Ec-27_006860.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-27_006860.1
Unique NameEc-27_006860.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length471
Homology
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BLAST of Ec-27_006860.1 vs. uniprot
Match: D7FSY5_ECTSI (Threonine--tRNA ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSY5_ECTSI)

HSP 1 Score: 934 bits (2415), Expect = 0.000e+0
Identity = 470/470 (100.00%), Postives = 470/470 (100.00%), Query Frame = 3 
Query:   12 MARFPQQRGLVSALAVGLAMTTRVASFRAYSSVRSLSSYRRPAARPTNGRPLDGGSRAPDRWVNSRAGQRPRMSTAAAPAAXXXXXAVEVVEKEELPTNEGSPELLKIRHTSAHVMAMAVQRLFPGTQVTIGPWIDNGFYYDFYNEETTMTDSDLKKIKKEMDKIIRQKLPLVREEVTREEARSRIEALGEPFKLEILDSIKTEPITLYHVGDQWWDLCAGPHVETTGDLPQKGIELQTLAGAYWRGDENRPALQRIYGTAWENPAQLKEHKRRMVEAKRRDHRVLGKKLDLFSLQEDAGGGLVFWHPKGSTIRMLIENFWKAQHLDKGYELLYTPHVANLDLWKTSGHFDFYKDGMFDQMDVEGDQYQIKPMNCPFHCLVYKDDLRSYRELPIRWAEMGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLEDEIISVLDLTEAILSRFGFDRRVWVGGVVFKVTRR 1421
            MARFPQQRGLVSALAVGLAMTTRVASFRAYSSVRSLSSYRRPAARPTNGRPLDGGSRAPDRWVNSRAGQRPRMSTAAAPAAXXXXXAVEVVEKEELPTNEGSPELLKIRHTSAHVMAMAVQRLFPGTQVTIGPWIDNGFYYDFYNEETTMTDSDLKKIKKEMDKIIRQKLPLVREEVTREEARSRIEALGEPFKLEILDSIKTEPITLYHVGDQWWDLCAGPHVETTGDLPQKGIELQTLAGAYWRGDENRPALQRIYGTAWENPAQLKEHKRRMVEAKRRDHRVLGKKLDLFSLQEDAGGGLVFWHPKGSTIRMLIENFWKAQHLDKGYELLYTPHVANLDLWKTSGHFDFYKDGMFDQMDVEGDQYQIKPMNCPFHCLVYKDDLRSYRELPIRWAEMGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLEDEIISVLDLTEAILSRFGFDRRVWVGGVVFKVTRR
Sbjct:    1 MARFPQQRGLVSALAVGLAMTTRVASFRAYSSVRSLSSYRRPAARPTNGRPLDGGSRAPDRWVNSRAGQRPRMSTAAAPAAXXXXXAVEVVEKEELPTNEGSPELLKIRHTSAHVMAMAVQRLFPGTQVTIGPWIDNGFYYDFYNEETTMTDSDLKKIKKEMDKIIRQKLPLVREEVTREEARSRIEALGEPFKLEILDSIKTEPITLYHVGDQWWDLCAGPHVETTGDLPQKGIELQTLAGAYWRGDENRPALQRIYGTAWENPAQLKEHKRRMVEAKRRDHRVLGKKLDLFSLQEDAGGGLVFWHPKGSTIRMLIENFWKAQHLDKGYELLYTPHVANLDLWKTSGHFDFYKDGMFDQMDVEGDQYQIKPMNCPFHCLVYKDDLRSYRELPIRWAEMGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLEDEIISVLDLTEAILSRFGFDRRVWVGGVVFKVTRR 470
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BLAST of Ec-27_006860.1 vs. uniprot
Match: A0A6H5JBI8_9PHAE (Threonine--tRNA ligase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBI8_9PHAE)

HSP 1 Score: 872 bits (2253), Expect = 5.460e-315
Identity = 436/459 (94.99%), Postives = 443/459 (96.51%), Query Frame = 3 
Query:   12 MARFPQQRGLVSALAVGLAMTTRVASFRAYSSVRSLSSYRRPAARPTNGRPLDGGSRAPDRWVNSRAGQRPRMSTAAAPAAXXXXXAVEVVEKEELPTNEGSPELLKIRHTSAHVMAMAVQRLFPGTQVTIGPWIDNGFYYDFYNEETTMTDSDLKKIKKEMDKIIRQKLPLVREEVTREEARSRIEALGEPFKLEILDSIKTEPITLYHVGDQWWDLCAGPHVETTGDLPQKGIELQTLAGAYWRGDENRPALQRIYGTAWENPAQLKEHKRRMVEAKRRDHRVLGKKLDLFSLQEDAGGGLVFWHPKGSTIRMLIENFWKAQHLDKGYELLYTPHVANLDLWKTSGHFDFYKDGMFDQMDVEGDQYQIKPMNCPFHCLVYKDDLRSYRELPIRWAEMGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLEDEIISVLDLTEAILSRFGFDRRVW 1388
            MARFPQQRGLVSALAVGLAM TRVASFRAYSSVRSLSSYRRPA  PTN RPLDG  RAP RWV+SRAG+RPRMSTAAAPAA     AVEVVEKEELPTNE SPELLKIRHTSAHVMAMAVQRLFPGTQVTIGPWIDNGFYYDF+NEETTMTDSDLK+IKKEMDKIIRQKLPLVREEVTREEAR RIEALGEPFKLEILDSIKTEPITLYHVGDQWWDLCAGPHV+TTGDLPQKGIELQTLAGAYWRGDENRPALQRIYGTAWENPAQLKEHKRRMVEAKRRDHRVLGKKLDLFSLQEDAGGGLVFWHPKGSTIRMLIENFWKAQHL+ GYELLYTPHVANLDLWKTSGHFDFYKDGMFDQMDVEGDQYQIKPMNCPFHCLVYKDDLRSYR LPIRWAEMGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLEDEIISVLDLTEAILSRFGFDRRV+
Sbjct:    1 MARFPQQRGLVSALAVGLAMATRVASFRAYSSVRSLSSYRRPATHPTNRRPLDGERRAPHRWVDSRAGRRPRMSTAAAPAAAPAA-AVEVVEKEELPTNESSPELLKIRHTSAHVMAMAVQRLFPGTQVTIGPWIDNGFYYDFFNEETTMTDSDLKEIKKEMDKIIRQKLPLVREEVTREEARRRIEALGEPFKLEILDSIKTEPITLYHVGDQWWDLCAGPHVDTTGDLPQKGIELQTLAGAYWRGDENRPALQRIYGTAWENPAQLKEHKRRMVEAKRRDHRVLGKKLDLFSLQEDAGGGLVFWHPKGSTIRMLIENFWKAQHLENGYELLYTPHVANLDLWKTSGHFDFYKDGMFDQMDVEGDQYQIKPMNCPFHCLVYKDDLRSYRHLPIRWAEMGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLEDEIISVLDLTEAILSRFGFDRRVY 458
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BLAST of Ec-27_006860.1 vs. uniprot
Match: A0A835ZFX3_9STRA (Threonine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFX3_9STRA)

HSP 1 Score: 632 bits (1631), Expect = 8.140e-221
Identity = 304/394 (77.16%), Postives = 347/394 (88.07%), Query Frame = 3 
Query:  192 RWVNSRAGQRPRMSTAAAPAAXXXXXAVEVVEKEELPTNEGSPELLKIRHTSAHVMAMAVQRLFPGTQVTIGPWIDNGFYYDFYNEETTMTDSDLKKIKKEMDKIIRQKLPLVREEVTREEARSRIEALGEPFKLEILDSIKTEPITLYHVGDQWWDLCAGPHVETTGDLPQKGIELQTLAGAYWRGDENRPALQRIYGTAWENPAQLKEHKRRMVEAKRRDHRVLGKKLDLFSLQEDAGGGLVFWHPKGSTIRMLIENFWKAQHLDKGYELLYTPHVANLDLWKTSGHFDFYKDGMFDQMDVEGDQYQIKPMNCPFHCLVYKDDLRSYRELPIRWAEMGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLEDEIISVLDLTEAILSRFGF 1373
            RWV+S   QR  M++AAAPA        E V   ELPTN+ S  LLKIRHT+AHVMAMAVQ+LFP TQVTIGPWID+GFYYDF+N +   ++ DLK IKKEMD+II+ KLPL REEV+REEAR RIEA+GE FKLEILDSIKTEPIT+YH+G++WWDLCAGPHVETTGDLP K I+LQ +AGAYWRGDE R  LQRIYGTAWE+P QLKEHKR M EAKRRDHRVLGKKLDL+SLQE+AGGGLVFWHPKG+ IR LIE++WK+ HL++GYELLYTPHVANL+LWKTSGHFDFY++GMFDQMDVEG+Q+QIKPMNCPFHCLVYKD +RSYR+LPIRWAE+GTVYRYERSGTLHGLMRVRGFTQDDAH+FCLP+QLE EII++LDL E +LSRFGF
Sbjct:   64 RWVSS---QRLSMNSAAAPAI------AEEVVPIELPTNKNSENLLKIRHTTAHVMAMAVQKLFPETQVTIGPWIDSGFYYDFFNADKQFSEDDLKAIKKEMDRIIKSKLPLRREEVSREEARRRIEAIGEKFKLEILDSIKTEPITIYHIGEEWWDLCAGPHVETTGDLPPKAIQLQNVAGAYWRGDEKREMLQRIYGTAWESPEQLKEHKRLMEEAKRRDHRVLGKKLDLYSLQEEAGGGLVFWHPKGAIIRRLIEDYWKSVHLEEGYELLYTPHVANLNLWKTSGHFDFYREGMFDQMDVEGEQFQIKPMNCPFHCLVYKDAMRSYRDLPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHVFCLPDQLETEIIAILDLFERVLSRFGF 448
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BLAST of Ec-27_006860.1 vs. uniprot
Match: A0A7S2V1W5_9STRA (Threonine--tRNA ligase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1W5_9STRA)

HSP 1 Score: 620 bits (1599), Expect = 3.980e-216
Identity = 294/363 (80.99%), Postives = 324/363 (89.26%), Query Frame = 3 
Query:  294 ELPTNEGSPELLKIRHTSAHVMAMAVQRLFPGTQVTIGPWIDNGFYYDFYNEET-TMTDSDLKKIKKEMDKIIRQKLPLVREEVTREEARSRIEALGEPFKLEILDSIKTEPITLYHVGDQWWDLCAGPHVETTGDLPQKGIELQTLAGAYWRGDENRPALQRIYGTAWENPAQLKEHKRRMVEAKRRDHRVLGKKLDLFSLQEDAGGGLVFWHPKGSTIRMLIENFWKAQHLDKGYELLYTPHVANLDLWKTSGHFDFYKDGMFDQMDVEGDQYQIKPMNCPFHCLVYKDDLRSYRELPIRWAEMGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLEDEIISVLDLTEAILSRFGFDR 1379
            ELPTNE +  LLKIRHT+AHVMAMAVQ+LFP  QVTIGPWIDNGFYYDFY+ +    TD DLKKIKK+MDKII+  LPL REEV+REEA+ RIEALGEPFKLEILDSIKTEPITLYHVG++WWDLCAGPHVE+TG LP K I+L ++AGAYWRGDE R  LQRIYGTAWE+P QLK +K  +VEAK+RDHRVLGKKLDLFSLQE+AGGGLVFWHP+GS IR +IE+FWK  H   GYELLYTPHVANLDLWKTSGHFDFY+DGMFDQMDVEGD+YQI+PMNCPFHCLVYKD LRSYRELPIRWAE+GTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLEDEI+ V DL E ILS+FGF +
Sbjct:   77 ELPTNENNENLLKIRHTTAHVMAMAVQKLFPNVQVTIGPWIDNGFYYDFYHTDGGAFTDEDLKKIKKQMDKIIKADLPLRREEVSREEAKKRIEALGEPFKLEILDSIKTEPITLYHVGEEWWDLCAGPHVESTGKLPPKAIQLDSVAGAYWRGDEKREVLQRIYGTAWEDPPQLKAYKSMLVEAKKRDHRVLGKKLDLFSLQEEAGGGLVFWHPRGSLIRRMIEDFWKNAHEGGGYELLYTPHVANLDLWKTSGHFDFYRDGMFDQMDVEGDEYQIRPMNCPFHCLVYKDSLRSYRELPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLEDEIVGVCDLVETILSKFGFSK 439
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BLAST of Ec-27_006860.1 vs. uniprot
Match: A0A7S2SSP0_9STRA (Threonine--tRNA ligase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSP0_9STRA)

HSP 1 Score: 618 bits (1593), Expect = 2.300e-215
Identity = 290/361 (80.33%), Postives = 329/361 (91.14%), Query Frame = 3 
Query:  297 LPTNEGSPELLKIRHTSAHVMAMAVQRLFPGTQVTIGPWIDNGFYYDFYN-EETTMTDSDLKKIKKEMDKIIRQKLPLVREEVTREEARSRIEALGEPFKLEILDSIKTEPITLYHVGDQWWDLCAGPHVETTGDLPQKGIELQTLAGAYWRGDENRPALQRIYGTAWENPAQLKEHKRRMVEAKRRDHRVLGKKLDLFSLQEDAGGGLVFWHPKGSTIRMLIENFWKAQHLDKGYELLYTPHVANLDLWKTSGHFDFYKDGMFDQMDVEGDQYQIKPMNCPFHCLVYKDDLRSYRELPIRWAEMGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLEDEIISVLDLTEAILSRFGFD 1376
            LPTNE S  LL+IRHTSAHVMAMAVQRLFP  QVTIGPWIDNGFYYDF N +E   T+SDLK IKKEMD+II++KLPL+REEV+R+EAR+RIEAL EPFKLEILDSI+TEPIT+YH+GD+WWDLCAGPHVE TG+LP KGI+LQ++AGAYWRGDE+R  L RIYGTAWE+ AQL ++K  + EAK+RDHRVLGKKLDLFS+Q++AGGGLVFWHPKGST+R +IE+FWK  HL  GYELLYTPHVANL+LWKTSGHFDFY++GMFDQMDVEGD+YQIKPMNCPFHCLVYKD LRSYR+LPIRWAE+GTVYRYERSGTLHGLMRVRGFTQDDAHIFCLP QL DEI+ VLDLTE ILS+FGF+
Sbjct:   60 LPTNEDSERLLRIRHTSAHVMAMAVQRLFPEVQVTIGPWIDNGFYYDFKNPDEGGFTESDLKAIKKEMDRIIKKKLPLIREEVSRDEARTRIEALNEPFKLEILDSIETEPITIYHIGDEWWDLCAGPHVEHTGELPPKGIQLQSMAGAYWRGDESRDMLTRIYGTAWEDAAQLSQYKAMLEEAKKRDHRVLGKKLDLFSIQDEAGGGLVFWHPKGSTVRRVIEDFWKDTHLASGYELLYTPHVANLELWKTSGHFDFYREGMFDQMDVEGDEYQIKPMNCPFHCLVYKDSLRSYRDLPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPNQLSDEIVGVLDLTEQILSKFGFN 420
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BLAST of Ec-27_006860.1 vs. uniprot
Match: A0A7S0D919_9EUKA (Threonine--tRNA ligase n=2 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0D919_9EUKA)

HSP 1 Score: 600 bits (1548), Expect = 1.060e-209
Identity = 280/340 (82.35%), Postives = 307/340 (90.29%), Query Frame = 3 
Query:  357 MAMAVQRLFPGTQVTIGPWIDNGFYYDFYNEETTMTDSDLKKIKKEMDKIIRQKLPLVREEVTREEARSRIEALGEPFKLEILDSIKTEPITLYHVGDQWWDLCAGPHVETTGDLPQKGIELQTLAGAYWRGDENRPALQRIYGTAWENPAQLKEHKRRMVEAKRRDHRVLGKKLDLFSLQEDAGGGLVFWHPKGSTIRMLIENFWKAQHLDKGYELLYTPHVANLDLWKTSGHFDFYKDGMFDQMDVEGDQYQIKPMNCPFHCLVYKDDLRSYRELPIRWAEMGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLEDEIISVLDLTEAILSRFGFD 1376
            MAMAVQRL+PG QVTIGPW+DNGFYYDFYN E    + DLKKIKKEM+KII+  LPL REEV+REEA+ RIEA+ EP+KLEILD+IKTEPIT+YH+GD+WWDLCAGPHVETTG LP+  IELQT+AGAYWRGDE R  LQRIYGTAWEN +QLK +K  + EAKRRDHRVLG KLDLFS+QEDAGGGLVFWHPKGSTIR LIE+FWK  H+  GYELLYTPHVANLDLWKTSGHFDFY++GMFDQMDVEGD YQIKPMNCPFHCLVYKD LRSYRELPIRWAE+GTVYRYERSGTLHGLMRVRGFTQDDAHIFCLP QLEDE++ VLDLTE+ILSRFGFD
Sbjct:    1 MAMAVQRLYPGVQVTIGPWVDNGFYYDFYNPENPFQEEDLKKIKKEMEKIIKSDLPLRREEVSREEAKRRIEAINEPYKLEILDAIKTEPITIYHIGDEWWDLCAGPHVETTGKLPKNAIELQTIAGAYWRGDEKREMLQRIYGTAWENKSQLKAYKDLLAEAKRRDHRVLGTKLDLFSIQEDAGGGLVFWHPKGSTIRKLIEDFWKDLHIQNGYELLYTPHVANLDLWKTSGHFDFYQEGMFDQMDVEGDMYQIKPMNCPFHCLVYKDKLRSYRELPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPNQLEDELVGVLDLTESILSRFGFD 340
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BLAST of Ec-27_006860.1 vs. uniprot
Match: A0A7S1VGN3_9STRA (Threonine--tRNA ligase n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VGN3_9STRA)

HSP 1 Score: 605 bits (1559), Expect = 1.680e-209
Identity = 278/373 (74.53%), Postives = 330/373 (88.47%), Query Frame = 3 
Query:  297 LPTNEGSPELLKIRHTSAHVMAMAVQRLFPGTQVTIGPWIDNGFYYDFYNEETT------------MTDSDLKKIKKEMDKIIRQKLPLVREEVTREEARSRIEALGEPFKLEILDSIKTEPITLYHVGDQWWDLCAGPHVETTGDLPQKGIELQTLAGAYWRGDENRPALQRIYGTAWENPAQLKEHKRRMVEAKRRDHRVLGKKLDLFSLQEDAGGGLVFWHPKGSTIRMLIENFWKAQHLDKGYELLYTPHVANLDLWKTSGHFDFYKDGMFDQMDVEGDQYQIKPMNCPFHCLVYKDDLRSYRELPIRWAEMGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLEDEIISVLDLTEAILSRFGFDR 1379
            LPTN+   ELL IRH+SAHVMAMAVQ+++P  QVTIGPWIDNGFYYDFY  ETT            +TD DLKK+KK MDKI+ +  P+ REEVTREEARSRIEALGEPFKLEILDSIKTEPIT+YH+G++WWDLCAGPHVE+TG +P+K ++LQ++AGAYWRGDE R  LQRIY TAW++P QLK++K+ + EAK+RDHR+LG+KL+LFS+QEDAGGGLVFWHPKGST+R ++E+FWK +HLD GY+L+YTPH+AN+DLWKTSGHFDFYK+ MFDQM VE DQYQIKPMNCPFHCL+YKD+LRSYR+LPIRWAE+GTVYRYERSGTLHGLMRVRGFTQDDAHI+CLP QL++EI++VLDLTE ILSRFGFD+
Sbjct:   93 LPTNDNDNELLCIRHSSAHVMAMAVQQVYPEAQVTIGPWIDNGFYYDFYFPETTSEETGETIPGRKLTDQDLKKVKKAMDKIVTKNYPITREEVTREEARSRIEALGEPFKLEILDSIKTEPITIYHIGEEWWDLCAGPHVESTGKIPKKALQLQSVAGAYWRGDEKREMLQRIYATAWKDPDQLKQYKKLLQEAKKRDHRMLGQKLNLFSIQEDAGGGLVFWHPKGSTVRRIVEDFWKQKHLDGGYDLVYTPHIANIDLWKTSGHFDFYKEDMFDQMQVENDQYQIKPMNCPFHCLMYKDELRSYRDLPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIYCLPSQLQEEIVAVLDLTEGILSRFGFDQ 465
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BLAST of Ec-27_006860.1 vs. uniprot
Match: W7TW93_9STRA (Threonine--tRNA ligase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TW93_9STRA)

HSP 1 Score: 596 bits (1537), Expect = 1.870e-208
Identity = 274/359 (76.32%), Postives = 321/359 (89.42%), Query Frame = 3 
Query:  297 LPTNEGSPELLKIRHTSAHVMAMAVQRLFPGTQVTIGPWIDNGFYYDFYNEETTMTDSDLKKIKKEMDKIIRQKLPLVREEVTREEARSRIEALGEPFKLEILDSIKTEPITLYHVGDQWWDLCAGPHVETTGDLPQKGIELQTLAGAYWRGDENRPALQRIYGTAWENPAQLKEHKRRMVEAKRRDHRVLGKKLDLFSLQEDAGGGLVFWHPKGSTIRMLIENFWKAQHLDKGYELLYTPHVANLDLWKTSGHFDFYKDGMFDQMDVEGDQYQIKPMNCPFHCLVYKDDLRSYRELPIRWAEMGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLEDEIISVLDLTEAILSRFGF 1373
            LP+N+ SP LL+IRHTSAHVMAMAVQRLFP  QVTIGPWI+NGFYYDF   +T  T+ DL KIKKEM++II+++LPL REEVTREEAR RIEA+ EP+KLEILD IKTEPIT+YH+GD+WWDLCAGPHVE+TGDLP   I+L++LAGAYWRGDE R  L RIYGTAWE+  QLKE++R M EAK+RDHRVLG++LDLFS+QEDAGGGLVFWHPKG+T+R ++E+FWK +H  +GY+LLYTPH+ANL LWKTSGHFDFYK+GMFDQM+VE + +QI+PMNCPFHCL++KD LRSYRELPIRWAE+GTVYRYERSGTLHGLMRVRGFTQDDAHIFCLP QL+DEI  VLDL E+ILS+FGF
Sbjct:  125 LPSNDQSPNLLRIRHTSAHVMAMAVQRLFPSVQVTIGPWIENGFYYDFDTGDTKFTEEDLNKIKKEMERIIKKRLPLRREEVTREEARKRIEAMQEPYKLEILDGIKTEPITIYHIGDEWWDLCAGPHVESTGDLPSNAIKLESLAGAYWRGDEKRAMLTRIYGTAWESKEQLKEYQRLMEEAKKRDHRVLGRRLDLFSIQEDAGGGLVFWHPKGATVRKIVEDFWKDEHERRGYQLLYTPHMANLQLWKTSGHFDFYKEGMFDQMEVENEAFQIRPMNCPFHCLIFKDTLRSYRELPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPSQLQDEIRGVLDLVESILSKFGF 483
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BLAST of Ec-27_006860.1 vs. uniprot
Match: B5Y5F7_PHATC (Threonine--tRNA ligase n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B5Y5F7_PHATC)

HSP 1 Score: 595 bits (1534), Expect = 5.120e-206
Identity = 277/381 (72.70%), Postives = 328/381 (86.09%), Query Frame = 3 
Query:  273 VEVVEKEELPTNEGSPELLKIRHTSAHVMAMAVQRLFPGTQVTIGPWIDNGFYYDFYNEETT------------MTDSDLKKIKKEMDKIIRQKLPLVREEVTREEARSRIEALGEPFKLEILDSIKTEPITLYHVGDQWWDLCAGPHVETTGDLPQKGIELQTLAGAYWRGDENRPALQRIYGTAWENPAQLKEHKRRMVEAKRRDHRVLGKKLDLFSLQEDAGGGLVFWHPKGSTIRMLIENFWKAQHLDKGYELLYTPHVANLDLWKTSGHFDFYKDGMFDQMDVEGDQYQIKPMNCPFHCLVYKDDLRSYRELPIRWAEMGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLEDEIISVLDLTEAILSRFGFDR 1379
            VE  E  ELPTN+   ELL+IRH+SAHVMAMAVQR+FP  QVTIGPWID+GFYYDF+  E T            +++ DLK +KK MDKII +  P+ RE+V+REEAR RIE +GEPFKLEILDSIKTEPITLYH+GD+WWDLCAGPHV++TG LP+K I+LQ++AGAYWRGDENR  LQRIY TAW++P QLK++K+ + EAK+RDHR+LGKKLDLFS+QEDAGGGLVFWHPKGS +R +IE+FWK  H+  GY+++Y+PH+AN+DLWKTSGHFDFY+  MFDQMDVE +QYQIKPMNCPFHCL+YKD+LRSYR+LP RWAE+GTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQL+DEI+ VLDLTE ILSRFGFD+
Sbjct:   65 VEEEELVELPTNDNDEELLRIRHSSAHVMAMAVQRIFPEAQVTIGPWIDSGFYYDFFFPERTDEESGETIPARKLSEQDLKDVKKAMDKIIGKDYPISREDVSREEARRRIEKIGEPFKLEILDSIKTEPITLYHIGDEWWDLCAGPHVDSTGKLPKKAIQLQSVAGAYWRGDENREMLQRIYATAWKDPQQLKQYKKMLEEAKKRDHRMLGKKLDLFSIQEDAGGGLVFWHPKGSKVRRMIEDFWKDAHIQDGYDVVYSPHIANIDLWKTSGHFDFYRADMFDQMDVENEQYQIKPMNCPFHCLMYKDELRSYRDLPFRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLQDEIVGVLDLTETILSRFGFDK 445
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BLAST of Ec-27_006860.1 vs. uniprot
Match: A0A4D9D5P2_9STRA (Threonine--tRNA ligase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D5P2_9STRA)

HSP 1 Score: 594 bits (1532), Expect = 4.660e-205
Identity = 274/359 (76.32%), Postives = 320/359 (89.14%), Query Frame = 3 
Query:  297 LPTNEGSPELLKIRHTSAHVMAMAVQRLFPGTQVTIGPWIDNGFYYDFYNEETTMTDSDLKKIKKEMDKIIRQKLPLVREEVTREEARSRIEALGEPFKLEILDSIKTEPITLYHVGDQWWDLCAGPHVETTGDLPQKGIELQTLAGAYWRGDENRPALQRIYGTAWENPAQLKEHKRRMVEAKRRDHRVLGKKLDLFSLQEDAGGGLVFWHPKGSTIRMLIENFWKAQHLDKGYELLYTPHVANLDLWKTSGHFDFYKDGMFDQMDVEGDQYQIKPMNCPFHCLVYKDDLRSYRELPIRWAEMGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLEDEIISVLDLTEAILSRFGF 1373
            LP+N+ SP LL+IRHTSAHVMAMAVQRLFP  QVTIGPWI+NGFYYDF   +T  T+ DL KIKKEM++II+++LPL REEVTREEAR RIEA+ EP+KLEILD IKTEPIT+YH+GD+WWDLCAGPHVE+TGDLP   I+L++LAGAYWRGDE R  L RIYGTAWE+  QLKE++R M EAK+RDHRVLG+KLDLFS+QEDAGGGLVFWHPKG+T+R ++E+FWK +H  + Y+LLYTPH+ANL LWKTSGHFDFYK+GMFDQM+VE + +QI+PMNCPFHCL++KD LRSYRELPIRWAE+GTVYRYERSGTLHGLMRVRGFTQDDAHIFCLP QL+DEI  VLDL E+ILS+FGF
Sbjct:  125 LPSNDQSPNLLRIRHTSAHVMAMAVQRLFPSVQVTIGPWIENGFYYDFDTGDTKFTEEDLSKIKKEMERIIKKRLPLRREEVTREEARKRIEAMQEPYKLEILDGIKTEPITIYHIGDEWWDLCAGPHVESTGDLPSNAIKLESLAGAYWRGDEKRAMLTRIYGTAWESKEQLKEYQRLMEEAKKRDHRVLGRKLDLFSIQEDAGGGLVFWHPKGATVRKIVEDFWKDEHERREYQLLYTPHMANLQLWKTSGHFDFYKEGMFDQMEVENEAFQIRPMNCPFHCLIFKDTLRSYRELPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPSQLQDEIRGVLDLVESILSKFGF 483
The following BLAST results are available for this feature:
BLAST of Ec-27_006860.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSY5_ECTSI0.000e+0100.00Threonine--tRNA ligase n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5JBI8_9PHAE5.460e-31594.99Threonine--tRNA ligase n=1 Tax=Ectocarpus sp. CCAP... [more]
A0A835ZFX3_9STRA8.140e-22177.16Threonine--tRNA ligase n=1 Tax=Tribonema minus Tax... [more]
A0A7S2V1W5_9STRA3.980e-21680.99Threonine--tRNA ligase n=1 Tax=Fibrocapsa japonica... [more]
A0A7S2SSP0_9STRA2.300e-21580.33Threonine--tRNA ligase n=1 Tax=Rhizochromulina mar... [more]
A0A7S0D919_9EUKA1.060e-20982.35Threonine--tRNA ligase n=2 Tax=Amorphochlora amoeb... [more]
A0A7S1VGN3_9STRA1.680e-20974.53Threonine--tRNA ligase n=1 Tax=Grammatophora ocean... [more]
W7TW93_9STRA1.870e-20876.32Threonine--tRNA ligase n=1 Tax=Nannochloropsis gad... [more]
B5Y5F7_PHATC5.120e-20672.70Threonine--tRNA ligase n=1 Tax=Phaeodactylum trico... [more]
A0A4D9D5P2_9STRA4.660e-20576.32Threonine--tRNA ligase n=1 Tax=Nannochloropsis sal... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_27contigchr_27:6264877..6274830 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score944.9
Seed ortholog evalue1.4e-272
Seed eggNOG ortholog2880.D7FSY5
Length1425
KEGG rclassRC00055,RC00523
KEGG koko:K01868
KEGG ReactionR03663
KEGG Pathwayko00970,map00970
KEGG ModuleM00359,M00360
Hectar predicted targeting categorysignal peptide
Gene idEc-27_006860.1
GOsGO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0007275,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009790,GO:0009791,GO:0009793,GO:0009987,GO:0010154,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0022414,GO:0032501,GO:0032502,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0048316,GO:0048608,GO:0048731,GO:0048856,GO:0061458,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.threonyl-tRNA aminoacylation
EggNOG OGsCOG0441@1,KOG1637@2759
EC6.1.1.3
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-27_006860Ec-27_006860Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_27 6264877..6274830 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_006860.1Ec-27_006860.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_27 6264889..6274830 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_006860.1.1Ec-27_006860.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 6264877..6264971 +
Ec-27_006860.1.2Ec-27_006860.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 6266045..6266374 +
Ec-27_006860.1.3Ec-27_006860.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 6266821..6266943 +
Ec-27_006860.1.4Ec-27_006860.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 6270259..6270404 +
Ec-27_006860.1.5Ec-27_006860.1.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 6271039..6271163 +
Ec-27_006860.1.6Ec-27_006860.1.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 6272198..6272299 +
Ec-27_006860.1.7Ec-27_006860.1.7Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 6272569..6272645 +
Ec-27_006860.1.8Ec-27_006860.1.8Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 6273394..6273576 +
Ec-27_006860.1.9Ec-27_006860.1.9Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 6274587..6274830 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_0068605UTR:Ec-27_006860.1Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_27 6264877..6264888 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_006860.1CDS:Ec-27_006860.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_27 6264889..6264971 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-27_006860.1 ID=Ec-27_006860.1|Name=Ec-27_006860.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=471bp
MARFPQQRGLVSALAVGLAMTTRVASFRAYSSVRSLSSYRRPAARPTNGR
PLDGGSRAPDRWVNSRAGQRPRMSTAAAPAAAAPAVAVEVVEKEELPTNE
GSPELLKIRHTSAHVMAMAVQRLFPGTQVTIGPWIDNGFYYDFYNEETTM
TDSDLKKIKKEMDKIIRQKLPLVREEVTREEARSRIEALGEPFKLEILDS
IKTEPITLYHVGDQWWDLCAGPHVETTGDLPQKGIELQTLAGAYWRGDEN
RPALQRIYGTAWENPAQLKEHKRRMVEAKRRDHRVLGKKLDLFSLQEDAG
GGLVFWHPKGSTIRMLIENFWKAQHLDKGYELLYTPHVANLDLWKTSGHF
DFYKDGMFDQMDVEGDQYQIKPMNCPFHCLVYKDDLRSYRELPIRWAEMG
TVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLEDEIISVLDLTEAILS
RFGFDRRVWVGGVVFKVTRR*
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spliced messenger RNA

>Ec-27_006860.1 ID=Ec-27_006860.1|Name=Ec-27_006860.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1425bp|location=Sequence derived from alignment at chr_27:6264877..6274830+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
CCGTTGCTGCCAATGGCGCGATTCCCGCAGCAGAGAGGACTCGTCTCGGC
CCTTGCGGTGGGCCTTGCGATGACCACGAGGGTGGCTTCTTTCAGGGCAT
ACTCTTCTGTCCGATCTCTCTCCTCCTACCGACGACCAGCGGCTCGCCCC
ACCAACGGCCGTCCACTCGATGGGGGAAGCAGAGCACCCGACCGGTGGGT
CAACTCTAGAGCCGGGCAGCGGCCGCGCATGAGCACCGCCGCCGCGCCGG
CCGCCGCCGCGCCTGCTGTTGCGGTAGAGGTGGTGGAGAAGGAGGAGCTA
CCGACAAACGAGGGTTCGCCGGAGCTGTTGAAGATCCGGCATACATCGGC
GCACGTGATGGCCATGGCGGTGCAGCGGCTGTTTCCGGGGACGCAGGTTA
CGATCGGACCCTGGATCGACAACGGGTTTTACTACGACTTCTATAACGAG
GAGACGACGATGACAGACTCTGACCTGAAGAAGATCAAGAAGGAGATGGA
CAAGATCATCAGACAGAAGCTCCCGCTCGTGAGAGAGGAAGTCACCAGGG
AAGAGGCAAGAAGTCGCATTGAGGCCTTGGGGGAACCCTTCAAGCTTGAG
ATTCTGGACTCGATCAAGACGGAGCCCATCACGCTTTACCACGTGGGAGA
CCAGTGGTGGGATCTGTGCGCCGGCCCCCACGTTGAAACAACTGGCGACC
TTCCCCAGAAGGGCATCGAGCTGCAGACGTTGGCCGGTGCCTACTGGCGC
GGAGATGAGAACAGGCCGGCGCTACAGCGTATCTACGGCACCGCGTGGGA
AAACCCTGCCCAGCTCAAGGAACACAAGCGGCGTATGGTGGAGGCCAAGC
GGCGAGATCACCGCGTTCTGGGCAAGAAGCTCGACCTTTTTTCGCTACAG
GAAGACGCCGGCGGTGGCCTGGTGTTTTGGCATCCGAAGGGGTCGACTAT
CCGAATGCTGATCGAGAACTTCTGGAAGGCCCAGCACCTCGATAAAGGTT
ACGAGCTGCTCTACACTCCGCACGTAGCCAACCTCGACCTGTGGAAGACT
TCCGGGCACTTCGACTTCTACAAGGACGGGATGTTCGACCAGATGGATGT
GGAGGGAGACCAGTATCAGATCAAGCCCATGAACTGCCCCTTCCACTGCC
TCGTGTACAAGGACGACCTTCGCTCTTACAGAGAGCTTCCGATCCGTTGG
GCCGAGATGGGCACGGTGTACCGTTACGAACGAAGCGGCACTCTCCACGG
GCTGATGCGAGTGCGAGGCTTCACCCAGGACGACGCCCACATCTTCTGCC
TACCGGAGCAGCTGGAGGACGAGATCATCTCCGTGCTCGACCTGACAGAG
GCGATCTTGAGCCGATTTGGTTTCGACAGGCGAGTGTGGGTTGGCGGTGT
GGTGTTCAAGGTGACCAGGCGATAA
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protein sequence of Ec-27_006860.1

>Ec-27_006860.1 ID=Ec-27_006860.1|Name=Ec-27_006860.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=471bp
MARFPQQRGLVSALAVGLAMTTRVASFRAYSSVRSLSSYRRPAARPTNGR
PLDGGSRAPDRWVNSRAGQRPRMSTAAAPAAAAPAVAVEVVEKEELPTNE
GSPELLKIRHTSAHVMAMAVQRLFPGTQVTIGPWIDNGFYYDFYNEETTM
TDSDLKKIKKEMDKIIRQKLPLVREEVTREEARSRIEALGEPFKLEILDS
IKTEPITLYHVGDQWWDLCAGPHVETTGDLPQKGIELQTLAGAYWRGDEN
RPALQRIYGTAWENPAQLKEHKRRMVEAKRRDHRVLGKKLDLFSLQEDAG
GGLVFWHPKGSTIRMLIENFWKAQHLDKGYELLYTPHVANLDLWKTSGHF
DFYKDGMFDQMDVEGDQYQIKPMNCPFHCLVYKDDLRSYRELPIRWAEMG
TVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLEDEIISVLDLTEAILS
RFGFDRRVWVGGVVFKVTRR*
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mRNA from alignment at chr_27:6264877..6274830+

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-27_006860.1 ID=Ec-27_006860.1|Name=Ec-27_006860.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=9954bp|location=Sequence derived from alignment at chr_27:6264877..6274830+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
CCGTTGCTGCCAATGGCGCGATTCCCGCAGCAGAGAGGACTCGTCTCGGC
CCTTGCGGTGGGCCTTGCGATGACCACGAGGGTGGCTTCTTTCAGGTGAA
TTGTGAATACAGCAGTTGGTTCAGAACGTACGTGAGGCCCTCTCTGTCAT
CGCATCTCATTGACTGTTACTTTGTACACGCTGACAACATACAAACCAAC
ACTGCCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTAATGCTT
CACTTAGGCGTCGTTCGTGCGGCACGGCCTGACAATCATGGGGCGTTGCT
TACTGTGGGAATAGTTTAAACTGTCAGTCACCCTTGTGGGTTGTCGGTGG
AGTTGTGGTGTCACCGGCATGCAACGGCAGCGTCATGTTGTTCAACACAG
CGGTGTCATATCTAGACCGCTGTCTGAGCACGGACACTATAGTGGAGGTG
TACACACACGACAACAGCGTTCTCGTCGGCCGCTCGTTTGTGATGTGCAT
TACGCCTCCATCATGTGTACCACTGCTGTGTTCCGGACAGCGCAGTACAT
TGACATGCATAGCTGCGTTAATTCTGTACTGCAACCCCGTTCGCTGGCAT
GCCTGAGTAGCACCATCGGCGGAACTGCGGTACAGCACCACACACCAGCA
GTCACGTGTTAGCGCTCTCTTAGACCCGCAGGTGCTTGTGTGTGTGCCTT
TCGAGCTTCAACCGCAGATCAGACCCAGACGAGCACCCTGTAAACCAGTG
AATGGTTATTCGATACTTCGGCGGCTCCCTGCTGCAGTCGTGTTGACAAC
CTGTGTCGTGTGGCAAGACCGTCAAGTCTGCAGCCGTCGGACAAGCGAAA
CATGCAAGCAGTATGCAGCCTCACGGCTTTGTCTATAACTACCCCCTTTA
TCCTGAACCAATTACATTCCCTTCTCGACGAAATCCGCACATGAGACGTG
TAGACAGCTGTGGCATCAGTTAGTCCACCGCCGATCCTCAAGCACGTGTC
CTCTCTCGTCCCGCCCCCCCCCCANNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCCCCCGCCCTCC
CTCGTACACCCAACACAGGGCATACTCTTCTGTCCGATCTCTCTCCTCCT
ACCGACGACCAGCGGCTCGCCCCACCAACGGCCGTCCACTCGATGGGGGA
AGCAGAGCACCCGACCGGTGGGTCAACTCTAGAGCCGGGCAGCGGCCGCG
CATGAGCACCGCCGCCGCGCCGGCCGCCGCCGCGCCTGCTGTTGCGGTAG
AGGTGGTGGAGAAGGAGGAGCTACCGACAAACGAGGGTTCGCCGGAGCTG
TTGAAGATCCGGCATACATCGGCGCACGTGATGGCCATGGCGGTGCAGCG
GCTGTTTCCGGGGACGCAGGTTACGATCGGACCCTGGATCGACAACGGGT
GAGAGATACTGCTGTAGATATATACGAGAGCGCGCGGGGGGCACAGCAGT
AATCATGTAAACGCATGCCGTAGTCGTTAGGCGATTGGCCTCGCATCCCT
ACAAGGCCGGGACGGAGCGATATGTGTCTTGCCCAGCCTACGTTTCACAA
GGATGACCCAGAAGCTGATATAAATAGTGTCATCATACTTGCGTTTGCTG
TGCCAATATGAGCGTGGTCATGAACGGCCGTGCGCCATATAAAAAGGTGT
CCGTGTTAATGGCATTGATTGGTTTTAGGGGGGTCATGAACGGCTCTACA
TACTAAAGGTTTCCTTGTGAAAGGCCTCAATTGGTTTTTGATGCAGACGC
TCACGATGAGTCGATTTGTCAACGTGACGTTCAGCAATCAGTCGGTATAT
CCTGGTGGCATCGTGTTCCGATACGTTGTTTGCTTTGGCAACAGGTTTTA
CTACGACTTCTATAACGAGGAGACGACGATGACAGACTCTGACCTGAAGA
AGATCAAGAAGGAGATGGACAAGATCATCAGACAGAAGCTCCCGCTCGTG
AGAGAGGAAGTCACCAGGCAAGCCCAACGCTACACTTGTACCCGGTCACA
CATGCTGATTTATTCGTGGACCGACCAATCAAGTTATTTTCGCAAGCAGT
TTAAGCACGCGCTTCTGTGGGTAGCGATTTAAAATAGATTGCCCGTCAGC
GAAGGAGAGGATAGCGACATCGAACGAATCACACGTGTTTGAGGTGCTCT
GCCGCCCTCAGCGGCTGGTGTCGAGACTGGGTACTATGTTATCCCAGGAA
AAGCAGATGGAGAAAAGGACCACGTATTATTTTCCGACACGCAAGCCCCT
CAGGCAAGTGAGCTCGTGGGCTCTTTCTCTCTCTCTCACCGGGGGTCTTC
TCCTACCCCCCATATGATTCATACCCATCCACGTAACCCCCATCAGGCGC
ATACAGCGCATGTAGACCGGACACACATCCAAAGTACCACAAAAAGCCCC
CCTACTTGATATGCGTACGATCTTCCAGCCAATGCAAAAACGCAAATAAC
CACTTGAGAAACATCCTCTACAAGAACTGACCAGGCATGTAACACAAAGC
GTCTCCATCAGCTAATTCAAGAATCCAATACATTCGCCCGTGGACATAAT
CTCAAACCGTCGACACAAAAGAATCACCCTCGGAAAAGTACCCAACAATT
ATTTGTGCTACATCAGAAAAGCGTTGGAACGAAAACAACCATTTTCTGGA
AAACAGCTTCAAAAGAGTTGAATACCAAATCTTCAAACGAAACAAGAACT
CAACTTCTTGACCAATCAAAACGAGAATTCGGAAAGCACAATGGCTCCAG
CCGTTAGTCGTCAAAACACGTCAAACCCGTCATCCAGTATAGTGTCCAAG
GACCAATCCTTAAACAGCGCGCACCCCCAAATCGGTGCCATCGCTGTTGT
CCAAGAAACGGTAGAAAACAAAGCAAAAAACATCCATGCAAACAGCCCCC
CTGCTGTGACATCCCAAGAAACTATCATCCCAACTTTATATCTTTACGCC
AACAGCCCCCCTGTGGGGACATGTCCAAAAACATACTTCGTAGGAAAAAA
CAACAAGATATCAATTGCTGTTCATGCACTCTAAATCATGGTCACATATG
ACATCCCTCCCCACGGTTGCAGATACATACACAGCAAGAAGACACTACAA
CCTCTGCTGCAAAAAAACAGAAACAATGCCGAAATAACAAACGCAAAAAC
CTTACATCAAATAGCAAAAAAAAAAACGCAAACGACCAACAAGGAAACGT
TACTTGATGTTCATCACAACATCACGGCGATGGTGGCGCCGCGGCCGCGG
CGGCGGCGGGAACGGCAGCAGCGGCAGCAGCAGCGATAAAACACCCTCTT
TCCCGTCGGCTTGATGCCCATCTGTCGCGCCGTCTCGCGAATAAGGGCGT
CATGCGCATGGCCGAGAATGGTGTTGTGACAATGGTGGTTGTTGTGCGTG
TCGGCGACATTTTCTCGATCGGGACAAAGAGTAGGTGTGATCAGTTTGGC
AGAGACTTGAACGCCTACCATGACCACAGCGACCGCACATGGGCACGGCG
CACATCGATCCCGGGGGGATGGGGGACTCCGGCTGCGGCCACGCTGCGTT
CCGCCCGGGGTCTGTGGCGCCCCCCGGAACAAAACCCATCGCCATCGGAG
GAGTGGTCTACTGCTGCTGCTGCTGCTGCGGGAAAGAATTGGGGGAGGCG
GAGGGAAAATGCTGAGGGTGTCGCCGTTGATACTGCTGCTGCGGCGCCTG
CTGCTGGAACGACGGCTGCGACTGCTGCTGCTGCTGCTGGCGATAGCCCC
CCTGGTACTCTCCCAGGGATCCTCCTCCCCACCCTGGCTGCTGCTGCCCA
TCTCTACCTCGCTGTGTACCTTGGGAAAAAACTCCGGTCCTCCGCTGCGG
ACCGCCGCCGCCGCCGCTGCCGTTGGGCCGTGAATTTCCGCCGAAACGAA
GAGCGTGCGGGTCGCCGGCGGCGCTGCCGTCCGCCGCACAACATTTTCGA
GGTCGTGCTTAAGGTGGCGGCTACGCACAAGAGTCTCCAAGTCCGTGCGT
GTGAGCGAGCGATCAGACATGAACAGCCGCTTGAGCTGGTCGTAATCGGC
CGAGAGGTTCCTACGAAGAAGCGCAAGGACCTCTCTGTCTGTGATGTCAT
CGCCGTTGACGGCGCGGATTATAGACAGCACGTTGTCAAACCTAAGAAAG
TAATCCCTTTGTTCCTCTCCGAGCTGCATCTTCATGTTGGTGAGAGACAG
CTTCAGAGCCTCCTTCTCGGAGTCAGTCATCGGGAGGCAGAACTGTTGGG
CAGCCTCCCACGCCCCAGACACAAGTCCCAACTTACAGGATTTTAGCCTG
AAATTTTGGCCCCCTTCGTGGCGCACATTAGGTTCTCAAAAGCACACTCA
TGTTCACGCACGCGCCGCTCACCGTGAAAGCGGATGTTTTCGCTACTTGA
CGTGTGGATGCGCCAGATGCGTTGATGAGGACTCGACGGCTCCGCAAGTA
TGTGCGCAAGAAAATTTCGCGAGGGAGGAAGATCTCGAACAGCGTCTTGA
ACAGCGGGAAGTTGCCGTCGTACACCGGTGGCTTCCGGTCCTTCCGCTGC
ATTCCATTCGATCATTCTGAATCTGAACAGTAGTAGCCGCTCCCCCGGCT
CCAAAAGTAGCCGCCCCCCCGGCGGCTCCATCCCTGTTATAGTACCCGGG
CGCATAACCCGCGCCGTCCATCCTCATGTTGCCTGCCGTATACCCGGCAT
CACCCACTCTTCCTCTCGCGGCTTCCTCCGCTGAGCTCCTATCTTCTTCT
TCATGGACTCTCCTCTGTGACTCCTCGTTCTTCAATCTTTCTTCTGACTC
CTTCTTTTCTTTGCGTCATCGCCGAACCAACACCTGGCCTAGCTAGGCTC
TCGACGATCGATCGTGTTCGAGGTGCTCTGCCGCCCTCAGCGGTCTGTGG
TGTCGAGACTGGGTACTATGTTATCCCAGGAACAGCAGATAAAAAAGTAC
GATGTATTATTTTCCGACACGCAGGCCCCTCAGGCAAGTGAGCTCGTGGG
CTCTTTCTCTCTCTCGCACCAGGGGTCTTCTCCTACCCCCCATATGCTTC
ACACCCATCCACGTAACCCCCATCAAACGCATACAGCGCATGTAGATCGG
ACAAACATCCAAAGTACCACAAACAATACGTACTCGTTTCGGGAAAGCAT
CGTGTTGAGAGAGCTTTCCTACCGCCTACATACCCCCCGCGAAGTGTCAA
CCGTTAGTTGACGTTATGTGTCCGGTCCATGGACGGTGCCGTGGCTGGTA
CATCTCGCTCTTGCTGTTGCTCCACGTTATAGGGAAGAGGCAAGAAGTCG
CATTGAGGCCTTGGGGGAACCCTTCAAGCTTGAGATTCTGGACTCGATCA
AGACGGAGCCCATCACGCTTTACCACGTGGGAGACCAGTGGTGGGATCTG
TGCGCCGGCCCCCACGTTGAAACAACTGGTGAGCCTTGCCCTTGGCCTTA
GCCTTGATGCCGGCGTCGTGTCATGTTGCGGGCGTACCCACTTTAGGACC
AGAGCATGTGTGTGTAGGTCTTGAATTCCCGGAAACCACGAAGAGCAATG
TATGGAAGCGTCATGACCGGAACTGGCTTGGCCATCCTGTTGAAGGCGTT
CGATGTACCATGCCGTGGGCAGCTCTTGAGCTATTGATCGCTCATCTGCC
CCTTTGATGGGCCCACCCATCTCCAGCAAGCCTTTGTGAGCGTTTTGATG
CCTATGCGACTCTAGTAGTCTACCAAGCGCGAGCGCCGTAAAGGTGCCGG
CGAACGGACAGGTGTGCGATGATCCGGTCATTTTTTTTTTTAAGGCTCAA
TTGCTCCACAACCTACACGGAAAGAGGGTCGACGAGACCATTCGAAAACC
ACCCTCCTTGTTTTGTTGCATCAAACGAGCTGTACTGTAACAATCGATTG
CCCACCTGTCCGTTCGCCCGCACCTTTGCGGCATGTTTAGGATAGCTGCC
TATCCGACCTCGCCCGACACGCCGCCATCACGAGACAACAAACACAAACT
GTACATTGTAACAAAAAACACGCCGACGGCAATGACAATGACGACAACAC
GATGTGTGCCAGGCGACCTTCCCCAGAAGGGCATCGAGCTGCAGACGTTG
GCCGGTGCCTACTGGCGCGGAGATGAGAACAGGCCGGCGCTACAGCGTAT
CTACGGCACCGCGTGGGAAAACCCTGCCCAGCTCAAGGTATCTAGGTAGC
TACAATATTTAGCATGTCCCAAGAGGTGGTTTCGTTGTTGCGGTTCGTTG
TTTCGTTTCGACTTGGCTAGTCGTTTCGCGTGTGGGTGTGCTGATGACCG
ATGGCTTGTTTCCATCGATGATTAGGTTGGCTCCACCGGTGTCGCCACCA
GAATTGTGTTTGACGCCCTACGCCCCGGTATTACATGGGTTTTTGAATGC
GACACTCATGCGACACTAAGGCCTGTTGAACAGAACGGGTTGCCTGTTTT
GTGCCGGTATGCGCCCAGAAAGTTAACCGGCAATATACTGGACGGGCACT
ATTCAAAGCACTGACAACGGCTTGGAAATTCAGTGTGTGCCCACCGAAAA
CACCGGCACCGCTGTACCGGACATTGGCACTATTCAACCGGCACTACACA
GGGACCCCCACCGTGGTCGAAAAATGAAAAATGCATCCCGAGGGTACATC
GGACTCTTGGCATGTTGGGTCCCACGCACCGCCCTGATTAATGAGTTGCC
TCTGGCGGTGATCGTTGTTGGACAGTGACAGTGGCAGTGTGGTGGTTGAC
GCCAATGTTGCGTCGGCCGGACACGGGGCCTCATCTGTTGGTTGTGTATG
GTGCGTGGTGGTGTTGCCTCACTCTTCACTACAATAATAGCTCCTTTGTT
CCACACCTTGTTTCAATGGCCCGCCCGAGGGACAGTGGCGGTGTTGGGGG
CATGTCGGGCAAAAGAACACGCGTTGACGTCGCGTTTGCCGCCTTGTTTT
TTCTTGGGGGCATTGGCGTCGGAAGCTGGATACCGTGGCACACCCTCCAC
ACTCACGCTGAACTGTAGCTCGAGTGAGCTGGCGCGGCCAGCTTCTCCAC
TATCTTCTCACACGTCCGATCACATCACTCAACAAAAGGAACACCCGCCC
TCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCGTGCTACCTGCTGCGTA
ACCTACCCTGCCCTCCCGGGCTCGGGTCTATGACGCATGTTGCCGTGGGG
TCGATGACGTCGGTGAAACAGGAACACAAGCGGCGTATGGTGGAGGCCAA
GCGGCGAGATCACCGCGTTCTGGGCAAGAAGCTCGACCTTTTTTCGCTAC
AGGAAGACGCCGGCGGTGGCCTGGTAGGATGAAGAACAAACTCAAGCCTG
TTTGCTCGATCTCATATCATCTTCCTCAGTTTTGTGGTCGGCGCTGTACC
TGGCGGCATGAGTGTGGGATTCTTCTCTCGTAGATGTCGTAGATCTCGTA
GATTGGTGGTGAGCGCTTGGATTGGCGTGGACATAAACAGGTCTGCTTCC
CGCGCAACATCGCGCGAGCTTGTCGATTTTATGCGTGCGAACCGAAGGTG
TTCCACTTGTAACGTACTGCTGTCACTTTCCTTGTGTTTCAGGTGTTTTG
GCATCCGAAGGGGTCGACTATCCGAATGCTGATCGAGAACTTCTGGAAGG
CCCAGCACCTCGATAAAGGGTGAGCGAGGAACAACGCGCGAGCGAGAGAC
TAAGATTTTCTTCCGACTCTGCGTTCAGGACGTAGAACTTGATTACATGA
CTCCTTTTTCGGGGGGGGGGGGGGGGGGGGCACACAAGAATATATATTTG
TGTGTTTGATCTGGGCCGTGGGGGTGGCATGTGCCACCGATGGATTCCCT
CTCTGCTAGTTTGAAGACCATCCCCATGTTTCCTGCGCTACAGTCATGAT
GGTCGTTGTGATTGTTGTTGTGGTCGCTTCGCTGCTGCTGCTGTGTTTGT
TTGCCTTGCGAAAAGAGGCGTCGCCGTAAGTGTCAGCGTCAGTCAGCTTT
GGCGGTTTCACCTTTTGCATCCATTCGATGTGGGCATGACATCGGCATCA
TCGACATGCCCCACCACACCACCACCGAACACTTACCGTCTTGACCTCGC
CCACACGGACTGATCCTTTGCTCTACCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTTTCTCTGTGCTCTCTCTCTCTCTCTCTCTCTGTCTG
TCTGTCTGTCTGTCTCTTTCTCTATTTCTCTATTTTTCTATTTCTCTCTT
TCTTTCTCTCTCTCTCCCTCTCTCTCTTTCTGTCTCTTCTCTCTCTGTGT
CTCTCTCTGTCTATCTGTCTCTCTCTTTCTCTCTTTCTCTATTTTTCTAT
TTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGT
TTTTCTGTTTTTATTAGTTACGAGCTGCTCTACACTCCGCACGTAGCCAA
CCTCGACCTGTGGAAGACTTCCGGGCACTTCGACTTCTACAAGGACGGGA
TGTTCGACCAGATGGATGTGGAGGGAGACCAGTATCAGATCAAGCCCATG
AACTGCCCCTTCCACTGCCTCGTGTACAAGGACGACCTTCGCTCTTACAG
GCGTGTATCCTTACCCTTAGCGTACTTGCCATCTTGCTTTCTCGATCTAG
AAAGTGTCGTTGTTGGTGTTGGTGTTGCTGTTTGTGGTGTGGTGCATGCA
GCGTGCTTTAGACTACCGTGAGGATGCGAGATAACGCACGGGGGTGCGAT
CTATTTTTTAATTATTTCGTTCATGACATTGATCGCACCCCATTTGGCGC
ACCCCCGTGCGATATCACTGGTACGTGCGATATCACCGGTGCCCGTGCGA
TGATCGAAATATATTGTTTGGTTCTTGGTTTTTCATCGCACGGGTGTGCA
ATATCACCATTACGTGCGGTACTGAGTAAACAATAAACCCTACAGCAGCT
ACCGTGGGTGCTTTCGACGCAATAGCGTGAAGTGATGAATGACAGTCTCC
CTGACTCCTTGTTTTTTGTCATATTTTCATACTTTCCAAGTGTTTCAATA
TGTGGTACGCGATGCCGCCATACGTACAGCACAACACCGTTCACGATACC
GCGAAGTACCTCCTGCGCAGCGAGTGCCCCTGAGCCACTCGAGGCTCGGT
GTCGGTGATACCGATCACCGAACCCTGTGCGATAATCGAAGTAAATCACT
TGCTTATTGTTTTTTTGTCGCACGGGGGTGCGATATCACCAGTATGTGCG
ATATCACTGAACCCCGTGCGATAATCAAATTAAATCACTTGCTTCTTGGT
TTTTTATCACACGGGGGTGTGATTTTATGGCACGGGGTTGCGATATCTCC
GGTATGTGCCATATCACAGAGCCGTGCGTTCTCTCGCGTCCTTACCGTAC
ACGAAACCCAGTGTGTCTCTCCCTGACAGAGTCTTTCTATCCGCGATGTA
CCCCCATGACCCTCCGTGACAAACAGAGATCTTAAACGATTCGATGGACA
ATCATGACACTAACCACGCAAACAGAAATCTATCTGATCGATCCGATGGG
CAATCATGACCCTCCCTAACAAACAGATATTTCCCATCCGCGACCCCCCT
CTCATGACAGAGAGCTTCCGATCCGTTGGGCCGAGATGGGCACGGTGTAC
CGTTACGAACGAAGCGGCACTCTCCACGGGCTGATGCGAGTGCGAGGCTT
CACCCAGGACGACGCCCACATCTTCTGCCTACCGGAGCAGCTGGAGGACG
AGATCATCTCCGTGCTCGACCTGACAGAGGCGATCTTGAGCCGATTTGGT
TTCGACAGGCGAGTGTGGGTTGGCGGTGTGGTGTTCAAGGTGACCAGGCG
ATAA
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Coding sequence (CDS) from alignment at chr_27:6264877..6274830+

>Ec-27_006860.1 ID=Ec-27_006860.1|Name=Ec-27_006860.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1413bp|location=Sequence derived from alignment at chr_27:6264877..6274830+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGCGCGATTCCCGCAGCAGAGAGGACTCGTCTCGGCCCTTGCGGTGGG
CCTTGCGATGACCACGAGGGTGGCTTCTTTCAGGGCATACTCTTCTGTCC
GATCTCTCTCCTCCTACCGACGACCAGCGGCTCGCCCCACCAACGGCCGT
CCACTCGATGGGGGAAGCAGAGCACCCGACCGGTGGGTCAACTCTAGAGC
CGGGCAGCGGCCGCGCATGAGCACCGCCGCCGCGCCGGCCGCCGCCGCGC
CTGCTGTTGCGGTAGAGGTGGTGGAGAAGGAGGAGCTACCGACAAACGAG
GGTTCGCCGGAGCTGTTGAAGATCCGGCATACATCGGCGCACGTGATGGC
CATGGCGGTGCAGCGGCTGTTTCCGGGGACGCAGGTTACGATCGGACCCT
GGATCGACAACGGGTTTTACTACGACTTCTATAACGAGGAGACGACGATG
ACAGACTCTGACCTGAAGAAGATCAAGAAGGAGATGGACAAGATCATCAG
ACAGAAGCTCCCGCTCGTGAGAGAGGAAGTCACCAGGGAAGAGGCAAGAA
GTCGCATTGAGGCCTTGGGGGAACCCTTCAAGCTTGAGATTCTGGACTCG
ATCAAGACGGAGCCCATCACGCTTTACCACGTGGGAGACCAGTGGTGGGA
TCTGTGCGCCGGCCCCCACGTTGAAACAACTGGCGACCTTCCCCAGAAGG
GCATCGAGCTGCAGACGTTGGCCGGTGCCTACTGGCGCGGAGATGAGAAC
AGGCCGGCGCTACAGCGTATCTACGGCACCGCGTGGGAAAACCCTGCCCA
GCTCAAGGAACACAAGCGGCGTATGGTGGAGGCCAAGCGGCGAGATCACC
GCGTTCTGGGCAAGAAGCTCGACCTTTTTTCGCTACAGGAAGACGCCGGC
GGTGGCCTGGTGTTTTGGCATCCGAAGGGGTCGACTATCCGAATGCTGAT
CGAGAACTTCTGGAAGGCCCAGCACCTCGATAAAGGTTACGAGCTGCTCT
ACACTCCGCACGTAGCCAACCTCGACCTGTGGAAGACTTCCGGGCACTTC
GACTTCTACAAGGACGGGATGTTCGACCAGATGGATGTGGAGGGAGACCA
GTATCAGATCAAGCCCATGAACTGCCCCTTCCACTGCCTCGTGTACAAGG
ACGACCTTCGCTCTTACAGAGAGCTTCCGATCCGTTGGGCCGAGATGGGC
ACGGTGTACCGTTACGAACGAAGCGGCACTCTCCACGGGCTGATGCGAGT
GCGAGGCTTCACCCAGGACGACGCCCACATCTTCTGCCTACCGGAGCAGC
TGGAGGACGAGATCATCTCCGTGCTCGACCTGACAGAGGCGATCTTGAGC
CGATTTGGTTTCGACAGGCGAGTGTGGGTTGGCGGTGTGGTGTTCAAGGT
GACCAGGCGATAA
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Synonyms
The feature 'Ec-27_006860.1' has the following synonyms
Synonym
Esi0241_0046
Esi_0241_0046