Ec-27_006800.2 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Ec-27_006800.2
Unique Name	Ec-27_006800.2
Type	mRNA
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	356

Homology

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BLAST of Ec-27_006800.2 vs. uniprot
Match: A0A6H5KS82_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS82_9PHAE)

HSP 1 Score: 605 bits (1560), Expect = 5.840e-205
Identity = 316/379 (83.38%), Postives = 327/379 (86.28%), Query Frame = 1

Query:  808 LDRARRAVWGMLYADDAGVVSRSAEGLTRMMTITVEVFEEFGLTVSEK-TETLLMRAKDKSTXXXXXXXXSPLTIEAAGQKYAQTTEFRYLGGLVNEHGDLTREISYRSRGAWACLRRYGQELFDRPKAPFRLKIRLLLAEAMEALLYGCMTWSPLSGHYQTLRSTHHRLLLRVIGYKRKKDTYRQLSYAQTLKRVECQSVEATIRQRRLLFAGALARQPDGRLPKRLMLGELAGGEKPRRGGQEQNWPKCVLDDLKAFGADHGSTKTDPCCLGIPVPKDTAPKLRWTEAAKVEGGVPWHAVVLQGAERFMTSWHEKEEEASRQRALKRNHKPTTNGAGG---GQETDETAREESKREETDRVARYVPD*FLLANPPPP 1932
            LDR RRAVWGM YADDAGVVSRSAEGL RMMTI VEVF EFGLTVSEK TETLLMRAKDK T         PLTI+AAGQKYAQTTEFRYLGGLVNEHGDLTREI+YRSRGAWACLRRYG+ELFDRP+AP RLKIRLL AEAMEALLYGCMTWSPLS HYQTLRS HHRLLLRVIGYKRKKDTYRQLSYAQTLKR ECQSVEATIRQRRLLFAGALARQPDGRLPKRLM GELAGGEK RRGGQEQNWPKCVLDDL AFGADHGSTKTDPCCLGIP  KDTAPKL+WTEAAKVEGGVPWHA VLQGAERFMTSWHEKEEEASRQRALKRNHKP T G GG   G   D   R++++R+      R   + F L  PPPP
Sbjct:  343 LDRVRRAVWGMSYADDAGVVSRSAEGLARMMTIIVEVFGEFGLTVSEKKTETLLMRAKDKPTTISQTAPPPPLTIKAAGQKYAQTTEFRYLGGLVNEHGDLTREINYRSRGAWACLRRYGRELFDRPQAPSRLKIRLLQAEAMEALLYGCMTWSPLSRHYQTLRSIHHRLLLRVIGYKRKKDTYRQLSYAQTLKRFECQSVEATIRQRRLLFAGALARQPDGRLPKRLMFGELAGGEKRRRGGQEQNWPKCVLDDLNAFGADHGSTKTDPCCLGIPETKDTAPKLQWTEAAKVEGGVPWHAAVLQGAERFMTSWHEKEEEASRQRALKRNHKPPTQGWGGMGAGDGRDGEGRKQTRRDGPSGAIRAELN-FFLPIPPPP 720

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BLAST of Ec-27_006800.2 vs. uniprot
Match: A0A6H5L417_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L417_9PHAE)

HSP 1 Score: 585 bits (1509), Expect = 3.360e-201
Identity = 302/342 (88.30%), Postives = 311/342 (90.94%), Query Frame = 1

Query:  880 EGLTRMMTITVEVFEEFGLTVSE-KTETLLMRAKDKSTXXXXXXXXSPLTIEAAGQKYAQTTEFRYLGGLVNEHGDLTREISYRSRGAWACLRRYGQELFDRPKAPFRLKIRLLLAEAMEALLYGCMTWSPLSGHYQTLRSTHHRLLLRVIGYKRKKDTYRQLSYAQTLKRVECQSVEATIRQRRLLFAGALARQPDGRLPKRLMLGELAGGEKPRRGGQEQNWPKCVLDDLKAFGADHGSTKTDPCCLGIPVPKDTAPKLRWTEAAKVEGGVPWHAVVLQGAERFMTSWHEKEEEASRQRALKRNHKPTTNGAGGGQETDETAREESKREETDRVARYVPD 1902
            EGL RMMTI VEVF EFGLTVSE KTETL MRAKDK T         PLTIEAAGQKYAQTTEFRYLGGLVNEHGDLTREI+YRSRGAWAC RRYG+ELFD P+AP RLK+RLL AEAMEALLYGCMTWSPLSGHYQTLRS HHRLLLRVI YKRKKDTYRQLSYAQTLKRVECQSVEATIRQRRLLFAGALARQPDGRLPKRLMLG+LAGG+K R+GGQEQNWPK +LDDLKAFGADHGSTKTDPCCLGI VPKDTAPKL+WTEAAKVEGGVPWHA   QGAERFMTSWHEKEEEASRQRALKRNHKP TNGAGG QETDET REESKR ETDRVARYVPD
Sbjct:  123 EGLARMMTIIVEVFGEFGLTVSEEKTETLPMRAKDKPTTTSQNAPPPPLTIEAAGQKYAQTTEFRYLGGLVNEHGDLTREINYRSRGAWACHRRYGRELFDTPQAPSRLKVRLLQAEAMEALLYGCMTWSPLSGHYQTLRSIHHRLLLRVIEYKRKKDTYRQLSYAQTLKRVECQSVEATIRQRRLLFAGALARQPDGRLPKRLMLGKLAGGKKRRKGGQEQNWPKRMLDDLKAFGADHGSTKTDPCCLGISVPKDTAPKLKWTEAAKVEGGVPWHA---QGAERFMTSWHEKEEEASRQRALKRNHKPPTNGAGGRQETDETVREESKRNETDRVARYVPD 461

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BLAST of Ec-27_006800.2 vs. uniprot
Match: A0A6H5JKQ7_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKQ7_9PHAE)

HSP 1 Score: 560 bits (1444), Expect = 5.450e-193
Identity = 293/357 (82.07%), Postives = 306/357 (85.71%), Query Frame = 1

Query:  835 GMLYADDAGVVSRSAEGLTRMMTITVEVFEEFGLTVSE-KTETLLMRAKDKSTXXXXXXXXSPLTIEAAGQKYAQTTEFRYLGGLVNEHGDLTREISYRSRGAWACLRRYGQELFDRPKAPFRLKIRLLLAEAMEALLYGCMTWSPLSGHYQTLRSTHHRLLLRVIGYKRKKDTYRQLSYAQTLKRVECQSVEATIRQRRLLFAGALARQPDGRLPKRLMLGELAGGEKPRRGGQEQNWPKCVLDDLKAFGADHGSTKTDPCCLGIPVPKDTAPKLRWTEAAKVEGGVPWHAVVLQGAERFMTSWHEKEEEASRQRALKRNHKPTTNGAGGGQETDETAREESKREETDRVARYVPD 1902
            G + +DDAGVVSRSAEGL RMMTI V++F EFGLTVSE KT TLLMRAKDK T         PLTIEAAGQ+ AQTTEFRYLGGLVNEHGDLTREI+YRSRGAWACLRRYG++LF RP+A FRLKIRLL AEAMEALLYGCMTWSPLSGHYQTLRS HHRLLLRVIGYKRKKDTYRQLSYAQTLKRVECQSVEATIR RRL+FAGALARQPDG LPKRLM GELAGGEK RRGGQ+QNW KCVLDDLK FGA+ GSTKTDPCC GIPVPKDT P L+WTEAAKVEGGVPWHA VLQGAERFMTSWHEKEEEASRQRALKRNHKP                  SKREETDRVARYVPD
Sbjct:    2 GDVVSDDAGVVSRSAEGLARMMTIIVDLFGEFGLTVSEQKTATLLMRAKDKPTTTSQPAPPPPLTIEAAGQENAQTTEFRYLGGLVNEHGDLTREINYRSRGAWACLRRYGRQLFHRPQALFRLKIRLLQAEAMEALLYGCMTWSPLSGHYQTLRSIHHRLLLRVIGYKRKKDTYRQLSYAQTLKRVECQSVEATIR-RRLMFAGALARQPDGLLPKRLMFGELAGGEKRRRGGQKQNWLKCVLDDLKVFGAEDGSTKTDPCCFGIPVPKDTEPTLKWTEAAKVEGGVPWHAAVLQGAERFMTSWHEKEEEASRQRALKRNHKPXXXXXXXXXXXXXXXXXXSKREETDRVARYVPD 357

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BLAST of Ec-27_006800.2 vs. uniprot
Match: A0A6H5J984_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J984_9PHAE)

HSP 1 Score: 550 bits (1416), Expect = 2.230e-188
Identity = 296/395 (74.94%), Postives = 305/395 (77.22%), Query Frame = 1

Query:  838 MLYADDAGVVSRSAEGLTRMMTITVEVFEEFGLTVSEK-TETLLMRAKDKSTXXXXXXXXSPLTIEAAGQKYAQTTEFRYLGGLVNEHGDLTREISYRSRGAWACLRRYGQELFDRPKAPFRLKIRLLLAEAMEALLYGCMTWSPLSGHYQTLRSTHHRLLLRVIGYKRKKDTYRQLSYAQTLKRVECQSVEATIRQRRLLFAGALARQPDGRLPKRLMLGELAGG---------------------------------------EKPRRGGQEQNWPKCVLDDLKAFGADHGSTKTDPCCLGIPVPKDTAPKLRWTEAAKVEGGVPWHAVVLQGAERFMTSWHEKEEEASRQRALKRNHKPTTNGAGGGQETDETAREESKREETDRVARYVPD 1902
            MLYADDAGVVSRSAEGL RMMTI V+VF EFGLTVSEK TETLLMRAKDK+T         P TIEAAG K  QTTEFRYL GL NEHGDLTREI+YRSRGAWACLRRYG+ELFDRPKAPFRLKI LL  EAMEALLYGCMTWSPLSGHYQTLRS HHRLLLRV GYKRKKDT+RQLS+AQTLKRVECQSVE T+RQRRLLFAGALARQPDGRLPKRLML                                             EK RRG QEQNWPKCVLDDL+AFGADHGSTK DPCC GIPVPKDTAP L+WTEAAK             GAERFMTSWHEKEEEASRQRALKRNHKP TNGAGGGQETDET REESKREETDRVARYVPD
Sbjct:    1 MLYADDAGVVSRSAEGLARMMTIIVKVFGEFGLTVSEKQTETLLMRAKDKATTTSQPAPPPPRTIEAAGPKNTQTTEFRYLAGLFNEHGDLTREINYRSRGAWACLRRYGRELFDRPKAPFRLKIHLLQTEAMEALLYGCMTWSPLSGHYQTLRSIHHRLLLRVTGYKRKKDTFRQLSFAQTLKRVECQSVEVTLRQRRLLFAGALARQPDGRLPKRLMLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKRRRGRQEQNWPKCVLDDLRAFGADHGSTKADPCCFGIPVPKDTAPTLKWTEAAK-------------GAERFMTSWHEKEEEASRQRALKRNHKPPTNGAGGGQETDETGREESKREETDRVARYVPD 382

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BLAST of Ec-27_006800.2 vs. uniprot
Match: A0A6H5JTZ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTZ8_9PHAE)

HSP 1 Score: 543 bits (1398), Expect = 1.470e-186
Identity = 277/326 (84.97%), Postives = 291/326 (89.26%), Query Frame = 1

Query:  895 MMTITVEVFEEFGLTVSEKT-ETLLMRAKDKSTXXXXXXXXSPLTIEAAGQKYAQTTEFRYLGGLVNEHGDLTREISYRSRGAWACLRRYGQELFDRPKAPFRLKIRLLLAEAMEALLYGCMTWSPLSGHYQTLRSTHHRLLLRVIGYKRKKDTYRQLSYAQTLKRVECQSVEATIRQRRLLFAGALARQPDGRLPKRLMLGELAGGEKPRRGGQEQNWPKCVLDDLKAFGADHGSTKTDPCCLGIPVPKDTAPKLRWTEAAKVEGGVPWHAVVLQGAERFMTSWHEKEEEASRQRALKRNHKPTTNGAGGGQETDETAREESKRE 1869
            MMTI VE+F EFGLTVSEKT ETLLMRAKDK+T         PLTIEA GQKYAQTTEFRYLGGLVNEHGDLTREI+YRSRG WACLRRYG+ELFDRPK+PFR KIRLL   AM+ALLYGC+TWSPLSGH QTLRS HHRLL RVIGY+R KDTYRQ SYAQTLKRVECQSVEATIRQRRLLFAGA+ARQPDGRLPKRL+LGELAGGEK R  GQEQNWPKCVLDDLKAFGADHGSTKTDPCCLGIPVPKDT PKL+WTEAAKVE GVPWHA VL GA+RFMTSWHEKEEEASRQR LKRN KPTTNGA GG + DETA+EESKRE
Sbjct:    1 MMTIIVEIFGEFGLTVSEKTTETLLMRAKDKTTTSSQPAPLPPLTIEATGQKYAQTTEFRYLGGLVNEHGDLTREINYRSRGVWACLRRYGRELFDRPKSPFRPKIRLLQVGAMKALLYGCVTWSPLSGHCQTLRSIHHRLLHRVIGYERMKDTYRQFSYAQTLKRVECQSVEATIRQRRLLFAGAMARQPDGRLPKRLVLGELAGGEKRRSAGQEQNWPKCVLDDLKAFGADHGSTKTDPCCLGIPVPKDTGPKLKWTEAAKVEEGVPWHAAVLMGADRFMTSWHEKEEEASRQRELKRNPKPTTNGAKGGHK-DETAKEESKRE 325

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BLAST of Ec-27_006800.2 vs. uniprot
Match: A0A6H5JLT1_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLT1_9PHAE)

HSP 1 Score: 526 bits (1356), Expect = 1.120e-176
Identity = 264/301 (87.71%), Postives = 272/301 (90.37%), Query Frame = 1

Query:  808 LDRARRAVWGMLYADDAGVVSRSAEGLTRMMTITVEVFEEFGLTVSEK-TETLLMRAKDKSTXXXXXXXXSPLTIEAAGQKYAQTTEFRYLGGLVNEHGDLTREISYRSRGAWACLRRYGQELFDRPKAPFRLKIRLLLAEAMEALLYGCMTWSPLSGHYQTLRSTHHRLLLRVIGYKRKKDTYRQLSYAQTLKRVECQSVEATIRQRRLLFAGALARQPDGRLPKRLMLGELAGGEKPRRGGQEQNWPKCVLDDLKAFGADHGSTKTDPCCLGIPVPKDTAPKLRWTEAAKVEGGVPWHA 1707
            LDR RRAVWGMLYADDAGVVSRSAEGL RMMTI VEVF EFGLTVSEK TETLLMRAKDK           PLTIEAAGQ+YAQTTEF+Y GGLVN+HGDLTREI+ RSRGAWACLRRYG+ELFDRPKAPFRLKIRLL AEAMEALLYGCMTWSPLSGHYQTLRS HHRLL RVIGYK KKDTYRQLSY +TL+RVECQSVEATIRQRRLLFAGALARQPDGRLPKRLM GELAGGEK RRGGQEQNWPKCVLDDLKAFGADHGSTK DPCC GIPVPKDT P L+WTEAAKVEGGVPWHA
Sbjct:  254 LDRVRRAVWGMLYADDAGVVSRSAEGLARMMTIIVEVFGEFGLTVSEKKTETLLMRAKDKPATTSQPASPPPLTIEAAGQEYAQTTEFQYPGGLVNDHGDLTREINCRSRGAWACLRRYGRELFDRPKAPFRLKIRLLQAEAMEALLYGCMTWSPLSGHYQTLRSIHHRLLFRVIGYKLKKDTYRQLSYPRTLERVECQSVEATIRQRRLLFAGALARQPDGRLPKRLMFGELAGGEKRRRGGQEQNWPKCVLDDLKAFGADHGSTKNDPCCRGIPVPKDTPPTLKWTEAAKVEGGVPWHA 554

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BLAST of Ec-27_006800.2 vs. uniprot
Match: A0A6H5K2V4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2V4_9PHAE)

HSP 1 Score: 510 bits (1313), Expect = 1.100e-173
Identity = 257/287 (89.55%), Postives = 262/287 (91.29%), Query Frame = 1

Query:  898 MTITVEVFEEFGLTVSEK-TETLLMRAKDKSTXXXXXXXXSPLTIEAAGQKYAQTTEFRYLGGLVNEHGDLTREISYRSRGAWACLRRYGQELFDRPKAPFRLKIRLLLAEAMEALLYGCMTWSPLSGHYQTLRSTHHRLLLRVIGYKRKKDTYRQLSYAQTLKRVECQSVEATIRQRRLLFAGALARQPDGRLPKRLMLGELAGGEKPRRGGQEQNWPKCVLDDLKAFGADHGSTKTDPCCLGIPVPKDTAPKLRWTEAAKVEGGVPWHAVVLQGAERFMTSWHEK 1755
            MTI VEVF EFGLTVSEK TETLLMRAKDK T         PLTIEAAGQKYAQTTEFR LGGL NEH DLTREISYRSRGAWACLRR G+ELFDRP+APFRLKIRLL AEAMEALLYGCMTWSPL+GHYQTLRS HHRLLLRVIGYKRKKDTYRQLSYAQ  KRVECQSVEATIRQRRLL A ALARQPDGRLPKRLMLGELAGGEK RRGGQ+QNWPKCVLDDLKAFGADHGSTKTDPCCLGIPVPKDTAPKL+WTEAAKVEGGVPWHA VLQGAERFMTSWHEK
Sbjct:    1 MTIIVEVFGEFGLTVSEKKTETLLMRAKDKPTATSQPAPPPPLTIEAAGQKYAQTTEFRDLGGLANEHSDLTREISYRSRGAWACLRRCGRELFDRPQAPFRLKIRLLQAEAMEALLYGCMTWSPLNGHYQTLRSIHHRLLLRVIGYKRKKDTYRQLSYAQAPKRVECQSVEATIRQRRLLLARALARQPDGRLPKRLMLGELAGGEKRRRGGQKQNWPKCVLDDLKAFGADHGSTKTDPCCLGIPVPKDTAPKLKWTEAAKVEGGVPWHAAVLQGAERFMTSWHEK 287

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BLAST of Ec-27_006800.2 vs. uniprot
Match: A0A6H5K1X4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1X4_9PHAE)

HSP 1 Score: 488 bits (1256), Expect = 5.320e-162
Identity = 257/354 (72.60%), Postives = 263/354 (74.29%), Query Frame = 1

Query:  967 MRAKDKSTXXXXXXXXSPLTIEAAGQKYAQTTEFRYLGGLVNEHGDLTREISYRSRGAWACLRRYGQELFDRPKAPFRLKIRLLLA--------------------------------------------------------------------EAMEALLYGCMTWSPLSGHYQTLRSTHHRLLLRVIGYKRKKDTYRQLSYAQTLKRVECQSVEATIRQRRLLFAGALARQPDGRLPKRLMLGELAGGEKPRRGGQEQNWPKCVLDDLKAFGADHGSTKTDPCCLGIPVPKDTAPKLRWTEAAKVEGGVPWHAVVLQGAERFMTSWHEKEEEASRQRALKRNHKPTTNGAGG 1824
            MRAK K T         PLTIE AGQKYAQTTEF YLGGL NEHGDLTREI+YR+RGAWACLRRYG+ELFDRP+APFRLKIRLL A                                                                    EAMEALLYGCMTWSPLSGHYQTLRS HHRLLLRVIGYKRKKDTYRQLSYAQTLKRVECQSVEATIRQRRLLFAGALARQPDGRLPKRLMLGELAGGEK RRGGQEQNWPKCVLDDLKAFGADHGST TDPCCLGIPVP DTAPKL+WTEAAKVEG VPWHA VLQGAERFMTSWHEKEEEASRQRALKR+HKP  NGAGG
Sbjct:    1 MRAKGKPTTTSQPAPSPPLTIEVAGQKYAQTTEFWYLGGLGNEHGDLTREINYRNRGAWACLRRYGRELFDRPQAPFRLKIRLLQAKAMEALLYDCMTWSPLSGHYQTLRSMHHQLLLRIIGNRGAWACLRRYGRELFDRPQAPFRLKIRLLQAEAMEALLYGCMTWSPLSGHYQTLRSIHHRLLLRVIGYKRKKDTYRQLSYAQTLKRVECQSVEATIRQRRLLFAGALARQPDGRLPKRLMLGELAGGEKRRRGGQEQNWPKCVLDDLKAFGADHGSTNTDPCCLGIPVPNDTAPKLKWTEAAKVEGEVPWHAAVLQGAERFMTSWHEKEEEASRQRALKRHHKPAINGAGG 354

[Close]

BLAST of Ec-27_006800.2 vs. uniprot
Match: A0A6H5K2V9_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2V9_9PHAE)

HSP 1 Score: 484 bits (1247), Expect = 4.090e-161
Identity = 282/445 (63.37%), Postives = 291/445 (65.39%), Query Frame = 1

Query:  748 VVTRS-I*VEPG-TR*GLRGCT-LDRARRAVWGMLYADDAGVVSRSAEGLTRMMTITVEVFEEFGLTVSEK-TETLLMRAKDKSTXXXXXXXXSPLTIEAAGQKYAQTTEFRYLGGLVNEHGDLTREISYRSRGAWACLRRYGQELFDRPKAPFRLKIRLLLAEAMEALLYGCMTWSPLSGHYQTLRSTHHRLLLRVIGYKRKKDTYRQLSYAQTLKRVECQSVEATIRQRRLLFAGALARQPDGRLPKRLMLGELAGGEKPRRGGQEQNWPKCVLDDLKAFGADHGSTKTDPCCLGIPVPKDTAPK---------------------------------------------------------LRWTEAAKVEGGVPWHAVVLQGAERFMTSWHEKEEEASRQRALKRNHKPTTNGAGGGQETDETAREESKREETDRVARYVP 1899
            VV RS + +E G T  G  G T LDR RRAVWGMLYADDAGVVSRSAEGL RMMTI VEVF EFGLTVSEK TETLLMRAKDK T         PLTIEAAGQKYAQTTEFRYLGGLVNEHGDLTREI+YRSRGAWACLRRYG+E FDRP+AP RLKIRLL AEAMEALLYG                                                             LFAGALARQPDGRLPKRLM GELAGGEK  RGGQEQNWPKCVLDDLKAFGADHGST+TDPCCLGIPVPKDTAPK                                                         L+WTEA KVEGGVPWHA VLQGAERFMTSWHEKEEEASR+RALKRNHKP TNGAG GQ+TDETAREESKREETDRVARYVP
Sbjct:  115 VVLRSLVCLEEGKTEAGGGGETPLDRVRRAVWGMLYADDAGVVSRSAEGLARMMTIIVEVFGEFGLTVSEKKTETLLMRAKDKPTTTSQPAPPPPLTIEAAGQKYAQTTEFRYLGGLVNEHGDLTREINYRSRGAWACLRRYGREFFDRPQAPLRLKIRLLQAEAMEALLYG-------------------------------------------------------------LFAGALARQPDGRLPKRLMFGELAGGEKRSRGGQEQNWPKCVLDDLKAFGADHGSTQTDPCCLGIPVPKDTAPKFKXGELAGGEKRRREGQEQNWPKCVLDDLKAFGADRGSTKTDPCCFGIPVPKDTAPTLKWTEAEKVEGGVPWHAAVLQGAERFMTSWHEKEEEASRKRALKRNHKPPTNGAGEGQDTDETAREESKREETDRVARYVP 498

[Close]

BLAST of Ec-27_006800.2 vs. uniprot
Match: A0A6H5KA81_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA81_9PHAE)

HSP 1 Score: 489 bits (1258), Expect = 6.980e-161
Identity = 274/371 (73.85%), Postives = 296/371 (79.78%), Query Frame = 1

Query:  799 GCTLDRARRAVWGMLYADDAGVVSRSAEGLTRMMTITVEVFEEFGLTVSE-KTETLLMRAKDKSTXXXXXXXXSPLTIEAAGQKYAQTTEFRYLGGLVNEHGDLTREISYRSRGAWACLRRYGQELFDRPKAPFRLKIRLLLAEAMEALLYGCMTWSPLSGHYQTLRSTHHRLLLRVIGYKRKKDTYRQLSYAQTLKRVECQSVEATIRQRRLLFAGALARQPDGRLPKRLMLGELAGGEKPRRGGQEQNWPKCVLDDLKAFGADHGSTKTDPCCLGIPVPKDTAPKLRWTEAAKVEGGVPWHAVVLQGAERFMTSWHEKEEEASRQRALKRNHK-PTT-------NGAGGGQETDETAREESKREETDRV 1884
            G  LDR RRAVWGMLYADDAGVVS+SA+GL RMMTI VEVF EFGLTVSE KTETL+MR K++  XXXXXXX   LTIEAAGQ+YAQTTEFRYLGGLVNE GDLTREI++RS+ AWAC+RRY  ELFDRP APFRLK RLL AEA+EALLYGCMTWSP   HY  L++THHRLLLRVIGY+RK+ TYRQLSYAQ LKRV CQSVEAT+RQRRLLFAGA+ARQPDGRLPKRLM GEL GGE P RG  EQNW  C+ DDLK F A HGST       GIP P        W EAAKVEGGVPWHA VLQGAERFM SWH+ EE+ASRQRA+KR    P T       NGAGGG+E  E AREESKREETDRV
Sbjct:  271 GGLLDRVRRAVWGMLYADDAGVVSKSADGLARMMTIIVEVFREFGLTVSERKTETLVMRVKERQRXXXXXXXV--LTIEAAGQRYAQTTEFRYLGGLVNEQGDLTREINHRSKAAWACIRRYATELFDRPGAPFRLKARLLQAEAVEALLYGCMTWSPRRNHYGMLQTTHHRLLLRVIGYRRKRGTYRQLSYAQALKRVGCQSVEATVRQRRLLFAGAVARQPDGRLPKRLMFGELVGGENPGRGSPEQNWLICLKDDLKMFEARHGSTPDKRSFFGIPKPD-------WDEAAKVEGGVPWHAGVLQGAERFMASWHKGEEKASRQRAIKRGDSGPKTSLDTAPINGAGGGRE--EMAREESKREETDRV 630

The following BLAST results are available for this feature:

BLAST of Ec-27_006800.2 vs. uniprot

BLAST of Ec-27_006800.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KS82_9PHAE	5.840e-205	83.38	Reverse transcriptase domain-containing protein (F...	[more]
A0A6H5L417_9PHAE	3.360e-201	88.30	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5JKQ7_9PHAE	5.450e-193	82.07	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5J984_9PHAE	2.230e-188	74.94	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JTZ8_9PHAE	1.470e-186	84.97	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JLT1_9PHAE	1.120e-176	87.71	Reverse transcriptase domain-containing protein (F...	[more]
A0A6H5K2V4_9PHAE	1.100e-173	89.55	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K1X4_9PHAE	5.320e-162	72.60	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K2V9_9PHAE	4.090e-161	63.37	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5KA81_9PHAE	6.980e-161	73.85	Reverse transcriptase domain-containing protein n=...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_27	contig	chr_27:6232527..6244194 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Properties


Property Name	Value
Taxonomic scope	Metazoa
Seed ortholog score	97.8
Seed ortholog evalue	1.1e-17
Seed eggNOG ortholog	6500.XP_005092035.1
Length	2276
Hectar predicted targeting category	other localisation
Gene id	Ec-27_006800.2
EggNOG free text desc.	Ribonuclease H protein
EggNOG OGs	39TZY@33154,3BI15@33208,3D94V@33213,KOG1075@1,KOG1075@2759
COG Functional cat.	S
Best tax level	Bilateria
Best eggNOG OG	NA\|NA\|NA

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-27_006800	Ec-27_006800	Ectocarpus species7 Ec32 male_plus_femaleSDR	gene	chr_27 6232527..6244194 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-27_006800.2	Ec-27_006800.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	polypeptide	chr_27 6242759..6243826 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-27_006800.2.1	Ec-27_006800.2.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_27 6232527..6232658 +
Ec-27_006800.2.2	Ec-27_006800.2.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_27 6233061..6233677 +
Ec-27_006800.2.3	Ec-27_006800.2.3	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_27 6242668..6244194 +

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-27_006800	5UTR:Ec-27_006800.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	five_prime_UTR	chr_27 6232527..6232658 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-27_006800.2	CDS:Ec-27_006800.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	CDS	chr_27 6242759..6243826 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-27_006800	3UTR:Ec-27_006800.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	three_prime_UTR	chr_27 6243827..6244194 +

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at chr_27:6232527..6244194+
coding sequence from alignment at chr_27:6232527..6244194+

mRNA sequence

>Ec-27_006800.2 ID=Ec-27_006800.2|Name=Ec-27_006800.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=356bp
MLYADDAGVVSRSAEGLTRMMTITVEVFEEFGLTVSEKTETLLMRAKDKS
TTTSQPPPPSPLTIEAAGQKYAQTTEFRYLGGLVNEHGDLTREISYRSRG
AWACLRRYGQELFDRPKAPFRLKIRLLLAEAMEALLYGCMTWSPLSGHYQ
TLRSTHHRLLLRVIGYKRKKDTYRQLSYAQTLKRVECQSVEATIRQRRLL
FAGALARQPDGRLPKRLMLGELAGGEKPRRGGQEQNWPKCVLDDLKAFGA
DHGSTKTDPCCLGIPVPKDTAPKLRWTEAAKVEGGVPWHAVVLQGAERFM
TSWHEKEEEASRQRALKRNHKPTTNGAGGGQETDETAREESKREETDRVA
RYVPD*

spliced messenger RNA

>Ec-27_006800.2 ID=Ec-27_006800.2|Name=Ec-27_006800.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=2276bp|location=Sequence derived from alignment at chr_27:6232527..6244194+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
CACCCATGTAGTTGTTGAAGTGCTTGCCGTAATGTGCTGTCACGAACGCG
TACCCCCGATCCATGAAGTACACGTGTAGGTCGCCTGCCCACCCGATGCC
CACCTCTTGCAGGCAGATCACAGACCCTTTCGCTACCTCCGCATCCAGCT
TGTGCTTGACCCTCTTCAACCGGGTGGGAGCATCCAAGTTCCTAGGGCTG
CACTGAGGGAACCGGGTCGGCTCCGCCAGGTGGCTGCAGAGGATATTGTA
CGTCGCCACGCGGAAGTCCATCTTGTTCGGCCTCTTGGACCAGGAGCACT
TGAGCACGAGGTTGGCAGGAGGCGGTGTGGGCCGTACGAGGCGGCTGCTA
GTGGGGACGAGGGTACTACTCCTCGCGAACAGAAGGGAAGAAGCAGCGCG
GTGGCCAGTCCAGGCAAGCGATCTCATGCACAGCAGAAGAAGGAGGAGAG
CGTGGCGGTGGCACCCGGGGTTCGCCACGTTTCCGGCGACAACTGGGCTC
GCCGCACGAGAGCTCTCCAGTTCTGATACGCCAAGGCCAGAAAAGTTTGC
TCGGCTGGGGCGAAGGTTTCAATGGAAGTTCGGGAGGCATTTGTATGTAT
GATTTAAAGTATGAGGAGCCCTGCCCACCCACCCTGCCATCCGTCATCGG
CAGACCGTTGCTGCCAATGGCGCGATTCCCGCAGCAGAGAGGACTCGTCT
CAGCCCTTGCGGTGGGCCTTGCGATGACCACGAGGGTGGCTTCTTTCAGG
GTTGTCACCCGGTCAATCTGAGTGGAACCGGGTACCCGGTGAGGTCTGCG
GGGGTGCACCCTTGACCGAGCACGGAGGGCAGTATGGGGGATGCTGTATG
CCGATGATGCTGGCGTCGTATCGAGGTCTGCAGAAGGACTGACGAGAATG
ATGACCATCACCGTTGAGGTGTTCGAGGAGTTCGGGCTAACGGTGTCGGA
GAAGACGGAGACGCTCCTGATGCGCGCGAAGGACAAGTCGACTACAACAT
CACAGCCCCCCCCGCCTTCACCACTGACCATCGAAGCCGCGGGACAGAAA
TACGCCCAGACGACCGAGTTCCGGTACCTCGGTGGCCTCGTCAACGAACA
TGGCGACCTCACCCGGGAGATCAGCTACAGGAGCAGAGGAGCGTGGGCGT
GCCTCAGGCGATATGGCCAGGAGCTCTTCGACAGACCGAAAGCGCCATTC
CGACTCAAGATCCGCCTCCTCCTGGCGGAGGCGATGGAGGCACTGCTGTA
CGGCTGCATGACATGGTCACCACTCAGCGGCCACTATCAGACGCTGCGGT
CGACACACCACCGACTGCTCCTTCGAGTTATCGGGTACAAGCGCAAGAAA
GACACCTACCGGCAGCTCTCGTACGCCCAGACGCTGAAGAGGGTCGAATG
CCAGAGCGTTGAAGCCACGATCCGACAACGACGCCTACTGTTCGCGGGAG
CACTGGCAAGGCAGCCGGACGGGCGACTCCCGAAACGGCTGATGCTCGGC
GAGCTGGCGGGGGGGGAGAAGCCACGTAGGGGGGGACAGGAACAGAACTG
GCCGAAGTGTGTGCTCGACGACCTGAAGGCATTCGGGGCCGACCACGGAT
CTACGAAAACCGATCCATGTTGTCTCGGAATTCCCGTACCGAAAGACACG
GCACCGAAGTTAAGGTGGACGGAAGCCGCGAAGGTGGAGGGGGGAGTACC
CTGGCATGCGGTGGTGCTGCAGGGAGCTGAGAGGTTCATGACCTCCTGGC
ACGAGAAGGAAGAAGAGGCCAGCCGACAACGAGCGCTCAAACGAAACCAC
AAGCCAACAACCAATGGGGCGGGGGGGGGGCAGGAGACGGACGAGACGGC
GAGGGAAGAAAGCAAACGAGAAGAGACGGACCGAGTGGCACGATACGTGC
CGGATTGAATTTCTTTTAGCCAATCCCCCCCCCCCCAACGCTGAACAACG
CAGAACGGAGGAAGAGGTATACCAGCCGTAGGAGAGAGGAAGAGGAGGAT
AGACACACATGTCCATGTGGCAAATCGGAGGAGAGTAGACCCCACATAGT
TGGGGAGTGTGAGTTGTACAGGAAGGAAAGAGAGGATCTCGAGGAGGAAA
TGAGACAGAGAGGGTGTGACATGGACAAGTTTGGTAAATTAGACAACAGC
GAAAGAACGATCGCGATAATTGGGGATAGATGGTGGGCACAAGAGGCCCT
AGAGGACGGGGATAAGATGTGCAAGAAATTTTTATGGAGTTTGTGGCAGA
AACGTAAAGAGCTCCCAAATGTTGGG

protein sequence of Ec-27_006800.2

>Ec-27_006800.2 ID=Ec-27_006800.2|Name=Ec-27_006800.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=356bp
MLYADDAGVVSRSAEGLTRMMTITVEVFEEFGLTVSEKTETLLMRAKDKS
TTTSQPPPPSPLTIEAAGQKYAQTTEFRYLGGLVNEHGDLTREISYRSRG
AWACLRRYGQELFDRPKAPFRLKIRLLLAEAMEALLYGCMTWSPLSGHYQ
TLRSTHHRLLLRVIGYKRKKDTYRQLSYAQTLKRVECQSVEATIRQRRLL
FAGALARQPDGRLPKRLMLGELAGGEKPRRGGQEQNWPKCVLDDLKAFGA
DHGSTKTDPCCLGIPVPKDTAPKLRWTEAAKVEGGVPWHAVVLQGAERFM
TSWHEKEEEASRQRALKRNHKPTTNGAGGGQETDETAREESKREETDRVA
RYVPD*

mRNA from alignment at chr_27:6232527..6244194+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>Ec-27_006800.2 ID=Ec-27_006800.2|Name=Ec-27_006800.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=11668bp|location=Sequence derived from alignment at chr_27:6232527..6244194+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
CACCCATGTAGTTGTTGAAGTGCTTGCCGTAATGTGCTGTCACGAACGCG
TACCCCCGATCCATGAAGTACACGTGTAGGTCGCCTGCCCACCCGATGCC
CACCTCTTGCAGGCAGATCACAGACCCTTTCGATATCTGCAACGCGCATA
CGACACACGATACACGCCAAAAGCAAGGAGGTGGGAAATGTTTGGGTCCC
TTGGGTCAAATCATGGCAAAACCTCCTCCCTGCAGGGAAGCTGTGTAGTC
TAGCCAGTAACCGAGCAACCGAGCTGTACAACGGCTGTAAGCGGTGGTGT
GTAGTTGGAAAGGGGTCGGGACCCGGTTCCAAGCAACTGACTGCGACAAG
ATTACGGCGGCGTTGGGGTAGCGCCTAGCTATCTCGCTGTGTAGCAGCAA
CTGCACGAGAAGCAAGCAGCACAAGAAACATGCACACAGACAAGATGCAT
CGACTTCGATGTTCGATGTCGTGGCTGTGTGCTACATACATGTCTTCTTG
TCAAGCCGTGTTGCCGTGTTCCGCCCGCACCCACCTACCTCCGCATCCAG
CTTGTGCTTGACCCTCTTCAACCGGGTGGGAGCATCCAAGTTCCTAGGGC
TGCACTGAGGGAACCGGGTCGGCTCCGCCAGGTGGCTGCAGAGGATATTG
TACGTCGCCACGCGGAAGTCCATCTTGTTCGGCCTCTTGGACCAGGAGCA
CTTGAGCACGAGGTTGGCAGGAGGCGGTGTGGGCCGTACGAGGCGGCTGC
TAGTGGGGACGAGGGTACTACTCCTCGCGAACAGAAGGGAAGAAGCAGCG
CGGTGGCCAGTCCAGGCAAGCGATCTCATGCACAGCAGAAGAAGGAGGAG
AGCGTGGCGGTGGCACCCGGGGTTCGCCACGTTTCCGGCGACAACTGGGC
TCGCCGCACGAGAGCTCTCCAGTTCTGATACGCCAAGGCCAGAAAAGTTT
GCTCGGCTGGGGCGAAGGTTTCAATGGAAGTTCGGGAGGCATTTGTATGT
ATGATTTAAAGTATGAGGAGCCCTGCCCACCCACCCTGCCATCCGTCATC
GGCAGACCGTTGCTGCCAATGGCGCGATTCCCGCAGCAGAGAGGACTCGT
CTCAGCCCTTGCGGTGGGCCTTGCGATGACCACGAGGGTGGCTTCTTTCA
GGTGAATTGTGAATACAGCAGTTGGTTCAGAACGTACGTGAGGCCCTCTC
TGTCATCGCATCTCATTGACTGCTACTTTGTACACGCTGACAACATACAA
ACCAACACTGCCTGTTGCTGCTGCTGCTGCTAGTGCTTCACTTAGGCGTC
GTTCGTGCGGCACGGCCTGACAATCATGGACGTTGCTTACTGTGGGAATA
GTTTAAACTGTCAGTCACCCTTGTGGGTTGTCGGTGGAGTTGTGGGTGTC
ACCGGCATGCAACAGCAGCGTCATGTTGTACAAGGATCGGACGTCCTGAA
GTAGAGGCGCCCTGGTCTGAGGGCGAGGGTGGGAGATATATGGAAGTAGA
GATGGTTGTAGTAAGGTATTGAACAGTATCGGGGGATACCAAGAGGGTGA
CGCTGTGGTGGTTGATGGTGACGTACAGGGACGTCATCACGCCCGAATTT
AGTATGATTCCTGAAAAAAATATATATTATTAGTAGGCACAAACATGATT
AAATGCACTCTGTTGCATTAACCGCACCGAAGACGAACGCAGCAGACGCG
AAAAAGTGGACGGAACTGGTACTGCAGCAGTTGACAGCAGGGAAAGCTTG
ACTTCGCAACACAAAGAAGATGCCTCTCCCTCCCCTCCCTCTCTCTCCCT
TCCTTTTCTCCGTCTCAATGTACAATGAAACCGCACCAAACACGAAGGCA
AGCAGACGCGAAAAAATAAACGGAAGTCCTACGACAGCAGTTGACACCAG
GGAAAGCTTGACTGCGCACACGAAGAAGATGCCCTCTCCACACCTCTCTC
TCTCCTTTCGCTCTCCCTTTCCGTGTGACTGTCCTCACCCTCTCCCATTC
CCTGTATCCGTTTCATACCGTCTCTGCCCACCCCTCCCCCCTTTTTCTCT
CGTTATCAATTTTTCCCACCCTATATCTGTCCTTCTCCGTCTCCCTCTTA
TTATTTCCTGTTCCCCCTCACTTTTTCTCTCCCTTTCTCTGCCTTTCTTT
CTCTCTTTCTTTCTCTCCCTTTCTCTGCCTTTCTTTCTCTCTTTCTTTCT
GTCTCTCCGTCTGCCTTTCACCCTGCGTCTCACGCTACCTTTCCCTCGGG
CCGTTCATCCCGCCTGCCTCTCCTATCCCCCTGGTTATGACGGGTGACTC
CCCCATTTGCTTTGTCTCTCACTCTATCTGTCCCTCTCAAAAATGGTTAC
GATTCCCTTCCCAAGGGAGTTGAGGCTTGAGACATGATGATGCAAACTTG
CCCCGCACAGCAAACTTGTTCCCTTCAGCAAAAGTCAGACGTGACCACCT
GAGATTGGAGGAAAGGGTTGAGGAATATTTGGTTGCATCAGTTTGAATGT
GTCATAATGTCTTGAGGCACTGGTAAATCGCAAATGCACTTCGTCCGACG
TGGAAGAAAGCGCAGGAGGCAAAGTACTCTGATCGAAGTGGACATTTATT
TGTTTTTGAAATATTGCAGATGCAGCAGTTATTTCAGGCTGACCCATGTA
CGTGAATGGATTTGACGTTTTACTGATGTATTCGTCGAAAGAAGAATATG
TTGTAGGTGGCATGCCGGAAGAATATAGCAGTTCAACACCTACGCCGTTT
GATATGTGGAGGTTCTGGTTCATTCTGTTGTCAGAAATATAATTTACAAT
TTGATGACGAACTTGCAGATGCAATTCAGGGTCTCCGAGGAAGTGTCGCG
CTAGCGCTCTGAACCCACAGGCACCGTCACCTATCTCAGGTTGCAATACC
CACGTAGGTTGCGGTGGATCACGGGTGTTGGTATTACCTGTGGCAGCTTC
TATGAAAGGAGAATAAACGATGTTTTTTCTGTGTAAGGAATGCCGCGAAG
AATTTGAGAAGAGGGAAGTAAAATCATAACCGAACTTTTGTTTCTTGCTC
GACTTAAGGCGACATACAGTTGACCATGATCAAATGCTGAAGATCTTAAG
TCTAAACCAACCTTAGATAGGCTCTGCCCCTGGGCTTTGTTAATACTCAT
TGAGTATGCAGCTCTCAAAGGGTATTGAACTCGCGAAAAAGAAATACCTT
TTTTCCCGACTTGTGCAGTAAAGTTTATTCTGGGAATGAAGACGATGGGA
TGAGGGGATTCCTCGGTGAGAAGCTCAGCTTGAATTACACGGCTGTTGGG
GGAGATGGCATGAAGAATGCATTTTTGTCCATTTACCAAGCCCTCGGAGA
AGTTAATATTTCTAACCAACATTGCCAACGTGTTAGACTTCAGTTTGAGA
TCGTGAGGAGGGACACCTGTCACGTTGAATTGGTTGAGGTGTTGAGGATC
AGCGAACGCTGTGTTCGAGTTGGATTCATCAGATATCAGTGAATCTGAGC
TCAGAAATGATACGAATTGTCCACTCCTTCGGGAGGCTATGTCTTCGTTC
GAACAATCGACGGCGTGATTTGTCGTGGCTAGAATTGCGCGATCGTTCCA
CTGCTTTGCGTCTTCGTTTATGTTGGGGTAAACGAAATTTATGAGGTCGT
CAAAATCAGTGGTACATTGCAGCTGAAAGTGATCATCAGTATTTGGCATG
CAGTGGTTGTTGAGAGGCATCATAGGCTGTTCGTTTACTTGGGAGAGAGG
TATTTTGTTCTCTCCAACACGTTGAACAAAATCAGCATATTGAGGATCTT
CTTTGTCCCGCTGTGAAATTGTTAGACGAAGGCGGTCAACGTGATTCCAG
AGATGACTTGAAATGAAGGCCACATCAACCGTATCTGTTGGACTGCTGCT
CCCTTTTGTCACGGGTCCAATTTGACGCCAATCCCCTGAAAAAAGCATAG
TTTTCCCACCGAAAAGGTTTTTATTTCTGGTTATATCTTGAAGTGTTCTG
TTTAAAGCCTCGACGCAATATCTGTGAGTCATGGGTAGCTCATCCCACAC
GATAAGATCAGAACATCGAATGAGGTGGGCTCGTTGGGTATTTGTGCTGA
TGTTGCAAACACACGAAGGAGTGAGGTTTTCGTCCATGGGAAGCTTAAAC
ATGGAATGAGCCGTCCACGCGCCAGGTAGTTGCAAAGCGGCGATACCTGT
TGAAGCGACGATAAGAACTATTTTGCCTTGGCCTCTTAGCCTTGCTGCTA
TACACTTGATGGTATACGATTTACCTGTGCCTGCCCGACTGTCTATCATG
TATGCTTTGCCATCTCTACTTGAGACTGATTTCAAAACCTTGGAGTACAC
GTCGTGCTGTTCAGAAGTTAGTTTGGGCTCGTGCATGTCTGCATACGCTG
TGCAATCCGCGCGAGGGAATGAGTTCTTCATTCGTTGCAGTTCAGTCGTG
TTGTGCATTGCAGGTGGGAGATTTACTTGTTCGTTTGTTTTCCCATGAAG
TTGCAATTTCAAATCTATTTCACGCAAACCCTCTTGAATGGCGTCTTCGT
GCCTCATGTGCATCTTGAAGTCCTCGAGCAAACTGTCCTGAAAATCAGAC
CATAGCTTGGCTGCAGGGGCGCCATCCAAAATTAGAGTAACAAAGAGAGA
ACGCAGCTGAGATCCGACCTGAAAGCCTGATGCCTCTTGCATGCAGATAG
AATACTCTTCGTCGCCTGTAATAAGACCTCTTGCTCTGGCAGCGTCATGG
TATGTATCATGTAATATTTCACCGCTGTGTTCGCACGGAACTTTTCGCAT
GTCTTCGAAAGATCGGCCTGGAATCCGATGAAGCAAAAGTCTCAGGTAGA
ACAAATCACCTACCGCAGGATCCTGAAAAGATATCCGACAAACATGAACG
GAATTCGCTCTCCTTTTTGATACAATATTGCTGTAGGAATCTAAGAACTT
TCCGGGCGGTGGTGCTGAAGGTAAGGGGGCGTCCTTTTTTGGCTTTGTGA
CGGTGTACTGTTCGTAGTAGTCAAGAAGGGTAAGACTGTCAAAACACTCA
TCAGCAGGTCTTGCGAAGTAGTTCATGAGAGGAGAATGAGTTGCTTCAGT
GATTTGCAGACGCTGTTCTTGGGTAGCCGAAGCCGGGAAGGTGACGTATT
GTTCGCCTTCGAGATGGGCATATATCTTTGTCACCGCGGGATATCTGTCG
TACATGTTAAAACCTAGAAGTCTCCACATTGCTTCGGACGCGCTTAGATA
TCGTGTTTTCCTATACACTTCTATCTCGTCTGTGATCCCGTCTATTCTAC
AGCGTATAACGTCCTGGGATTTATGCGTATATTTGAATAAGTATTTTATG
CAAGCTGTAGCAGTTACGATGTCGATGTGTATGTGGCAATCAAACCGCAT
TAAGAGCCATGGATTGTAACTGGCTACCCACTCGTCACCTATTGGAACGT
CCTTGTACACGCCGTTAACCTTAGCTCGCACAGTAGGTTTTTCGCTGTCG
GGTCTGTTTACTCTTCTGTATTCTACTCTTCCTGTTTTGTCGTTAATTGA
GGCAGATGCTCTGAAAGGTTGCGGAAAGTGTTTGTTGCATCGTTTGCGGT
TGGTTTCTCTGTCTTCCTGCATACAGGGGGCGTCAACGTTGGTTGCACCA
CATGGTCTGTGTATCATATACTTTAACACCTTTTCTCTCAGTACACCATT
AGCAATGGTTTCATCTGGAATTCCTGCCCAAACCCATTTGTCCATTTCAT
GGAGCTTGTCGGGACCGTCACCTTTGAAGGTGAAAAAACAATGAGCGTGC
GGATAACCTCTCTTTTGCCATTCTATTACACATAAGTGACTGTCATAAGG
ACCGAAAACCTTCCCGCTTTTTATTTCTTTCATAATTTCCTTCAGCTTGA
TTTTGAAAACTCTGGCACAAAGGTCTGGACGATCGTATGCGGTCTGGCCC
GGCTTCAAATTAAGTCTAATTTCTGGCCAATCGGCATTCATTGTGATTGT
GATGAACAGGTGAGGACGCCCTCGTCTATTTACAATCGCAAGCGCATCCT
CTGTATCTGATTTTTTTTTGGCAAGAGAACCGTGAAACGTGGCAGGGAGA
ATTTTGCCGGGATTGTCAGCGTTTGAAGAACGACGAATATCACGATCTGT
ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NGAACGACGAATATCACGATTTGTAGCTAATCTTTGCTGCAAAGGGCTAT
GTTCGACGAAATATAGTTGGTTTTCCTCAAGTCTGCTCAGGGAATCGCAA
GCCCATTCCTGAGCAATCAAACTGTTCGTCTTAAAAATTTCTTCTGATAG
AATGCGCTGCCGGCAGTAGAACGGGAAGGGCACATGGTCAGTGTTGTTGA
GGTTCATAGTTTTAGATTTGAAAGGTGGGTTCTCTTTGGAGTTGCCCTTG
CTCCACCCTGCTTCCCCATGCAAGAACAAAAGCGGGAACTGAAGTGTCTC
ATAGGCAGGACTCCACAGGGGCATAAAACGCGGTTTGTCATCTGGACTGT
GTAAGGGATAGGTTACAACCGCACGCGGACCTTGACTCTCCTGGCCGGAC
GTATACAATAAAGCTGCAATTTCAGGAGCAGATGGAGTTTCACCCAAAAC
TGGACCGTCATTAAAGCGGCTCACGTTGTCAAATTCAATTCGAGGTGGTG
GTAAGTCGGGGTCATGAAGGGTAGAATCGGACCTCACAAAGTCTATAGCC
GACCTATACTCACGTGCCCATTTAATATTCGTATGAATATGAGTCCTCAA
GGTATTTGCTACATCGTGTCTCAAACTGAGAGAGGAGGCCTTTTGCGCAA
ATTCGCTGTCAAAAATGTAAAATCTACTTGAATTTGAAACGTTCAATTCG
GGGTACGTGAGAGATAGATCAAACAGACGGTGGTATGCTTTTCCGTGAAT
TGTAAGGATGCTTTTGCCTCTGGGTTGTGTCCACGTTCGTTTTTCAATAC
CTCCTGCACCTAACGCTGTAAAACTAAACATGCCATTGTATCTTCTCTGA
TTATTTCTGAAATGAGAGGTAGAAAAAAGTTGCATAAGGTCACCAGGAAT
CGTACGCAGGCGAGGAATTGCATATTTCCCCTTATTGCAACAATTTAAAC
TCTCTTCCTTCCAAAGCTGTGACGTACAATGGGGACAAATGGGATTATTT
TCATGGGTTAACTCCGGATTTGCAAATTCAAAAGCATGTAAGGGATAAGA
AATAGAAGGCGAATCAAAGTCCTGAACACCAAACCGAGGGCTACCTTCTA
TTTCACTGTCTTCTTCGTTGTCACTAAGGTGAACGTTCTCTGGGGTTCGC
GGTGTTCTGTTACGCATTTGGTTGAAATGTTGCTGAACAATGTTCAAATC
GGATTGGCCACGAGCTTGAGATCTAGCTCGTCGGTCTCTCAAAATTTGGG
CACGTCTGGCTCTTCTCTCTGAAGCGTGGAGTTGTGGTCGGGTAGTTAAA
TCAGTTTCACGCAAAGCACGACGCTCTCTTAGAATTTGCGCACGTTGAGC
TCTTCTTTCTTTGGCTTGTGTTTGTCTTCGGGACGACATGAGGGAAATAA
TTCAGGTTGTTTAGGTGGCAATTGCCAATTAAGAAAATTCACGAGAAAGC
CAACAAAGGGCTTCGCACCTCCCTAGAAGTCCTTGAAGCTGTCCTTCACG
GTAGCTGAAGGCTTGGCGTACTCTTCTTCGTGGGTTGTGCCGAGCTCCTT
GTAGGTCTTCTTGGTGTCCAGGATGCCAGAAACGGACTGTTCCCACAGGC
GCTTGGAGCACCACAGGTGGAGGGGCGGGTCCTCCCACTCCTTCACGATC
ACGTCTCCGGCCTTGATTTTGCCGGTGCAGGCCTTATTGATGTCGTTGCC
GGTACCACGAGTTGACATGAAGCAGGTCTTCTGAAAAATCGGCAAGCAGA
AGAACCGGGAACAAAATGAAAGAACACACGAACGCATGTCATATCAATCA
GACGGATTGGGGCAGGAAAAGCACAGGAGAAGCGGGTTCATGAAGTGGCT
CTCGATCCAAACATTTCACCAGTTAGACATTCACTAAATGGGAGGATACA
CTGAAAATATACAGATATAGCGGCCACGTCGTCAGCCCCACAGAGATATC
CAAATGCGATAAAAATTTCTCCAAAAATAGACTCACACCCACAACCGGTT
GGCCTTTCGCCACCTCCGTGCCGTTCTTGAACCGACTGTTGTCGGAGGTC
TTCGCACCGCAGCACAGGTTAAAGCACGCGTGCACGTTGTTCCACACTGT
GTCCAAAAAGAATCGGTAGACACGCAGAAATGATTCGCGGGCAATTGTCG
GTGCGCGTTGTTTGTTCCACATTTTGTGCAAAAATAATGGACACGAAGAA
ATGATGCGTGGACACTTTTCAATATTTTAGTTACTACTCAAAATGCATGC
AAGGTCTTCACGTCTAATTCATGAAAGCACGAACGGACAATGGAGGTCTG
CTGACACTCCACGTCTAATTCATGAAAGCACGAACGGATAATGGAGGTCT
GCTGACAACCCATGCATGTATAGGCTATCTGTCGTGTTTCGCGAAGCAAA
ATCAAACCAACGCTATGTACGTGCAACGAACGCTACGCTCAATGAAAACT
CACCGGTATAGCCGCGATCGTCCTTCTCCTCAGTAGGCTCGCCAAGCGTG
GGCGTGCCTCCGACGGGAGTGTTGCACACCAAGCAGTACTTGGGGTTGTC
CTTGCTGGGCTGCAGGATGGTGGTCGTCACCTGGCAGCTGTTGCCGTCAC
CATACACACGCTGGTCGCACGAGCCGAACTCACCCCGGCCGTTCTTTTTT
TTAACGACCTTGATGTGTCCTTCGCAAGACGGAGACGGGCAAGGCCAGTC
GGGGTTGCCTGGCTCAATGATCGCCCGAGGCTTCACCGAGCTTGCGTTCG
TCCTTGACTGATCGGACTTGCGCTTGTTCGGTGAAGCCTTGGACAGTTCA
GACAGAGAAAGACGTCCCTTCATGATCGAGCGTTTTTTTTGGTATGTGCG
GGGGGCGGTGCGGTATGCTATTTTGCCGGGCTGTTTCACTGACGTGGAGC
AATGACCCGATCGAATCTAACATTCACAGTTTCACTGACGTGGAGCAATG
ACCCAATCGAATCTTACATTCACAGTGACGAATCTAACATTCGCGAAGTA
CTGTAAGTTAACCTATCTTTCGCCGCTCCAGAGGATGGACACAGGATGCC
GTCTCAAACAGTCAATCTTCCATACATATGACACTGATTGAAATATTGAA
ATTATGCCCCACGTGAGGGACTGCTGTGACATGCCACACTTGCGATGGTG
AAAATGACACCCAATCGAATCTAACATTCACAGTTTCACTGACGTGGAGC
AATGACCCAATCGAATCTTACATTCACAGTGACGAATCTAACATTCGCGA
AGTAAGTTAACCTATCTTTCGCCGCTCCAGAGGATGGACACAGCATGCCG
TCTCAAACAGTCAATCTTCCATACATATGACACTGATTGAAATATTGAAA
TTATGCCCCACGTGAGGGACTGTGACATGCCACACTTGCGATGGTGAAAA
TGACACCGTATCCAACACTCGTCGAACTTCGCTGCCTCAGAGGATCTTCA
TGTGTCACTTTCTGATGTCAAGCATCGCTAATGCCAATGTCCGGGACTGT
GAGATGGTGCTGCACTCCGCCGGTTAAAACCAACACTACTTTAGGCAGAT
GACACTTGCTTGTAGACCGACGTTTCGCGTGCCTGAACACCGTGCCGTGA
TGGAAAAACTTTGGAGAGCACGCCCAGCGCTTTCAAGGCCTTTCAACTTG
TAAGGGCGCGTAGAGGTGAAGGGTTCCTAATACGTACTGTCGTACTGTTT
TTAGAGTAGGCAAAGTTTCGCCGCTTCGCTCTCGTGAGCCCGGTTCTGCT
CTCTCGTGAGCCCTCAGCCTAAAACGTCATTCTAGGTACCCATAATTAAC
CACTGCTGTGTTCCGGACAGCGCAGTACATTGATATGCATACGCTGCGTT
AATTCTGTACTGCAACCCCGTTCGCTGGCATCCCTGAGTAGGGTTGTCAC
CCGGTCAATCTGAGTGGAACCGGGTACCCGGTGAGGTCTGCGGGGGTGCA
CCCTTGACCGAGCACGGAGGGCAGTATGGGGGATGCTGTATGCCGATGAT
GCTGGCGTCGTATCGAGGTCTGCAGAAGGACTGACGAGAATGATGACCAT
CACCGTTGAGGTGTTCGAGGAGTTCGGGCTAACGGTGTCGGAGAAGACGG
AGACGCTCCTGATGCGCGCGAAGGACAAGTCGACTACAACATCACAGCCC
CCCCCGCCTTCACCACTGACCATCGAAGCCGCGGGACAGAAATACGCCCA
GACGACCGAGTTCCGGTACCTCGGTGGCCTCGTCAACGAACATGGCGACC
TCACCCGGGAGATCAGCTACAGGAGCAGAGGAGCGTGGGCGTGCCTCAGG
CGATATGGCCAGGAGCTCTTCGACAGACCGAAAGCGCCATTCCGACTCAA
GATCCGCCTCCTCCTGGCGGAGGCGATGGAGGCACTGCTGTACGGCTGCA
TGACATGGTCACCACTCAGCGGCCACTATCAGACGCTGCGGTCGACACAC
CACCGACTGCTCCTTCGAGTTATCGGGTACAAGCGCAAGAAAGACACCTA
CCGGCAGCTCTCGTACGCCCAGACGCTGAAGAGGGTCGAATGCCAGAGCG
TTGAAGCCACGATCCGACAACGACGCCTACTGTTCGCGGGAGCACTGGCA
AGGCAGCCGGACGGGCGACTCCCGAAACGGCTGATGCTCGGCGAGCTGGC
GGGGGGGGAGAAGCCACGTAGGGGGGGACAGGAACAGAACTGGCCGAAGT
GTGTGCTCGACGACCTGAAGGCATTCGGGGCCGACCACGGATCTACGAAA
ACCGATCCATGTTGTCTCGGAATTCCCGTACCGAAAGACACGGCACCGAA
GTTAAGGTGGACGGAAGCCGCGAAGGTGGAGGGGGGAGTACCCTGGCATG
CGGTGGTGCTGCAGGGAGCTGAGAGGTTCATGACCTCCTGGCACGAGAAG
GAAGAAGAGGCCAGCCGACAACGAGCGCTCAAACGAAACCACAAGCCAAC
AACCAATGGGGCGGGGGGGGGGCAGGAGACGGACGAGACGGCGAGGGAAG
AAAGCAAACGAGAAGAGACGGACCGAGTGGCACGATACGTGCCGGATTGA
ATTTCTTTTAGCCAATCCCCCCCCCCCCAACGCTGAACAACGCAGAACGG
AGGAAGAGGTATACCAGCCGTAGGAGAGAGGAAGAGGAGGATAGACACAC
ATGTCCATGTGGCAAATCGGAGGAGAGTAGACCCCACATAGTTGGGGAGT
GTGAGTTGTACAGGAAGGAAAGAGAGGATCTCGAGGAGGAAATGAGACAG
AGAGGGTGTGACATGGACAAGTTTGGTAAATTAGACAACAGCGAAAGAAC
GATCGCGATAATTGGGGATAGATGGTGGGCACAAGAGGCCCTAGAGGACG
GGGATAAGATGTGCAAGAAATTTTTATGGAGTTTGTGGCAGAAACGTAAA
GAGCTCCCAAATGTTGGG

Coding sequence (CDS) from alignment at chr_27:6232527..6244194+

>Ec-27_006800.2 ID=Ec-27_006800.2|Name=Ec-27_006800.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1068bp|location=Sequence derived from alignment at chr_27:6232527..6244194+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGCTGTATGCCGATGATGCTGGCGTCGTATCGAGGTCTGCAGAAGGACT
GACGAGAATGATGACCATCACCGTTGAGGTGTTCGAGGAGTTCGGGCTAA
CGGTGTCGGAGAAGACGGAGACGCTCCTGATGCGCGCGAAGGACAAGTCG
ACTACAACATCACAGCCCCCCCCGCCTTCACCACTGACCATCGAAGCCGC
GGGACAGAAATACGCCCAGACGACCGAGTTCCGGTACCTCGGTGGCCTCG
TCAACGAACATGGCGACCTCACCCGGGAGATCAGCTACAGGAGCAGAGGA
GCGTGGGCGTGCCTCAGGCGATATGGCCAGGAGCTCTTCGACAGACCGAA
AGCGCCATTCCGACTCAAGATCCGCCTCCTCCTGGCGGAGGCGATGGAGG
CACTGCTGTACGGCTGCATGACATGGTCACCACTCAGCGGCCACTATCAG
ACGCTGCGGTCGACACACCACCGACTGCTCCTTCGAGTTATCGGGTACAA
GCGCAAGAAAGACACCTACCGGCAGCTCTCGTACGCCCAGACGCTGAAGA
GGGTCGAATGCCAGAGCGTTGAAGCCACGATCCGACAACGACGCCTACTG
TTCGCGGGAGCACTGGCAAGGCAGCCGGACGGGCGACTCCCGAAACGGCT
GATGCTCGGCGAGCTGGCGGGGGGGGAGAAGCCACGTAGGGGGGGACAGG
AACAGAACTGGCCGAAGTGTGTGCTCGACGACCTGAAGGCATTCGGGGCC
GACCACGGATCTACGAAAACCGATCCATGTTGTCTCGGAATTCCCGTACC
GAAAGACACGGCACCGAAGTTAAGGTGGACGGAAGCCGCGAAGGTGGAGG
GGGGAGTACCCTGGCATGCGGTGGTGCTGCAGGGAGCTGAGAGGTTCATG
ACCTCCTGGCACGAGAAGGAAGAAGAGGCCAGCCGACAACGAGCGCTCAA
ACGAAACCACAAGCCAACAACCAATGGGGCGGGGGGGGGGCAGGAGACGG
ACGAGACGGCGAGGGAAGAAAGCAAACGAGAAGAGACGGACCGAGTGGCA
CGATACGTGCCGGATTGA

Synonyms

The feature 'Ec-27_006800.2' has the following synonyms


Synonym
Esi241_0058
Esi_241_0058