Ec-27_007050.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-27_007050.1
Unique NameEc-27_007050.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length148
Homology
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BLAST of Ec-27_007050.1 vs. uniprot
Match: D7FY47_ECTSI (HGTP_anticodon domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY47_ECTSI)

HSP 1 Score: 280 bits (715), Expect = 4.290e-95
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 1 
Query:    1 MLHRAIFGSLERFFGILVENTAGTFPLWLAPEQMRLLPVTDVARDYCLEVQSKFKKAGLRVKVDRGSERLAKQIRTAEKERIPVMSVVGEKEVAAGTLAVRSRGFGDMGDVPIDELIASMLEADAAAKELHEFLEPKAKEAAEAVDV 441
            MLHRAIFGSLERFFGILVENTAGTFPLWLAPEQMRLLPVTDVARDYCLEVQSKFKKAGLRVKVDRGSERLAKQIRTAEKERIPVMSVVGEKEVAAGTLAVRSRGFGDMGDVPIDELIASMLEADAAAKELHEFLEPKAKEAAEAVDV
Sbjct:    1 MLHRAIFGSLERFFGILVENTAGTFPLWLAPEQMRLLPVTDVARDYCLEVQSKFKKAGLRVKVDRGSERLAKQIRTAEKERIPVMSVVGEKEVAAGTLAVRSRGFGDMGDVPIDELIASMLEADAAAKELHEFLEPKAKEAAEAVDV 147
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BLAST of Ec-27_007050.1 vs. uniprot
Match: A0A6H5JBI8_9PHAE (Threonine--tRNA ligase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBI8_9PHAE)

HSP 1 Score: 276 bits (706), Expect = 7.980e-87
Identity = 144/147 (97.96%), Postives = 146/147 (99.32%), Query Frame = 1 
Query:    1 MLHRAIFGSLERFFGILVENTAGTFPLWLAPEQMRLLPVTDVARDYCLEVQSKFKKAGLRVKVDRGSERLAKQIRTAEKERIPVMSVVGEKEVAAGTLAVRSRGFGDMGDVPIDELIASMLEADAAAKELHEFLEPKAKEAAEAVDV 441
            MLHRAIFGSLERFFGILVENTAGTFPLWLAPEQMRLLPVTDVARDYCLEVQSKFKKAGLRVKVDRGSERLAKQIRTAEKERIPVMSVVGEKEVAAGTLAVRSRGFGDMGDVP+DELIASMLEADAAAKELHEFLEPKA+EAAEA DV
Sbjct:  551 MLHRAIFGSLERFFGILVENTAGTFPLWLAPEQMRLLPVTDVARDYCLEVQSKFKKAGLRVKVDRGSERLAKQIRTAEKERIPVMSVVGEKEVAAGTLAVRSRGFGDMGDVPVDELIASMLEADAAAKELHEFLEPKAQEAAEAADV 697
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BLAST of Ec-27_007050.1 vs. uniprot
Match: A0A1E7EYI6_9STRA (Threonine--tRNA ligase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EYI6_9STRA)

HSP 1 Score: 179 bits (453), Expect = 2.880e-50
Identity = 85/120 (70.83%), Postives = 103/120 (85.83%), Query Frame = 1 
Query:    1 MLHRAIFGSLERFFGILVENTAGTFPLWLAPEQMRLLPVTDVARDYCLEVQSKFKKAGLRVKVDRGSERLAKQIRTAEKERIPVMSVVGEKEVAAGTLAVRSRGFGDMGDVPIDELIASM 360
            M+HRAIFGSLERFFGIL+EN  G FPLWLAPEQMRLLPVTD A+DYC EV  K KKAGLR++VDRG+ERL KQIR AE++R+P+M+VVGEKE+ +GTLAVRSR  GD+G   +D+L+A +
Sbjct:  486 MVHRAIFGSLERFFGILIENCEGNFPLWLAPEQMRLLPVTDAAQDYCYEVAKKAKKAGLRIEVDRGNERLPKQIRNAEQQRVPIMAVVGEKEMESGTLAVRSRKLGDLGSFTVDDLLAEL 605
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BLAST of Ec-27_007050.1 vs. uniprot
Match: A0A7R9ZRX6_9STRA (Threonine--tRNA ligase n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZRX6_9STRA)

HSP 1 Score: 170 bits (431), Expect = 4.840e-50
Identity = 88/147 (59.86%), Postives = 111/147 (75.51%), Query Frame = 1 
Query:    1 MLHRAIFGSLERFFGILVENTAGTFPLWLAPEQMRLLPVTDVARDYCLEVQSKFKKAGLRVKVDRGSERLAKQIRTAEKERIPVMSVVGEKEVAAGTLAVRSRGFGDMGDVPIDELIASMLEADAAAKELHEFLE---PKAKEAAEA 432
            M+HRAIFGSLERFFGIL+EN +G FPLWLAP Q++LLPVTD   DYC EV  K  +AG+RV+VDRG+ERLAKQIR AE++R+PVM+V+G KE+  G LAVRSR  GD+G   +++L+A M +    A EL +  E   PK KE A+A
Sbjct:  138 MVHRAIFGSLERFFGILIENCSGDFPLWLAPTQLKLLPVTDAVNDYCQEVAKKAARAGIRVEVDRGTERLAKQIRNAEQQRVPVMAVIGMKEMETGKLAVRSRKLGDLGSFVVEDLVAEMADCAEGAVELTKMGEVEPPKPKEEAKA 284
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BLAST of Ec-27_007050.1 vs. uniprot
Match: A0A7S2G0L6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G0L6_9STRA)

HSP 1 Score: 163 bits (413), Expect = 5.850e-49
Identity = 81/132 (61.36%), Postives = 105/132 (79.55%), Query Frame = 1 
Query:    1 MLHRAIFGSLERFFGILVENTAGTFPLWLAPEQMRLLPVTDVARDYCLEVQSKFKKAGLRVKVDRGSERLAKQIRTAEKERIPVMSVVGEKEVAAGTLAVRSRGFGDMGDVPIDELIASMLEADAAAKELHE 396
            M+HRAIFGS+ERFFGILVE+TAG  PLWLAP Q+RLLPVTD A+++C ++  + +K GLRV+VDRGSERLAKQIR AE+ RIP+M+VVGE E+ + TLAVRSR  GD+G +P+D ++  +  A   A E+ E
Sbjct:    6 MVHRAIFGSIERFFGILVESTAGDMPLWLAPVQLRLLPVTDQAQEWCRDLAKRARKMGLRVEVDRGSERLAKQIRNAEQARIPIMAVVGEAEMGSDTLAVRSRKAGDLGSLPVDNVLTLLQAASEQAIEMQE 137
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BLAST of Ec-27_007050.1 vs. uniprot
Match: A0A7S2S854_9STRA (Threonine--tRNA ligase n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S854_9STRA)

HSP 1 Score: 174 bits (440), Expect = 4.070e-48
Identity = 86/130 (66.15%), Postives = 103/130 (79.23%), Query Frame = 1 
Query:    1 MLHRAIFGSLERFFGILVENTAGTFPLWLAPEQMRLLPVTDVARDYCLEVQSKFKKAGLRVKVDRGSERLAKQIRTAEKERIPVMSVVGEKEVAAGTLAVRSRGFGDMGDVPIDELIASMLEADAAAKEL 390
            M+HRAIFGS+ERFFGILVENTAG FPLWLAP Q++LLPVTD   DYC+EV+ K  K GLRV+VDRGSERLAKQIR AEK R P+M+VVG KE+ +G LA+RSR  GD+G   ID  +  M+  D AA+E+
Sbjct:  548 MVHRAIFGSIERFFGILVENTAGDFPLWLAPTQLKLLPVTDAVMDYCMEVKKKGAKMGLRVEVDRGSERLAKQIRNAEKARTPLMAVVGMKEIESGKLAIRSRKEGDLGSFTIDAFLEEMIRCDTAAEEM 677
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BLAST of Ec-27_007050.1 vs. uniprot
Match: A0A1Z5K8X1_FISSO (Threonine--tRNA ligase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K8X1_FISSO)

HSP 1 Score: 169 bits (427), Expect = 2.330e-46
Identity = 81/130 (62.31%), Postives = 103/130 (79.23%), Query Frame = 1 
Query:    1 MLHRAIFGSLERFFGILVENTAGTFPLWLAPEQMRLLPVTDVARDYCLEVQSKFKKAGLRVKVDRGSERLAKQIRTAEKERIPVMSVVGEKEVAAGTLAVRSRGFGDMGDVPIDELIASMLEADAAAKEL 390
            M+HRAIFGS+ERFFGIL+EN +G FPLWLAP Q +LLPVTD   DYC EV +K KK G+RV+VDRGSERLAKQIR AE++R+P+M+VVG KE+    LAVRSR  GD+G   +D+L++ +    AAA+E+
Sbjct:  533 MVHRAIFGSMERFFGILIENCSGDFPLWLAPTQFKLLPVTDAVHDYCNEVAAKAKKMGIRVEVDRGSERLAKQIRNAEQQRVPIMAVVGVKEMETNNLAVRSRKLGDLGSFNVDDLLSELSRCSAAAEEM 662
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BLAST of Ec-27_007050.1 vs. uniprot
Match: A0A7S1GIN9_CYCTE (Threonine--tRNA ligase (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GIN9_CYCTE)

HSP 1 Score: 162 bits (409), Expect = 3.730e-46
Identity = 81/117 (69.23%), Postives = 96/117 (82.05%), Query Frame = 1 
Query:    1 MLHRAIFGSLERFFGILVENTAGTFPLWLAPEQMRLLPVTDVARDYCLEVQSKFKKAGLRVKVDRGSERLAKQIRTAEKERIPVMSVVGEKEVAAGTLAVRSRGFGDMGDVPIDELI 351
            M+HRAIFGS+ERFFGILVENTAG FPLWLAP Q++LLPVTD  +D+C EV +K K  GLRV+VDRG +RL KQIR AEK RIP+M+VVG KEV +GTLAVRSR  GD+G   +D L+
Sbjct:  217 MVHRAIFGSIERFFGILVENTAGDFPLWLAPVQLKLLPVTDSVQDFCAEVAAKAKARGLRVEVDRGMDRLPKQIRNAEKARIPIMAVVGVKEVESGTLAVRSRKNGDLGAFSVDALL 333
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BLAST of Ec-27_007050.1 vs. uniprot
Match: B8BYS4_THAPS (Threonine--tRNA ligase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BYS4_THAPS)

HSP 1 Score: 166 bits (421), Expect = 6.990e-46
Identity = 88/144 (61.11%), Postives = 105/144 (72.92%), Query Frame = 1 
Query:    1 MLHRAIFGSLERFFGILVENTAGTFPLWLAPEQMRLLPVTDVARDYCLEVQSKFKKAGLRVKVDRGSERLAKQIRTAEKERIPVMSVVGEKEVAAGTLAVRSRGFGDMGDVPIDELIASMLEADAAAKELHEFLEPKAKEAAEA 432
            M+HRAIFGS+ERFFGILVENTAG  P WLAP Q++LLPVTD   DYC EV  K  K GLRV+VDRG+ERLAKQIR AE+ RIPVM+VVG KE+  GTLA+RSR  GD+G   +D+L++ +   D  A E+    E   KE A A
Sbjct:  447 MVHRAIFGSIERFFGILVENTAGDLPFWLAPTQLKLLPVTDAVVDYCKEVAKKANKMGLRVEVDRGAERLAKQIRNAEQSRIPVMAVVGMKEMEEGTLALRSRKLGDLGSFAVDDLLSELKRCDDDAVEMTVMGEVAEKEEAPA 590
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BLAST of Ec-27_007050.1 vs. uniprot
Match: W7TEG8_9STRA (Threonyl-tRNA synthetase (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TEG8_9STRA)

HSP 1 Score: 157 bits (397), Expect = 8.300e-46
Identity = 79/137 (57.66%), Postives = 102/137 (74.45%), Query Frame = 1 
Query:    1 MLHRAIFGSLERFFGILVENTAGTFPLWLAPEQMRLLPVTDVARDYCLEVQSKFKKAGLRVKVDRGSERLAKQIRTAEKERIPVMSVVGEKEVAAGTLAVRSRGFGDMGDVPIDELIASMLEADAAAKELHEFLEPK 411
            M+HRAIFGS+ERFFGILVENTAG FPLW++P QMRLLPVTD A D+   ++ +   AG RV+VD GSERL KQIR AE+ RIPVM ++G KEV +G + VR+R  G +G   ++EL + ++ A  + KELHE LE +
Sbjct:   61 MVHRAIFGSIERFFGILVENTAGDFPLWMSPVQMRLLPVTDKAMDHAQAIKKRLSSAGFRVEVDPGSERLGKQIRNAEQARIPVMGIIGAKEVESGGVTVRTRLGGQLGLYGVEELASGLVSAVESTKELHEVLEKR 197
The following BLAST results are available for this feature:
BLAST of Ec-27_007050.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FY47_ECTSI4.290e-95100.00HGTP_anticodon domain-containing protein n=1 Tax=E... [more]
A0A6H5JBI8_9PHAE7.980e-8797.96Threonine--tRNA ligase n=1 Tax=Ectocarpus sp. CCAP... [more]
A0A1E7EYI6_9STRA2.880e-5070.83Threonine--tRNA ligase n=1 Tax=Fragilariopsis cyli... [more]
A0A7R9ZRX6_9STRA4.840e-5059.86Threonine--tRNA ligase n=1 Tax=Craspedostauros aus... [more]
A0A7S2G0L6_9STRA5.850e-4961.36Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2S854_9STRA4.070e-4866.15Threonine--tRNA ligase n=1 Tax=Eucampia antarctica... [more]
A0A1Z5K8X1_FISSO2.330e-4662.31Threonine--tRNA ligase n=2 Tax=Fistulifera solaris... [more]
A0A7S1GIN9_CYCTE3.730e-4669.23Threonine--tRNA ligase (Fragment) n=1 Tax=Cyclopho... [more]
B8BYS4_THAPS6.990e-4661.11Threonine--tRNA ligase n=1 Tax=Thalassiosira pseud... [more]
W7TEG8_9STRA8.300e-4657.66Threonyl-tRNA synthetase (Fragment) n=1 Tax=Nannoc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_27contigchr_27:6447881..6449831 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score280.8
Seed ortholog evalue3.7e-73
Seed eggNOG ortholog2880.D7FY47
Length444
KEGG rclassRC00055,RC00523
KEGG koko:K01868
KEGG ReactionR03663
KEGG Pathwayko00970,map00970
KEGG ModuleM00359,M00360
Hectar predicted targeting categoryother localisation
Gene idEc-27_007050.1
GOsGO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0007275,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009790,GO:0009791,GO:0009793,GO:0009987,GO:0010154,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0022414,GO:0032501,GO:0032502,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0048316,GO:0048608,GO:0048731,GO:0048856,GO:0061458,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.threonyl-tRNA aminoacylation
EggNOG OGsCOG0441@1,KOG1637@2759
EC6.1.1.3
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-27_007050Ec-27_007050Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_27 6447881..6449831 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_007050.1.3Ec-27_007050.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 6447881..6448087 -
Ec-27_007050.1.2Ec-27_007050.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 6448947..6449036 -
Ec-27_007050.1.1Ec-27_007050.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 6449685..6449831 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_007050.1CDS:Ec-27_007050.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_27 6447881..6448087 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_007050.1Ec-27_007050.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_27 6447881..6449831 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-27_007050.1 ID=Ec-27_007050.1|Name=Ec-27_007050.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=148bp
MLHRAIFGSLERFFGILVENTAGTFPLWLAPEQMRLLPVTDVARDYCLEV
QSKFKKAGLRVKVDRGSERLAKQIRTAEKERIPVMSVVGEKEVAAGTLAV
RSRGFGDMGDVPIDELIASMLEADAAAKELHEFLEPKAKEAAEAVDV*
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spliced messenger RNA

>Ec-27_007050.1 ID=Ec-27_007050.1|Name=Ec-27_007050.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=444bp|location=Sequence derived from alignment at chr_27:6447881..6449831- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGCTCCACCGCGCAATCTTCGGTTCGCTGGAGCGTTTCTTCGGCATCCT
GGTGGAGAACACCGCGGGCACCTTCCCCTTGTGGCTGGCACCGGAGCAGA
TGCGGCTGCTGCCCGTCACCGACGTTGCCAGGGACTACTGCCTAGAGGTG
CAGTCGAAGTTCAAGAAGGCCGGGCTCCGAGTGAAGGTGGACAGAGGGTC
AGAGCGGTTAGCCAAGCAGATCCGCACAGCAGAAAAGGAGCGCATCCCGG
TGATGTCCGTTGTCGGCGAGAAGGAGGTCGCCGCGGGGACCCTTGCCGTT
CGTTCAAGAGGGTTCGGCGACATGGGGGACGTGCCCATCGATGAGCTGAT
CGCCAGCATGCTCGAGGCAGATGCCGCCGCCAAGGAGCTGCACGAATTCC
TGGAGCCCAAGGCGAAGGAGGCGGCAGAAGCTGTGGACGTGTAA
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protein sequence of Ec-27_007050.1

>Ec-27_007050.1 ID=Ec-27_007050.1|Name=Ec-27_007050.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=148bp
MLHRAIFGSLERFFGILVENTAGTFPLWLAPEQMRLLPVTDVARDYCLEV
QSKFKKAGLRVKVDRGSERLAKQIRTAEKERIPVMSVVGEKEVAAGTLAV
RSRGFGDMGDVPIDELIASMLEADAAAKELHEFLEPKAKEAAEAVDV*
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mRNA from alignment at chr_27:6447881..6449831-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-27_007050.1 ID=Ec-27_007050.1|Name=Ec-27_007050.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1951bp|location=Sequence derived from alignment at chr_27:6447881..6449831- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGCTCCACCGCGCAATCTTCGGTTCGCTGGAGCGTTTCTTCGGCATCCT
GGTGGAGAACACCGCGGGCACCTTCCCCTTGTGGCTGGCACCGGAGCAGA
TGCGGCTGCTGCCCGTCACCGACGTTGCCAGGGACTACTGCCTAGAGGTA
TGTCCGTTGAGCTCCTACTATAGCAATGGCGACTTGGCGTAGCCGTAGTT
GTTGGTTGGATTCGCTGAGCTTTGATAATGTCGACTTGACGCTCATCGTA
GGCGAAGTCCTTTCTTGTTGTTCTTGTTGTTGTTGGTGGTGGTGGTGTTG
GTGTTGGTGGTGGTGGTGGTCCATTTTTTTTTCGCCTATTGTCTAACCAG
GTTTGCTTTCTCGAATCCGCCCGGGCGTACTCGTCAAGCGACAAGCAGTG
TTGTTTCGACTTTGTCGCCGACACTGCTGCTCCCTCAAACCCGTGGACGA
ATTATTTTTCAGGCCAGACGGCCCTCCTCTGCCTTTCAGACGGTGGTGCC
TCTGACACGGTTTGTACTCCCGGTTTTTTTCTCTTTTCCGTGCGGTATGT
ATTGTGGTCGTTCATTTTTCTGTTCTACTGTACATCTCTCTCTCTCTTTT
GCTCTCTGTTCTTGTGCCACGTACATGGGAAAATTGTCGTGCTTTTTTCT
TGGTTACAGCATTGTGAAGTAACGCGTGGTATGCCTGTCTCCATGATACT
TGGTTTGATTGGTATGGTTGTGTACGAAGGTGTTAGATACGGCATGGCAT
TGAACTCTTTTGCGTGGTTGTTTGGGCGGCATCGCGACGACACAGGTGCA
GTCGAAGTTCAAGAAGGCCGGGCTCCGAGTGAAGGTGGACAGAGGGTCAG
AGCGGTTAGCCAAGCAGATCCGCACAGCAGAAAAGGTGAGAATTGCTGCA
TGGTGTGGGGTGGTGTGGTGACGTTGCTTTTGGTGTGGGGTGAGCATCGG
CCATGTGTGTGGATACCAGGGTCGCAACGGCTACGGGTTTAACCCCAAGA
TCTAGACTAGGTCGTCAAGAGGGAACAGGGGGCGTTCGCCCGATTGACTT
ACACATGCCGTCTCTCATTCTGTTCGAGTCGAGACCTAGAGGTAGTAGAG
AGTGTCGAATGCCCCCCAAGTCCCCAGCATACGCCGCGCTACCCGTGGCC
ATGAACCCAAAACAATCGACGAGGACAAGGACAGGAAGACAGAGAGCTCC
TTTGGTCGGGTGTTGTACAGAACGCGAGGAGAATTTTGGGACTTGCGTGG
CTGTATGTACATACTCACGTAACGTTTCGGCCCGTGCTTCGTCAGCTTGT
ATACACTGGCGTCTGTGCGCTTTCGACGCAAAGAGTCCGCCCGGAACAAA
TCCGAAGAAGAATGGACGAGCCTCGATTCTCCAACCAACTAAACAACTTG
TCCACGTGACTTCCGTCGTCGAGTTGAGGTTGCGCTGCTGCTGACGCAGG
GATGGGATGTTGCCGTGGGCGTTGCGTTCACTGGAGTGTCGGGGGTACAC
ACACACACACACACACAATCTCTCTTGCCTGCCTGCAACCCCTCCCTCCC
TCGATTCAATCTACCAACGAGCTGCCTAATGCCTGCTTGGGTTCCCTACC
CCAACCCTGACCGCAACCCCATATAACCTAAAAGCTGCCGGATTTCTGTT
TCCACGCTTGTTCACCTCGGCAACGCTCTGTTTTCACGCTTCGCCCTATT
TTGCCCCCCCCCCAAAAAAAAAAAAAAAAACATGAAACCGCCAGGAGCGC
ATCCCGGTGATGTCCGTTGTCGGCGAGAAGGAGGTCGCCGCGGGGACCCT
TGCCGTTCGTTCAAGAGGGTTCGGCGACATGGGGGACGTGCCCATCGATG
AGCTGATCGCCAGCATGCTCGAGGCAGATGCCGCCGCCAAGGAGCTGCAC
GAATTCCTGGAGCCCAAGGCGAAGGAGGCGGCAGAAGCTGTGGACGTGTA
A
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Coding sequence (CDS) from alignment at chr_27:6447881..6449831-

>Ec-27_007050.1 ID=Ec-27_007050.1|Name=Ec-27_007050.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=444bp|location=Sequence derived from alignment at chr_27:6447881..6449831- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGCTCCACCGCGCAATCTTCGGTTCGCTGGAGCGTTTCTTCGGCATCCT
GGTGGAGAACACCGCGGGCACCTTCCCCTTGTGGCTGGCACCGGAGCAGA
TGCGGCTGCTGCCCGTCACCGACGTTGCCAGGGACTACTGCCTAGAGGTG
CAGTCGAAGTTCAAGAAGGCCGGGCTCCGAGTGAAGGTGGACAGAGGGTC
AGAGCGGTTAGCCAAGCAGATCCGCACAGCAGAAAAGGAGCGCATCCCGG
TGATGTCCGTTGTCGGCGAGAAGGAGGTCGCCGCGGGGACCCTTGCCGTT
CGTTCAAGAGGGTTCGGCGACATGGGGGACGTGCCCATCGATGAGCTGAT
CGCCAGCATGCTCGAGGCAGATGCCGCCGCCAAGGAGCTGCACGAATTCC
TGGAGCCCAAGGCGAAGGAGGCGGCAGAAGCTGTGGACGTGTAA
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Synonyms
The feature 'Ec-27_007050.1' has the following synonyms
Synonym
Esi0339_0038
Esi_0339_0038