Ec-28_000090.2 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Ec-28_000090.2
Unique Name	Ec-28_000090.2
Type	mRNA
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	1002

Homology

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BLAST of Ec-28_000090.2 vs. uniprot
Match: D7FIF6_ECTSI (Cellulose synthase (UDP-forming), family GT2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIF6_ECTSI)

HSP 1 Score: 725 bits (1871), Expect = 2.010e-232
Identity = 579/672 (86.16%), Postives = 581/672 (86.46%), Query Frame = 2

Query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
            MELEKQGVALKAASAMLKGGKTADKSLFRRGSKRLSNEGVDGALNAKHLDEIKKAEHLKKKLKAHHDEARAVLAKKLQVENARTGRVIKTNLGKYANPKLAQGAKAAVLASVVEYLNGEEFVRIVAAPLNYQSPDFVRAMEAESGVMEISFSPTNARQRSMASLPVGAPDYDSKMALLQEQKAIEQQQXXXXXXXXXXXXXXXXXKAAMEQDAADALAMANAANQRRLEEMQRQQDEEXXXXXXXXXXXXXXXXXEAELARMRHKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ARHAEXVARHKA                        +  H +EA             XXXXXXXXXXX                           XXXXXXXXXXXXXXXXXXXXX A X                XXXX     AQIEKELEERVARDIQIERDRVAAESAALQAKMKEFEEEREKAALRAAAEVEAQKAAEAALVARERAAAESLALGRALSAKADLDATTASKEGLSSDRRDPSGREAGTAPVPIGYLVGDNVQALCTPVGGATGSKEYISGEVAHVNPDGSLDVILADGRMRQEVPIAEIKFVSRSEPPSPAGSSAGEQSFWDGNEQGSESSAGQNSVR
Sbjct:    1 MELEKQGVALKAASAMLKGGKTADKSLFRRGSKRLSNEGVDGALNAKHLDEIKKAEHLKKKLKAHHDEARAVLAKKLQVENARTGRVIKTNLGKYANPKLAQGAKAAVLASVVEYLNGEEFVRIVAAPLNYQSPDFVRAMEAESGVMEISFSPTNARQRSMASLPVGAPDYDSKMALLQEQKAIEQQQXXXXXXXXXXXXXXXXXKAAMEQDAADALAMANAANQRRLEEMQRQQDEEXXXXXXXXXXXXXXXXXEAELARMRHKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLARHAEXVARHKAXXXXXNEGVGLENGVLTSQSDSPGVVHHQQEARLEKEALEEMRRRXXXXXXXXXXXLQEAVAKHQEETRLEAERVKAELEALKXXXXXXXXXXXXXXXXXXXXXRARXAEAAAEALRIEQENDRXXXXEVAMRAQIEKELEERVARDIQIERDRVAAESAALQAKMKEFEEEREKAALRAAAEVEAQKAAEAALVARERAAAESLALGRALSAKADLDATTASKEGLSSDRRDPSGREAGTAPVPIGYLVGDNVQALCTPVGGATGSKEYISGEVAHVNPDGSLDVILADGRMRQEVPIAEIKFVSRSEPPSPAGSSAGEQSFWDGNEQGSESSAGQNSVR 672

[Close]

BLAST of Ec-28_000090.2 vs. uniprot
Match: A0A6H5KTF3_9PHAE (GT2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTF3_9PHAE)

HSP 1 Score: 429 bits (1102), Expect = 8.560e-128
Identity = 259/340 (76.18%), Postives = 273/340 (80.29%), Query Frame = 2

Query: 2111 AQIEKELEERVARDIQIERDRVAAESAALQAKMKEFEEEREKAALRAAAEVEAQKAAEAALVARERAAAESLALGRALSAKADLDATTASKEGLSSDRRD-PSGREAGTAPVPIGYLVGDNVQALCTPVGGATGSKEYISGEVAHVNPDGSLDVILADGRMRQEVPIAEIKFVSRSEPPSPAGSSAGEQSFWDGNEQGSESSAGQNSVRSSPSSPKHLLEQTQSFGHEISETKAPHSPADGEGLRDGGKPGWQTATNGSLDDILGTKLRTAEKEAAPATRYTRGKGGDDAPAAVAAVAGSRETPKKRGSLXXXLGIKVNRPDRRSMRNILEEGDSVEVLV 3127
            AQIEKELEERVARDIQIERDRVAAESAALQAKMKEFEEEREKAALR AAEV+AQKAAEAALVARERAAAES+ALGRALSAKADLDATTASK+ +S DRRD PS   AGTAPVP GY+VGDNVQALCTPVGGATGSKEYISGEVAHVNP GSLDVILADGRMRQEVP+AEIKFVSRS                                  SPSS KHLLEQTQSFG + SETKAPHSPADGEGL+DGGKP WQT+TNG LDD+LGT+LRTAEKEAAPATR T             A AGSRETPKKRGSL   LGIKVNRPDRRS+RNILEEGDSVE ++
Sbjct:    3 AQIEKELEERVARDIQIERDRVAAESAALQAKMKEFEEEREKAALRVAAEVKAQKAAEAALVARERAAAESMALGRALSAKADLDATTASKKMVSLDRRDHPS---AGTAPVPGGYIVGDNVQALCTPVGGATGSKEYISGEVAHVNPGGSLDVILADGRMRQEVPVAEIKFVSRS----------------------------------SPSSLKHLLEQTQSFGQKTSETKAPHSPADGEGLQDGGKPRWQTSTNGILDDVLGTQLRTAEKEAAPATRGTXXXXXXXXXXXXXAAAGSRETPKKRGSLDDILGIKVNRPDRRSIRNILEEGDSVEXVL 305

[Close]

BLAST of Ec-28_000090.2 vs. uniprot
Match: A0A6H5KRP7_9PHAE (GT2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRP7_9PHAE)

HSP 1 Score: 211 bits (536), Expect = 1.040e-59
Identity = 117/144 (81.25%), Postives = 120/144 (83.33%), Query Frame = 2

Query:  833 MLKGGKTADKSLFRRGSKRLSNEGVDGALNAKHLDEIKKAEHLKKKLKAHHDEARAVLAKKLQVENARTGRVIKTNLGKYANPKLAQGAKAAVLASVVEYLNGEEFVRIVAAPLNYQSPDFVRAMEAESGVMEISFSPTNARQR 1264
            MLKGGKTAD SLFRRGSKRLS+EGVD ALNAKHL               HHDEARA+LAKKLQVENARTGRVIKTNLGKYANPKLAQGAKAAVLASVVEYLNGEEFVRIV APLNYQSPDFVRA EAE G + IS S TNARQR
Sbjct:    1 MLKGGKTADNSLFRRGSKRLSSEGVDDALNAKHLXXXXXXXXXXXXXXXHHDEARAILAKKLQVENARTGRVIKTNLGKYANPKLAQGAKAAVLASVVEYLNGEEFVRIVTAPLNYQSPDFVRATEAELGAIGISLSLTNARQR 144

The following BLAST results are available for this feature:

BLAST of Ec-28_000090.2 vs. uniprot

BLAST of Ec-28_000090.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
D7FIF6_ECTSI	2.010e-232	86.16	Cellulose synthase (UDP-forming), family GT2 n=1 T...	[more]
A0A6H5KTF3_9PHAE	8.560e-128	76.18	GT2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta...	[more]
A0A6H5KRP7_9PHAE	1.040e-59	81.25	GT2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_28	contig	chr_28:65467..76226 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Properties


Property Name	Value
Length	3159
Hectar predicted targeting category	other localisation
Gene id	Ec-28_000090.2

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-28_000090	Ec-28_000090	Ectocarpus species7 Ec32 male_plus_femaleSDR	gene	chr_28 65467..90784 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-28_000090.2	Ec-28_000090.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	polypeptide	chr_28 65619..76225 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-28_000090.2.1	Ec-28_000090.2.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 65467..66052 +
Ec-28_000090.2.2	Ec-28_000090.2.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 66349..66549 +
Ec-28_000090.2.3	Ec-28_000090.2.3	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 66931..67179 +
Ec-28_000090.2.4	Ec-28_000090.2.4	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 67397..67624 +
Ec-28_000090.2.5	Ec-28_000090.2.5	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 68037..68157 +
Ec-28_000090.2.6	Ec-28_000090.2.6	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 68578..68762 +
Ec-28_000090.2.7	Ec-28_000090.2.7	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 69147..69243 +
Ec-28_000090.2.8	Ec-28_000090.2.8	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 70307..70441 +
Ec-28_000090.2.9	Ec-28_000090.2.9	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 71968..72072 +
Ec-28_000090.2.10	Ec-28_000090.2.10	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 72470..72624 +
Ec-28_000090.2.11	Ec-28_000090.2.11	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 73314..73605 +
Ec-28_000090.2.12	Ec-28_000090.2.12	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 74074..74351 +
Ec-28_000090.2.13	Ec-28_000090.2.13	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 75197..75298 +
Ec-28_000090.2.14	Ec-28_000090.2.14	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 75802..76226 +

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-28_000090	5UTR:Ec-28_000090.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	five_prime_UTR	chr_28 65467..65618 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-28_000090.2	CDS:Ec-28_000090.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	CDS	chr_28 65619..66052 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-28_000090	3UTR:Ec-28_000090.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	three_prime_UTR	chr_28 76226..76226 +

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at chr_28:65467..76226+
coding sequence from alignment at chr_28:65467..76226+

mRNA sequence

>Ec-28_000090.2 ID=Ec-28_000090.2|Name=Ec-28_000090.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1002bp
MDRSPSRLRSAGGSVASGASIPTSPESQYDGRGSLVGRSTRAADHARDQV
QSALDGLLSDDDPSNPRSPPGRYAPSMDGTRSPGQPEAQGRRSLVPPDPI
IPIEASYPRSGRSSTDLLSPARKASSVRAAAGGGGYTPTGAGGRRKRSSV
RSPKGYNMGTSQRQAVNISTLEGLQVFLDEKQKEVVKAHARRTNELEAML
AKEESYFGTLLDMELEKQGVALKAASAMLKGGKTADKSLFRRGSKRLSNE
GVDGALNAKHLDEIKKAEHLKKKLKAHHDEARAVLAKKLQVENARTGRVI
KTNLGKYANPKLAQGAKAAVLASVVEYLNGEEFVRIVAAPLNYQSPDFVR
AMEAESGVMEISFSPTNARQRSMASLPVGAPDYDSKMALLQEQKAIEQQQ
RMEEEALRRQEMLERENKAAMEQDAADALAMANAANQRRLEEMQRQQDEE
LEEQRRQLDEHQEHLRREAELARMRHKEELDLHRAEMEREREAVEARQAE
AKRLQEEELEKQRQEMRRKHEEDMELQRQELARHAEEVARHKAELAKHNE
EARLEKEALEEMRRRENEAEEDERRRLQEAVAKHQEETRLEAERVKAELE
ALKLEREAVAQAEKAEREAEEEARRAREAEAAAEALRIEQENDRRKASEV
AMRAQIEKELEERVARDIQIERDRVAAESAALQAKMKEFEEEREKAALRA
AAEVEAQKAAEAALVARERAAAESLALGRALSAKADLDATTASKEGLSSD
RRDPSGREAGTAPVPIGYLVGDNVQALCTPVGGATGSKEYISGEVAHVNP
DGSLDVILADGRMRQEVPIAEIKFVSRSEPPSPAGSSAGEQSFWDGNEQG
SESSAGQNSVRSSPSSPKHLLEQTQSFGHEISETKAPHSPADGEGLRDGG
KPGWQTATNGSLDDILGTKLRTAEKEAAPATRYTRGKGGDDAPAAVAAVA
GSRETPKKRGSLDDILGIKVNRPDRRSMRNILEEGDSVEVLVPPADGNGD
GG

spliced messenger RNA

>Ec-28_000090.2 ID=Ec-28_000090.2|Name=Ec-28_000090.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=3159bp|location=Sequence derived from alignment at chr_28:65467..76226+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
TACTGCCGTGCGCGTTCGTGACGATATATCAGGTGCAGATTGCCCCTGCG
TTCACATGAAGGCCGTAACTCTTTAACTGCCTCGTACAGGCAAGTGCCCC
CATCTGCAATTATTATTAGTTGCCTTACGGCGACGGCGGCCACGTCGCCG
AGATGGATAGGTCTCCTTCTCGGTTGCGAAGTGCAGGGGGGAGCGTTGCA
TCTGGCGCCTCCATTCCTACGTCGCCAGAGAGTCAGTACGATGGCCGTGG
TTCCTTGGTGGGCCGTAGCACTCGAGCTGCTGACCATGCCCGAGACCAAG
TGCAGTCGGCTCTTGACGGTCTTCTCAGCGACGACGACCCGTCAAACCCT
CGATCGCCACCTGGAAGGTATGCGCCATCCATGGACGGCACTCGATCGCC
AGGACAACCGGAAGCACAAGGACGGCGATCACTTGTCCCACCAGACCCTA
TTATTCCTATCGAAGCAAGCTATCCCCGCAGTGGTCGATCGTCGACTGAC
CTGCTCTCTCCTGCTCGTAAAGCCTCATCAGTCAGGGCGGCCGCGGGCGG
CGGCGGGTACACACCTACTGGTGCGGGAGGCAGGAGAAAACGAAGCAGCG
TACGGTCACCGAAAGGCTACAACATGGGGACGTCCCAAAGACAAGCCGTG
AATATCTCCACGTTAGAAGGGCTACAAGTGTTCCTGGACGAAAAACAGAA
GGAGGTGGTCAAGGCACACGCTCGCCGAACGAACGAGCTCGAAGCGATGC
TAGCCAAGGAAGAGAGCTATTTTGGCACCTTGCTAGACATGGAGTTGGAG
AAGCAAGGAGTAGCGCTCAAGGCCGCGTCCGCAATGCTGAAGGGGGGCAA
AACAGCTGACAAGAGTCTATTTCGGCGCGGTAGTAAGCGACTGTCCAACG
AGGGGGTGGATGGCGCGCTGAACGCCAAACACCTTGACGAGATAAAAAAA
GCCGAGCACCTCAAGAAAAAGCTCAAGGCGCATCATGACGAAGCGCGCGC
CGTTCTGGCCAAGAAGCTTCAAGTGGAGAATGCCAGGACGGGACGCGTGA
TAAAGACAAACCTAGGCAAGTACGCGAACCCCAAGCTAGCCCAGGGTGCG
AAGGCTGCGGTCCTTGCGAGCGTGGTCGAATATCTCAACGGAGAAGAGTT
CGTCCGGATAGTGGCGGCGCCTCTGAACTACCAAAGCCCCGACTTTGTTC
GCGCGATGGAAGCCGAGTCAGGAGTGATGGAGATCAGCTTCAGCCCCACA
AATGCGCGGCAGAGAAGTATGGCTTCTTTGCCGGTGGGCGCGCCTGACTA
CGACAGCAAGATGGCGCTGCTGCAAGAGCAGAAGGCAATAGAGCAACAAC
AGAGGATGGAGGAAGAAGCCCTCCGGCGACAAGAGATGCTGGAGCGCGAG
AATAAAGCAGCCATGGAGCAGGATGCCGCCGACGCTCTTGCAATGGCCAA
CGCGGCGAATCAGAGGCGCTTGGAAGAGATGCAGAGGCAACAGGACGAAG
AGCTCGAGGAGCAGAGGCGCCAGCTGGATGAGCACCAGGAACACCTGCGT
AGAGAGGCAGAACTCGCAAGGATGCGGCACAAGGAAGAGCTCGACCTTCA
TCGCGCTGAGATGGAGAGAGAGAGGGAAGCCGTCGAGGCCCGCCAGGCCG
AGGCAAAGCGCCTGCAGGAGGAGGAGCTAGAAAAGCAGCGGCAGGAGATG
CGACGCAAGCACGAGGAGGACATGGAGCTACAGCGGCAGGAGCTTGCGAG
GCACGCAGAGGAGGTGGCCAGGCACAAGGCCGAGCTTGCGAAACACAACG
AGGAGGCCAGGTTGGAGAAAGAAGCCTTGGAGGAGATGAGGCGACGCGAG
AACGAAGCGGAGGAGGATGAGAGGCGGCGCCTGCAAGAAGCAGTTGCCAA
ACACCAGGAGGAGACGAGGCTGGAGGCAGAGCGCGTCAAGGCGGAGCTGG
AGGCCCTCAAGCTGGAGCGAGAGGCCGTCGCGCAAGCGGAGAAGGCCGAG
CGCGAGGCAGAGGAGGAGGCTCGTCGAGCTAGAGAGGCTGAAGCTGCTGC
AGAGGCTCTGAGGATCGAACAGGAAAATGATCGGAGGAAAGCGTCCGAGG
TGGCCATGAGGGCTCAGATAGAGAAAGAGCTCGAAGAGCGCGTGGCCCGC
GACATCCAGATCGAGAGGGACCGGGTGGCCGCGGAGAGCGCGGCTCTCCA
GGCCAAGATGAAAGAGTTCGAGGAGGAGCGGGAGAAAGCTGCGCTGCGAG
CGGCCGCGGAAGTCGAGGCGCAGAAGGCGGCGGAAGCCGCGCTCGTCGCC
AGGGAGCGCGCCGCCGCGGAGTCGCTGGCCCTTGGGAGAGCCTTGTCGGC
GAAGGCGGACCTGGACGCAACAACCGCATCGAAGGAAGGACTCTCTTCTG
ATCGCCGAGACCCCAGCGGACGGGAGGCCGGGACCGCCCCGGTGCCGATA
GGGTATCTGGTCGGGGACAACGTGCAAGCTCTGTGCACCCCGGTGGGCGG
AGCGACCGGCTCCAAGGAGTACATCTCCGGGGAGGTGGCGCACGTCAACC
CCGACGGATCCTTGGACGTTATCCTGGCGGACGGGAGAATGAGGCAGGAG
GTGCCAATTGCGGAGATCAAGTTCGTCAGTAGGTCCGAGCCGCCGTCACC
AGCGGGGTCGTCGGCCGGGGAGCAGTCTTTTTGGGATGGCAACGAGCAGG
GAAGCGAATCGTCTGCAGGACAGAACAGCGTAAGGTCCTCTCCGTCTTCT
CCGAAGCACCTCCTCGAACAAACCCAATCGTTTGGTCATGAGATAAGCGA
GACAAAGGCACCGCATTCCCCGGCTGATGGTGAAGGCCTTCGGGATGGTG
GGAAACCCGGATGGCAGACCGCAACCAACGGCAGTCTCGACGACATTCTG
GGAACCAAGTTGCGAACCGCAGAGAAGGAAGCCGCACCCGCCACGCGGTA
CACGAGAGGAAAGGGCGGAGACGACGCGCCAGCGGCAGTGGCGGCGGTGG
CAGGGAGCAGAGAGACGCCGAAGAAACGGGGAAGCCTGGACGACATTCTC
GGAATAAAGGTTAACAGGCCGGACAGGAGGAGCATGCGAAACATCTTGGA
GGAAGGCGACAGCGTCGAGGTTTTAGTCCCGCCAGCGGATGGAAATGGTG
ATGGAGGAG

protein sequence of Ec-28_000090.2

>Ec-28_000090.2 ID=Ec-28_000090.2|Name=Ec-28_000090.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=1002bp
MDRSPSRLRSAGGSVASGASIPTSPESQYDGRGSLVGRSTRAADHARDQV
QSALDGLLSDDDPSNPRSPPGRYAPSMDGTRSPGQPEAQGRRSLVPPDPI
IPIEASYPRSGRSSTDLLSPARKASSVRAAAGGGGYTPTGAGGRRKRSSV
RSPKGYNMGTSQRQAVNISTLEGLQVFLDEKQKEVVKAHARRTNELEAML
AKEESYFGTLLDMELEKQGVALKAASAMLKGGKTADKSLFRRGSKRLSNE
GVDGALNAKHLDEIKKAEHLKKKLKAHHDEARAVLAKKLQVENARTGRVI
KTNLGKYANPKLAQGAKAAVLASVVEYLNGEEFVRIVAAPLNYQSPDFVR
AMEAESGVMEISFSPTNARQRSMASLPVGAPDYDSKMALLQEQKAIEQQQ
RMEEEALRRQEMLERENKAAMEQDAADALAMANAANQRRLEEMQRQQDEE
LEEQRRQLDEHQEHLRREAELARMRHKEELDLHRAEMEREREAVEARQAE
AKRLQEEELEKQRQEMRRKHEEDMELQRQELARHAEEVARHKAELAKHNE
EARLEKEALEEMRRRENEAEEDERRRLQEAVAKHQEETRLEAERVKAELE
ALKLEREAVAQAEKAEREAEEEARRAREAEAAAEALRIEQENDRRKASEV
AMRAQIEKELEERVARDIQIERDRVAAESAALQAKMKEFEEEREKAALRA
AAEVEAQKAAEAALVARERAAAESLALGRALSAKADLDATTASKEGLSSD
RRDPSGREAGTAPVPIGYLVGDNVQALCTPVGGATGSKEYISGEVAHVNP
DGSLDVILADGRMRQEVPIAEIKFVSRSEPPSPAGSSAGEQSFWDGNEQG
SESSAGQNSVRSSPSSPKHLLEQTQSFGHEISETKAPHSPADGEGLRDGG
KPGWQTATNGSLDDILGTKLRTAEKEAAPATRYTRGKGGDDAPAAVAAVA
GSRETPKKRGSLDDILGIKVNRPDRRSMRNILEEGDSVEVLVPPADGNGD
GG

mRNA from alignment at chr_28:65467..76226+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>Ec-28_000090.2 ID=Ec-28_000090.2|Name=Ec-28_000090.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=10760bp|location=Sequence derived from alignment at chr_28:65467..76226+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
TACTGCCGTGCGCGTTCGTGACGATATATCAGGTGCAGATTGCCCCTGCG
TTCACATGAAGGCCGTAACTCTTTAACTGCCTCGTACAGGCAAGTGCCCC
CATCTGCAATTATTATTAGTTGCCTTACGGCGACGGCGGCCACGTCGCCG
AGATGGATAGGTCTCCTTCTCGGTTGCGAAGTGCAGGGGGGAGCGTTGCA
TCTGGCGCCTCCATTCCTACGTCGCCAGAGAGTCAGTACGATGGCCGTGG
TTCCTTGGTGGGCCGTAGCACTCGAGCTGCTGACCATGCCCGAGACCAAG
TGCAGTCGGCTCTTGACGGTCTTCTCAGCGACGACGACCCGTCAAACCCT
CGATCGCCACCTGGAAGGTATGCGCCATCCATGGACGGCACTCGATCGCC
AGGACAACCGGAAGCACAAGGACGGCGATCACTTGTCCCACCAGACCCTA
TTATTCCTATCGAAGCAAGCTATCCCCGCAGTGGTCGATCGTCGACTGAC
CTGCTCTCTCCTGCTCGTAAAGCCTCATCAGTCAGGGCGGCCGCGGGCGG
CGGCGGGTACACACCTACTGGTGCGGGAGGCAGGAGGTACGCTTGGGCTA
AGAAACTGAAGTTCTGGCTACGCGGGTTGTCGGTGTGTTTTATCGAGGTT
TTGTTGGTCTTTTTCCGCATACCAGCACGTTTTGCCGCGATGTTCGAACT
TCCGTGCACAGCCAGTTGCCAGGATACTGCCTTTACGTGTGCTACCGCTG
CTTGGTCTGGCAGGTGCTGACCAATTCCGGCTCGCATTCAACAGCCGAAA
GCCATACTCTGCCAAAAAGCACTGTTCCTGGACTGCATAACCCAATCTTT
TTTGCCCAAATATGATTCTGCTATGGAACCAGAAAACGAAGCAGCGTACG
GTCACCGAAAGGCTACAACATGGGGACGTCCCAAAGACAAGCCGTGAATA
TCTCCACGTTAGAAGGGCTACAAGTGTTCCTGGACGAAAAACAGAAGGAG
GTGGTCAAGGCACACGCTCGCCGAACGAACGAGCTCGAAGCGATGCTAGC
CAAGGAAGAGAGCTATTTTGGCACCTTGCTAGAGTGAGATACGTCATTGC
TGCTATCAGTCTGTGGTAGTGTTGAGCGTCAAGTATTGATTTGCTCATCA
AGCGTACATTCAACTTGCCAGTCTACCCCTACTTTTGCCCTCTCCTATTG
AATCTGAATAGTGGAGAATGTTCGACAAAGAATGGCTTGTGTAACACAGA
AGAGAAACCCTCGTGGAGCACCCTTACCCCCCCTGTAGTCCTTTCGTTGT
ACTTGCTAGACCAAACCGCCGACAGACGGCCATGTACGTTAGTTTAGGAT
GCACGCGCGCCCAACGTTTTCTGTGCCAAGTTTGCACTACACGTTCCACC
AATGATCCACCACCTCTACGGCACGTCATTTTGATCGCACCGAACCAACC
GTTCGCGGGGGCAGCATGGAGTTGGAGAAGCAAGGAGTAGCGCTCAAGGC
CGCGTCCGCAATGCTGAAGGGGGGCAAAACAGCTGACAAGAGTCTATTTC
GGCGCGGTAGTAAGCGACTGTCCAACGAGGGGGTGGATGGCGCGCTGAAC
GCCAAACACCTTGACGAGATAAAAAAAGCCGAGCACCTCAAGAAAAAGCT
CAAGGCGCATCATGACGAAGCGCGCGCCGTTCTGGCCAAGAAGCTTCAAG
TGGAGAATGCCAGGTTAGCTCCGTCGAGGTCACACTCATCTACATTGCGG
TTCTCTCCCACTGGCATGGGAGGCGTGGTTGTATTTCACGTTGGCTTGTT
ATGCTTCCCGGTCAATGATCGTACCACGCATTACCTGACGTGGTGTGTTT
CTGTGAGAAACAACTGACAATCGACAGGTACCTCGTTTTGCTGCATCTTT
CGCCACTGTGCGGCATCGTCAATCGCACAGGACGGGACGCGTGATAAAGA
CAAACCTAGGCAAGTACGCGAACCCCAAGCTAGCCCAGGGTGCGAAGGCT
GCGGTCCTTGCGAGCGTGGTCGAATATCTCAACGGAGAAGAGTTCGTCCG
GATAGTGGCGGCGCCTCTGAACTACCAAAGCCCCGACTTTGTTCGCGCGA
TGGAAGCCGAGTCAGGAGTGATGGAGATCAGCTTCAGCCCCACAAATGCG
CGGCAGAGGTGGGTGATTGCACAAGCTGAGCATTCGAACAACTTGTACTG
TGCCGGATATGATATACACTAGTACGCGCTGAACAACATGTACATTGTAC
GCTACGCGGAAATGAACACCATGTGGTACGTTAGCTTTACGTTAGGTCAC
GCATCGCGGTCATTCTCGGGGATCTCGCATCCCTCCGCATCAGGCGTGAA
TGACGTTCGCGAGTCGATTGCGTCTTTCGACGTTAGCCATCAACGGCACG
TGGAGTACGGACGAGTGTCCTGCTTCGAGCTCGGGCAACGGCACCGCTTA
TATGGCTGTATCCGACCCTTCACACACAGCGGTAGGTGGCACTGATAAAA
GTGGGGCTATTATTGTACATGTTCTTAGCTGGTGCGTTGTCGTTCACCTC
CTTGCTCACATACACTCCAGAAGTATGGCTTCTTTGCCGGTGGGCGCGCC
TGACTACGACAGCAAGATGGCGCTGCTGCAAGAGCAGAAGGCAATAGAGC
AACAACAGAGGATGGAGGAAGAAGCCCTCCGGCGACAAGAGGTAAATATG
CCCAGTGACCCAGCCAGCGTATTCCCCGAACGGCTCTATGAGCAGCAGAC
ACGCCGATGAGGAATCGGACTTCCCTAAACTCTACGGCCGCAGCTGTTAC
TACTGAGGGTTGGGTGCCGCTCCGAACGATCCCCCCAATGCCGAGAGGAT
GGAGCAGGGGCAAGCTTGGGTCGTTGTGCCTCACAGCGATTCACTGTCAA
CAATCGGTTCTGGGGCGGGAAGAACAGTAGTTCACATCAAGAATATGTCT
CGTGCAATTCTAACCGACCTCTTTCGACTACATGCGGCAAGCAGAAAGCT
GGAATGACACCCCCCGATGTTCGTACCTCTAGCTTTTACCTGTTAAGTCT
CCCTCTAGAAGGGTTTCATCCTACAACTTCGTGTTGTGTGGAATACCCGT
TGTTTGCGAAGATGCTGGAGCGCGAGAATAAAGCAGCCATGGAGCAGGAT
GCCGCCGACGCTCTTGCAATGGCCAACGCGGCGAATCAGAGGCGCTTGGA
AGAGATGCAGAGGCAACAGGACGAAGAGCTCGAGGAGCAGAGGCGCCAGC
TGGATGAGCACCAGGAACACCTGCGTAGAGAGGCAGAACTCGCAAGGTGC
AACGATATCTGTGTTCCTGGCCCTGGAAGAAACTCCTCCAGATTCCCAGT
GTCCCAATGCTCAAAGGCCAGATGCGTTTGATCCAAACAGTTCATGTCAT
TGCTTAGGCTTGGCCTTCTGGACGTTTACCTTTTGGTACTTCCGTGGTTG
GTTTCTTGCTTTTCACCAATATTTATCGTGTGTCAACAAGCAATAGCGAG
CTCCGATCAAGAAATGGGCTAAAGCCAACCCGCCTGAGGGGCCTTCACGA
AAACGCCTGCGTACATGTGCCTAGCACCTAACAATTCAACTTTGGTGGCA
CGAGAAGCAGTGACATATTCTGCCACTGTTGTAAGTGTTGAATGCATCGC
TGTTGGTTTTCGCTTTTTGGCGCATGAAAGGATGCGGCACAAGGAAGAGC
TCGACCTTCATCGCGCTGAGATGGAGAGAGAGAGGGAAGCCGTCGAGGCC
CGCCAGGCCGAGGCAAAGCGCCTGCAGGTACAGTGTGTTGCCAAGTTTTC
GGGTGCTGTGTTTCTTCACGTAGGATCGAACGCACTCACCAGCCAGCCGA
TGACAAGCAGTCAACACCAGCGAGTGTGTGTCTTTGGTTGCAATCAATCG
TGTCATCGATCATGCTAATAGAGCCGACCGGGGAATGACGATCGCCAGTC
TCAGGACAAGATGACCGTTCAAACCATGAAGAGGGCTTTAACATTCGTCT
CATAAACATCGACATCGTTGTTCTACTGGCCAACAAAATACGCCAGCCGT
ATCAAGCTAAATGCTCCACAGTTCGAACCGGGTCACGCCTGGAGACAACT
GGGTGGCTTGGAATTCTAAGGGGAATACTAAGAATAAGCTTTGTTGAAAA
ACGATTGGAAATCTATGGTCTTTCTCTTCGCAATGACACCCGTTCTACTT
GTAACCTCTGCCCTGCACCTCCTCCGGCCTGCTCTCCAAAGGCGAAGAAC
GAAAATACGTGGTCATCCTAACCAGGCGTAAGGATCAAGCAAGAAACACA
TCGAAATAATAAGACCGTGAAAATTATGGGAGGGCATGAAATAATGCAAC
TTCAATATCAGTGGCGAAACTGAAAGACGTGTGGATGAAAATCGCCAGGA
AAAACTAAAAAATAGTACCTGAAGCAACTTGAGAGCTTCCGCATGTGTAA
GGAAGGTAAAAAATAAACGAAGTATTTTGGCGCGGAGCCGAGTGTTGGCC
CTTGGCCCATGATTATCGAAAGATTGGCCCCAATAATGGAGGTTAAATTC
GCGTCGAATATGGAGCCCAACGGAGCGACATGGGGGAGAACGTTTTCCTT
CTCGAACCCCAGGACCAAGCGTTGGAACTGATGATGTTTTGGCCCAAATG
TGGAACTCAAGTGGGGAACGCTCCCACGATTCAGGGAGTTCCGAAAGAAC
ACACGTAAAAAATAGACGAACGAATCAGTGAGAGAACGACAGACTCAAAC
ATGGACAAAACACCCGTTGGTAGCCGTCTTCTTTCAGGTTGGTTTTTACT
TGAAAATCGATAGTTTTTGGTTGTCAACCTGCATCGGTAGGAGGAGGAGC
TAGAAAAGCAGCGGCAGGAGATGCGACGCAAGCACGAGGAGGACATGGAG
CTACAGCGGCAGGAGCTTGCGAGGCACGCAGAGGAGGTGGCCAGGCACAA
GGCCGAGCTTGCGAAACACAACGAGGTAAGGGGAGGAAGGTGGCGGGTGT
GCTCGTGAAACGCACGACGTAGTCGGTAAACCATAGACCTCGCATTCCCG
GTGAGGGGCGTTAGCCGAGACTTCTACCGGGAACGATACACGTTGAGGAC
AACCGTACCACCTACGGTGCTTGGTGGATGAGAATATCCTTTGCGTGACA
CTCCTGCCACACATGTAAAAACGTGCGTTGGCACACGACACGATCCGCTA
CCACTTACGTTCTCTAGGGCGTGGGTTTGGAGAATGGCGTTCTTACCAGC
CAGAGTGATTCACCAGGAGTGGTGCACCATCAACAGGTATACGCTGGGCG
TGGTGACTCTGGCCGAGAAGGATCACGGATCCCCCCGTTCATGGTTTTTT
AGGCATCGGACAGTCGTGATACTGCGACGTATGCGTTCACTATGGCTTGA
AACGCGCAACAATGTTCGTCGGCGATGTCGTGTTGTTGTCGCATCGGCGT
CGGGAAATCTCCAAGAGAAAATTGAGGTAAGGATGCCTACATTCATGGTG
GGTACGGCAAAACTCTTTATCAGCAACTGTGAAAAGAGAGAATTGTCCTC
GACAGACGTTGGGGAGATTGTACCTTTATGAAGGTGGTCTCCACATTACA
CCCCCTTTTTCGAGACTTCTTGTTTGCTAGGTAAGAGAAGTCTTCTTGGG
GTAACCGGACCCCGACCGGCTGGCGGCGGGGCGATTCACTTTTCTTCACA
ATCCTCTGTGCGTGATTACACGGGTTCGCTACGTCCGCCACGTCATCAGA
AGTTCCGAGTTCGATAGCCAGTGCGTCCTTCTTTGGCCCACCCACCGTTT
TTCTTTTTCCGTTGCCCGGAAGAAAACTTGGTGCGCAGCGGGGTTTGAAC
CCGTGTCTTTTTGCAACCAAAAGCAGACACTCTGGCATCTCTTCGTCGAC
GCCATTGTGAAAAGCGAGAATCGTCCTCGACAGACGTTGGGGAGAGTGTA
CCTCTATGAAGGTGGTCTCCACACAACAACCTAGAGAAAGACGACGACAA
CATTAAGCTCAACGTACGCTACGCAACAACAACCAGCTGCAGAGTGAATA
TGGGGGATTTGTCCTGTCGTCAACGTGTGTAGCTTTGTGCGCGACATGGG
TTAGCGCCCGGCGGACTTACACAGTACAACGACCAGCGCCGGCCCCAGGG
GATGCGTTGAAGCGCAGCTCTTGGCACCGCCTGGAAAGGCGAAACAACCC
ACTTGATGCGACTCTTCTCTTATATTCTAGTAGGGGACAGGATAAATGCA
GACGAGAAAGCGGATCGCCCTCCCTCATTCCCCCAACTATGTCGGCTCGT
GTCCGTCGTTTCACCTTGCGGTAGAACGTGAAAATGCTTCCGCGAGATAG
AGTAACCTGAGCATATCGCCTCGCCCTGTTATTTACAGTTGGCACTTCCA
GCCCGCCATGTCGAGAGCTGTTTACTACCGTCTTCTTACCCATCCCCCCA
CTTCACCAATCCGGCTGGCCGGGTTCCCACCCGATCCGTTGCTCTCAACA
GGAGGCCAGGTTGGAGAAAGAAGCCTTGGAGGAGATGAGGCGACGCGAGA
ACGAAGCGGAGGAGGATGAGAGGCGGCGCCTGCAAGAAGCAGTTGCCAAA
CACCAGGTGGGTGTGAACACGCGGTGTGTTGGTCCACAGCAGTGCACGTA
ACAGTAGCAGTTTTGTCTTGCGAATAAAAACAGGAGCGGGCGACCCAATC
TTCATCACGATATTGAGCGCGCTTCGGGAGCTTAACTTGGTCGGGGTCGA
AGCCTTGGACGCCCATCCGCACGTACGCCGGGGATCGCACGCCATACAGA
ATCGAGTACAGAAGGGCGCAGAGGTTTTGTTGGGGTGTTGCTGCGTTGTA
CATCGATCCACATAGTACCCTCTAAGCAGCAACGTGGCGTCGCACACACC
CGCCACCCTCGTAGGCGACTCTGACCTATGATTTATATTGTCGCGGTTCT
TGCGGGAACGTTCTTGGGACTTCCAATGCACGCGGTTCGGACGTACGCAC
CAGGAGGAGACGAGGCTGGAGGCAGAGCGCGTCAAGGCGGAGCTGGAGGC
CCTCAAGCTGGAGCGAGAGGCCGTCGCGCAAGCGGAGAAGGCCGAGCGCG
AGGCAGAGGAGGAGGCTCGTCGAGCTAGAGAGGCTGAAGCTGCTGCAGAG
GCTCTGAGGCAAGCGGCATATAATAATTCGCGCGAAACTAGTCTAGTCTG
TACGCAACGTGAGTTACGAATTTTCGAACCCCTGCCTGGATGTACGAAGA
CGCCATCATTTGTCCCTAACTTGTTGCAACATAATAATGGACGATGGTTT
GTTCTGGTGTTTCGTTCAACAGGCAAGGAGAGTGTCGACCACAAACTCGA
AGGGAACATAATCGCATGTTGGAAAACGCTTCAAACTTGTACCTCCACGA
AATTATTTCTGGATGTCGTCGAACGAATTGAACGAAGTACATTCTTTGGG
ATACAATTCCAATGCCATAGGGTTTCAAGACAACACAGAAGTTCCTCCAA
ACATAAACCTAGTGACACGTACGTACGCGAAGCCAACAGTGTGTGCTCCA
GCATATCTGCAAAGTGGGGGGGGTTCAACAAATACTATCTCGATTCGATC
TAAAACGCCTGGGAAAATACGTACAATGTCCTCTGGATCTTCCCCTTTCT
TTAGCTTGTTCGACGATCAGTGACTGGCGCAATTTCAATATCAACCAATG
CCTTTTCACAGTGGCGGTTAGCCTGTAACCACTTGAGGCGTCCGCTTTGA
GTTGGACCAGTTACGGATGTTGTAAGGCACTGGGCAGGGATCGTAACGGT
TACTGAAGACCAAACAACGACAACAACAACAACAACAACAACAACAGGAT
CGAACAGGAAAATGATCGGAGGAAAGCGTCCGAGGTGGCCATGAGGGCTC
AGATAGAGAAAGAGCTCGAAGAGCGCGTGGCCCGCGACATCCAGATCGAG
AGGGACCGGGTGGCCGCGGAGAGCGCGGCTCTCCAGGCCAAGATGAAAGA
GTTCGAGGAGGAGCGGGAGAAAGCTGCGCTGCGAGCGGCCGCGGAAGTCG
AGGCGCAGAAGGCGGCGGAAGCCGCGCTCGTCGCCAGGGAGCGCGCCGCC
GCGGAGTCGCTGGCCCTTGGGAGAGCCTTGTCGGCGAAGGTAAGGTTGTG
AGGGGATGGGTCTAGACGTGCCACCGATTAAGAGCGGCTAAGCTGGGGTT
GGGCGGTGCTGATAGTAGGGAGGACGGGGGTAGGTCGGGGCGTTGGTTAG
GCTGAGGGCGCGGTAAATTTATGGTGGCGGTGGTGGTAGCGGGGGCACGG
AAGGTGATGCAGATGAGGGCTATCACGGTATGCCTATTTCTCTGAAATCG
ACAGTGAGCAACACAACGAACAGGGGCACCGACACAAACAACGAGAACAA
CAACCACACCGACGATACCAACGACAGTCACGACGATTCCGTCCGTCGCA
TACCAACCGCCGTCGAACGAGCTTGAGGGCGACGAGATAAAGTCAAGAAA
TGTATGGTACATGGCTGAATCGCCTTGGCTACTTCATGATGGTTCCACGT
ACCTCTAGAGCGTTGGTGTGGACGACATACAAACTAACATACCTGTTCAC
GACTCAGGCGGACCTGGACGCAACAACCGCATCGAAGGAAGGACTCTCTT
CTGATCGCCGAGACCCCAGCGGACGGGAGGCCGGGACCGCCCCGGTGCCG
ATAGGGTATCTGGTCGGGGACAACGTGCAAGCTCTGTGCACCCCGGTGGG
CGGAGCGACCGGCTCCAAGGAGTACATCTCCGGGGAGGTGGCGCACGTCA
ACCCCGACGGATCCTTGGACGTTATCCTGGCGGACGGGAGAATGAGGCAG
GAGGTGCCAATTGCGGAGATCAAGTTCGTCAGTAGGTATGTATATCTGCC
CCCCCCAAGGTTGAAGCTCCAGCGTGTCGGAGATAGAGACATGAACGAGT
AATCCGCGATACGCACCTTGCTCGGGGCCAAAGCGTGGATTTACTGAGGC
ATGCTGAAAGGTTTGTGGTTGGATTCCGTCCAGGATGCACTCGAGTACCT
TACACGGACGTCCTGGGAACTGCCCAATCTGCGTCAGCTACACATGTAGG
ATCCCTCGACTTGTTCCCTCTGAACAGAATGTTATCTAAAAGGGATACAC
GTATTCCCAGCCCGCACATGGGACCTCACCTCGAAGTACAAAGTCTACAA
GGCAAGCTAGGTGCCGCAGCCGACCACAACGGTAGGCAAAGACTCACGTT
AAACGTATGCCTATTGGTCTTAAACGCAGGCAGCATGTGCGAGGACGCCA
CCACCCCCCCCCCTGCTCCCTTCGTATGGAAGCGACTCTGTCGTTAATGG
TACTATAGCGAACAGGCCCAAGAACAGCACGAAAAACAATATCACCTCCC
TCTCTCCTCGCATAACGAACTTGGACGCTTGAACGACTCGAGCTGGAGCG
GGAAAGTCCACTTTCTTCAGCTCTATCATGTCGCCAACAGTCCTTGAAGA
TCAACATCACACGAGGAAACAAAAGCGTGCTTGTCCCGCTCCCGCGCTCA
AAACACCCTGACGCCGGTGGCACCCGGTTTTCTTTCTCATCTTGAATGGG
CGGTCGAGCAGTAAGCACGTGCGGAACGGACCATCCCCTCCCCCCTGTGG
CCCGATCCATTGTCTCAGTACTGCGGGCATGCAAACAACGCCCCCCCCCG
CCCCCCCGCCCCCCCCTGCCCGTCCACCAGGTCCGAGCCGCCGTCACCAG
CGGGGTCGTCGGCCGGGGAGCAGTCTTTTTGGGATGGCAACGAGCAGGGA
AGCGAATCGTCTGCAGGACAGAACAGCGTAAGGTGAGGGAGTGAGGGGAG
GGGGGGAGGGAGAGAGGGAAATAGAACAGTTGGTCACGAAAGAGCGACTC
GTGTTTTGTCGGAAATCGAATCAGACGTGGCTCTCTTTTTCCGCCGCGCG
ACTGCTCCTCCTACAACCGCCAGGCCCGTCGTTTTTCCGTTTGACAAAGT
GGCCGGGATAGACAAGCTGCCATGTCACCGCCAGAGATATTGCCGGCATT
TGGTGCTAGTGCGAGCCGCTACTGTTTGCATCTCGGATGGTCTTCCATGG
ATGATAGGGTTCGCTCTAGTTTCAAATAGATAACTCGGCATACACTTTGG
ACGGGCGTCAACACTGGGATGAGCCACCCTGCTGCCTCTTGCTTTGGCCA
CAGCGTTCGTTTACCGCCGGACATACCTGCTACGAACAATAAAAAAAAGT
GCATAACGACCGCTCAACAATCCTCCAAAAACGGCTGTTTCTTTACCGGG
TGCTGCGATCCTTTGTGTCCTCTTGCGTGACGCAGGTCCTCTCCGTCTTC
TCCGAAGCACCTCCTCGAACAAACCCAATCGTTTGGTCATGAGATAAGCG
AGACAAAGGCACCGCATTCCCCGGCTGATGGTGAAGGCCTTCGGGATGGT
GGGAAACCCGGATGGCAGACCGCAACCAACGGCAGTCTCGACGACATTCT
GGGAACCAAGTTGCGAACCGCAGAGAAGGAAGCCGCACCCGCCACGCGGT
ACACGAGAGGAAAGGGCGGAGACGACGCGCCAGCGGCAGTGGCGGCGGTG
GCAGGGAGCAGAGAGACGCCGAAGAAACGGGGAAGCCTGGACGACATTCT
CGGAATAAAGGTTAACAGGCCGGACAGGAGGAGCATGCGAAACATCTTGG
AGGAAGGCGACAGCGTCGAGGTTTTAGTCCCGCCAGCGGATGGAAATGGT
GATGGAGGAG

Coding sequence (CDS) from alignment at chr_28:65467..76226+

>Ec-28_000090.2 ID=Ec-28_000090.2|Name=Ec-28_000090.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=3006bp|location=Sequence derived from alignment at chr_28:65467..76226+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGATAGGTCTCCTTCTCGGTTGCGAAGTGCAGGGGGGAGCGTTGCATC
TGGCGCCTCCATTCCTACGTCGCCAGAGAGTCAGTACGATGGCCGTGGTT
CCTTGGTGGGCCGTAGCACTCGAGCTGCTGACCATGCCCGAGACCAAGTG
CAGTCGGCTCTTGACGGTCTTCTCAGCGACGACGACCCGTCAAACCCTCG
ATCGCCACCTGGAAGGTATGCGCCATCCATGGACGGCACTCGATCGCCAG
GACAACCGGAAGCACAAGGACGGCGATCACTTGTCCCACCAGACCCTATT
ATTCCTATCGAAGCAAGCTATCCCCGCAGTGGTCGATCGTCGACTGACCT
GCTCTCTCCTGCTCGTAAAGCCTCATCAGTCAGGGCGGCCGCGGGCGGCG
GCGGGTACACACCTACTGGTGCGGGAGGCAGGAGAAAACGAAGCAGCGTA
CGGTCACCGAAAGGCTACAACATGGGGACGTCCCAAAGACAAGCCGTGAA
TATCTCCACGTTAGAAGGGCTACAAGTGTTCCTGGACGAAAAACAGAAGG
AGGTGGTCAAGGCACACGCTCGCCGAACGAACGAGCTCGAAGCGATGCTA
GCCAAGGAAGAGAGCTATTTTGGCACCTTGCTAGACATGGAGTTGGAGAA
GCAAGGAGTAGCGCTCAAGGCCGCGTCCGCAATGCTGAAGGGGGGCAAAA
CAGCTGACAAGAGTCTATTTCGGCGCGGTAGTAAGCGACTGTCCAACGAG
GGGGTGGATGGCGCGCTGAACGCCAAACACCTTGACGAGATAAAAAAAGC
CGAGCACCTCAAGAAAAAGCTCAAGGCGCATCATGACGAAGCGCGCGCCG
TTCTGGCCAAGAAGCTTCAAGTGGAGAATGCCAGGACGGGACGCGTGATA
AAGACAAACCTAGGCAAGTACGCGAACCCCAAGCTAGCCCAGGGTGCGAA
GGCTGCGGTCCTTGCGAGCGTGGTCGAATATCTCAACGGAGAAGAGTTCG
TCCGGATAGTGGCGGCGCCTCTGAACTACCAAAGCCCCGACTTTGTTCGC
GCGATGGAAGCCGAGTCAGGAGTGATGGAGATCAGCTTCAGCCCCACAAA
TGCGCGGCAGAGAAGTATGGCTTCTTTGCCGGTGGGCGCGCCTGACTACG
ACAGCAAGATGGCGCTGCTGCAAGAGCAGAAGGCAATAGAGCAACAACAG
AGGATGGAGGAAGAAGCCCTCCGGCGACAAGAGATGCTGGAGCGCGAGAA
TAAAGCAGCCATGGAGCAGGATGCCGCCGACGCTCTTGCAATGGCCAACG
CGGCGAATCAGAGGCGCTTGGAAGAGATGCAGAGGCAACAGGACGAAGAG
CTCGAGGAGCAGAGGCGCCAGCTGGATGAGCACCAGGAACACCTGCGTAG
AGAGGCAGAACTCGCAAGGATGCGGCACAAGGAAGAGCTCGACCTTCATC
GCGCTGAGATGGAGAGAGAGAGGGAAGCCGTCGAGGCCCGCCAGGCCGAG
GCAAAGCGCCTGCAGGAGGAGGAGCTAGAAAAGCAGCGGCAGGAGATGCG
ACGCAAGCACGAGGAGGACATGGAGCTACAGCGGCAGGAGCTTGCGAGGC
ACGCAGAGGAGGTGGCCAGGCACAAGGCCGAGCTTGCGAAACACAACGAG
GAGGCCAGGTTGGAGAAAGAAGCCTTGGAGGAGATGAGGCGACGCGAGAA
CGAAGCGGAGGAGGATGAGAGGCGGCGCCTGCAAGAAGCAGTTGCCAAAC
ACCAGGAGGAGACGAGGCTGGAGGCAGAGCGCGTCAAGGCGGAGCTGGAG
GCCCTCAAGCTGGAGCGAGAGGCCGTCGCGCAAGCGGAGAAGGCCGAGCG
CGAGGCAGAGGAGGAGGCTCGTCGAGCTAGAGAGGCTGAAGCTGCTGCAG
AGGCTCTGAGGATCGAACAGGAAAATGATCGGAGGAAAGCGTCCGAGGTG
GCCATGAGGGCTCAGATAGAGAAAGAGCTCGAAGAGCGCGTGGCCCGCGA
CATCCAGATCGAGAGGGACCGGGTGGCCGCGGAGAGCGCGGCTCTCCAGG
CCAAGATGAAAGAGTTCGAGGAGGAGCGGGAGAAAGCTGCGCTGCGAGCG
GCCGCGGAAGTCGAGGCGCAGAAGGCGGCGGAAGCCGCGCTCGTCGCCAG
GGAGCGCGCCGCCGCGGAGTCGCTGGCCCTTGGGAGAGCCTTGTCGGCGA
AGGCGGACCTGGACGCAACAACCGCATCGAAGGAAGGACTCTCTTCTGAT
CGCCGAGACCCCAGCGGACGGGAGGCCGGGACCGCCCCGGTGCCGATAGG
GTATCTGGTCGGGGACAACGTGCAAGCTCTGTGCACCCCGGTGGGCGGAG
CGACCGGCTCCAAGGAGTACATCTCCGGGGAGGTGGCGCACGTCAACCCC
GACGGATCCTTGGACGTTATCCTGGCGGACGGGAGAATGAGGCAGGAGGT
GCCAATTGCGGAGATCAAGTTCGTCAGTAGGTCCGAGCCGCCGTCACCAG
CGGGGTCGTCGGCCGGGGAGCAGTCTTTTTGGGATGGCAACGAGCAGGGA
AGCGAATCGTCTGCAGGACAGAACAGCGTAAGGTCCTCTCCGTCTTCTCC
GAAGCACCTCCTCGAACAAACCCAATCGTTTGGTCATGAGATAAGCGAGA
CAAAGGCACCGCATTCCCCGGCTGATGGTGAAGGCCTTCGGGATGGTGGG
AAACCCGGATGGCAGACCGCAACCAACGGCAGTCTCGACGACATTCTGGG
AACCAAGTTGCGAACCGCAGAGAAGGAAGCCGCACCCGCCACGCGGTACA
CGAGAGGAAAGGGCGGAGACGACGCGCCAGCGGCAGTGGCGGCGGTGGCA
GGGAGCAGAGAGACGCCGAAGAAACGGGGAAGCCTGGACGACATTCTCGG
AATAAAGGTTAACAGGCCGGACAGGAGGAGCATGCGAAACATCTTGGAGG
AAGGCGACAGCGTCGAGGTTTTAGTCCCGCCAGCGGATGGAAATGGTGAT
GGAGGA

Synonyms

The feature 'Ec-28_000090.2' has the following synonyms


Synonym
Esi0120_0014
Esi_0120_0014