Ec-27_006530.2 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-27_006530.2
Unique NameEc-27_006530.2
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length107
Homology
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BLAST of Ec-27_006530.2 vs. uniprot
Match: D8LAS6_ECTSI (Flavin_Reduct domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LAS6_ECTSI)

HSP 1 Score: 271 bits (693), Expect = 3.990e-84
Identity = 161/224 (71.88%), Postives = 165/224 (73.66%), Query Frame = 2 
Query:   26 MMTTARRDWHAAVNAFVLLVLLGTFGEAFVAQSVAPSSSSSSRSTSERHRSSSRCHDPTGASSPNRGSTSSTGRSGSVSFLRATEGEAGDRALPSLTKHHAPPASACRFSALQL*TRTGRRT*TSSPTLRRWVSSRNDCGWYPCSRHFELRKLRSRRLGCDAA--LATKSRPARADTRQSGGRDTDKAGRCAEQAFPWDEPSCMNVAIIPGCGSYVTLHMVSKQ 691
            MMTTARRDWHAAVNAFVLLVLLGTFGEAFVAQSVAPSSSSSSRSTSERHRSSSRCHDPTGASSPNRGSTSSTGRSGSVSFLRATEGEAGDRALPSLTKHHAPPA +    +L      G  T  +  T    V    +  W        L      R G      L     P      QSGGRDTDKAGRCAEQAFPWDEPSCMNVAIIPGCGSYVTLHMVSKQ
Sbjct:    1 MMTTARRDWHAAVNAFVLLVLLGTFGEAFVAQSVAPSSSSSSRSTSERHRSSSRCHDPTGASSPNRGSTSSTGRSGSVSFLRATEGEAGDRALPSLTKHHAPPALSVPVFSLATVNEDGS-TNMNIVTYASPVGIEPERLWMVSLFKSTLSYENFVREGWGVMQLLQRNHAPLVPILGQSGGRDTDKAGRCAEQAFPWDEPSCMNVAIIPGCGSYVTLHMVSKQ 223
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BLAST of Ec-27_006530.2 vs. uniprot
Match: A0A7S2RNZ4_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RNZ4_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 4.350e-11
Identity = 51/195 (26.15%), Postives = 87/195 (44.62%), Query Frame = 1 
Query:  337 VSVPVFSLATVNEDGSTNMNIVTYASPVGIEPERLWMVSLFKAL*ATKTSFEKAG-----V*CSSCNEITPRSCRY*AERREGHGQGGKMRGT-GVSVGRAIMHERCHYPWL--------------------------WFLRHAAHGQQTAAGDHDAIICRIGNIFGPDEA-----ASSRLEVLESGHLRKAGII 810
            + VP ++LATV  DG+TNMNI+TYA+P+ I P+R+W + LFK    +  +F++ G     +   S +++ P                  + GT G  V +    E+ ++PW+                          + +     G+   AG HD  +C++  +F  D+      AS++   L +  LR+ GII
Sbjct:   31 IDVPTYALATVCRDGTTNMNILTYATPISIRPDRIWSIGLFKGT-LSHENFQRTGRAILQLLDESHSKLVP-----------------SLGGTCGRDVDKRAESEKLNFPWVKLPNSSENDEKDELQQQPLVLPGCPHYIVLSLVDGKLIDAGSHDVALCKVDEMFVSDDCELDDTASTKASYLSTNRLREKGII 207
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BLAST of Ec-27_006530.2 vs. uniprot
Match: A0A7S0HHD5_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HHD5_9EUKA)

HSP 1 Score: 72.4 bits (176), Expect = 5.660e-11
Identity = 53/166 (31.93%), Postives = 82/166 (49.40%), Query Frame = 1 
Query:  337 VSVPVFSLATVNEDGSTNMNIVTYASPVGIEPERLWMVSLFKAL*ATKTSFEK--AGV*CSSCNEITPRSCRY*AERREGHG----QGGKMRGTGVSVGRAIMHERCHYPWLWFLRHAAHGQQTAAGDHDAIICRIGNIFGPDEA--ASSRLEVLESGHLRKAGII 810
            +S PVFSLAT+  DG T+MN++TYA+P+ + PERLW +SLF+    +  ++++   GV      E  P +           G        + G   S G     E+     L ++R    G+   AG H+  IC++   FG  EA   ++R   L +  LR+AG+I
Sbjct:   28 LSSPVFSLATLGADGRTSMNMLTYATPISVRPERLWAISLFRDT-QSHANWQRRGTGVLQQLSAEHAPLTSALGGTSSADEGVDKAAACAVLGWEWSEGGECGEEQLLPGCLTYVRLVQQGELIDAGGHEVAICKLERTFGQAEADEPAARGLALSTAELRRAGLI 192
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BLAST of Ec-27_006530.2 vs. uniprot
Match: A0A7S2E2S7_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2E2S7_9EUKA)

HSP 1 Score: 72.4 bits (176), Expect = 1.060e-10
Identity = 60/195 (30.77%), Postives = 91/195 (46.67%), Query Frame = 1 
Query:  292 GSCAAELDEAPRTSCVSVPVFSLATVNEDGSTNMNIVTYASPVGIEPERLWMVSLFKAL*ATKTSF--EKAGV*CSSCNEITPRSCRY*AERREGHGQGGKMRGTGVSVGRAIMHERCHYPWL-----W---------------FLRHAAHGQQTAAGDHDAIICRIGNIFGPDEAASSRLEVLESGHLRKAGII 810
            G+ A    EAP    ++ PVFSL+T+N DG+TNM I+TYA+PVGI P+R W VSL++    T  +F  +++G+    C    P +    A        GGK   +G    +A       + W+     W               +LR +  G+    G+HD  IC + ++ G       R   L + HLR+ G+I
Sbjct:   41 GATALMPTEAPPL--LNSPVFSLSTLNADGTTNMQILTYATPVGIGPKRTWGVSLYRPT-LTHANFCKQRSGILQVLCE---PHAAIVFA-------LGGK---SGNDSDKAAACAAAGFEWIKPPESWGGPTRSPLLLPGCSRYLRLSQVGELQPCGEHDLAICAVEDMLGLPPEDELRAVALSTAHLRELGLI 219
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BLAST of Ec-27_006530.2 vs. uniprot
Match: A0A7S4PWJ3_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4PWJ3_9DINO)

HSP 1 Score: 72.4 bits (176), Expect = 1.850e-10
Identity = 52/147 (35.37%), Postives = 73/147 (49.66%), Query Frame = 1 
Query:  337 VSVPVFSLATVNEDGSTNMNIVTYASPVGIEPERLWMVSLFKAL*ATKTSFEK-AGV*CSSCNEITPRSCRY*AERREGHG----QGGKMRG------TGVSVGRAIMHERCHYPWLWFLRHAAHGQQTAAGDHDAIICRIGNIFGP 744
            ++VPV+SLAT++  G TNMNI+TYASPVGI P R W +SL++   + +   E+ +GV         P       +  E  G    +G +  G       GV     ++  RC      +LR    G+ T AGDHD  ICR+  I  P
Sbjct:   87 LNVPVYSLATLDSTGKTNMNILTYASPVGIRPARAWCISLYRKTQSHRNFIERRSGVLQLLGESHAPLVYLLGGQSSEDAGVDKAEGCRAEGFEWVSQEGVEE---MLLPRCRA----YLRLVLEGEVTDAGDHDVAICRLDQILYP 226
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BLAST of Ec-27_006530.2 vs. uniprot
Match: A0A8J2SL81_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SL81_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 5.010e-10
Identity = 60/186 (32.26%), Postives = 88/186 (47.31%), Query Frame = 1 
Query:  307 ELDE-APRTSC--VSVPVFSLATVNEDGSTNMNIVTYASPVGIEPERLWMVSLFKAL*ATKTSF--EKAGV*CSSCNEITPRSCRY*AERREGHGQGGKMRGTGVSVGRAIMHERCHYPWLWFLRHAAHGQQTAAGDHDAIICRI-GNIFGPDEAASSRLEVLESGHLRKAGII*LANSNGGMGDV 846
            E DE  PRT    +  PV+SLAT++E G TNMN+VTYA+PVGI PER W +SLFK+   ++ +F   + GV      E  P              +     G G +   +   ER       ++   A G+    GDH+  +CR+   + G D + ++      +G LR+ G+I         GDV
Sbjct:   47 EYDEPVPRTVAPLLDGPVYSLATLDEAGDTNMNVVTYATPVGIRPERRWALSLFKST-VSRANFARRRRGVLQLLRPEHAPLVYALGGTSAADADKAAACYGAGFAWESSDWDERVLPRCAAYVSLEAVGEPVDCGDHEVYVCRVVDGVAGFDASHAT------TGDLRERGLITTEGRARAPGDV 225
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BLAST of Ec-27_006530.2 vs. uniprot
Match: A0A7S4NG52_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4NG52_9EUKA)

HSP 1 Score: 65.9 bits (159), Expect = 1.030e-8
Identity = 53/164 (32.32%), Postives = 73/164 (44.51%), Query Frame = 1 
Query:  346 PVFSLATVNEDGSTNMNIVTYASPVGIEPERLWMVSLFKAL*ATKTSFEKAGV*CSSCNEITP--RSCRY*AERREGHGQGGKM------RGTGVSVGRAIMHERCHYP-WLWFLRHAAHGQQTAAGDHDAIICRIGNIFGPDEAASSRLEVLESGHLRKAGII 810
            PVF+LATV+  G+TNMNI+TYA+PVGI P R W++SLF+     KT  E  G  C     +    R C        G      +      R  G    R   H+    P    + R    G  T AG+HD  +C +  +F PD         L++   R  G++
Sbjct:   30 PVFALATVDATGATNMNILTYATPVGIGPRR-WVISLFR-----KT--ETHGNFCRRRTGVLQLLRPCHAALVHTLGGSSARDVDKETACRELGFEWARFDGHDELLLPDCAAYYRLTLDGDVTNAGEHDVALCLLDGVFVPDADVGPADAALDTRECRALGLV 185
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BLAST of Ec-27_006530.2 vs. uniprot
Match: A0A7S3STA6_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3STA6_9SPIT)

HSP 1 Score: 60.8 bits (146), Expect = 1.080e-7
Identity = 28/54 (51.85%), Postives = 38/54 (70.37%), Query Frame = 1 
Query:  301 AAELDEAPRTSCVSVPVFSLATVNEDGSTNMNIVTYASPVGIEPERLWMVSLFK 462
            A EL        ++ PVFSLAT++  G  NMN++TYA+PVGI P RLW++SLF+
Sbjct:    9 ALELTRLDAPPVLTSPVFSLATLDAKGEPNMNLLTYATPVGIRPHRLWVISLFR 62
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BLAST of Ec-27_006530.2 vs. uniprot
Match: A0A5J4Z1F6_PORPP (Flavin_Reduct domain-containing protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z1F6_PORPP)

HSP 1 Score: 62.4 bits (150), Expect = 2.870e-7
Identity = 28/37 (75.68%), Postives = 32/37 (86.49%), Query Frame = 1 
Query:  349 VFSLATVNEDGSTNMNIVTYASPVGIEPERLWMVSLF 459
            VFSLAT+N DGSTNMNIVTY +PV I P+RLW +SLF
Sbjct:   68 VFSLATLNRDGSTNMNIVTYVTPVSIHPQRLWALSLF 104
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BLAST of Ec-27_006530.2 vs. uniprot
Match: A0A7S3K2W7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K2W7_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 3.140e-7
Identity = 26/39 (66.67%), Postives = 35/39 (89.74%), Query Frame = 1 
Query:  346 PVFSLATVNEDGSTNMNIVTYASPVGIEPERLWMVSLFK 462
            P +S +T++EDG+TNMNIVTYASP+GI PER+W VSL++
Sbjct:   65 PCYSFSTIDEDGNTNMNIVTYASPIGIRPERVWAVSLYR 103
The following BLAST results are available for this feature:
BLAST of Ec-27_006530.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
D8LAS6_ECTSI3.990e-8471.88Flavin_Reduct domain-containing protein n=2 Tax=Ec... [more]
A0A7S2RNZ4_9STRA4.350e-1126.15Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S0HHD5_9EUKA5.660e-1131.93Hypothetical protein (Fragment) n=1 Tax=Phaeocysti... [more]
A0A7S2E2S7_9EUKA1.060e-1030.77Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
A0A7S4PWJ3_9DINO1.850e-1035.37Hypothetical protein n=1 Tax=Alexandrium monilatum... [more]
A0A8J2SL81_9STRA5.010e-1032.26Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S4NG52_9EUKA1.030e-832.32Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]
A0A7S3STA6_9SPIT1.080e-751.85Hypothetical protein (Fragment) n=1 Tax=Strombidin... [more]
A0A5J4Z1F6_PORPP2.870e-775.68Flavin_Reduct domain-containing protein n=1 Tax=Po... [more]
A0A7S3K2W7_9STRA3.140e-766.67Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_27contigchr_27:6011599..6015744 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Length1655
Hectar predicted targeting categoryother localisation
Gene idEc-27_006530.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-27_006530Ec-27_006530Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_27 6011599..6015744 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_006530.2Ec-27_006530.2Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_27 6014929..6015249 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_006530.2.1Ec-27_006530.2.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 6011599..6011936 +
Ec-27_006530.2.2Ec-27_006530.2.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 6012534..6012659 +
Ec-27_006530.2.3Ec-27_006530.2.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 6013228..6013318 +
Ec-27_006530.2.4Ec-27_006530.2.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 6013672..6013811 +
Ec-27_006530.2.5Ec-27_006530.2.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 6014785..6015744 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_0065305UTR:Ec-27_006530.2Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_27 6011599..6011936 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_006530.2CDS:Ec-27_006530.2Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_27 6014929..6015249 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_0065303UTR:Ec-27_006530.2Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_27 6015250..6015744 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-27_006530.2 ID=Ec-27_006530.2|Name=Ec-27_006530.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=107bp
MGDVYCSQICYEVRDTQRCVRNVSVVNGTGVSRVWELKARVAARTLVDVR
LLFSLVKMCLMGILISNLCLIIEMMIHCSLLRRQALPIVGSSVSLAFPRH
SQPMYL*
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spliced messenger RNA

>Ec-27_006530.2 ID=Ec-27_006530.2|Name=Ec-27_006530.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1655bp|location=Sequence derived from alignment at chr_27:6011599..6015744+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGGAGAGTGCTCGCTGGTTGCTGTCATGATGACCACGGCAAGACGAGAT
TGGCATGCTGCGGTCAACGCGTTCGTTCTTTTGGTCTTACTGGGAACGTT
CGGAGAAGCATTCGTCGCTCAGTCTGTGGCACCATCGTCATCATCGTCAT
CGCGATCGACTTCGGAGAGACACCGCAGCAGCAGCAGATGTCATGATCCA
ACAGGAGCCAGCAGTCCAAACCGAGGCAGTACGAGCAGCACCGGTAGGAG
CGGTAGCGTCTCCTTCCTTCGAGCTACTGAGGGAGAAGCAGGGGATCGTG
CGCTGCCGAGCTTGACGAAGCACCACGCACCTCCTGCGCTCAGCGTGCCG
GTTTTCAGCCTTGCAACTGTGAACGAGGACGGGTCGACGAACATGAACAT
CGTCACCTACGCTTCGCCGGTGGGTATCGAGCCGGAACGACTGTGGATGG
TATCCTTGTTCAAGAGCACTTTGAGCTACGAAAACTTCGTTCGAGAAGGC
TGGGGTGTGATGCAGCTCTTGCAACGAAATCACGCCCCGCTCGTGCCGAT
ACTAGGGCAGAGCGGCGGGAGGGACACGGACAAGGCGGGAAGATGCGCGG
AACAGGCGTTTCCGTGGGACGAGCCATCATGCATGAACGTTGCCATTATC
CCTGGCTGTGGTTCCTACGTCACGCTGCACATGGTCAGCAAACAGTCTGC
AGGAGATCATGACGCCATAATCTGCCGAATTGGGAACATTTTCGGACCTG
ATGAAGCCGCAAGTTCGCGGTTGGAGGTTCTGGAATCGGGACATCTCCGC
AAAGCTGGAATAATTTGATTGGCCAATTCAAATGGCGGCATGGGTGACGT
GTACTGCTCACAAATTTGCTACGAAGTACGAGATACCCAGCGGTGTGTGC
GGAATGTGTCTGTGGTCAATGGCACCGGGGTTTCGCGAGTTTGGGAGCTG
AAGGCACGGGTTGCCGCTCGAACACTTGTAGATGTAAGGCTATTGTTTAG
TCTGGTAAAGATGTGTCTAATGGGAATATTGATTTCCAACCTCTGTCTTA
TAATCGAAATGATGATTCATTGTTCGTTACTACGGAGACAAGCGCTTCCT
ATCGTCGGAAGCAGTGTTTCACTAGCTTTCCCACGCCACAGCCAGCCCAT
GTACTTATGAAGGTGCATCTCGAGCCGAAAGCATGCACGTGACTTAGACC
CATCCACACCGTCGTTGACGCTAGCTAGTTCAGAAATAGGTGCAACGAGG
AATTGTGCACTCTTCACACAAAGGCAACCTGTGCACGGATGGCTGTCGAA
TAGTACGCATAGCTCCGAGTCGTCGGGAGTGGTTACGTGGCGTTTCTCTT
CATATTGGGACCACCCCGCAACCTGGGTTTCTGCACGCGGGGTTGCTTCT
TCACGGAAAATCAGCGAGCTTGAAAGTGCATCGACGGCGGTACTTGGACG
AGGACGCCGGCAACGAGTTAACGTTGCTACGCCAAAGACCATACAGCAGT
AGTAGTGGAGACAGGTGGTGAGGATTTTGTAGGGACGGTAGTTTTGTCGA
AGCACGAAGTGTCGCGGCCGTTTCAGCGCGACAGCATGTCTACATCATCC
TTTATTTCGTGGCAAGGAGTTCTCACCGAGCGCCATAACGCCACGAATCA
CTCTT
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protein sequence of Ec-27_006530.2

>Ec-27_006530.2 ID=Ec-27_006530.2|Name=Ec-27_006530.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=107bp
MGDVYCSQICYEVRDTQRCVRNVSVVNGTGVSRVWELKARVAARTLVDVR
LLFSLVKMCLMGILISNLCLIIEMMIHCSLLRRQALPIVGSSVSLAFPRH
SQPMYL*
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mRNA from alignment at chr_27:6011599..6015744+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-27_006530.2 ID=Ec-27_006530.2|Name=Ec-27_006530.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=4146bp|location=Sequence derived from alignment at chr_27:6011599..6015744+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGAGAGTGCTCGCTGGTTGCTGTCATGATGACCACGGCAAGACGAGAT
TGGCATGCTGCGGTCAACGCGTTCGTTCTTTTGGTCTTACTGGGAACGTT
CGGAGAAGCATTCGTCGCTCAGTCTGTGGCACCATCGTCATCATCGTCAT
CGCGATCGACTTCGGAGAGACACCGCAGCAGCAGCAGATGTCATGATCCA
ACAGGAGCCAGCAGTCCAAACCGAGGCAGTACGAGCAGCACCGGTAGGAG
CGGTAGCGTCTCCTTCCTTCGAGCTACTGAGGGAGAAGCAGGGGATCGTG
CGCTGCCGAGCTTGACGAAGCACCACGCACCTCCTGCGGTAAGCACAAGA
GCCGTGTCGCCATTGCCTGTCTTGAGCAATCTCTATCTAAGACAAGGCCA
AGCGTGGTGCGCACTCGGTGGCCGCGGGAATATGTTCCCATCGTTTGATA
GATAGTGTCCCATTGGATGGGCAAGAGAGGGGAAGAAGGAGGGGGTGGGT
GGGAAAACATACGCATAAGGATCATGTTGATGCTGAGAGACGGCGGATCT
TGTTGTTGTGGATCGACATGTAGTCTCTTCACCTGCCTTTCACACGACCC
GCCCTGCTTGCTGCACGAGATAACTTCGAATGTTACAGCCGTTCTACAGA
GAGCGCTGGCGGTCCGTTACATGGGGGAGTTCGACTAGTTGCTTCTTGTG
AAAGCACTTCCACATCCTGCTGCTGCAGCAGGTAGACGAGGCCACCTTCT
AATACGCCACGCCACGCAAACACTTGCTCCCTCCGTATAGGTTGCTGAAC
TGTAGGCGCCACCAACAGCTCCAGCCTGGTTTGCTTTGCCCTCGGTTTTC
ATGGCAACGCTGTTCAACGCATGCACATGGCACCTCCCTCCTTTTCGCCT
GTGGCCGCCGCCGATTGCAAAACATACAAAAACAGCTCAGCGTGCCGGTT
TTCAGCCTTGCAACTGTGAACGAGGACGGGTCGACGAACATGAACATCGT
CACCTACGCTTCGCCGGTGGGTATCGAGCCGGAACGACTGTGGATGGTAT
CCTTGTTCAAGGTGTGGACGGTATATATGTCAAGTTCGTGTGGCGCACAA
CCTGGTTACTTGCTGCCGGTGTTCTTTTGCGAACGAACGCGGTGCTCTCG
ACGTCGGAAGATGGCCCTTTTGTAGCACCACCTGGTGCACCATCTTGGAT
TCGCTAGGTTTGGCGGTTGGCCTTGATTTTGGCATGCTTTACGGTTTGTT
TTCTTCCCATCTCTAGAGATGTTCGCATGCTTCGATTCGACGGTTTGGAC
GTGGGTCCCGGCCCACCGAAGCCGCATCTACTCCTCCGTGAGGTGAACGT
CGATCCCTTCATTGCTCTTCGATATTTCGCGTGACAACATGCCCCAGTGG
TATGATGCGGCTGTTGCTGTCAGGTCGAAACCAAGGCTCTTATCTCCAAC
AGAGACTTATTCCCGCCGCGGTGCAATGATTGAATGGGTGTATACATACG
CAAGCAGCGGAAGTTCTCGCCGTAAGACTCTAGTCGTGGCTCGATCATCC
TTCCTGTCGTCGCTGAAACGCTGCTGCTCGCGTTCTTGCCGGCAACCACT
GTTTTCTCTTTCCCGACGACTGTCTCAAGAGCACTTTGAGCTACGAAAAC
TTCGTTCGAGAAGGCTGGGGTGTGATGCAGCTCTTGCAACGAAATCACGC
CCCGCTCGTGCCGATACTAGGTGAGGACCTTGAAGGCATTTGATCAGTTG
AGAACCCCAAGGGTCAACCGCTGTTTACCCAAGCCCAAGAACACGTCCCC
ACTTCAGGGCCCGGTTATTTTTCTCACTTTGGTGAGCTCTTGAGGAGAGG
TGGCGTGCGAACATGTTGAGAGTCTACCGGCTTAATGACATACGTGTAGT
GGCCCGCAGTGGCCAGGTAGAGAGGGGCCGGGTTTCAAGGTAGGCGTCCG
CAGTAAAAAGTCCTTCACCATGCTGCTACCAGGTTCCGAACGTTTATCCA
ATCAGACTCGTTCCGAAAACTCTCTTCCGTACACCATGTTTTCTTTGCTT
CTCTGGTGGTATGAGTATTCCAGGGCAGAGCGGCGGGAGGGACACGGACA
AGGCGGGAAGATGCGCGGAACAGGCGTTTCCGTGGGACGAGCCATCATGC
ATGAACGTTGCCATTATCCCTGGCTGTGGTTCCTACGTCACGCTGCACAT
GGTCAGCAAACAGGTGGGGCAATAGTAGCCTTCGCGCCATGGCTTTCACA
GCTTGGCGAACAAAAAGTGAAGCAGCAGTCGCACCACCTGCAGCCATATT
CATGGCTTTCCTGTCTCAAAACGTACCCTCACACGCGGGCAAGTGTACGT
CAGATCCACAGAACGATCACTCACGACCCCCGGGTTCAATGGAGGCGAGG
TATGCGGTACGTCAAGAGACTCGCCCTGGGCAGGGGTACCGGAGAAAGGA
AGGCCTGGCGGGTAAACCGTGGTATTTTGCTGGATACTGTCGAGCTCGAC
CACATGAATCCATACCGTTTCTCTCACAGCGGTCTTATCGATCTCCAAAC
TATTCGTATAATTACTTCGCGTTGTAGGCTAGGGCCTATGACGTGGATTT
CAGATCGTCCCACTTTCGATCGGGTTCACCAACTACTACAGGAAGCACTG
TACCGGATGCAAACGCTACGATATTTTCCGCAAACCTAGAGTTATACCTG
CGCCCACCCACCCCCACCCTCACTCTTTGGCTTCAGTAGTGAACGACTTG
GTACCGCAGTATCCACGTGCTCGCCACCCTTTCCTCTTGCGTACAGGCGG
GCTTCCTATAAACGAGAACCGACCTCGTTCTCTGAAGTCAGCGATGAAAT
GTGCGACTCTGGCCTACCTTTAACCATTGTCCTCTTCGCTCTATGTTGGC
GAACTTGCGGTCTTCAACAAGAAAACGTAGCTTGTTGTCTAGCGCAGTTT
CTTTTTTCGCCGCCACCATCGAGGATAGTGTAGGGTCTACCGCTGAGCGA
CGGGGGTCTTTCTTTCCCAAAGCTATTTTTGGGAACATCTGAGCCTTTCT
CTAACAGAGTTGTTCGTAGTCGCGGATCGCAACCAGCTGCTGTGCTTCCT
ACAGTTCCACAGGTCAGGAAGAGGAGAGAACGGAAACCATGCTCCCTCTC
TCGCAACCCGGTGTTTTTGTTTGATCTCACACCCAGTCTGCAGGAGATCA
TGACGCCATAATCTGCCGAATTGGGAACATTTTCGGACCTGATGAAGCCG
CAAGTTCGCGGTTGGAGGTTCTGGAATCGGGACATCTCCGCAAAGCTGGA
ATAATTTGATTGGCCAATTCAAATGGCGGCATGGGTGACGTGTACTGCTC
ACAAATTTGCTACGAAGTACGAGATACCCAGCGGTGTGTGCGGAATGTGT
CTGTGGTCAATGGCACCGGGGTTTCGCGAGTTTGGGAGCTGAAGGCACGG
GTTGCCGCTCGAACACTTGTAGATGTAAGGCTATTGTTTAGTCTGGTAAA
GATGTGTCTAATGGGAATATTGATTTCCAACCTCTGTCTTATAATCGAAA
TGATGATTCATTGTTCGTTACTACGGAGACAAGCGCTTCCTATCGTCGGA
AGCAGTGTTTCACTAGCTTTCCCACGCCACAGCCAGCCCATGTACTTATG
AAGGTGCATCTCGAGCCGAAAGCATGCACGTGACTTAGACCCATCCACAC
CGTCGTTGACGCTAGCTAGTTCAGAAATAGGTGCAACGAGGAATTGTGCA
CTCTTCACACAAAGGCAACCTGTGCACGGATGGCTGTCGAATAGTACGCA
TAGCTCCGAGTCGTCGGGAGTGGTTACGTGGCGTTTCTCTTCATATTGGG
ACCACCCCGCAACCTGGGTTTCTGCACGCGGGGTTGCTTCTTCACGGAAA
ATCAGCGAGCTTGAAAGTGCATCGACGGCGGTACTTGGACGAGGACGCCG
GCAACGAGTTAACGTTGCTACGCCAAAGACCATACAGCAGTAGTAGTGGA
GACAGGTGGTGAGGATTTTGTAGGGACGGTAGTTTTGTCGAAGCACGAAG
TGTCGCGGCCGTTTCAGCGCGACAGCATGTCTACATCATCCTTTATTTCG
TGGCAAGGAGTTCTCACCGAGCGCCATAACGCCACGAATCACTCTT
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Coding sequence (CDS) from alignment at chr_27:6011599..6015744+

>Ec-27_006530.2 ID=Ec-27_006530.2|Name=Ec-27_006530.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=321bp|location=Sequence derived from alignment at chr_27:6011599..6015744+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGGTGACGTGTACTGCTCACAAATTTGCTACGAAGTACGAGATACCCA
GCGGTGTGTGCGGAATGTGTCTGTGGTCAATGGCACCGGGGTTTCGCGAG
TTTGGGAGCTGAAGGCACGGGTTGCCGCTCGAACACTTGTAGATGTAAGG
CTATTGTTTAGTCTGGTAAAGATGTGTCTAATGGGAATATTGATTTCCAA
CCTCTGTCTTATAATCGAAATGATGATTCATTGTTCGTTACTACGGAGAC
AAGCGCTTCCTATCGTCGGAAGCAGTGTTTCACTAGCTTTCCCACGCCAC
AGCCAGCCCATGTACTTATGA
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Synonyms
The feature 'Ec-27_006530.2' has the following synonyms
Synonym
Esi0000_0005
Esi_0000_0005