Ec-27_007010.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-27_007010.1
Unique NameEc-27_007010.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length367
Homology
[Close]
BLAST of Ec-27_007010.1 vs. uniprot
Match: A0A6H5JPD9_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPD9_9PHAE)

HSP 1 Score: 674 bits (1739), Expect = 3.470e-242
Identity = 360/383 (93.99%), Postives = 365/383 (95.30%), Query Frame = 2 
Query:    8 RRELGPRRG-WVWAMTDVEAQISADEALARRIQANEQQRESTPLISLTNRQPIMNVASINESNEGNSGGGRIGLGELIQQAGSDEAETQPATRRPVNRATNRNVR---MHIADDGVRGMNASRLGLLLLTLVNLPLIAAGVVILTLHWQDTDVCDVEHRRKWKWWALLSVVRMMLITPVVMVRWRVEGQREEDRNQAIDHLSSNMRNSLDIVGLVWFVIGHMWLLQNQGCDNPRDSPIYQLCLVYIIITYIHICLPCILLMLLVPVXXXXXXXXIRLMGMLQGPQRRKGARQDEIEKLPVVKYREVQDMEDDACAICLVEYEAEDELRKLPCRHAFHKTCVDSWLAVNASCPNCRARCFEEEDGEGEEKIADDAPAPVGDNLA 1144
            RRE   R G  V  MTDVEAQISADEALARRIQANE QRESTPLISLTNRQ IMNVASINESNEGNSG GRIGLGELIQQAGSDEAETQPATRRPVNRATNRNVR   MHIADDGVRG++ASRL LLLLTLVNLPLIAAGVVIL LHWQDTDVCDV+HRRKWKWWALLSVVRMMLITPVVMVRWRVEGQREEDRNQAIDHLSSNMRNSLDIVGLVWFVIGHMWLLQNQGCDNPRDSPIYQLCLVYIIITYIHICLPCILLMLLVPVXXXXXXXXIRLMGMLQGPQR KGARQDEIEKLPVVKYREVQDMEDDACAIC+V+YEAEDELRKLPCRHAFHKTCVDSWLAVNASCPNCRARCFEE DGEGEEKIADDAPAPVGDNLA
Sbjct:   50 RRESEGRGGVGVGQMTDVEAQISADEALARRIQANEHQRESTPLISLTNRQAIMNVASINESNEGNSGSGRIGLGELIQQAGSDEAETQPATRRPVNRATNRNVRHVWMHIADDGVRGLSASRLSLLLLTLVNLPLIAAGVVILILHWQDTDVCDVDHRRKWKWWALLSVVRMMLITPVVMVRWRVEGQREEDRNQAIDHLSSNMRNSLDIVGLVWFVIGHMWLLQNQGCDNPRDSPIYQLCLVYIIITYIHICLPCILLMLLVPVXXXXXXXXIRLMGMLQGPQRLKGARQDEIEKLPVVKYREVQDMEDDACAICIVDYEAEDELRKLPCRHAFHKTCVDSWLAVNASCPNCRARCFEE-DGEGEEKIADDAPAPVGDNLA 431
[Close]
BLAST of Ec-27_007010.1 vs. uniprot
Match: D7FY42_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY42_ECTSI)

HSP 1 Score: 250 bits (638), Expect = 9.460e-80
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 2 
Query:  320 MHIADDGVRGMNASRLGLLLLTLVNLPLIAAGVVILTLHWQDTDVCDVEHRRKWKWWALLSVVRMMLITPVVMVRWRVEGQREEDRNQAIDHLSSNMRNSLDIVGLVWFVIGHMWLLQNQG 682
            MHIADDGVRGMNASRLGLLLLTLVNLPLIAAGVVILTLHWQDTDVCDVEHRRKWKWWALLSVVRMMLITPVVMVRWRVEGQREEDRNQAIDHLSSNMRNSLDIVGLVWFVIGHMWLLQNQG
Sbjct:    1 MHIADDGVRGMNASRLGLLLLTLVNLPLIAAGVVILTLHWQDTDVCDVEHRRKWKWWALLSVVRMMLITPVVMVRWRVEGQREEDRNQAIDHLSSNMRNSLDIVGLVWFVIGHMWLLQNQG 121
[Close]
BLAST of Ec-27_007010.1 vs. uniprot
Match: A0A7S2V5V5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5V5_9STRA)

HSP 1 Score: 247 bits (630), Expect = 3.370e-75
Identity = 139/303 (45.87%), Postives = 195/303 (64.36%), Query Frame = 2 
Query:  248 GSDEAETQPATRRPVNRATNRNVRMHIADDGVRGMNASRLGLLLLTLVNLPLIAAGVVILTLHWQDTDVCDVEHRRKWKWWALLSVVRMMLITPVVMVRWRVEGQREEDRNQAIDHLSSNMRNSLDIVGLVWFVIGHMWLL-QNQGCDNPRDSPIYQLCLVYIIITYIHICLPCILLMLLVPVXXXXXXXXIRLMGMLQGPQRRKGARQDEIEKLPVVKYRE-VQDMEDDACAICLVEYEAEDELRKLPCRHAFHKTCVDSWLAVNASCPNCRARCFEEEDGEGEEKIADDAPAP---VGDNL 1141
            G+  A T P TR       NR VRM++    +R +N  +L +L+  LVN+P I A + +L+LHW DT  CD E R++W+WWAL+S VRM + T V++V +     R  D  +    L SN+RN +D +GL+WFV+G+MWL  Q++ CDNP  SPIYQLC+  ++ITYIHICLPC++       XXXXXXXX R++  LQ P R KGA Q  I++L  +K++  V ++E++ C ICL ++   D LR LPC H FH++CVD WL +NASCPNCR+   EE + E E+ + DD+      VGD +
Sbjct:   65 GAVVAVTTPGTR------DNRRVRMNVLGTSMREVNNRKLVVLVTLLVNIPQIVAAIAVLSLHWGDTFACDPERRQRWRWWALISTVRMAIYTVVMVVLYFFTLHRPRDSREVA--LLSNLRNGVDALGLIWFVVGNMWLFGQSESCDNPGSSPIYQLCVAMLLITYIHICLPCLIXXXXXXXXXXXXXXXXRVLSRLQDPMRGKGANQAAIDRLEAIKFQPGVTEVEEETCPICLTDFVEGDGLRLLPCDHCFHQSCVDEWLLLNASCPNCRSTILEEGE-EDEDSLEDDSEVARLHVGDQI 358
[Close]
BLAST of Ec-27_007010.1 vs. uniprot
Match: A0A7S3XQH4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQH4_HETAK)

HSP 1 Score: 244 bits (623), Expect = 3.430e-75
Identity = 125/264 (47.35%), Postives = 178/264 (67.42%), Query Frame = 2 
Query:  305 NRNVRMHIADDGVRGMNASRLGLLLLTLVNLPLIAAGVVILTLHWQDTDVCDVEHRRKWKWWALLSVVRMMLITPVVMVRWRVEGQREEDRNQAIDHLSSNMRNSLDIVGLVWFVIGHMWLL-QNQGCDNPRDSPIYQLCLVYIIITYIHICLPCILLMLLVPVXXXXXXXXIRLMGMLQGPQRRKGARQDEIEKLPVVKYR-EVQDMEDDACAICLVEYEAEDELRKLPCRHAFHKTCVDSWLAVNASCPNCRARCFEEEDGE 1090
            N+ VRM++  +G+R +N  RL + L  +VNLP + A  V+L+LHW D  VCD +HR +WKWWA ++  R+ + T +++  + V  +R  D  + I  + SN RN +D +GL+WFV+G+MWL  Q + CD    SP+YQLC+  +++TY+HICLPC++       XXXXXXXX R++  LQ P R KGA Q  I+KL ++KYR ++ ++E+  C ICL EYE  +ELR LPC+H+FHK CVD WL VNA+CPNCR    +EE  E
Sbjct:   11 NQRVRMNVLQNGIREVNNRRLVVFLTLVVNLPQLVAAAVVLSLHWDDDAVCDADHRERWKWWAAVAAARLAVYTGLLVALYLVLLRRPRDAREVI--VLSNARNGVDALGLIWFVVGNMWLFGQTESCDGAGASPVYQLCVAMLLVTYLHICLPCLIXXXXXXXXXXXXXXXXRVLARLQDPMRGKGANQAAIDKLKIIKYRPDLPEIEEPTCPICLNEYENGEELRSLPCKHSFHKKCVDEWLLVNATCPNCRTTILDEEQEE 272
[Close]
BLAST of Ec-27_007010.1 vs. uniprot
Match: D7FY41_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY41_ECTSI)

HSP 1 Score: 230 bits (586), Expect = 6.990e-72
Identity = 115/123 (93.50%), Postives = 115/123 (93.50%), Query Frame = 2 
Query:  776 MLLVPVXXXXXXXXIRLMGMLQGPQRRKGARQDEIEKLPVVKYREVQDMEDDACAICLVEYEAEDELRKLPCRHAFHKTCVDSWLAVNASCPNCRARCFEEEDGEGEEKIADDAPAPVGDNLA 1144
            MLLVPV        IRLMGMLQGPQRRKGARQDEIEKLPVVKYREVQDMEDDACAICLVEYEAEDELRKLPCRHAFHKTCVDSWLAVNASCPNCRARCFEEEDGEGEEKIADDAPAPVGDNLA
Sbjct:    1 MLLVPVLCFCLPCVIRLMGMLQGPQRRKGARQDEIEKLPVVKYREVQDMEDDACAICLVEYEAEDELRKLPCRHAFHKTCVDSWLAVNASCPNCRARCFEEEDGEGEEKIADDAPAPVGDNLA 123
[Close]
BLAST of Ec-27_007010.1 vs. uniprot
Match: A0A7S2DZB6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DZB6_9STRA)

HSP 1 Score: 220 bits (560), Expect = 7.290e-65
Identity = 111/262 (42.37%), Postives = 169/262 (64.50%), Query Frame = 2 
Query:  311 NVRMHIADDGVRGMNASRLGLLLLTLVNLPLIAAGVVILTLHWQDTDVCDVEHRRKWKWWALLSVVRMMLITPVVMVRWRVEGQ-REEDRNQAIDHLSSNMRNSLDIVGLVWFVIGHMWLLQNQG------CDNPRDSPIYQLCLVYIIITYIHICLPCILLMLLVPVXXXXXXXXIRLMGMLQGPQRRKGARQDEIEKLPVVKYREVQDMEDD-----ACAICLVEYEAEDELRKLPCRHAFHKTCVDSWLAVNASCPNCR 1060
            NVR+++ +D +R +++SR+ +  L L N P I A +V+L+LHW D  VCD EHR KW+ WAL++ +RM+L    + +   V     ++DR   +  +  N+RN LD  GLVWF++G+MWL           C  P  SPIY LCL  ++  YIHICLPCI+ +L++PV   XXXXXI ++  ++ P+  KGA +  I+KLP+VK+R++ D+E       +C ICL+++  +DE+R LPC+H FH  C+  WL +N++CP+CR
Sbjct:   61 NVRVNVLNDSLREVSSSRIAVSALILFNFPQIVAAIVVLSLHWPDDSVCDAEHRLKWRVWALIATIRMVLHMVTIFLIIGVSRMVTQQDRQTRLLMILHNLRNLLDAAGLVWFLVGNMWLFGGSDEKVTTVCVRPTQSPIYNLCLAMVVFNYIHICLPCIVAILMIPVLCFXXXXXIHMLRWMRDPEEGKGASEAAIKKLPLVKFRDLSDVESTMSSQLSCPICLMDFGPDDEVRILPCKHYFHDQCIGEWLGMNSTCPSCR 322
[Close]
BLAST of Ec-27_007010.1 vs. uniprot
Match: A0A835Z0W6_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0W6_9STRA)

HSP 1 Score: 191 bits (486), Expect = 1.270e-54
Identity = 103/257 (40.08%), Postives = 149/257 (57.98%), Query Frame = 2 
Query:  371 LLLLTLVNLPLIAAGVVILTLHWQDTDVCDVEHRRKWKWWALLSVVRMMLITPVVMVRWRVEGQREEDRNQAIDHLSSNMRNSLDIVGLVWFVIGHMWLL--QNQGCDNPRDSPIYQLCLVYIIITYIHICLPCILLMLLVPVXXXXXXXXIRLMGMLQGPQRRKGARQDEIEKLPVVKYREVQDME------------------------DDACAICLVEYEAEDELRKLPCRHAFHKTCVDSWLAVNASCPNCRA 1063
            ++L  +VN+P I  G  +L  HW+D   CD EHR +W+ W++L +  +   T +    WR  G+   D    + H  +  +N+L+ +GL+WFV G++WL   Q++GC +   S IYQLCLV I++ Y+ ICLPC+L +L+VPV  XXXXXX R++     P   +GA Q  I+ LP+VKY +                             + AC ICL +Y   DELR+LPC HA H+ C+DSWLA++A+CPNCRA
Sbjct:    1 MILTAIVNIPQIIGGAFVLAAHWRDDAACDAEHRARWRVWSVLELAIIAGHTAIRAATWRA-GEARAD----VSHALATAKNALEALGLIWFVAGNLWLFGGQDEGCQDASSSAIYQLCLVLIVVLYVQICLPCLLAVLMVPVLCXXXXXXXRVLSYFHDPMAGRGASQCAIDALPIVKYGDTSAXXXXXXXXXXXXXXXXXGALPTGAALETACPICLNDYAVGDELRQLPCAHALHRACLDSWLAISATCPNCRA 252
[Close]
BLAST of Ec-27_007010.1 vs. uniprot
Match: A0A7S1U290_9STRA (Hypothetical protein n=5 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U290_9STRA)

HSP 1 Score: 184 bits (468), Expect = 2.650e-51
Identity = 111/293 (37.88%), Postives = 168/293 (57.34%), Query Frame = 2 
Query:  245 AGSDEAETQPATRRPVNRATNRNVRMHIADDGVRGMNASRLGLLLLTLVNLPLIAAGVVILTLHWQDTDVCDVEHRRKWKWWALLSVVRMMLITPVV-MVRWRVEGQREEDRNQAI------------DHLSSNMRNSLDIVGLVWFVIGHMWLLQNQGCDNPRD-SPIYQLCLVYIIITYIHICLPCILLMLLVPVXXXXXXXXIRLMGMLQGPQ---RRKGARQDEIEKLPVVKYREVQDMEDD--ACAICLVEYEAEDELRKLPCRHAFHKTCVDSWLAVNASCPNCRAR 1066
            AG+  A  Q A RR         +R++ A++G R + +SR  LL+   V +P IAAG+ +L  +W D + CD+EH  KW+WWAL+SVVRM     V+ M    V+ +R   R   +            D L+   ++ +D++GLVWF+IG++W+L +      +  S ++ LC+ +I++ YI ICLPC + +  +PV        +R M  +Q  +    R+GA +D I+++P+ K+   Q   DD   CAICL EY  ED+LR L C HAFHK C+D WL +N SCP+CRA+
Sbjct:   15 AGAVGARQQRAARR---------LRLNAAEEGWRRILSSRTLLLITMGVYVPQIAAGIGVLATNWNDPNACDLEHLLKWRWWALVSVVRMAAFLLVMTMDHVLVDEERSPLREFVLRTGGEEQLILWHDKLARG-KHLVDVLGLVWFIIGNLWVLSDDDSSPGQGKSALFILCVFFIVVYYIQICLPCAVAVAAIPVLCFCLPCLLRFMVRMQDAEAHAERRGAEEDVIDRIPIRKFASSQLSSDDDATCAICLCEYADEDQLRVLHCGHAFHKDCLDPWLRLNGSCPSCRAK 297
[Close]
BLAST of Ec-27_007010.1 vs. uniprot
Match: A0A4D9DBP5_9STRA (RING-type domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DBP5_9STRA)

HSP 1 Score: 179 bits (453), Expect = 4.100e-48
Identity = 99/267 (37.08%), Postives = 145/267 (54.31%), Query Frame = 2 
Query:  389 VNLPLIAAGVVILTLHWQDTDVCDVEHRRKWKWWALLSVVRMMLITPVVMVRWRVEGQREEDRNQAIDHLSSNMRNSLDIVGLVWFVIGHMWLLQN--QGCDNPRDSPIYQLCLVYIIITYIHICLPCILLMLLVPVXXXXXXXXIRLMGMLQGPQRRKGARQDEIEKLPVVKYREVQ-----------------------------------DMEDDACAICLVEYEAEDELRKLPCRHAFHKTCVDSWLAVNASCPNCRARCFEE 1078
            VN+P I A VVIL+ +W DT  C+     KWK +AL++ +RM L    V   +R+ G+        +    S+ RN LD  GL+WFV+G+MWL     + C +P  SP+Y LC+ ++ I Y  +CLPC+++++++PV   XXXX IR++  +Q P R KGA    I KLP++K R++Q                                   +    +CA+C+ EY  ++++R LPC H FH +CVD WL VNASCP CRA    E
Sbjct:   76 VNIPQIIAAVVILSKYWHDTT-CEPSETTKWKTYALIAALRMFLYVSSVSALYRLNGRMPATTR--LMRFLSHARNGLDAFGLIWFVVGNMWLFGGDVEICPHPNRSPVYSLCVAFVFINYAQLCLPCVVVIIMLPVLCFXXXXLIRILARIQDPMRGKGATPSMINKLPMMKSRQIQAEKAATASAGSLEGQAAPPASQGGEQDTQVSVTGVESNSTSCAVCISEYAPDEDVRLLPCAHYFHASCVDEWLKVNASCPTCRASILPE 339
[Close]
BLAST of Ec-27_007010.1 vs. uniprot
Match: A0A7S3JXT6_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JXT6_9STRA)

HSP 1 Score: 170 bits (430), Expect = 4.800e-45
Identity = 103/275 (37.45%), Postives = 146/275 (53.09%), Query Frame = 2 
Query:  389 VNLPLIAAGVVILTLHWQ-DTDVCDVEHRRKWKWWALLSVVRMMLITPVVMVRWRV--------EGQREED-RNQAIDHLSSNMRNSLDIVGLVWFVIGHMWLL---------QNQGCDNPRDSPIYQLCLVYIIITYIHICLPCILLMLLVPVXXXXXXXXIRLMGMLQGPQRRKGARQDEIEKLPVVKYREVQDM--EDDACAICLVEYEAEDELRKLPCRHAFHKTCVDSWLAVNASCPNCRARCFEEEDGEGEEKIADDAP---APVGDNL 1141
            VN P IA   +I  ++W  D+ +CD   RR W+ W L+   R+   T V  +RWR         + Q  ED   +  + L +N RNSLD V L+WFV G+MWLL         Q    D+P  SPIY + ++ + I Y  ICLPC+  + +VPV        IRL+  LQ P+  +GA +  I +LP+  Y    ++  E+ +C ICL E +    LR LPC+HAFH+ C+D WL  NASCP CR   F      G+++ +D+A    AP G  +
Sbjct:  130 VNAPQIATVFIIFPIYWHADSRLCDAALRRYWRVWGLVHAARLCATTVVAGLRWRFTPPPRRPDQPQPPEDPARRRANALIANARNSLDAVALIWFVFGNMWLLGGSDDSCNQQGNKHDDPTKSPIYLVDIIMLAIQYAQICLPCVFAIAMVPVFCFCLPCVIRLLAALQLPEHSRGASRRAISRLPLKPYTPGMELGYEEPSCPICLREVQLGHRLRVLPCKHAFHRRCIDEWLNRNASCPLCRRSIFTT---SGQDRTSDNASQETAPRGGTI 401
The following BLAST results are available for this feature:
BLAST of Ec-27_007010.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JPD9_9PHAE3.470e-24293.99RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FY42_ECTSI9.460e-80100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2V5V5_9STRA3.370e-7545.87Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3XQH4_HETAK3.430e-7547.35Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
D7FY41_ECTSI6.990e-7293.50RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A7S2DZB6_9STRA7.290e-6542.37Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A835Z0W6_9STRA1.270e-5440.08RING-type domain-containing protein n=1 Tax=Tribon... [more]
A0A7S1U290_9STRA2.650e-5137.88Hypothetical protein n=5 Tax=Phaeomonas parva TaxI... [more]
A0A4D9DBP5_9STRA4.100e-4837.08RING-type domain-containing protein n=1 Tax=Nannoc... [more]
A0A7S3JXT6_9STRA4.800e-4537.45Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_27contigchr_27:6403273..6412134 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score233.4
Seed ortholog evalue1.7e-58
Seed eggNOG ortholog2880.D7FY41
Length1219
KEGG koko:K10635
Hectar predicted targeting categoryother localisation
Gene idEc-27_007010.1
EggNOG free text desc.ubiquitin-protein transferase activity
EggNOG OGsKOG0800@1,KOG0800@2759
EC2.3.2.27
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko04121
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-27_007010Ec-27_007010Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_27 6403273..6412134 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_007010.1Ec-27_007010.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_27 6403344..6412087 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_007010.1.8Ec-27_007010.1.8Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 6403273..6403478 -
Ec-27_007010.1.7Ec-27_007010.1.7Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 6404199..6404314 -
Ec-27_007010.1.6Ec-27_007010.1.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 6404967..6405147 -
Ec-27_007010.1.5Ec-27_007010.1.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 6405825..6405858 -
Ec-27_007010.1.4Ec-27_007010.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 6406738..6406880 -
Ec-27_007010.1.3Ec-27_007010.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 6407285..6407504 -
Ec-27_007010.1.2Ec-27_007010.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 6411342..6411556 -
Ec-27_007010.1.1Ec-27_007010.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 6412031..6412134 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_0070103UTR:Ec-27_007010.1Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_27 6403273..6403343 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_007010.1CDS:Ec-27_007010.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_27 6403344..6403478 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_0070105UTR:Ec-27_007010.1Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_27 6412088..6412134 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-27_007010.1 ID=Ec-27_007010.1|Name=Ec-27_007010.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=367bp
MTDVEAQISADEALARRIQANEQQRESTPLISLTNRQPIMNVASINESNE
GNSGGGRIGLGELIQQAGSDEAETQPATRRPVNRATNRNVRMHIADDGVR
GMNASRLGLLLLTLVNLPLIAAGVVILTLHWQDTDVCDVEHRRKWKWWAL
LSVVRMMLITPVVMVRWRVEGQREEDRNQAIDHLSSNMRNSLDIVGLVWF
VIGHMWLLQNQGCDNPRDSPIYQLCLVYIIITYIHICLPCILLMLLVPVL
CFCLPCVIRLMGMLQGPQRRKGARQDEIEKLPVVKYREVQDMEDDACAIC
LVEYEAEDELRKLPCRHAFHKTCVDSWLAVNASCPNCRARCFEEEDGEGE
EKIADDAPAPVGDNLA*
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spliced messenger RNA

>Ec-27_007010.1 ID=Ec-27_007010.1|Name=Ec-27_007010.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1219bp|location=Sequence derived from alignment at chr_27:6403273..6412134- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
TGCTGCAAGGAGAGAGCTAGGGCCGAGGAGGGGTTGGGTTTGGGCAAATG
ACAGACGTGGAGGCTCAAATCTCCGCGGATGAAGCACTAGCAAGGAGGAT
TCAGGCGAACGAGCAGCAACGTGAGAGCACCCCCCTCATCAGCCTCACCA
ACCGACAACCCATCATGAATGTTGCCAGCATAAACGAGTCAAATGAAGGC
AACAGCGGCGGCGGAAGAATTGGTTTGGGAGAGCTGATCCAGCAGGCGGG
GAGCGATGAGGCAGAGACGCAGCCGGCGACTAGAAGGCCGGTTAACAGGG
CTACCAACAGGAACGTCAGGATGCACATAGCCGACGATGGCGTGCGTGGT
ATGAACGCTAGCAGGCTTGGCCTCCTCCTGCTCACCCTCGTGAACCTCCC
GCTGATTGCGGCTGGCGTGGTTATCCTAACCCTGCACTGGCAAGACACGG
ACGTCTGCGACGTGGAACACAGACGGAAGTGGAAGTGGTGGGCGCTGTTG
TCGGTCGTGAGGATGATGCTCATTACCCCAGTGGTGATGGTGAGATGGAG
GGTGGAGGGTCAGAGAGAAGAAGACCGGAACCAGGCGATCGACCACCTGT
CTAGCAACATGCGGAATTCTCTGGACATTGTCGGGCTCGTGTGGTTCGTA
ATCGGACACATGTGGTTGCTGCAAAATCAAGGGTGTGACAACCCGAGGGA
CTCGCCGATCTACCAGCTGTGCCTGGTGTACATCATCATAACGTACATAC
ACATCTGCCTGCCCTGCATCCTGCTGATGCTGCTGGTGCCGGTGCTGTGC
TTCTGCCTGCCGTGCGTGATCCGGTTGATGGGCATGCTGCAAGGACCGCA
GAGACGGAAAGGGGCTAGGCAGGATGAAATCGAGAAGCTACCCGTTGTCA
AGTATCGTGAGGTGCAAGACATGGAAGACGACGCGTGCGCCATTTGTCTT
GTGGAGTATGAAGCAGAGGACGAGCTCAGAAAGCTTCCCTGCCGGCATGC
CTTCCACAAAACGTGCGTGGACAGCTGGTTGGCCGTGAATGCGAGCTGTC
CCAACTGCAGGGCGCGCTGCTTCGAAGAAGAGGACGGCGAGGGGGAGGAA
AAGATCGCGGATGATGCACCCGCACCCGTGGGAGACAACCTGGCATGACG
CCGCCACCGTTGGCGTCCTGTCAACGTATGGCTGAGCACGGTACTACGCT
GAAGAACCGGTGCTTGGGA
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protein sequence of Ec-27_007010.1

>Ec-27_007010.1 ID=Ec-27_007010.1|Name=Ec-27_007010.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=367bp
MTDVEAQISADEALARRIQANEQQRESTPLISLTNRQPIMNVASINESNE
GNSGGGRIGLGELIQQAGSDEAETQPATRRPVNRATNRNVRMHIADDGVR
GMNASRLGLLLLTLVNLPLIAAGVVILTLHWQDTDVCDVEHRRKWKWWAL
LSVVRMMLITPVVMVRWRVEGQREEDRNQAIDHLSSNMRNSLDIVGLVWF
VIGHMWLLQNQGCDNPRDSPIYQLCLVYIIITYIHICLPCILLMLLVPVL
CFCLPCVIRLMGMLQGPQRRKGARQDEIEKLPVVKYREVQDMEDDACAIC
LVEYEAEDELRKLPCRHAFHKTCVDSWLAVNASCPNCRARCFEEEDGEGE
EKIADDAPAPVGDNLA*
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mRNA from alignment at chr_27:6403273..6412134-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-27_007010.1 ID=Ec-27_007010.1|Name=Ec-27_007010.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=8862bp|location=Sequence derived from alignment at chr_27:6403273..6412134- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
TGCTGCAAGGAGAGAGCTAGGGCCGAGGAGGGGTTGGGTTTGGGCAAATG
ACAGACGTGGAGGCTCAAATCTCCGCGGATGAAGCACTAGCAAGGAGGAT
TCAGGTGGTAATTCGTGCACTTGTTTTGACCTTGCAGCGGATAAACCACG
AACAGCTTCAGCAGGCAGCTGCGAGCTGCAGCACCAGGTTGTTGATGTGC
AACTTTAGTCGAGACCTTCCCTAGATTCGACATTTTCGTATGCCTCGCAT
GCCGTCCTCCCGCTGAAAGGACTGCCATGTTTGCGGATGGTTGTTCGCCG
TACCCCCGCAGTTGCACCTGCTGTATTGGCGCCCCTGCTTGGTTGCTTTC
GGGACGTTCCTGTGTAGAATACCATGTGTCGTATTTTTGGAGAGAGAGCT
GGCTGTCACTCGGTCTTGCACCAAACGCAACATTCAACCTCTTGCGCGTA
CATCGTAACCTCACCATTTGCCAACACGGCTCGTAACTCACAAGCCCCCG
CTGCTCCCCTACCCCGCCCGTCCACTGCTGCTGCGGTCTCCCCCACCTTG
GTCGTCTCCGCCTTTTTTGGGCCGGAAGGCGAACGAGCAGCAACGTGAGA
GCACCCCCCTCATCAGCCTCACCAACCGACAACCCATCATGAATGTTGCC
AGCATAAACGAGTCAAATGAAGGCAACAGCGGCGGCGGAAGAATTGGTTT
GGGAGAGCTGATCCAGCAGGCGGGGAGCGATGAGGCAGAGACGCAGCCGG
CGACTAGAAGGCCGGTTAACAGGGCTACCAACAGGAACGTCAGGCACGTG
GTGGTATTTGATTATTTTATTAAGGAATAATAAATCACACACAGAAAGAC
TAAAGGAAAAAAATTATTCACATGCAACAGGGTGCCACACACAAAACGCC
CGACTACCCAACAGTACCCAACACTGTTGCACCTTCCAACATAGCATATA
TGAGACACACAAGACAGCTATCAAACTGTTTTGTTGAGCCTGCTACCCGC
AGGGGAGATGTCCCTATATGCTGTCTGGGAAATCGGAGACATACAGGTAG
CTTTTTCTGATTCTAAAACGTTGCTAATCTGACTCTTTTCTATAGATGGA
GATGGATTCGTTGTGTCTTTGTATTAGGAACGATAAAAAAAGACTACCCA
TTCGAGATACACCCACAGTCGAACGGGATGTGGTGGAGTATCTTCAGTGA
GTGGAGGAAAACCGGCTGGGTACTGGACTTATTTCGAATCTTTTTAAGTC
TATACACTGATGATTTATATCAGTGATGCCAGCGGGTGCTGAGTACAAAG
ACATGTTTCCTTGGTGTGACTTTTTCTTTTCTTTTTTTGTCTTCACTTCA
AATCAGCGCTCACAGCACTATACTCCAACCCCTGGTCTTTTGTGCTTTTG
TGTGACTGCTGTGTAATAATAAGTGATGCTCGCAAAACGTCGCGCATCAC
TCCAACAGCTGCTGTACATGTACATACCTGTGGAAGCCGCCATTTTTTTC
CCCTGGGAGCAGTAGTACATTGTAGCAGCATATGCATAGCTCCCGATATA
AATAGCGCAGCAAGGTTCTCTTTTAGGGCGCGCTGGCGCGGCCCCGCGTT
TTTTTTTTTGAAGCATGGAAAAGCGCGCCCCCGGGCCGCGGCTTTCCGCG
CCTCAAAAAAATCCGCTGCCCTTTTGTTTCGCCGCAGGCGAATAAATTGG
CGCGGCATTTTCTTAGCGCAGGATATGGGCCCAGAGGTTTGACCGGCACT
ATTCCGGACACCGTCACTTTCAAAGTACAGAATTATTTGGTGGCACTATA
CCGCTCTCACTAAAAACAAAATGTGCTTCAATCACCGCAGAGTAGAATTT
ATTCTGCGTAACCCCGTCCCGGAGCTCTTGGGTTAGCTAGAGCTTATAAA
CGAACGTGATACCAGCAGATTACGAAAGACGTGCATACGTACCGGGGTGC
GACCGGACCCGAATAAAAAAAGAAACAATAGCAGAAAAACAGAAAAATAG
AAAAGTAGGACACAGGGCGATCAAGACAAACAAGGAGACCCCATCGCTCC
CGCTCGGCACGCGATGCCGAGCAAAACAAAATTGAGAATCAAACATCACC
AATTAAATAAAGGCAAAAAAATGCACACAAATTAGAGTCGCGACTGAAGT
TATCCCTGTAACCTCTAACCAGGCCGGGATGTGTTCGATTCGCCGCCGAC
GATACAGCTGTCAAGCCCTTCTTCCCCACACGTACACCAAACTAGATGCG
TGTAGGTGGTTCTGATGTCACTCCACCGGAACAACAGAAACAGATGCAGG
CACGCACAATGAACTGACTGACTGACACCATCTTGTCTTCTCTGGACCAA
TGGGACAATGAAAGAGGCGAGGGTTAGCGTTGGTGTTAGAGAGAGAAGTA
TGGCTGGTGTTCCTGCCAACTTCATCAACATTCAGCCAGGCACGTATCTC
TCCACACGTTCTGCCATCTCTGTCCTGTTCTCCTCAGCTGCAGTGGTGTC
CTCTATCCGAATATATCCAGCTGAATGTTTCGACGCTTCTTCCCCCCCCC
CCCCCCCAGATTGTCTGCCAACGTTAAGAAGAGTGCCGTCATGGTGTGCA
ACGAGGTCAGGGAGAAACCAGTAGAACTTAGATGGAAGTGGGGGATCGGC
GAGATTGCTGTAGTGGACCAGTACACATACCTCGGAGTAGAGATCGCAAA
CGACTGCTCGTGGAATGCACACATGTCCAAGGTAGCGGGAAAGGGCAAAG
CACGAGCAGAGAAGCTGCACCCAATACTCGCAAACCGGCACCTCGATACA
CGCATCAAATTGGCGGTTTTGAAGAGCGTCATCGTACCGCCGCTAGAGTA
CGCCGGAGAAGAATGGGAAGGAAATAAGAAGGTAGTGAAAGAATTCGAGG
CGGCGCAGATGAAAGCAGCGAAAATCATCCTAGGATGCTCCAAGCGCACA
AGTAATGCAGCCGCAAGGGCAGAATTGGGGATCCAATCCCTACGGTCGGG
AAGAGACGCAAGGAAGCTGACATGGCAGCATCGCATGTGCGGGATGGGAG
AGGAGAGGTTGCCGAGAATAGTATGGGAGGCGAAGTGGGCAAACAAAAAG
AGGGGTAGACAACCCACGGAATGGGTCAAGGTTGTAGAGGACGTATGGAA
GGGGTTCGAAATCGACGAAGATGAAACGCTAGAAACGGATGGTCTACAGG
AATGCAAAGAGAAGGTATCTGTTGCTTGTGCCGAGAGGAATAGAACATAA
TCTAAGGAAAGAAACCAAGGATATGGAGGGTCTAGAAGCGTACGGAATGT
TGAAACCTCTCCTCTTCGTACAACTGGCATTCCGCGACTACATGAACACG
GTCTTCGCATTCGAAGCCGCAATCACATTTGAACTTGTCGTCTTCGTCGT
CTACCATCCTATGTCTTCGTCGACGTTCTCGAAGGCCTATGTCCCCGGTC
CTGAATTTGACCTTAAGCTTTGTCCCTGCATCCTTTGGTCCATGACTGAG
CTGGGAAAAATACAAGGGACGTACAGGGAGAGGTTTGAGGCATGGAATAG
AGAGGAGAGGACGGTAGCTGTACTGGGGAGTAGGAAGGGGTTTGAAAAGG
CGGGAAGGGATATCGTTAGGATAGACAGACTAGGCAAGACAATTTTGAGC
CACCTTTGGCAAAGTAGGAAGGAGCGATTGGCCATCGGTGATCGGTCCTG
TGGGAACAATGGTCCGTCCTCTCGAGGACGCGTGGTCAATGGTCTAACCG
CTAAGGCATGCAAAACACAAGAGTATGCCCCCCCCCCCCCTGCTCGGTGG
TTGGTTCGATCTTCTGTCCGGCTCTAACAATGCTGTCCCGTTTCCGCGCA
CAGTCTGCTGGCTCAGAGTTACGAATACTGTGGAGTATGCCAATTGGAGG
GCACTACTTTGTAAATATATTGCATACTGTACGTAAATGAAGTAGGGCAA
CAACCAGATTATCAAGTTTTTTATGAGCAGGTGTTGGCCTGCATTTTCCC
GGTGGTGATATAACGGGCCCCACCACTACACCATGACTTAAGTGTAGTCT
ATGTATCAGAAGTCGCTGTGCGTGTAGGATGGGTGTGGGAGGACGACACC
CAACGCAGCAGCGGTGTGGTGATGCGTGGACACAGCGCTATTCCCAAAGT
ATCACCGACAGAATAAAAGTACATCGAATAGGTGTACGTTCCGGGTCGGA
ACCCGGCAGTTTCCCGTCCAATCAGCGTTATGAACCAGTGGCAGCAGTAC
AGGAGTCGATGCAGGTGCAAGCGGGCGGTTGCAGCGCGCTTCACGGCGCT
GTGAAATATCCCGGCTCCCGCTTGGGGTCTCGAGCCCGCGACAGACAGCG
GATGGAGGTCATTCGTGACGAAGAGAGAGAGAGAGAGAGAGAGTTGTACC
CGTCGGCAACGCGAAGAACAAGAGTCAGCCGATTGGGGTCCGCGTGCGGG
CGAGCCGCAATGGTCTTGAGCTCAGACTTGCCCGAAACGCCCCGCTGCTG
TGATGCGGGGCGCCCATAACTGAACCTTCAGATGGGCTCGAACTACTATT
TTGCAGTATTCCCCTCGTCTCTATCTCCCCCTTAACCGACTCGTTTTTTT
CCCGCCCTTTCCAAACCAACCGCCCTTCAGGATGCACATAGCCGACGATG
GCGTGCGTGGTATGAACGCTAGCAGGCTTGGCCTCCTCCTGCTCACCCTC
GTGAACCTCCCGCTGATTGCGGCTGGCGTGGTTATCCTAACCCTGCACTG
GCAAGACACGGACGTCTGCGACGTGGAACACAGACGGAAGTGGAAGTGGT
GGGCGCTGTTGTCGGTCGTGAGGATGATGCTCATTACCCCAGTGGTGATG
GTGAGTCTGTCTCAGTAGTGCCCAGCAGTGCATGCCAGATAGTAGAGCAG
AAGTGCCAGCATCGGTGGCTTGTGTAGTGCGTGCAAGATAGATCGCTACA
TTGACGAAATAGGCGTGTTGGTTCAGGCATCCGAGATCCGCAGATCATGT
TTCAAGGCTCTGCGTACCATTATTCAGTACCGCTGAGTGGAATCGCATCG
TAAAGTGTCTTGAGCTGTATATCGGTCTTGAGAGTGCTCCCGGGCTATCA
CATGAAAAATAACAAATGAAAAAATAGCGTACACCTATTTTTTCCTTTTT
TGTTGAAGGCTTGCAAGAGTGACTATACATACTGTAACAATACATCAACT
TGCAGTTTCCCTGCTGCTCCTCCTGTTTTGTGTTGTGGCTCCCTCGATAC
GAAGGTGAGATGGAGGGTGGAGGGTCAGAGAGAAGAAGACCGGAACCAGG
CGATCGACCACCTGTCTAGCAACATGCGGAATTCTCTGGACATTGTCGGG
CTCGTGTGGTTCGTAATCGGACACATGTGGTTGCTGCAAAATCAAGGGTG
AGTAGTCCATACCGTCAACACACGTGTGTCTCTCCCATGCAATGGCCTCG
ATGCAACGGGGATAGAACGATGTATAGATTACTTCCTCTGAAGCTGGTGT
TTCAAATAGTTCATCAGATCCCATTCGGTGAGCATTGCTGTACGCCATAC
CCCATGTTTGACTTTGGTGTAGGCAGTATCAGTTTATGACGCCGATGAGG
CACGCGGCTTTGCAGGTGTCCCAGTATATATCGACCCGGATGCAAAACCA
AAACAAATTAGCGCAAAGTAGGCACGAACAAGATGGGTCGAACAAGATGG
GTCGAACAAGATGGGTAGGGCTTCCGGTGACGATTGGTGCGGAAGCCAGG
GGTATCCTGTGTTCCGTCGCACATGATGCCGCTGCACGCCACAGATTCGC
TCGCAGCATTGTTCTCTCCATGCCTACTCTTCGCTGATTTGTATTGGTTT
TCCCGACATGCGTTGATAACCTAATTTGCGCCTTTATGCCGGTTTGTGCA
ATGTGACGTATGCATGCCCATAAGCAGGTTTAGTTTTGATCGTGGTGGTT
TAGTTGGGTCATGAGTGTCATGGGTGAAGTAGGGCGTACATCACTGAAAT
CGCTCGTGTGCATGGGCGATTGATTATCCAGCAATCGTGGGCCTCCTACT
GCTGTATTCACCAACAAAGTACTCGATTCAGCACCACCGATGTCATGGGG
GCTCTCTCTTTTTTTTGTTGGCGTTTTTCTGGGCTTCTCAAGGCGGATGC
TGGAACCTCTTGGATGTTGCTCACGTCCTCCCTCCCTCTGCGTTTGTCCA
TGTCTCATGGTTTCCCGCGGCGATGGCGATGGCGATGGTGGCGGCGGCGG
CGGCGGCGGCGGTGGTGCGCGCCAAGGTGTGACAACCCGAGGGACTCGCC
GATCTACCAGGTGACTTACTTGCTGATCTTCTAGATATGTAGCTTCATAG
GGGGACATATTTGTGGTATGTTCCGTCTGTCTTCGTCTAGTCCACCATTT
TTTTTTCCGGCGGTATCGAAGCGTGCAACGTACCGTGTAACGTACCGTGT
ACCGTACCGTCTACGACGCAAGAGAACACCTCCCGATGGTGACAGTTTTA
CTTGTTTATGACGGGGTCTGAAATATGGTGGGGGGTGCGGATGTCTTTTG
TCGTTTACGGCACATTAAGCCGTCATGTCGTTGTGTTCAGAGTAGACGAT
TCGTGCTTGCAGTTAGTTTTTGTGCCGCTGTTGCGGCGCCGCTGTTTTGG
CCAGATCGATCTCGTGTTGTTGGTGGCGTTACCCCAATTCCGTATTCCAT
TCCAACCGGGTACGGGCTTCCGTCGTAGAGGTATTATTTTACCTTGTTTC
AAGCAAGAAAAAAAGTTGTTCGATAAATTGTCGACGACACCCGCGAAATG
AAGGAGAATATGAATACATCCAACAAGTACGAGGCTTCTCTGCGATGTTG
TGCTTTCTCTCAACGCTGATGCCCATCACGACTCCGCCCCACGCCTCTCC
CTTGATCCCGCCGCTTCTTTGTTTGGCCTTTGCCGACCACGACAACGACA
ACGACAACGACAACGATAACGACGATGGCAACCGCAGCTGTGCCTGGTGT
ACATCATCATAACGTACATACACATCTGCCTGCCCTGCATCCTGCTGATG
CTGCTGGTGCCGGTGCTGTGCTTCTGCCTGCCGTGCGTGATCCGGTTGAT
GGGCATGCTGCAAGGACCGCAGAGACGGAAAGGGGCTAGGCAGGATGAAA
TCGAGAAGCTACCCGTTGGTGTGTGCGCCGTGTTTGTATGTGTGTGTATG
TGTGTGCGTGTGTATTTGTTACTTTAATCGACTGCCCTAACCGGCTGACC
AATGAAAACACGTCAGTGTCAGTGCGGTTGAAAACAGAGAATTGCTTCTC
AAGCCATGATCTGGGACCCCTCGTGTGTGTTTGTGTTTTTTTTTGTTTGA
CGACAGGCCGTTGAATGTTGGTTGATGTGTCGGCAAGTCTTGAGGTACAC
ACGCCACCAGAACCTAACCTGCACCATTCTGTGGCGGATAAGAGCTTTGG
TGGGGACATTCCCGGCGTTTCGTCTGCACGTGTCGATATAGTCGCAGGTT
CTTCCGTCTGTGTCTGTCTGTCTGTCTGTCTTATCTGTCTGTCTCTCTCA
ATGCTGTTAAGTTGAGCCCCCACAGGTACGCGGCGACACCCTTCCGTAGC
CGCTTCCAGCACGGTCAAGTTGTCCTCTCATCCTATCCTATCGTGTCATC
ATTCTGAGCCTCCACACCCACAATCGAAATCTACCTTCTAGCCCTTCATA
CTCGTTCTCGACCCTTGCAGGTGCCGATGTGATGTGCCCTGCCCTGCCCT
GCTCAATTGTTTTCTTTCTTGTCTTTGTTTTGTTCTTTCGTGTTTCGCCC
CCGACCCACCCCTGGAGCAGTCAAGTATCGTGAGGTGCAAGACATGGAAG
ACGACGCGTGCGCCATTTGTCTTGTGGAGTATGAAGCAGAGGACGAGCTC
AGAAAGCTTCCCTGCCGGCATGCCTTCCACAAAACGGTAAGCTGCCCCCC
ATTATTGCCTCCCAAGGACTTTAGCGAGCTACAGACCTTTATGATCTGTT
CTGGCAGTCGGCGGCACGGTTAGACGGCAGCAGTGCACGGTGTACTGGAG
TCAAGTTTTGAAGATGGAAAATTGGTCTTCTTTGTGCCTGCGTAGCGAGG
CATTCTATTGGGTCGTTTGAAATTTCTCTTGTGGGTTGCGGGACATTTAT
TTTGTCTTCGGAATGCCTCCTAGTTTAGGTGAAGCCTTAAGCCTTGTGTG
TCCGAGGCACGTGGCGTCTGAGGCATTCTCGTGTAGCGTTAGATACATTC
CTCTAGATCGTCTGCCGGGTGACCTTTCATGTTTTCCTTCTGTAACCAAT
ACATGTCCCGTTGGATGTACAAGGTGCGGTCCAATGTGTTTCCTTTGTTT
GCTCCTCAGGATCAAGAAAGGACTGCTGTGTTTTTCCCCGTATGATGACA
TACTCTACAGATTTTTGTATTCGGTTTCCCGACTTGCAAATCCCCCAGTG
CTTTTCCGGCATGAATCGTCGACTTCGAGCACGCTTTCCGTGCTTCGTCT
TTTCCTTCGCGACGATTCTTGTTCCACTGCGGGGTAGCTTATGCATACGT
TTTGTCCGAAATCTTCACCGGGACCCATGGGTCCACGTAGTCTTAGCATA
CTTTGTTCTAATACCCTCCATCCTTAACTCACCAACTCCGTGTGTAAATT
TGTCAGTGCGTGGACAGCTGGTTGGCCGTGAATGCGAGCTGTCCCAACTG
CAGGGCGCGCTGCTTCGAAGAAGAGGACGGCGAGGGGGAGGAAAAGATCG
CGGATGATGCACCCGCACCCGTGGGAGACAACCTGGCATGACGCCGCCAC
CGTTGGCGTCCTGTCAACGTATGGCTGAGCACGGTACTACGCTGAAGAAC
CGGTGCTTGGGA
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Coding sequence (CDS) from alignment at chr_27:6403273..6412134-

>Ec-27_007010.1 ID=Ec-27_007010.1|Name=Ec-27_007010.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1101bp|location=Sequence derived from alignment at chr_27:6403273..6412134- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGACAGACGTGGAGGCTCAAATCTCCGCGGATGAAGCACTAGCAAGGAG
GATTCAGGCGAACGAGCAGCAACGTGAGAGCACCCCCCTCATCAGCCTCA
CCAACCGACAACCCATCATGAATGTTGCCAGCATAAACGAGTCAAATGAA
GGCAACAGCGGCGGCGGAAGAATTGGTTTGGGAGAGCTGATCCAGCAGGC
GGGGAGCGATGAGGCAGAGACGCAGCCGGCGACTAGAAGGCCGGTTAACA
GGGCTACCAACAGGAACGTCAGGATGCACATAGCCGACGATGGCGTGCGT
GGTATGAACGCTAGCAGGCTTGGCCTCCTCCTGCTCACCCTCGTGAACCT
CCCGCTGATTGCGGCTGGCGTGGTTATCCTAACCCTGCACTGGCAAGACA
CGGACGTCTGCGACGTGGAACACAGACGGAAGTGGAAGTGGTGGGCGCTG
TTGTCGGTCGTGAGGATGATGCTCATTACCCCAGTGGTGATGGTGAGATG
GAGGGTGGAGGGTCAGAGAGAAGAAGACCGGAACCAGGCGATCGACCACC
TGTCTAGCAACATGCGGAATTCTCTGGACATTGTCGGGCTCGTGTGGTTC
GTAATCGGACACATGTGGTTGCTGCAAAATCAAGGGTGTGACAACCCGAG
GGACTCGCCGATCTACCAGCTGTGCCTGGTGTACATCATCATAACGTACA
TACACATCTGCCTGCCCTGCATCCTGCTGATGCTGCTGGTGCCGGTGCTG
TGCTTCTGCCTGCCGTGCGTGATCCGGTTGATGGGCATGCTGCAAGGACC
GCAGAGACGGAAAGGGGCTAGGCAGGATGAAATCGAGAAGCTACCCGTTG
TCAAGTATCGTGAGGTGCAAGACATGGAAGACGACGCGTGCGCCATTTGT
CTTGTGGAGTATGAAGCAGAGGACGAGCTCAGAAAGCTTCCCTGCCGGCA
TGCCTTCCACAAAACGTGCGTGGACAGCTGGTTGGCCGTGAATGCGAGCT
GTCCCAACTGCAGGGCGCGCTGCTTCGAAGAAGAGGACGGCGAGGGGGAG
GAAAAGATCGCGGATGATGCACCCGCACCCGTGGGAGACAACCTGGCATG
A
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Synonyms
The feature 'Ec-27_007010.1' has the following synonyms
Synonym
Esi0339_0029
Esi_0339_0029