Ec-27_007040.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR
Overview
Homology
BLAST of Ec-27_007040.1 vs. uniprot
Match: D7FY46_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY46_ECTSI) HSP 1 Score: 509 bits (1310), Expect = 3.830e-181 Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 1 Query: 1 MALTEPGTPPQXXXXXXXPHRNGGAKTRVGRPATTLVRGKKSGATKKVKVKGGARQQQPEGRGDVTPAAAVAGDGDEECNEGPRTALEVAVKMHRGALPEMLRLKEHFESSMRLDVGRLLYYMNLSLLQLVNHGRGGGGDVADAVEAVQRGLRVILRFPGLCRYKCWSHLCHTQLWCLALGPDREPYEELRAAYNPVRPSGSPLVPAFEHWQGMSDICNHVHCRRGERMGFAPSVADCVAKLTPGVLLLPTLPRTA 768 MALTEPGTPPQXXXXXXXPHRNGGAKTRVGRPATTLVRGKKSGATKKVKVKGGARQQQPEGRGDVTPAAAVAGDGDEECNEGPRTALEVAVKMHRGALPEMLRLKEHFESSMRLDVGRLLYYMNLSLLQLVNHGRGGGGDVADAVEAVQRGLRVILRFPGLCRYKCWSHLCHTQLWCLALGPDREPYEELRAAYNPVRPSGSPLVPAFEHWQGMSDICNHVHCRRGERMGFAPSVADCVAKLTPGVLLLPTLPRTA Sbjct: 1 MALTEPGTPPQXXXXXXXPHRNGGAKTRVGRPATTLVRGKKSGATKKVKVKGGARQQQPEGRGDVTPAAAVAGDGDEECNEGPRTALEVAVKMHRGALPEMLRLKEHFESSMRLDVGRLLYYMNLSLLQLVNHGRGGGGDVADAVEAVQRGLRVILRFPGLCRYKCWSHLCHTQLWCLALGPDREPYEELRAAYNPVRPSGSPLVPAFEHWQGMSDICNHVHCRRGERMGFAPSVADCVAKLTPGVLLLPTLPRTA 256
BLAST of Ec-27_007040.1 vs. uniprot
Match: D7FTE0_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTE0_ECTSI) HSP 1 Score: 88.6 bits (218), Expect = 9.430e-16 Identity = 57/168 (33.93%), Postives = 87/168 (51.79%), Query Frame = 1 Query: 283 RGALPEMLRLKEHFESSMRLD-VGRLLYYMNLSLLQLVNHGRGGGGDVADAVEAVQRGLRVILRFPGLCRYKCWSHLCHTQLWCLALGPDREPYEELRAAYNPVRPSGSPLVPAFEHWQGMSDICNHVHCR-----RGERMGF------APSVADCVAKLTPGVLLLP 750 R ALPEM L + ESS VG +LY+ N++ ++ + GD+ + E++Q + V+LR+PGL R++ SHL H L R+ Y+ +R YN V P G P +P +E W+ + +C HV CR R +R G APS ++ +PG + P Sbjct: 487 REALPEMTSLAKTLESSDTCSGVGGVLYHGNVAYMRAI------AGDLDKSFESLQACVDVVLRYPGLVRFR--SHLIHCMLAASHFFNRRDMYDAMRGVYNSVGPMGYPQIPPYEEWRTIRQVCPHVMCRSMEAERLQRYGEGPVQTNAPSEEPVTSEPSPGSMTSP 646
BLAST of Ec-27_007040.1 vs. uniprot
Match: D7FTD9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTD9_ECTSI) HSP 1 Score: 85.5 bits (210), Expect = 8.730e-15 Identity = 49/134 (36.57%), Postives = 73/134 (54.48%), Query Frame = 1 Query: 283 RGALPEMLRLKEHFESSMRLD-VGRLLYYMNLSLLQLVNHGRGGGGDVADAVEAVQRGLRVILRFPGLCRYKCWSHLCHTQLWCLALGPDREPYEELRAAYNPVRPSGSPLVPAFEHWQGMSDICNHVHCRRGE 681 R ALPEM L + ESS G +LY+ N++ ++ + GD+ A E++Q + V+LR+PGL R++ SHL H L R+ Y+ +R YN V P G P +P +E W+ + +C HV CR E Sbjct: 270 REALPEMASLAKTLESSDTCSGAGGVLYHGNVAYMRAI------AGDLDKAFESLQACVDVVLRYPGLVRFR--SHLIHCMLAASHFFNRRDMYDAMRGVYNSVGPMGYPQIPPYEEWRTIRQVCPHVLCRSME 395
BLAST of Ec-27_007040.1 vs. uniprot
Match: A0A6H5L0W7_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0W7_9PHAE) HSP 1 Score: 82.0 bits (201), Expect = 1.470e-13 Identity = 46/129 (35.66%), Postives = 71/129 (55.04%), Query Frame = 1 Query: 289 ALPEMLRLKEHFESSMRLD-VGRLLYYMNLSLLQLVNHGRGGGGDVADAVEAVQRGLRVILRFPGLCRYKCWSHLCHTQLWCLALGPDREPYEELRAAYNPVRPSGSPLVPAFEHWQGMSDICNHVHCR 672 ALPEM L + ESS VG +LY+ N++ ++ V G++ A E+++ + V+LR+PGL R+K SHL H L R+ Y+ ++ YN V P G P P +E W+ + +C H+ CR Sbjct: 492 ALPEMTSLAKTLESSDTCSGVGGVLYHGNVAYMRAV------AGELVKAFESLEACVDVVLRYPGLVRFK--SHLIHCMLAASHFFNRRDMYDAMKRVYNSVGPMGYPQAPPYEEWRTIRQVCPHILCR 612
BLAST of Ec-27_007040.1 vs. uniprot
Match: D7FTD6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTD6_ECTSI) HSP 1 Score: 81.6 bits (200), Expect = 1.480e-13 Identity = 43/131 (32.82%), Postives = 71/131 (54.20%), Query Frame = 1 Query: 292 LPEMLRLKEHFE-SSMRLDVGRLLYYMNLSLLQLVNHGRGGGGDVADAVEAVQRGLRVILRFPGLCRYKCWSHLCHTQLWCLALGPDREPYEELRAAYNPVRPSGSPLVPAFEHWQGMSDICNHVHCRRGE 681 LPEM RL + E S++ VG L Y+ N++ ++ VN GDV D ++ +Q ++LR+PG+ R++ H H L R+ Y+ + YN +RP G P +E W+ ++ IC+++ CR E Sbjct: 166 LPEMTRLTKTLERSNVCSGVGGLFYHSNVAYMKTVN------GDVEDLIKCLQASADIVLRYPGIVRFR--PHFIHCTLAVSHFSKRRDMYDAMNGVYNSIRPPGCWRAPPYEEWRTITQICDNMFCRSFE 288
BLAST of Ec-27_007040.1 vs. uniprot
Match: A0A6H5L0K0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0K0_9PHAE) HSP 1 Score: 73.9 bits (180), Expect = 7.210e-11 Identity = 43/133 (32.33%), Postives = 68/133 (51.13%), Query Frame = 1 Query: 283 RGALPEMLRLKEHFE----SSMRLDVGRLLYYMNLSLLQLVNHGRGGGGDVADAVEAVQRGLRVILRFPGLCRYKCWSHLCHTQLWCLALGPDREPYEELRAAYNPVRPSGSPLVPAFEHWQGMSDICNHVHC 669 R ALPEM L + E + R V + N++ ++ V G++ A E+++ + V+LR+PGL R++ SHL H L R+ Y+ +R YN V P G P VP +E W+ + +C H+ C Sbjct: 483 REALPEMTSLAKTLERFVPTRARASVVFSITGDNVAYMRAV------AGELVKAFESLEACVDVVLRYPGLVRFRRTSHLIHCMLAASHFFNRRDMYDAMRGVYNSVGPMGYPQVPPYEEWRTIRQVCPHILC 609 The following BLAST results are available for this feature:
BLAST of Ec-27_007040.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ec-27_007040.1 ID=Ec-27_007040.1|Name=Ec-27_007040.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=257bpback to top spliced messenger RNA >Ec-27_007040.1 ID=Ec-27_007040.1|Name=Ec-27_007040.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=955bp|location=Sequence derived from alignment at chr_27:6442901..6445536+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon. ATGGCCTTGACTGAACCAGGTACCCCCCCGCAACAGCGACAGCAGCAGCAback to top protein sequence of Ec-27_007040.1 >Ec-27_007040.1 ID=Ec-27_007040.1|Name=Ec-27_007040.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=257bp MALTEPGTPPQQRQQQQQPHRNGGAKTRVGRPATTLVRGKKSGATKKVKVback to top mRNA from alignment at chr_27:6442901..6445536+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Ec-27_007040.1 ID=Ec-27_007040.1|Name=Ec-27_007040.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=2636bp|location=Sequence derived from alignment at chr_27:6442901..6445536+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)back to top Coding sequence (CDS) from alignment at chr_27:6442901..6445536+ >Ec-27_007040.1 ID=Ec-27_007040.1|Name=Ec-27_007040.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=771bp|location=Sequence derived from alignment at chr_27:6442901..6445536+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)back to top Synonyms
The feature 'Ec-27_007040.1' has the following synonyms
|