGGYQEKKKHRIALSGVPYAFPNLGNVVVPFQDAQAVAKVLGKEIRFLDIEKKPQRAAILARSDDSRAPLWEKGQPAGQGRRPVVVLLGHFNHGKTTILDALRGPSSGIADREPGGITQEIRARTVSLEPTSGETAQDTNDDDAAASPRSRSAKVATVLDTPGQEIFYRMRTNGARVADAVVLVVS--------------AVDGVCLQTSESIGCAEELGLPAVVVLNKIDLLPDEVAAQRVKELSAEVREFVAIQDAKVLPLSAHTGFGLDNLRTSLADALSQTFLPKERVHPTMADPENFGLQPSHSETSPDLGIPRVDPDPAPPVGQAGSEVAVAAGVHSAEGGSAGGVEVVMAEAPEGAATGTVLDYTSSAKTGKVLLVLVDRGVLQPGDPFVSGMLWGFVRSIYDEEGDELLENAGSGVAAKVVIVPRTRVSNAPLGEPFRVLTKEAAEKVAHVRLLARTMDNFIDHNKLDREFAHLLGGDEDDNDQSYGGSDEDDQPGRPAEQPDGTGDDVDYSETTLRSTARSPEPSNRRWSNLEQEEELAPENMPVTIVVKADNANTLASVLDALGDWGDVENPTENVGEQLAAEASDSNPEGVLERVRRRQPQEWGEGDLQHKQRRRLLVSVAHSGVGAVTSSDVRLARDCECPVFAHNVRTDTSATRELKRVGGGVVPALPEGGAVAVGEEVSVGIGGQEGFIGRAGEGRECVVVSETVGELLGEIERFVLRVR 2611
            MLLARRRLLPSGRGRLAAPCCKLWLP+RRDAEASHVAQASREIRA RHLPR  S C  TGTAGALSHRQLEC CAFL KA S GGLRL HGTSRAAAKAKLG G RTETPAIPSFIEIRELASLLRVKPRALFKSMGGYQEKKKHRI LSGVPYAFPNLGNVVVPFQDAQAVAKVLGKEIRFLDIEKKPQRAAILARSDDSRAPLWE+G+PAGQGRRPVVVLLGHFNHGKTTILDALRGPSSGIADREPGGITQEIRARTVSLEPTSGETAQ+TNDDD AAS RSRSAKVAT+LDTPGQEIFYRMRTNGARVADAVVLVVS              AVDGVCLQTSESIGCAEELGLPAVVVLNKIDLLP+EVAAQRVKELSAEVRE+VAIQDAKVLPLSAHTGFGLDNLRTSLADAL+Q+F  KERV+PTMAD E FGLQP  SET PDLGIP VDPDPAPPV    SEVAVAAGVHSAEGGSAGGVEVVMAEAPEGAATGTVLDYTSSAKTGK+LLVLVDRGVL+PGDPFVSGMLWGFVRSIYDEEGD+LLE+AGSGVAAKVVI+ RTRVS+APLGEPFRVLTKEAAE+VA VRLLART+DNF+DHNKLDR FAHLL GDEDD+D S+ GSDEDDQPGRPAEQP GTGDDVDYSETTL+STARSPEPS+RR SNLEQ+EELAPE+MPVTIVVK DNANTLASVLDALGDWGDV+N TENVGEQLAAEASDSNPEGVLERVRR++PQEW E DLQHKQRRRLLVSVAHSGVGAVTSSDVRLARDCECPVFAHNVRTD SATRELKRVGGGVVPALPEG A AVGEEVSVGIGGQEGFIGRAGEGRECVVVSETVGELLGEIERFVLRVR
Sbjct:    1 MLLARRRLLPSGRGRLAAPCCKLWLPDRRDAEASHVAQASREIRATRHLPRGHSFCTSTGTAGALSHRQLECECAFLGKARSVGGLRLFHGTSRAAAKAKLGRGARTETPAIPSFIEIRELASLLRVKPRALFKSMGGYQEKKKHRIVLSGVPYAFPNLGNVVVPFQDAQAVAKVLGKEIRFLDIEKKPQRAAILARSDDSRAPLWEEGRPAGQGRRPVVVLLGHFNHGKTTILDALRGPSSGIADREPGGITQEIRARTVSLEPTSGETAQNTNDDDGAASLRSRSAKVATILDTPGQEIFYRMRTNGARVADAVVLVVSVALCANFVLVSVSAAVDGVCLQTSESIGCAEELGLPAVVVLNKIDLLPNEVAAQRVKELSAEVREYVAIQDAKVLPLSAHTGFGLDNLRTSLADALNQSFPQKERVYPTMADLEGFGLQPGQSETFPDLGIPGVDPDPAPPVRPTESEVAVAAGVHSAEGGSAGGVEVVMAEAPEGAATGTVLDYTSSAKTGKMLLVLVDRGVLRPGDPFVSGMLWGFVRSIYDEEGDKLLEHAGSGVAAKVVIIARTRVSDAPLGEPFRVLTKEAAEQVAQVRLLARTIDNFVDHNKLDRGFAHLLRGDEDDDDLSHDGSDEDDQPGRPAEQPVGTGDDVDYSETTLKSTARSPEPSSRRRSNLEQQEELAPEDMPVTIVVKTDNANTLASVLDALGDWGDVDNSTENVGEQLAAEASDSNPEGVLERVRRKKPQEWREDDLQHKQRRRLLVSVAHSGVGAVTSSDVRLARDCECPVFAHNVRTDASATRELKRVGGGVVPALPEGAAAAVGEEVSVGIGGQEGFIGRAGEGRECVVVSETVGELLGEIERFVLRVR 869
[Close]
BLAST of Ec-28_000120.1 vs. uniprot
Match: A0A835Z5U4_9STRA (Tr-type G domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5U4_9STRA)

HSP 1 Score: 270 bits (689), Expect = 9.490e-74
Identity = 256/822 (31.14%), Postives = 345/822 (41.97%), Query Frame = 2 
Query:  380 IPSFIEIRELASLLRVKPRALFKSMGGYQEKKKHRIALSGVPYAFPNLGNVVVPFQDAQAVAKVLGKEIRFLDIEKKPQRAAILARSDDSRAPLWEKGQPAGQGRRPVVVLLGHFNHGKTTILDALRGPSSGIADREPGGITQEIRARTVSLEPTSGETAQDTNDDDAAASPRSRSAKV--------------------------------------------------------------ATVLDTPGQEIFYRMRTNGARVADAVVLVVSAVDGVCLQTSESIGCAEELGLPAVVVLNKIDLL------------PDE-----------------VAAQRVKELSAEVREFVAIQDAKVLPLSAHTGFGLDNLRTSLADALSQTFLPKERVHPTMADPENFGLQPSHSETSPDLGIPRVDPDPAPPVGQAGSEVAVAAGVHSAEGGSAGGVEVVMAEAPEGAATGTVLDYTSSAKTGKVLLVLVDRGVLQPGDPFVSGMLWGFVRSIYDEEGDELLENAGSGV-AAKVVIVPRTRVSNAPLGEPFRVLTKEAAEKVAHVR----LLARTMDNFIDHNKLDREFAHLLGG-----------------------------------------DE-DDNDQSYGGSDEDDQPGRPAEQPDGTGDDVDY---SETTLRSTARSPEPSNRRWSNLEQEEELAPENMPVTIVVKADNANTLASVLDALGDWGDVENPTENVGEQLAAEASDSNPEGVLERVRRRQPQEWGEGDLQHKQRRRLLVSVAHSGVGAVTSSDVRLARDCECPVFAHNVRTDTSATRELKR 2422
            + + I  +ELA  LRV  +A FK++GG + ++K+ + L   P++FP+L   +VP++DA   A  L +E+++L  E  P                 E+  P G    PVVVLLGHFNHGKTT+LDAL GP S IA  E  GITQEIRARTV L           +D D                                                                          AT LDTPGQ+IFYRMR  GA VAD  V+VVSAVDGVC QT ESIGC ++LGLPAVV + K+DL+            P E                 +A QRV++L+ E+ EFVA+  A V+P+SA TG G+D+LR +++  LS+       V     D  + G     SE++ D+     D        +A    A   G   AEG     +        E  A  +V+DY +S + G  + +LV  G L PG  FV+G  WG++R++YDE G            AA+V +         PLGEPF V+  E A   AH       LAR      D   L+ + A  +                                           DE D+ D + G SD D +        DG    VD    +   LR   R  E           E EL    +   +V+KAD AN+LA++LDA+ +  D+         Q+ A A+ +         R R P       L  K +   +  V  +G+G VT SDVR A    CPVFA N R D    R  +R
Sbjct:    3 LQAIIGYKELAKALRVNAKAAFKALGGVRARRKYHLPLQCGPHSFPSLAAAIVPYEDAVKAAAALKREVQYLATEPAPM----------------ERRPPRGPPEAPVVVLLGHFNHGKTTLLDALLGPDSRIAAGEACGITQEIRARTVQL----------LDDADGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSATFLDTPGQDIFYRMRAGGAEVADLAVVVVSAVDGVCQQTGESIGCLDDLGLPAVVAVTKVDLVAGGGRRRRETKEPFEQSAPHVHVARSLTHACSLATQRVRKLARELHEFVALNGAPVVPVSAVTGAGMDDLRRTISAVLSEQMQAGAAV-----DIGSSGGG-GESESAADVAATGSDACEGTNGVRATXXXAADPGGRPAEGAVTAKIAAAXXXXAE-PAQASVIDYVTSPQLGARMTLLVHAGALAPGAHFVTGGAWGYIRAVYDEVGGAXXXXXXXXXXAAQVAVKLLGGARQVPLGEPFTVMPAERARTAAHTHRLADALARHASRGRDRAVLEPDAAATVXXXXXXXXXXXXXXXXXRFARDDWEXXXXXXXXXXXXXEGDVLDEGDEGDWAAGESDADAE----LALADGAERGVDGDGGASGALRDGERGAEEQGEXXXXXXXEPEL----LCTPVVLKADTANSLAALLDAIDENRDI---------QVGAAAAAAQLVYSKRTYRERAP-------LYGKAKLVAMDMVISAGIGIVTESDVRAADAARCPVFAFNARADAGGRRLARR 767
[Close]
BLAST of Ec-28_000120.1 vs. uniprot
Match: A0A662XFN4_9STRA (Tr-type G domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XFN4_9STRA)

HSP 1 Score: 190 bits (482), Expect = 3.240e-47
Identity = 152/492 (30.89%), Postives = 226/492 (45.93%), Query Frame = 2 
Query:  362 RTETPAIPSFIEIRELASLLRVKPRALFKSMGGYQEKKKHRIALSGVPYAFPNLGNVVVPFQDAQAVAKVLGKEIRFLDIEKKPQRAAILARSDDSRAPLWEKGQPAGQGRRPVVVLLGHFNHGKTTILDALRGPSSG----IADREPGGITQEIRARTVSLEPTSGETAQDTNDDDAAASPRSRSAKVATVLDTPGQEIFYRMRTNGARVADAVVLVVSAVDGVCLQTSESIGCAEELGLPAVVVLNKIDLLPD--EVAAQRVKELSAEVREFVAIQDAKVLPLSAHTGFGLDNLRTSLADALSQTFLPKERVHPTMADPENFGLQPSHSETSPDLGIPRVDPDPAPPVGQAGSEVAVAAGVHSAEGGSAGGVEVVMAEAPEGAATGTVLDYTSSAKTGKVLLVLVDRGVLQPGDPFVSGMLWGFVRSIYDEEGDELLENAGSGVAAKVVIVPRTRVSNAPLGEPFRVLTKEAAEKVAHVRLLARTMDNFI 1819
            R + P +P+FI +R+LA  L      + K +     ++    A+   P  F ++  +V+PF+ AQ VA  LG E+ + D+E         + S  S    W +       R+PV+ ++GH +HGKTT++D LR  ++     +A  E  GITQ+I     +L P                         AT LDTPG   F+RMR++ A+VADAV+L+V+A +GV LQT ESIG  E+ GLP V+ +NK+DLL      +  +V  +  E+R FVA+QD  VL +SA TG GLD LR ++ + +++           +AD                             VG                              PE  A G VL+  +    G VL VL+  G L     FV+GM+ G VRSI D EG EL + A  G    V    +++  +AP    F VL +  A++V   R LA  +++ +
Sbjct:   81 RKQPPVLPAFIRVRDLAKALHRPLDVVLKRVVTRANRRFRLKAVDHPPAEFRSVKEIVLPFRVAQDVAAQLGIEVAYDDVEP------TFSDSSTSSEATWRR-------RQPVIAVMGHVDHGKTTLMDTLRKQTNSGLRQLAPYEKHGITQKINVCEATLAPDVR----------------------ATFLDTPGHFHFFRMRSSAAQVADAVLLIVAADEGVLLQTEESIGAIEDAGLPTVICINKVDLLEGGGTDSTSQVNAVVDELRSFVALQDCPVLQISAKTGAGLDELRHTVGELVAE-----------LADRHKLDAL----------------------VG------------------------------PETHAEGLVLESVALRGRGTVLRVLLKHGELAARQHFVAGMIHGVVRSIRDAEGREL-KRALPGTVVDVTYSNKSKNVDAPNEHGFFVLPEARAKQVVEQRQLALELEDCL 473
[Close]
BLAST of Ec-28_000120.1 vs. uniprot
Match: M4BGI0_HYAAE (Tr-type G domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BGI0_HYAAE)

HSP 1 Score: 186 bits (472), Expect = 4.040e-46
Identity = 151/484 (31.20%), Postives = 230/484 (47.52%), Query Frame = 2 
Query:  362 RTETPAIPSFIEIRELASLLRVKPRALFKSMGGYQEKKKHRIALSGVPYAFPNLGNVVVPFQDAQAVAKVLGKEIRFLDIEKKPQRAAILARSDDSRAPLWEKGQPAGQGRR-PVVVLLGHFNHGKTTILDALRG----PSSGIADREPGGITQEIRARTVSLEPTSGETAQDTNDDDAAASPRSRSAKVATVLDTPGQEIFYRMRTNGARVADAVVLVVSAVDGVCLQTSESIGCAEELGLPAVVVLNKIDLLPDEVAAQRVKELSAEVREFVAIQDAKVLPLSAHTGFGLDNLRTSLADALSQTFLPKERVHPTMADPENFGLQPSHSETSPDLGIPRVDPDPAPPVGQAGSEVAVAAGVHSAEGGSAGGVEVVMAEAPEGAATGTVLDYTSSAKTGKVLLVLVDRGVLQPGDPFVSGMLWGFVRSIYDEEGDELLENAGSGVAAKVVIVPRTRVSNAPLGEPFRVLTKEAAEKVAHVRLLA 1798
            R + P IP+FI +R+LA  LR     + K       ++ H    +  P  F  +  +V+PF+ AQ VA+ LG ++ + D+E  P+   +L+  D+ +            GRR PV+ ++GH +HGKTT++D LR         IA  E  GITQ+I     +L          T+D              AT LDTPG   F+RMR++ A+VADA +L+V+A +GV LQT ESIG  EE  LPA++ +NK+DLL ++   +RV ++  E+R FVA++D+ VL +S  TG GLD LR ++ + +S+  L  +R    +      G Q +H+E                                                       G VL+  +    G VL VL+  G L     FV+GM+ G VRS+ D EG ++ + A  G    +    +++  +AP    F VL +  A++V   R LA
Sbjct:   61 RNQPPVIPAFIRVRDLAKALRQPLDKVLKHTVIKSNRRFHLRTKNHPPAEFKGVKQIVLPFRVAQEVAEQLGVQVAYDDVE--PELLDVLSSCDEEKC----------LGRRQPVIAVMGHVDHGKTTLMDTLRSYMKTSKKMIAPYEKQGITQKINVCEATL----------THD------------VKATFLDTPGHFHFFRMRSSAAQVADAALLIVAADEGVLLQTEESIGAIEETRLPALICINKVDLLGED-GDKRVADIVEELRSFVALKDSPVLIISGKTGAGLDGLRHTVRELVSE--LASDRKLDALV-----GSQ-THAE-------------------------------------------------------GLVLESVALKGRGTVLRVLIKNGELVAKQHFVAGMIHGVVRSMQDAEGRDV-KRALPGTVVDITYSNKSKNVDAPNEHGFFVLPEPRAKQVLEQRELA 445
[Close]
BLAST of Ec-28_000120.1 vs. uniprot
Match: A0A662Y5I4_9STRA (Tr-type G domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y5I4_9STRA)

HSP 1 Score: 189 bits (479), Expect = 2.120e-45
Identity = 153/493 (31.03%), Postives = 228/493 (46.25%), Query Frame = 2 
Query:  362 RTETPAIPSFIEIRELASLLRVKPRALFKSMGGYQEKKKHRIALSGVPYAFPNLGNVVVPFQDAQAVAKVLGKEIRFLDIEKKPQRAAILARSDDSRAPLWEKGQPAGQGRRPVVVLLGHFNHGKTTILDALRGPSSG----IADREPGGITQEIRARTVSLEPTSGETAQDTNDDDAAASPRSRSAKVATVLDTPGQEIFYRMRTNGARVADAVVLVVSAVDGVCLQTSESIGCAEELGLPAVVVLNKIDLLPDEV--AAQRVKELSAEVREFVAIQDAKVLPLSAHTGFGLDNLRTSLADALSQTFLPKERVHPTMADPENF-GLQPSHSETSPDLGIPRVDPDPAPPVGQAGSEVAVAAGVHSAEGGSAGGVEVVMAEAPEGAATGTVLDYTSSAKTGKVLLVLVDRGVLQPGDPFVSGMLWGFVRSIYDEEGDELLENAGSGVAAKVVIVPRTRVSNAPLGEPFRVLTKEAAEKVAHVRLLARTMDNFI 1819
            R + P +P+FI +R+LA  L      + K +     ++     +   P  F ++  +V+PF+ AQ VA  LG E+ + D+E         + S  S    W +       R+PV+ ++GH +HGKTT++D LR  ++     +A  E  GITQ+I     +L P                         AT LDTPG   F+RMR++ A+VADAV+L+V+A +GV LQT ESIG  E+ GLP V+ +NK+DLL +    +  +V  +  E+R FVA+QD  VL +SA TG GLD LR ++ + +++           +AD     GL                       VG                              PE  A G VL+  +    G VL VL+  G L     FV+GM+ G VRSI D EG EL + A  G    V    +++  +AP    F VL +  A++V   R LA  +++ +
Sbjct:   81 RQQPPVLPAFIRVRDLAKALHRPLDVVLKRVVTRANRRFRLKVVDHPPAEFRSVKEIVLPFRVAQDVAAQLGIEVAYDDVEP------TFSDSSTSSEATWRR-------RQPVIAVMGHVDHGKTTLMDTLRKQTNSGLRQLAPYEKHGITQKINVCEATLAPDVR----------------------ATFLDTPGHFHFFRMRSSAAQVADAVLLIVAADEGVLLQTEESIGAIEDAGLPTVICINKVDLLEEGGVDSKSQVDAVVDELRSFVALQDCPVLQISAKTGAGLDGLRHTVGELVAE-----------LADQHKLDGL-----------------------VG------------------------------PETHAEGLVLESVALKGRGTVLRVLLKHGELAVKQHFVAGMIHGVVRSIRDAEGREL-KRALPGTVVDVTYSNKSKNVDAPNEHGFFVLPEARAKQVVEQRQLALELEDCL 473
[Close]
BLAST of Ec-28_000120.1 vs. uniprot
Match: H3GSC9_PHYRM (Tr-type G domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GSC9_PHYRM)

HSP 1 Score: 187 bits (476), Expect = 4.810e-45
Identity = 139/436 (31.88%), Postives = 211/436 (48.39%), Query Frame = 2 
Query:  362 RTETPAIPSFIEIRELASLLRVKPRALFKSMGGYQEKKKHRIALSGVPYAFPNLGNVVVPFQDAQAVAKVLGKEIRFLDIEKKPQRAAILARSDDSRAPLWEKGQPAGQGRRPVVVLLGHFNHGKTTILDALRGPSSG----IADREPGGITQEIRARTVSLEPTSGETAQDTNDDDAAASPRSRSAKVATVLDTPGQEIFYRMRTNGARVADAVVLVVSAVDGVCLQTSESIGCAEELGLPAVVVLNKIDLLPDEVAAQRVKELSAEVREFVAIQDAKVLPLSAHTGFGLDNLRTSLADALSQTFLPKERVHPTMADPENFGLQPSHSETSPDLGIPRVDPDPAPPVGQAGSEVAVAAGVHSAEGGSAGGVEVVMAEAPEGAATGTVLDYTSSAKTGKVLLVLVDRGVLQPGDPFVSGMLWGFVRSIYDEEGDEL 1657
            R++ PA+P+FI +R+LA  LR     + K +     +K    A +  P  F ++ ++V+PF+ AQ VA+  G ++ + D+E  P+ +      D+    +          R+PVV ++GH +HGKTT++D LR   +     +A  E  GITQ+I     +L P                         AT LDTPG   F+RMR++ A+VADAV+L+V+A +GV LQT ESIG  EE GLPAV+ +NK+DLL  E  +++V  +  E+R FVA+QD+ VL +S  TG GLD+LR ++ + ++                   GL   H                                           ++ ++   PE  A G VL+  +    G VL VL+ +G L P   FV+GM+ G VR + D EG E+
Sbjct:   73 RSQPPAVPAFIRVRDLAKALRQPVDKVLKLVVTKNNRKFQLKAKNHPPAEFRSVKHIVLPFRVAQDVAEQFGMQVAYDDVE--PELSDASVGFDERFLGV----------RQPVVAVMGHVDHGKTTLMDTLREQMNTGLKQLAPYEKNGITQKINVCEAALTPD----------------------LKATFLDTPGHFHFFRMRSSAAQVADAVLLIVAADEGVLLQTEESIGAIEEAGLPAVICINKVDLL-GEAGSEQVDSIVDELRSFVALQDSPVLTISGKTGAGLDDLRHTVRELVT-------------------GLADDHK------------------------------------------LDALVG--PEPHAEGLVLESVALKGRGTVLRVLIKQGELSPKQHFVAGMIHGVVRGMSDAEGREV 410
[Close]
BLAST of Ec-28_000120.1 vs. uniprot
Match: A0A225UL88_9STRA (Translation initiation factor IF-2 (Fragment) n=3 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UL88_9STRA)

HSP 1 Score: 177 bits (450), Expect = 4.650e-44
Identity = 138/441 (31.29%), Postives = 211/441 (47.85%), Query Frame = 2 
Query:  362 RTETPAIPSFIEIRELASLLR-----VKPRALFKSMGGYQEKKKHRIALSGVPYAFPNLGNVVVPFQDAQAVAKVLGKEIRFLDIEKKPQRAAILARSDDSRAPLWEKGQPAGQGRRPVVVLLGHFNHGKTTILDALRGPSSG----IADREPGGITQEIRARTVSLEPTSGETAQDTNDDDAAASPRSRSAKVATVLDTPGQEIFYRMRTNGARVADAVVLVVSAVDGVCLQTSESIGCAEELGLPAVVVLNKIDLLPDEVAAQRVKELSAEVREFVAIQDAKVLPLSAHTGFGLDNLRTSLADALSQTFLPKERVHPTMADPENFGLQPSHSETSPDLGIPRVDPDPAPPVGQAGSEVAVAAGVHSAEGGSAGGVEVVMAEAPEGAATGTVLDYTSSAKTGKVLLVLVDRGVLQPGDPFVSGMLWGFVRSIYDEEGDEL 1657
            R++ P IP+FI +R+LA  LR     V  R + K+   +Q K K+       P  F ++ ++V+PF+ AQ VA+    ++ + D+E  P+ +   A  ++    +          R+PV+ ++GH +HGKTT++D LR         IA  E  GITQ+I     +L                       S   AT LDTPG   F+RMR++ A+VADAV+L+V+A +GV LQT ESIG  EE GLPA++ +NK+DLL ++   ++V+ +  E+R FVA+QD+ VL +S  TG GLD+LR ++ + +S           T+AD                                                      + ++   P   A G VL+  +    G VL VL+  G L     FV+GM+ G VRS+ D EG ++
Sbjct:   70 RSQPPVIPAFIRVRDLAKALRQPLDKVLKRTVTKANRRFQLKSKNH-----PPAEFRSVKHIVLPFRVAQEVAETFDIQVAYDDVE--PELSDASADYEEEFVGV----------RQPVIAVMGHVDHGKTTLMDTLRKQMKAGLKQIAPYEKHGITQKINVCEATL----------------------TSDVKATFLDTPGHFHFFRMRSSAAQVADAVLLIVAADEGVLLQTEESIGAIEEAGLPAIICINKVDLLGED-GDKQVENIVDELRSFVALQDSPVLMISGKTGAGLDDLRHTVWELVS-----------TLADDNKL--------------------------------------------------DALIGSKPH--AEGLVLESVALKGRGTVLRVLIKNGELVTKQHFVAGMIHGVVRSMRDAEGHDV 407
[Close]
BLAST of Ec-28_000120.1 vs. uniprot
Match: A0A3R7MXQ2_9STRA (Tr-type G domain-containing protein (Fragment) n=5 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7MXQ2_9STRA)

HSP 1 Score: 176 bits (445), Expect = 8.920e-43
Identity = 148/437 (33.87%), Postives = 207/437 (47.37%), Query Frame = 2 
Query:  362 RTETPAIPSFIEIRELASLLRVKPRALFKSMGGYQEKKKHRIALSGVPYAFPNLGNVVVPFQDAQAVAKVLGKEIRFLDIEKKPQRAAILARSDDSRAPLWEKGQPAGQGRRPVVVLLGHFNHGKTTILDALRGP-SSGI---ADREPGGITQEIRARTVSLEPTSGETAQDTNDDDAAASPRSRSAKVATVLDTPGQEIFYRMRTNGARVADAVVLVVSAVDGVCLQTSESIGCAEELGLPAVVVLNKIDLLPDEVAAQRVKELSAEVREFVAIQDAKVLPLSAHTGFGLDNLRTSLADALSQTFLPKERVHPTMADPENFGLQPSHSETSPDLGIP-RVDPDPAPPVGQAGSEVAVAAGVHSAEGGSAGGVEVVMAEAPEGAATGTVLDYTSSAKTGKVLLVLVDRGVLQPGDPFVSGMLWGFVRSIYDEEGDEL 1657
            R +  AIP++I +R+LA  +R     + K +     +     A    P  F  +  +V+PF+ AQ VA     ++ + D+E           SD+S A     G      R+PV+ ++GH +HGKTT++D LR   +SG+   A  E  GITQ+I     +L P                         AT LDTPG   F+RMR++ A+VADAVVLVV+A +GV LQT ESIG  EE GLPAVV +NKIDLL D   A +V  +  E+R FVA+QD+ +L +S  TG GLD+LR ++++ ++                              DL I  ++D              AVA    SAE                    G VL+  +    G VL VL+  GVL P D FV+ M+ G VR + D EG E+
Sbjct:   40 RNQPRAIPAYIRVRDLAKAIRQPLDKVLKRVVTKSNRVFRLNAKDHPPAEFRGVKQIVLPFRIAQEVATEFRVQVAYDDVEP--------VFSDESGADKESWGV-----RQPVIAVMGHVDHGKTTLMDTLRKQMNSGLRQLAPYEKHGITQKINVCEAALTPDVR----------------------ATFLDTPGHFHFFRMRSSAAQVADAVVLVVAADEGVLLQTEESIGAIEESGLPAVVCINKIDLLGDGGEA-KVDGIVDELRSFVALQDSPILTISGKTGAGLDDLRHTVSELVA------------------------------DLAIDHKLD--------------AVANPTTSAE--------------------GLVLESVALKGRGTVLRVLIKHGVLAPKDHFVANMIHGVVRGMSDAEGREV 376
[Close]
BLAST of Ec-28_000120.1 vs. uniprot
Match: A0A6A4FLN7_9STRA (Tr-type G domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A4FLN7_9STRA)

HSP 1 Score: 175 bits (444), Expect = 2.290e-42
Identity = 145/442 (32.81%), Postives = 212/442 (47.96%), Query Frame = 2 
Query:  362 RTETPAIPSFIEIRELASLLR-----VKPRALFKSMGGYQEKKKHRIALSGVPYAFPNLGNVVVPFQDAQAVAKVLGKEIRFLDIEKKPQRAAILARSDDSRAPLWEKGQPAGQG-RRPVVVLLGHFNHGKTTILDALRGPSSG----IADREPGGITQEIRARTVSLEPTSGETAQDTNDDDAAASPRSRSAKVATVLDTPGQEIFYRMRTNGARVADAVVLVVSAVDGVCLQTSESIGCAEELGLPAVVVLNKIDLLPDEVAAQRVKELSAEVREFVAIQDAKVLPLSAHTGFGLDNLRTSLADALSQTFLPKERVHPTMADPENFGLQPSHSETSPDLGIPRVDPDPAPPVGQAGSEVAVAAGVHSAEGGSAGGVEVVMAEAPEGAATGTVLDYTSSAKTGKVLLVLVDRGVLQPGDPFVSGMLWGFVRSIYDEEGDEL 1657
            R +  AIP+FI +R+LA  +R     V  R + KS   +Q K K        P  F ++ ++V+PF+ AQ VA+  G ++ + D+E  PQ   I A SD           P   G R+PV+ ++GH +HGKTT++D LR         IA  E  GITQ+I     +L P                         AT LDTPG   F+RMR++ A+VADAV+L+V+A +GV LQT ESIG  EE GLPAV+ +NK+DLL +E   ++V+++  E+R F+A+QD+ VL +S  TG GLD+L+ ++   ++            +AD +                                                     +V ++ P   A G VL+  +    G VL VL+  G L     FV+GM+ G VRS+ D EG E+
Sbjct:   82 RAQPRAIPAFIRVRDLAKAIRQPLDKVLKRVVTKSNRRFQLKAKDH-----PPAEFRSVKHIVLPFRVAQEVAEQFGVQVAYDDVE--PQ--LIDAASD----------VPELLGVRQPVIAVMGHVDHGKTTLMDTLRHQMKAGLKQIAPFEKHGITQKINVCEAALTPD----------------------VKATFLDTPGHFHFFRMRSSAAQVADAVLLIVAADEGVLLQTEESIGAIEEAGLPAVICINKVDLLGEE-GDEQVEKIVDELRSFLALQDSPVLTISGKTGAGLDDLKHTVWGLVAG-----------LADEQRLDA-------------------------------------------------MVGSDTP---AQGLVLESVALKGRGTVLRVLIKNGELAAKQHFVAGMIHGVVRSMRDAEGREV 418
[Close]
BLAST of Ec-28_000120.1 vs. uniprot
Match: A0A3M6VJ16_9STRA (Tr-type G domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VJ16_9STRA)

HSP 1 Score: 174 bits (441), Expect = 3.950e-42
Identity = 137/437 (31.35%), Postives = 206/437 (47.14%), Query Frame = 2 
Query:  359 VRTETPAIPSFIEIRELASLLRVKPRALFKSMGGYQEKKKHRIALSGVPYAFPNLGNVVVPFQDAQAVAKVLGKEIRFLDIEKKPQRAAILARSDDSRAPLWEKGQPAGQGRRPVVVLLGHFNHGKTTILDALRGPSSG----IADREPGGITQEIRARTVSLEPTSGETAQDTNDDDAAASPRSRSAKVATVLDTPGQEIFYRMRTNGARVADAVVLVVSAVDGVCLQTSESIGCAEELGLPAVVVLNKIDLLPDEVAAQRVKELSAEVREFVAIQDAKVLPLSAHTGFGLDNLRTSLADALSQTFLPKERVHPTMADPENFGLQPSHSETSPDLGIPRVDPDPAPPVGQAGSEVAVAAGVHSAEGGSAGGVEVVMAEAPEGAATGTVLDYTSSAKTGKVLLVLVDRGVLQPGDPFVSGMLWGFVRSIYDEEGDEL 1657
            +R + PAIP+FI IR LA  LR     + K       ++ +    +  P  F  +  +V+PF+ AQ VA+  G +I + D+E +    +++  SD+    L          R+PV+ ++GH +HGKTT++D LR  +      IA  E  G+TQ+I      L                      +  K AT LDTPG   F+RMRT+ A+VADAV+L+V+A +GV LQT ESIG  EE GLPAV+ +NK+DL  ++ + ++V  +  E+R FVA+Q++ VL +S  TG GLD+LR ++   +S            +A  +  G                        VG                              P+  A G VL+  +    G VL VL+  G L     F++GM+ G VRS+ D EG ++
Sbjct:   63 MRNQPPAIPAFIRIRNLAKALRQPLDKVLKHTVTKSNRRFYLKTKNHQPAEFKGVKQIVLPFRVAQEVAEHFGIQIAYDDVEPELSEPSVV--SDEEILGL----------RQPVIAVMGHVDHGKTTLMDTLRKQTEASLKQIAPLEKHGMTQKINVCEAIL---------------------MKDVK-ATFLDTPGHFHFFRMRTSAAQVADAVLLIVAADEGVLLQTEESIGAIEEAGLPAVICINKVDLFGED-SKRQVDSIVNELRSFVALQNSPVLSISGKTGAGLDDLRHTVWKLVSG-----------LASDQRLGAL----------------------VG------------------------------PQTHAEGLVLESVAVKGRGTVLRVLIKNGKLAAKQHFIAGMIHGVVRSMSDAEGRDV 401
The following BLAST results are available for this feature:
BLAST of Ec-28_000120.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L7S8_9PHAE0.000e+090.22Tr-type G domain-containing protein n=2 Tax=Ectoca... [more]
A0A835Z5U4_9STRA9.490e-7431.14Tr-type G domain-containing protein n=1 Tax=Tribon... [more]
A0A662XFN4_9STRA3.240e-4730.89Tr-type G domain-containing protein n=1 Tax=Nothop... [more]
M4BGI0_HYAAE4.040e-4631.20Tr-type G domain-containing protein n=1 Tax=Hyalop... [more]
A0A662Y5I4_9STRA2.120e-4531.03Tr-type G domain-containing protein n=1 Tax=Nothop... [more]
H3GSC9_PHYRM4.810e-4531.88Tr-type G domain-containing protein n=1 Tax=Phytop... [more]
A0A225UL88_9STRA4.650e-4431.29Translation initiation factor IF-2 (Fragment) n=3 ... [more]
A0A3R7MXQ2_9STRA8.920e-4333.87Tr-type G domain-containing protein (Fragment) n=5... [more]
A0A6A4FLN7_9STRA2.290e-4232.81Tr-type G domain-containing protein n=5 Tax=Phytop... [more]
A0A3M6VJ16_9STRA3.950e-4231.35Tr-type G domain-containing protein n=2 Tax=Perono... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:144764..156669 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score1641.7
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D7FIF9
Length2969
KEGG koko:K02519
Hectar predicted targeting categorymitochondrion
Gene idEc-28_000120.1
EggNOG free text desc.translation initiation factor activity
EggNOG OGsCOG0532@1,KOG1145@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03012,ko03029
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_000120Ec-28_000120Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_28 144764..156669 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000120.1Ec-28_000120.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_28 145118..156619 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000120.1.9Ec-28_000120.1.9Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 144764..145957 -
Ec-28_000120.1.8Ec-28_000120.1.8Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 146924..147027 -
Ec-28_000120.1.7Ec-28_000120.1.7Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 147389..147506 -
Ec-28_000120.1.6Ec-28_000120.1.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 147654..148076 -
Ec-28_000120.1.5Ec-28_000120.1.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 148738..148856 -
Ec-28_000120.1.4Ec-28_000120.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 149303..149529 -
Ec-28_000120.1.3Ec-28_000120.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 150411..150646 -
Ec-28_000120.1.2Ec-28_000120.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 153606..153750 -
Ec-28_000120.1.1Ec-28_000120.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 156267..156669 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_0001203UTR:Ec-28_000120.1Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_28 144764..145117 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000120.1CDS:Ec-28_000120.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_28 145118..145957 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_0001205UTR:Ec-28_000120.1Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_28 156620..156669 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-28_000120.1 ID=Ec-28_000120.1|Name=Ec-28_000120.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=855bp
MLLARRRLLPSGRGRLAAPCCKLWLPERRDAEASHVAQASREIRAARHLP
RRRSCCIFTGTAGALSHRQLECGCAFLSKASGGGLRLLHGTSRAAAKAKL
GHGVRTETPAIPSFIEIRELASLLRVKPRALFKSMGGYQEKKKHRIALSG
VPYAFPNLGNVVVPFQDAQAVAKVLGKEIRFLDIEKKPQRAAILARSDDS
RAPLWEKGQPAGQGRRPVVVLLGHFNHGKTTILDALRGPSSGIADREPGG
ITQEIRARTVSLEPTSGETAQDTNDDDAAASPRSRSAKVATVLDTPGQEI
FYRMRTNGARVADAVVLVVSAVDGVCLQTSESIGCAEELGLPAVVVLNKI
DLLPDEVAAQRVKELSAEVREFVAIQDAKVLPLSAHTGFGLDNLRTSLAD
ALSQTFLPKERVHPTMADPENFGLQPSHSETSPDLGIPRVDPDPAPPVGQ
AGSEVAVAAGVHSAEGGSAGGVEVVMAEAPEGAATGTVLDYTSSAKTGKV
LLVLVDRGVLQPGDPFVSGMLWGFVRSIYDEEGDELLENAGSGVAAKVVI
VPRTRVSNAPLGEPFRVLTKEAAEKVAHVRLLARTMDNFIDHNKLDREFA
HLLGGDEDDNDQSYGGSDEDDQPGRPAEQPDGTGDDVDYSETTLRSTARS
PEPSNRRWSNLEQEEELAPENMPVTIVVKADNANTLASVLDALGDWGDVE
NPTENVGEQLAAEASDSNPEGVLERVRRRQPQEWGEGDLQHKQRRRLLVS
VAHSGVGAVTSSDVRLARDCECPVFAHNVRTDTSATRELKRVGGGVVPAL
PEGGAVAVGEEVSVGIGGQEGFIGRAGEGRECVVVSETVGELLGEIERFV
LRVR*
back to top

spliced messenger RNA

>Ec-28_000120.1 ID=Ec-28_000120.1|Name=Ec-28_000120.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=2969bp|location=Sequence derived from alignment at chr_28:144764..156669- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
AGAGAGAGGAGGGAAGTTTGACAGCAAGACTGCTGTCCAACGCTCGCAGC
ATGTTGTTGGCTAGGCGGAGGCTCCTTCCGAGTGGTCGTGGAAGATTGGC
GGCCCCATGTTGCAAGCTGTGGCTGCCGGAACGCCGTGATGCCGAAGCGT
CTCATGTGGCCCAAGCGTCACGCGAGATTCGTGCTGCCAGGCACTTGCCG
AGGAGGCGCAGCTGCTGCATATTTACTGGCACTGCTGGTGCGTTATCTCA
CCGGCAGTTAGAATGCGGGTGCGCGTTCTTGAGCAAGGCAAGTGGTGGGG
GTTTAAGGTTGTTGCATGGTACCAGCAGAGCTGCCGCGAAGGCGAAGCTA
GGGCACGGAGTGAGGACGGAGACACCCGCTATCCCTTCGTTCATCGAGAT
AAGGGAGTTGGCGAGCCTCCTGCGGGTCAAACCAAGGGCGCTTTTCAAGT
CAATGGGCGGCTATCAGGAGAAGAAAAAGCACAGGATCGCCCTCAGCGGG
GTGCCCTACGCGTTTCCAAACCTTGGGAACGTGGTCGTTCCGTTTCAGGA
CGCGCAAGCAGTGGCGAAGGTCTTAGGCAAAGAAATACGGTTCCTCGACA
TCGAAAAAAAGCCGCAGCGTGCCGCTATCCTAGCTCGATCCGACGACTCC
CGGGCACCTTTGTGGGAAAAAGGGCAACCCGCTGGTCAGGGGCGCAGACC
TGTCGTCGTGCTCTTGGGGCACTTCAACCACGGGAAGACGACAATCCTCG
ACGCGCTTCGAGGGCCCAGCAGTGGCATCGCTGATCGAGAACCTGGAGGC
ATCACCCAGGAGATACGAGCGCGCACTGTTTCCCTGGAACCAACGTCGGG
GGAGACGGCTCAGGATACGAACGATGACGACGCTGCCGCATCTCCCCGTT
CGAGGTCGGCCAAGGTGGCGACGGTTCTTGACACCCCTGGCCAGGAAATA
TTTTACCGGATGAGAACGAACGGGGCAAGAGTTGCGGACGCAGTGGTTCT
GGTTGTTTCAGCGGTGGACGGCGTTTGCCTCCAGACGTCGGAGAGCATCG
GCTGTGCGGAGGAGCTAGGACTGCCGGCAGTGGTGGTCCTGAACAAGATT
GACCTCTTGCCGGACGAGGTGGCGGCACAGAGAGTGAAGGAACTATCGGC
AGAAGTGAGAGAGTTCGTAGCCATCCAAGACGCCAAGGTCCTCCCGCTCT
CCGCGCACACAGGCTTCGGCCTGGACAACCTCCGAACTAGCCTGGCGGAT
GCTCTAAGCCAAACCTTCCTCCCTAAGGAACGCGTCCACCCAACGATGGC
AGATCCGGAGAATTTCGGGCTACAACCCAGCCACAGCGAAACCTCTCCCG
ATTTGGGGATTCCTAGGGTTGATCCCGATCCTGCACCACCTGTAGGGCAG
GCTGGATCCGAGGTTGCTGTTGCGGCGGGTGTTCACAGTGCCGAAGGAGG
CTCGGCAGGGGGAGTCGAAGTCGTCATGGCTGAAGCCCCGGAGGGCGCAG
CTACCGGAACTGTGCTTGACTACACTAGTAGCGCCAAGACGGGCAAGGTG
TTGCTGGTACTGGTGGATAGAGGAGTTCTTCAGCCTGGTGATCCATTCGT
CTCGGGGATGTTGTGGGGCTTTGTACGCTCAATCTACGACGAGGAGGGCG
ACGAGCTGCTCGAAAATGCAGGTTCTGGGGTGGCAGCGAAAGTGGTAATC
GTACCTCGAACTCGTGTGTCCAATGCTCCTTTGGGGGAACCGTTTCGGGT
CTTGACAAAGGAGGCTGCCGAGAAGGTAGCCCACGTGCGCCTGCTGGCCC
GCACTATGGACAACTTCATCGACCATAACAAGCTGGACAGAGAATTCGCA
CACCTCTTGGGCGGGGACGAGGATGACAATGATCAATCTTATGGCGGGAG
CGACGAGGACGATCAACCTGGACGCCCGGCGGAACAGCCTGACGGAACGG
GTGATGACGTAGATTACTCGGAGACAACACTGAGAAGCACAGCACGGTCG
CCCGAACCGTCCAATCGGCGGTGGAGCAACCTCGAACAAGAAGAGGAATT
AGCTCCGGAGAACATGCCGGTGACCATCGTGGTAAAGGCCGACAACGCCA
ACACCCTCGCCAGCGTGCTTGACGCGCTTGGAGACTGGGGAGACGTCGAA
AACCCCACGGAAAACGTTGGGGAACAACTCGCCGCGGAAGCGTCCGATAG
CAATCCTGAAGGAGTTTTGGAGAGAGTTCGACGAAGGCAGCCGCAGGAGT
GGGGGGAAGGTGACCTGCAGCACAAGCAGCGCCGGAGGTTGCTTGTCTCC
GTAGCTCACTCGGGTGTCGGGGCCGTGACGTCGTCTGACGTACGTCTCGC
AAGAGACTGCGAATGTCCGGTGTTTGCTCACAACGTCAGGACCGACACCT
CCGCCACGAGGGAGCTGAAACGAGTTGGCGGGGGTGTAGTGCCGGCCTTG
CCAGAGGGGGGGGCGGTGGCGGTTGGTGAGGAGGTGAGCGTAGGCATTGG
AGGGCAGGAAGGGTTTATCGGGAGGGCGGGGGAGGGGAGAGAGTGCGTCG
TGGTGTCGGAAACGGTAGGGGAGCTACTCGGCGAGATCGAACGGTTTGTG
TTGCGCGTCAGATAGTACCGGTACAACAGCGGAGAGGGGCGGTTCACAGT
TTGTGTGTCTAACCCCGCGATTAGGTCTCTGCTCAGTAAGTTTTGGTGCC
TTCTCACGTCCGCGCCGGTCTAGATTCATTCACGGAGTATGCTAGGCGTA
TCCGCCAAGATAACGCAGCTGGCGCTGTGGGCCGATGTGCCAAACGTATG
CAGCTCTCGTCGGTATCGGGGCCGCAGATAACGCGGGTGTGCGGGAAATT
CGTGCACTGCCCATGAAGTTCATACACAGATTTTGTTTTGTGTCTCTCTC
ATCTTGTTCTTTTGTCGAAAATATCTCCCCAGTTGTATGGGAAGAGGCAC
GCGGGGGGGGGGGCACGCG
back to top

protein sequence of Ec-28_000120.1

>Ec-28_000120.1 ID=Ec-28_000120.1|Name=Ec-28_000120.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=855bp
MLLARRRLLPSGRGRLAAPCCKLWLPERRDAEASHVAQASREIRAARHLP
RRRSCCIFTGTAGALSHRQLECGCAFLSKASGGGLRLLHGTSRAAAKAKL
GHGVRTETPAIPSFIEIRELASLLRVKPRALFKSMGGYQEKKKHRIALSG
VPYAFPNLGNVVVPFQDAQAVAKVLGKEIRFLDIEKKPQRAAILARSDDS
RAPLWEKGQPAGQGRRPVVVLLGHFNHGKTTILDALRGPSSGIADREPGG
ITQEIRARTVSLEPTSGETAQDTNDDDAAASPRSRSAKVATVLDTPGQEI
FYRMRTNGARVADAVVLVVSAVDGVCLQTSESIGCAEELGLPAVVVLNKI
DLLPDEVAAQRVKELSAEVREFVAIQDAKVLPLSAHTGFGLDNLRTSLAD
ALSQTFLPKERVHPTMADPENFGLQPSHSETSPDLGIPRVDPDPAPPVGQ
AGSEVAVAAGVHSAEGGSAGGVEVVMAEAPEGAATGTVLDYTSSAKTGKV
LLVLVDRGVLQPGDPFVSGMLWGFVRSIYDEEGDELLENAGSGVAAKVVI
VPRTRVSNAPLGEPFRVLTKEAAEKVAHVRLLARTMDNFIDHNKLDREFA
HLLGGDEDDNDQSYGGSDEDDQPGRPAEQPDGTGDDVDYSETTLRSTARS
PEPSNRRWSNLEQEEELAPENMPVTIVVKADNANTLASVLDALGDWGDVE
NPTENVGEQLAAEASDSNPEGVLERVRRRQPQEWGEGDLQHKQRRRLLVS
VAHSGVGAVTSSDVRLARDCECPVFAHNVRTDTSATRELKRVGGGVVPAL
PEGGAVAVGEEVSVGIGGQEGFIGRAGEGRECVVVSETVGELLGEIERFV
LRVR*
back to top

mRNA from alignment at chr_28:144764..156669-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-28_000120.1 ID=Ec-28_000120.1|Name=Ec-28_000120.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=11906bp|location=Sequence derived from alignment at chr_28:144764..156669- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
AGAGAGAGGAGGGAAGTTTGACAGCAAGACTGCTGTCCAACGCTCGCAGC
ATGTTGTTGGCTAGGCGGAGGCTCCTTCCGAGTGGTCGTGGAAGATTGGC
GGCCCCATGTTGCAAGCTGTGGCTGCCGGAACGCCGTGATGCCGAAGCGT
CTCATGTGGCCCAAGCGTCACGCGAGATTCGTGCTGCCAGGCACTTGCCG
AGGAGGCGCAGCTGCTGCATATTTACTGGCACTGCTGGTGCGTTATCTCA
CCGGCAGTTAGAATGCGGGTGCGCGTTCTTGAGCAAGGCAAGTGGTGGGG
GTTTAAGGTTGTTGCATGGTACCAGCAGAGCTGCCGCGAAGGCGAAGCTA
GGGCACGGAGTGAGGACGGAGACACCCGCTATCCCTTCGTTCATCGAGAT
AAGGTGAGTTTGAGGAGGAGGTTAGCCCATTTATCCTGCTTGTTGTGTGC
CTATTCATAGCACAAGTGTAGTGGCCAGCAGACTGCAGATTCTCCCCGCT
CGCACACCAGAGCGTGCGTGTGTGTACCCCCACAACACAGGGGACAGGGT
TCTCTAGGGAACTCGGGGTATTTCTCTGATTGCCGAAAACGCAGAATATC
GTTCCTGGAAACACTTGCGACCCCCAAAGTTCCTCCTTTTCGGTGATCCC
GACACGGGATAGTTGTAAGGAGGATTCACTGAAGTTGTCCAACAAATCAT
GTGGAACACGGGCTCGTCGGTGGCAAATCAGGACGTGGCGGGCGGATGTG
TGTGTTCAATTCGGGCATGTCGCTGCCACAGGTGCTGCCTGCGAACGGTT
CAAGCGATAGGACATGCCACCATCAGGTTCTCGCATGCGAAAAAACGGCA
GCGGATGCTCGTGTGGCCGTTGTATTGGAGAAGAAAGAGTGCCAAGAAGA
CGGCAAGCTTCCGTTGACCGAAACTCAAGAATCAACCCTTTCCAGAGCAC
TCTCGAGGGTGCGGATTGCACGACGAGCACAGCTCGCTCTAACTGACACA
ATGTAGACTATGGGCGCTCTCGTCAATATCTTCAAATCTCACACCACCCC
TCTTCCTGCACATCACCCCTATTTCTTCCTCTTTCGGTTGTGTTTGTTGG
CTCCGAGTGCCTGCGGGCCGCACGAAATGTTTTGTGTTCCATGTCTGAAT
ATTGTTGCATGCATCACGGTTATGGGACACACGACGTGGAACAGGGACCA
GGGAGTTCTGAGTTCCCTGTTCCCTGATCCCTGATCCTTTTTTTGTCTCG
AGGGTTAGGGTGGGTCCTGCCACCCGAGAACTCAATCGAGTTGGCTCTAC
TCGAACGCTCATGGCGATGCATCGAAATCGAAAATGGAAACTAACATCGA
TGACACAATAAACGCCTGAAAAAGTGTCCGTTGCAATGATTCACACCGTG
GCCATGAGAGCCAGGGCATCCCAGACAACGAACGATAGTGCCGGATGTCG
GTCATGATCAGGCGGGTTGAAAAATGTTGGTCTCGGATCGGTACGCTGCG
CACACACCGAGCAATGTGTGATTGAATACTCTGGTTTGAAGGAGGAAAGC
TGGAAGTGATGCCGTTGGCAGAAAATAATCTCCCATTGTAGAGCAAATCT
CGCTCAAAGGAAGTATACCGTGCTCTGCTGCATGTCAGCTTTCTGCCATG
GTATCGCTTGCATCACCAAGCAGTCTGTAGGTGGCTAGATGGGTAGCGAT
ATGAAGGCATCTCCGGCTTTCAGAGAGTCTGGCAAGCAGCTGACAAGCAA
CTTGATGTTCCCGTTCACCCTTTCGATGTTCCATTTCGATCTATTCAGTT
TATCGCTTTGATTTTTCCATATCGATTCGCTCTCGGAACACAATCTTCCA
TATCGAAATTCCGGCGGCGGAAAGAGGGTCAGTTGTCCAATCAGTGGCAT
TTTCGATTTTCGATTTTCGATTTTCGATGGAGCACTGCGGTGACAAGACC
CACCCTTAGTACACGCCCTCGCATGGAAACACCTAGCTGTGGGTGGTGAC
GGAGAACCACCACCCAAACCTCTGATTGGTCGATGGTGCCTGCGCGCGGC
CGTCCTATCCTGCAGACTACACCAAGTGGCATGTACGTCACCGTGACCCT
CGTGACACCCTATTACTTGAGGGTTGGGGTTGAGGTTAGGGTTGGTTGGA
TCGGATTGGGTTGGGTTGCTGAGTGTTGAGAGTACCTTTTCTCAGAGTCA
GAGTCCCTGAAGTGGTGATTAGCCGTTCACAAGCGGAGGTATTTGCTCTC
TTGACATGTGGCGAGGAATAGCCAAGCGTGGCCGAGGTTACTCGGAGGTG
CTAGTTTCAAGAAAGGTGGAACTGAGCGAGAGAGGGCCCTCGTGGGCATC
GCCACATCTCCGAGATTCACTGGAATGGTCACTGTATTCGATGAATCTTT
CTTGAAAAACATCCTCGGAGCAGTAGCATAGGTATTGTCCGTGGTCTCCA
GATCTTAACTAGTCGCATGTGCGTCCCTACCCCTAGGAAGATACCTATAT
CGTGGTTTCGACGGAGTAATAGTTTGGGTGATGATTGTTGGTCACGACCC
GTGGGTTGTAGATTGGCGCTCCCCGCTCACACGCCTTTCTCACGGCGTGC
GGACCCCAATGTGTTGTTGAGGGTACGTTCTTATTGACAAAAAACGCAAC
GTTACTTCGCACAATAGGGGGCGACAGGAAGTCGTAGAGGTATACACAGC
TTATCTCTGAGATGTATCGGTTTTACATTAGAAACGCCCCGGAGATACCC
AGCTTTCTATTCCACGATGTGCAGACGTAAAGGCGACCCAGCCATCCCTA
CGACGGATGTTCAGACGAATCCTCAACATACAACAGCGTCTTTCACGGTC
GGTGAAATGCTGTAAATGTCCCGCACTGACTCCCTGCGCTTTCTTCGGAC
CTACGGCACGACTTTCTAGGGAGTTGGCGAGCCTCCTGCGGGTCAAACCA
AGGGCGCTTTTCAAGTCAATGGGCGGCTATCAGGAGAAGAAAAAGCACAG
GATCGCCCTCAGCGGGGTGCCCTACGCGTTTCCAAACCTTGGGAACGTGG
TCGTTCCGTTTCAGGTGAAACCGACCCCTCTTTTCGACCTCGGACCTTTG
ACGCCAAAAGGGGGGTGGTCGTAAAATAACGATTGCTGATATTGCTGCCA
TGTTGGTGGCGTATTTTCGTAACGCATTGCCGGTTAATACCGCAGTGGAA
CGTTAAGTACACACCGTTGTCTAGCGGCGGCGCGCTTAGTTGGTCTGGGT
CACCTGAATGAACAGCGTGCACTGCACTTCATTGCGCACTGCTGCTGCCG
TACAAGCCTTTTGCGCACTCTTCTTTCGAAATGCTGGTTTCTATGTAGTG
ACTAGTGACGAATGTGTTGACAGTGTAGAATGACGCTGCAAATACATATC
GGTGTTAGCATTAGTGGGAAAGGACGCAACAGGGTACTCTGGTCGAAAAG
CGACTCGGCTGGGTACTATTCAGCAGCGTGAAATGAACCCAGATGATTGG
TCAACGCCCACTTTCACCCCGCCGCGTCCTAGAAAGCGCGGGTGTACCCT
GCCGTGGCCTTTTTTCTCCGGCGTTGTGCCGTGATTTCGGAAATGTATCC
TGACCTGACGGAAAATGAGACCCTTTCCTCAACCGTTTCCTCCGCAGGAA
TCCTTTCCTAATCATGGGATACCAAACAGCGACTCTTCCAGCCCAAAAAC
AACCATGGCACTGGGCAGAAATCAATCAGGACGGAGTTCCTCCCCTGCAA
TACAACACCAACCATCAACTCTTCCCGCTCAAAACAGGCGATCGCCAGCA
CACACCAGCACAATTCCGTTTGGGAACGTGCGGGGTGTTACGCGCGTACA
TATTTGCATACATAGTCCATTTCGTGATGTTTGATGTACATGCTTGGCGT
TGGATGTGGACAATATACGGGTATCTTTGTACGCCACTCCTTCCACCGAA
GCTCCTTCTCCGCTACCCCCTCTTTCCTGATGGTTGATAAATAACGGCGT
GTGTGCGTGCTTGTGTGCTGTGTTCTTGTTCTTAACCCTTTTGGGTCTAC
AGGCGTCCTGACAGATCATTGATTGATGATTGCAAATGCTGGTGTGGTGG
CATGCCATGGAGTTGCCGCCCTAATATCCCTCCACGCCAGGTGTTGGCAA
GTCCGTAGGTTTATGCATCGACCGCGCTAGCCGGCTGTCAAATGAAAAGA
CGTCTGTCTCAGTGCGGTTGAAAACAAAAAGTTCTTCTAAAGGCTATGAT
CTGGGACCCCGTGAGTGCGTTGTGTTGTGTTGTGTTTTGATCTCAATCGT
GGTGTGCGTGTCTCGCTTGAATTATGATCCATCGCGCTTTCCAGCCGACC
AATGAATAAGACATCAGGCTCCAGCGGGATGCAAAACAAACGCGCACACT
TCTCTCTACCGACAAGGAGGGTGCAGGAGTTGGAGTAAGAGGGTGTTTGC
GGACAGGTCTTCGATTCTGGTCTTGGAAATCGGGAGCAAGTTCGAAAGCA
AGACCTGCATTTGGTATGAAAACTGCTTGCGAAGACCGGACTGCCTCTCT
CTGGTCTTCGTTTTGACTCGTTTCAATAAATAATACAGTGTGACGTCAAG
CGCGTGACCATTTGTCCTTTTTTTGTGTGCTCACGCATCGTTCGTTCAGA
CGTGCCCTGAGGAACCCACGCCCATGCAGCTCTACCAAACTGCGCGTTCA
AACAAACCTCTCTCTAATACCGTGAGCCATCGAACTGAACATCTCTATTG
AAAGCTTGCTAGTTGGCTCGTTCCTCTGTTGCGCCCAAAGAGTTCGAAAG
AGGCACCACACTGACTGCTTGCCGGCTCCTGTGACATTTTTTCTAGGCAC
ACGCCACATCAATCACCCTTTCGATCGCCACGGCACGTTTTGGCTGAACT
ACCTGCTTCGATATCTGTTTGCTGGTGGTAGGCTGACCCTGAGAGGGGTA
GCCTGCTGCGCAACCCGTGAAATTTTATCCTTCCGAGCTTGTGTCTGTTT
GTCGTTTGAAAACATTTTTAACCATCATCACAACAGAGAGAGAGCGTGTG
TTGCGGGGTACTATGCCAAGGAGGAACATTCGTGTGTGTGTCTGCCACAT
GTTTGGGCTCCCTCTGGTACACACACACGGTTGTTTGTGTCGATTGCAGT
ACGCATGAAGCCCACGGGGTATCTCACGGGGCGCTCGGCCAACCAGCAAC
TGTTCCTAAAGACCAAAATTACCAAGACCAAATTGGAGCTTTCTGCGGTC
TTTGGGGGCAGTTCATAAAAGCTAAAGATCAAATTCCTAAAGATCCAGTG
TACTTCGGTCGTCGGGGTGATAGAAAAGACCAACATGAAACCAAAATTCG
ATCTTCGCAAACTCCGTAAGAAGACTCGATGCGTGTGCGCTATTCTTTCA
TCCCGTCTCTGCGGCCACGAGCTCGCCGCCACCACACCACTGCATATCGG
CACATGCATGCATCTCAACCATGCTGGAGCGGTATCGCGTTCTAAGCGTG
ACCCATGTCTCGCATATTGTCTACCTCACATAGTCTACATACTCTATGTT
CGGTTGCTTTCGAAATTGTGCTGGAGTTTACCAGCCTTTGTTTCTTTAGA
GCGGGAAGAGTTGATGGTTGGTTCTGTTTTGCACGGGCGGCAGTAGTGCT
GATGGCTTGGCCGAACGCAATGGTTGACATGTCGGAATACCATTTCTCGG
AACATTCCCTTGGGTAGGTGCAGCTCGTGCACAGGTATTCAGCGTACAGT
AGCCTAGCGCTAACCGTAGACAGCAACCTAGCCCTTACCCCCTCCTGCGC
CGCGGCTCAGGTTGCATGTAGAGCAACCTAGCGTTTCGCCTGTCCCGCCT
TAGGCTCACCCTAGCTTTTCACCGTTCAACAACCTAGCGCTAAGATAATG
TGTGTCAAGAACAATGACATGTACATACCTTCCAACGTTTTGGCTCGGTT
GAATGCCGCAAACACCCTTCCAAAGTATCGACGATGACCACAACCGCCGC
CAATATTGAACCCTGCCTACCAGGACGCGCAAGCAGTGGCGAAGGTCTTA
GGCAAAGAAATACGGTTCCTCGACATCGAAAAAAAGCCGCAGCGTGCCGC
TATCCTAGCTCGATCCGACGACTCCCGGGCACCTTTGTGGGAAAAAGGGC
AACCCGCTGGTCAGGGGCGCAGACCTGTCGTCGTGCTCTTGGGGCACTTC
AACCACGGGAAGACGACAATCCTCGACGCGCTTCGAGGGCCCAGCAGTGG
CATCGCTGAGTGAGTCTGTAACATTTTCGTCAATGCGGCCCTTGTTCGCG
GTCACGCCTTCGATGTAGTGTTTCGAGCTATTCCGTGGCACGGCTACAAG
CCACCGGCAACGACGTGGACCTAGCTAGGTTACCCTCGGTACCGCTTCGC
CTTCTCTTGTCTCACCCGATGCCAGTACGAAATTGCTCAGTAATTGGTCG
ACTTTCACACGTCTATCCCTTTTTCAACAGCTGATGTTTCATGTGCAAAT
TCTCCGAGATTTGTCCGACGATGAACACCCTCGCCCTCAGTACAGGGTGT
GGAGGTGGAACAGATGCATGGAGGTCTTGCTTCGTGATACACGTGGGACA
AAGTTTGACTTGAGGGTGTGGTGTAGCTGATCAGCATACCAAGAGGTGTT
GGCGTCGAATGTATGGCTTCAGTTTTTATTTGCGGTCGTATGTGTCAGAC
GGAACAATTACCCGATGAGGGCAGAAATGTGATACGATTGGCAGGCCGGA
GAGATGTGAGCAAGGCTGATTCACACACGACCCACCAAATATCGTATTGT
GTTCCCACAAGGTGTCATGGGGTCTGTGAGCATGCGTTTAATCGTGAGAT
CGGAAAATCAGCAATGTTTTATTCCGCTTTGTGAAGGCTCGTGATGCAGT
CACCAAAGTTCATGAAGTTCGTATTACAAGAAGGTTTCAAAGCATTCCAG
TTCTCATGTAGTGGACTTGGCTACGGGGCCAGCTGCTAATTGGGGGAGCA
AGTAGCCCCGCCTTGCGAGCGACTGGCTTTGCGTGTGTTTTAAGCGGGCA
AGCACATATGTATACATTTACGCAAGGGTGACCTTGACTCCGCACAAAGC
AGCGTTGATTGACCCTACCGTACCCTCCTTCACTTGCCAGTCGAGAACCT
GGAGGCATCACCCAGGAGATACGAGCGCGCACTGTTTCCCTGGAACCAAC
GTCGGGGGAGACGGCTCAGGATACGAACGATGACGACGCTGCCGCATCTC
CCCGTTCGAGGTCGGCCAAGGTGGCGACGGTTCTTGACACCCCTGGCCAG
GAAATATTTTACCGGATGAGAACGAACGGGGCAAGAGTTGCGGACGCAGT
GGTTCTGGTTGTTTCAGGTGCAGTTGTGGATATGAGCTCCCTATCACTTC
TGGAAGAAAATTTGATGCCGGTGTTCAATTTCGGTACAATTGCATGCCTT
TCACAGGCCATCATCGTGGCAACTCACCCGACGAGAGGCACGAGTTCAAT
GCGGCTTGCATAAACCCGCGCACTCATTTAGAGGGGGGACATGAACTCCT
TGTCTTATCAGGCTTGGAACGAAGTACAAGAATGGACACGGCTGTGATTC
TTTGGGGAAGAACGGATTGTTGCTTCCTTGTGATGCGGCGGCGGCTTGCT
GTAGCTCCCCGGGCCTACACAGGAATGTTTTTAAGACCTTCCCGACGCAG
TAAATAACACATGTGCACGCGTAGGTACACGCATCTTTGCTCAGAAATTC
CTCATCTCGATGGCCTTGTAGTTGCAATTCGCGCTAATTTCATGTTGGTT
TTTGTTTCGGCAGCGGTGGACGGCGTTTGCCTCCAGACGTCGGAGAGCAT
CGGCTGTGCGGAGGAGCTAGGACTGCCGGCAGTGGTGGTCCTGAACAAGA
TTGACCTCTTGCCGGACGAGGTGGCGGCACAGGTGTCTATTTTACTACTC
TCTGCTCAAAGTCTTGGAGTTGTGCGTTGACCGAATTATTGTCCGATAGC
GTGGACACCAATGTCGTGGTATGTGTTTGTGTCGTTCGTTACACCGCGCG
TGAGCTGTGTGAGTAGTTTCGCATCAAGTGCGCGAAGAAATAGCGAGGAA
ATGGCGATGCTGTCCTGAATTTTCCGCAAGTGCAACAGTCGTAGCAGCGT
AAGTTTGAGCCTAAGCAGAAGAGTATATTATATTTACTTCGTCTGGGGTT
TTAAGACCGACACAATAGCAAAGTGCTACAGGGGGCTGTTCAGCTGTTTT
GACCATTTCTCCTTCAATTCGAATCGCGCATCATTTAAACTCGTCGTGCT
CGATCTGCCATTAGTTAGCGCATCCATGCGCCATACGCAAGTCAAAGCTC
GGTTAGAACAATTCGGGGGTGGTTCAACTGTGCTACCATCTCTCCCTAGA
ATCGTCATTATTTTGCTCTGTGTACCGCTTCAGGTGCATTCTCTTCAAAA
AAGCCCCCATGCGCCGTCATAGCGATAGGGAGGCGTGCTGAACACGCGCC
ACCATCTACTCCTATGCCCCCGCACTGGCACTCCATCGATGAAACGGCAC
AACGTGCCGACACCTTTCGCTGCGTTGCTGTGCCGGCCCTCAGAGAGTGA
AGGAACTATCGGCAGAAGTGAGAGAGTTCGTAGCCATCCAAGACGCCAAG
GTCCTCCCGCTCTCCGCGCACACAGGCTTCGGCCTGGACAACCTCCGAAC
TAGCCTGGCGGATGCTCTAAGCCAAACCTTCCTCCCTAAGGAACGCGTCC
ACCCAACGATGGCAGATCCGGAGAATTTCGGGCTACAACCCAGCCACAGC
GAAACCTCTCCCGATTTGGGGATTCCTAGGGTTGATCCCGATCCTGCACC
ACCTGTAGGGCAGGCTGGATCCGAGGTTGCTGTTGCGGCGGGTGTTCACA
GTGCCGAAGGAGGCTCGGCAGGGGGAGTCGAAGTCGTCATGGCTGAAGCC
CCGGAGGGCGCAGCTACCGGAACTGTGCTTGACTACACTAGTAGCGCCAA
GACGGGCAAGGTGTTGGTGAGTAGGATTTTCGTTGTTCGTGTCTTGTTGT
TTTGGTTGATGGATGCCTGTTCGAAGCGTATTGATCGACCAACAATGCCC
CTCATTTCCTTCCTTTTTTCGTTCTCCTTTGGTTTTTTTGGTTCTACACT
TCGGTGTTGCCAGCTGGTACTGGTGGATAGAGGAGTTCTTCAGCCTGGTG
ATCCATTCGTCTCGGGGATGTTGTGGGGCTTTGTACGCTCAATCTACGAC
GAGGAGGGCGACGAGCTGCTCGAAAATGCAGGTAGGTGGAAGAGCACCGC
TTTGAACGCCCATTTGTACCCCCATCCCCTGGTCAAGCGCGTTTCGAAGT
CTGCAACCCTCGAGCTCGTTGTGTGGGTGTTTCAGTCCCCCTGGTGCTCC
AATTGCACCTCGTTCTGTTGTTCATTTTTGTTTGCCTTCGCATTCTCACC
GCGCAGGCTCACATCATGTTCGCATGGGCAGTTTGTAGCTCGTGCTTTCC
TTCCATGTTTCCTTCCATCGGAGAATTTGTTGTGCCGGACGTGGCCTCCA
TGGCCAGCGGCGGCCCGGTGAAATCGTCGGCCCCTGACTGACTGCTGTAC
TAAACCGGGCGTGGACCTCGGCTGGAAACGTTCTCTGTTCAGGTTCTGGG
GTGGCAGCGAAAGTGGTAATCGTACCTCGAACTCGTGTGTCCAATGCTCC
TTTGGGGGAACCGTTTCGGGTCTTGACAAAGGAGGCTGCCGAGAAGGTGC
GGTTGTGTATCCTGTCCCAATTGTTTTGCTGTCGTCTTCGGTATTTCTGC
TTCGTGACCTGGTCCCCTTTGACCAAACGCCGCAAATGATCGAATATACT
CATAACCAGTCGCCCGGGAGGTCTAGTGGTAAGCGTGGTAAACCTGCTAG
CAGGTGTGGGTTCGATTGTCTCCGAAGGCGAACTGCCACCTGCCATCCCG
GGCTGACTTGGGATTCATTTTCACCGTTGATTTCGTCCGTAGCCCTTGAT
CCGCGAGTTGAAGAGCTGAAAGATCGGCCATTGTCACAAAACGGAGGGGC
CTGAGCGGGGTGCCACCGGAAACCAAGTCCAGACACAAGACGGTGAAGCT
GAGGAACCGAGTTGTGTGTTGTGTGCCGTCGCGTAAGCCGCGACGGATGT
CACATGGTTGATTTTCCCGATCAACGCGCGGCTTCGGGGTCCATTCCTTA
GCCGTGCCCCCGGCATGCGGTCTTGTGCAGTTTTTCCTCCTGCCCCACAA
ACATTCTAATTGATGGAAGTGCATTGCGTTTGTTCACGGCGTGTCAGGTC
GTCTCTGGTGCTCCTTTCCTGCTTGCTTTGATTCTCCCAACTTGGCGCCT
CTTTATTTCGCAGGTCGCGATCATTGGTCAAGGGGAGTGCGAAATGTAGT
CCCCGTAGGTTTCAAGTTGTTCCTTGGGCTAGAGACGCCTATTTGCCAAA
AAAACAATTGCCCATCGAAGAGGGGTCTGCTGGATATGAGCATGCCGTGA
GTATGACTCGGCAGAGTGCTTCTCCACGTGGAGCCTCCTTACCGAGTTGC
GTCGGTACTGTGCTAGGCTGCAATGCCGCTCGTCGCTCCCATCACGACCT
GAGAACGACTGTCGTCACTGTCCCTCTCTTCGCCTTGTTTCTAAGTTTGA
AAGACACTGCGTGTGCCGAGTGGATCCCCGTTCTCTCTCCCCGTAAACTG
TCCGTCTTGCAGGTAGCCCACGTGCGCCTGCTGGCCCGCACTATGGACAA
CTTCATCGACCATAACAAGCTGGACAGAGAATTCGCACACCTCTTGGGCG
GGGACGAGGATGACAATGATCAATCTTATGGCGGGAGCGACGAGGACGAT
CAACCTGGACGCCCGGCGGAACAGCCTGACGGAACGGGTGATGACGTAGA
TTACTCGGAGACAACACTGAGAAGCACAGCACGGTCGCCCGAACCGTCCA
ATCGGCGGTGGAGCAACCTCGAACAAGAAGAGGAATTAGCTCCGGAGAAC
ATGCCGGTGACCATCGTGGTAAAGGCCGACAACGCCAACACCCTCGCCAG
CGTGCTTGACGCGCTTGGAGACTGGGGAGACGTCGAAAACCCCACGGAAA
ACGTTGGGGAACAACTCGCCGCGGAAGCGTCCGATAGCAATCCTGAAGGA
GTTTTGGAGAGAGTTCGACGAAGGCAGCCGCAGGAGTGGGGGGAAGGTGA
CCTGCAGCACAAGCAGCGCCGGAGGTTGCTTGTCTCCGTAGCTCACTCGG
GTGTCGGGGCCGTGACGTCGTCTGACGTACGTCTCGCAAGAGACTGCGAA
TGTCCGGTGTTTGCTCACAACGTCAGGACCGACACCTCCGCCACGAGGGA
GCTGAAACGAGTTGGCGGGGGTGTAGTGCCGGCCTTGCCAGAGGGGGGGG
CGGTGGCGGTTGGTGAGGAGGTGAGCGTAGGCATTGGAGGGCAGGAAGGG
TTTATCGGGAGGGCGGGGGAGGGGAGAGAGTGCGTCGTGGTGTCGGAAAC
GGTAGGGGAGCTACTCGGCGAGATCGAACGGTTTGTGTTGCGCGTCAGAT
AGTACCGGTACAACAGCGGAGAGGGGCGGTTCACAGTTTGTGTGTCTAAC
CCCGCGATTAGGTCTCTGCTCAGTAAGTTTTGGTGCCTTCTCACGTCCGC
GCCGGTCTAGATTCATTCACGGAGTATGCTAGGCGTATCCGCCAAGATAA
CGCAGCTGGCGCTGTGGGCCGATGTGCCAAACGTATGCAGCTCTCGTCGG
TATCGGGGCCGCAGATAACGCGGGTGTGCGGGAAATTCGTGCACTGCCCA
TGAAGTTCATACACAGATTTTGTTTTGTGTCTCTCTCATCTTGTTCTTTT
GTCGAAAATATCTCCCCAGTTGTATGGGAAGAGGCACGCGGGGGGGGGGG
CACGCG
back to top

Coding sequence (CDS) from alignment at chr_28:144764..156669-

>Ec-28_000120.1 ID=Ec-28_000120.1|Name=Ec-28_000120.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=2565bp|location=Sequence derived from alignment at chr_28:144764..156669- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGTTGTTGGCTAGGCGGAGGCTCCTTCCGAGTGGTCGTGGAAGATTGGC
GGCCCCATGTTGCAAGCTGTGGCTGCCGGAACGCCGTGATGCCGAAGCGT
CTCATGTGGCCCAAGCGTCACGCGAGATTCGTGCTGCCAGGCACTTGCCG
AGGAGGCGCAGCTGCTGCATATTTACTGGCACTGCTGGTGCGTTATCTCA
CCGGCAGTTAGAATGCGGGTGCGCGTTCTTGAGCAAGGCAAGTGGTGGGG
GTTTAAGGTTGTTGCATGGTACCAGCAGAGCTGCCGCGAAGGCGAAGCTA
GGGCACGGAGTGAGGACGGAGACACCCGCTATCCCTTCGTTCATCGAGAT
AAGGGAGTTGGCGAGCCTCCTGCGGGTCAAACCAAGGGCGCTTTTCAAGT
CAATGGGCGGCTATCAGGAGAAGAAAAAGCACAGGATCGCCCTCAGCGGG
GTGCCCTACGCGTTTCCAAACCTTGGGAACGTGGTCGTTCCGTTTCAGGA
CGCGCAAGCAGTGGCGAAGGTCTTAGGCAAAGAAATACGGTTCCTCGACA
TCGAAAAAAAGCCGCAGCGTGCCGCTATCCTAGCTCGATCCGACGACTCC
CGGGCACCTTTGTGGGAAAAAGGGCAACCCGCTGGTCAGGGGCGCAGACC
TGTCGTCGTGCTCTTGGGGCACTTCAACCACGGGAAGACGACAATCCTCG
ACGCGCTTCGAGGGCCCAGCAGTGGCATCGCTGATCGAGAACCTGGAGGC
ATCACCCAGGAGATACGAGCGCGCACTGTTTCCCTGGAACCAACGTCGGG
GGAGACGGCTCAGGATACGAACGATGACGACGCTGCCGCATCTCCCCGTT
CGAGGTCGGCCAAGGTGGCGACGGTTCTTGACACCCCTGGCCAGGAAATA
TTTTACCGGATGAGAACGAACGGGGCAAGAGTTGCGGACGCAGTGGTTCT
GGTTGTTTCAGCGGTGGACGGCGTTTGCCTCCAGACGTCGGAGAGCATCG
GCTGTGCGGAGGAGCTAGGACTGCCGGCAGTGGTGGTCCTGAACAAGATT
GACCTCTTGCCGGACGAGGTGGCGGCACAGAGAGTGAAGGAACTATCGGC
AGAAGTGAGAGAGTTCGTAGCCATCCAAGACGCCAAGGTCCTCCCGCTCT
CCGCGCACACAGGCTTCGGCCTGGACAACCTCCGAACTAGCCTGGCGGAT
GCTCTAAGCCAAACCTTCCTCCCTAAGGAACGCGTCCACCCAACGATGGC
AGATCCGGAGAATTTCGGGCTACAACCCAGCCACAGCGAAACCTCTCCCG
ATTTGGGGATTCCTAGGGTTGATCCCGATCCTGCACCACCTGTAGGGCAG
GCTGGATCCGAGGTTGCTGTTGCGGCGGGTGTTCACAGTGCCGAAGGAGG
CTCGGCAGGGGGAGTCGAAGTCGTCATGGCTGAAGCCCCGGAGGGCGCAG
CTACCGGAACTGTGCTTGACTACACTAGTAGCGCCAAGACGGGCAAGGTG
TTGCTGGTACTGGTGGATAGAGGAGTTCTTCAGCCTGGTGATCCATTCGT
CTCGGGGATGTTGTGGGGCTTTGTACGCTCAATCTACGACGAGGAGGGCG
ACGAGCTGCTCGAAAATGCAGGTTCTGGGGTGGCAGCGAAAGTGGTAATC
GTACCTCGAACTCGTGTGTCCAATGCTCCTTTGGGGGAACCGTTTCGGGT
CTTGACAAAGGAGGCTGCCGAGAAGGTAGCCCACGTGCGCCTGCTGGCCC
GCACTATGGACAACTTCATCGACCATAACAAGCTGGACAGAGAATTCGCA
CACCTCTTGGGCGGGGACGAGGATGACAATGATCAATCTTATGGCGGGAG
CGACGAGGACGATCAACCTGGACGCCCGGCGGAACAGCCTGACGGAACGG
GTGATGACGTAGATTACTCGGAGACAACACTGAGAAGCACAGCACGGTCG
CCCGAACCGTCCAATCGGCGGTGGAGCAACCTCGAACAAGAAGAGGAATT
AGCTCCGGAGAACATGCCGGTGACCATCGTGGTAAAGGCCGACAACGCCA
ACACCCTCGCCAGCGTGCTTGACGCGCTTGGAGACTGGGGAGACGTCGAA
AACCCCACGGAAAACGTTGGGGAACAACTCGCCGCGGAAGCGTCCGATAG
CAATCCTGAAGGAGTTTTGGAGAGAGTTCGACGAAGGCAGCCGCAGGAGT
GGGGGGAAGGTGACCTGCAGCACAAGCAGCGCCGGAGGTTGCTTGTCTCC
GTAGCTCACTCGGGTGTCGGGGCCGTGACGTCGTCTGACGTACGTCTCGC
AAGAGACTGCGAATGTCCGGTGTTTGCTCACAACGTCAGGACCGACACCT
CCGCCACGAGGGAGCTGAAACGAGTTGGCGGGGGTGTAGTGCCGGCCTTG
CCAGAGGGGGGGGCGGTGGCGGTTGGTGAGGAGGTGAGCGTAGGCATTGG
AGGGCAGGAAGGGTTTATCGGGAGGGCGGGGGAGGGGAGAGAGTGCGTCG
TGGTGTCGGAAACGGTAGGGGAGCTACTCGGCGAGATCGAACGGTTTGTG
TTGCGCGTCAGATAG
back to top
Synonyms
The feature 'Ec-28_000120.1' has the following synonyms
Synonym
Esi0120_0022
Esi_0120_0022
MTIF2L