Ec-27_006450.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-27_006450.1
Unique NameEc-27_006450.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length234
Homology
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BLAST of Ec-27_006450.1 vs. uniprot
Match: D8LAT3_ECTSI (Bile Acid:Na+ symporter family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAT3_ECTSI)

HSP 1 Score: 456 bits (1174), Expect = 3.070e-162
Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 1 
Query:    1 MLLAGTAVLPLIVPVLLVWPPGGMASTSKSYEKARASVEKATGHFADVQTISAKDVLRLEQEGKKVLLVDVRTEDEMKVSMLRGALTREEFENSSLGEAARTGKKFRERSGEGEEAWGVVAPYCTVGFRSGQYAKKLVDLGYPSVRNSEGVVLWTHDVGNGLVARAADEVESGGSPGSGPRNGSGVEVKRLHVFGSPWDHASDDFETIKFTATGWFGSTVKSAFSKMFKKKKT 699
            MLLAGTAVLPLIVPVLLVWPPGGMASTSKSYEKARASVEKATGHFADVQTISAKDVLRLEQEGKKVLLVDVRTEDEMKVSMLRGALTREEFENSSLGEAARTGKKFRERSGEGEEAWGVVAPYCTVGFRSGQYAKKLVDLGYPSVRNSEGVVLWTHDVGNGLVARAADEVESGGSPGSGPRNGSGVEVKRLHVFGSPWDHASDDFETIKFTATGWFGSTVKSAFSKMFKKKKT
Sbjct:    1 MLLAGTAVLPLIVPVLLVWPPGGMASTSKSYEKARASVEKATGHFADVQTISAKDVLRLEQEGKKVLLVDVRTEDEMKVSMLRGALTREEFENSSLGEAARTGKKFRERSGEGEEAWGVVAPYCTVGFRSGQYAKKLVDLGYPSVRNSEGVVLWTHDVGNGLVARAADEVESGGSPGSGPRNGSGVEVKRLHVFGSPWDHASDDFETIKFTATGWFGSTVKSAFSKMFKKKKT 233
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BLAST of Ec-27_006450.1 vs. uniprot
Match: A0A836CAM6_9STRA (Bile Acid:Na+ symporter family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAM6_9STRA)

HSP 1 Score: 148 bits (374), Expect = 2.760e-41
Identity = 82/194 (42.27%), Postives = 108/194 (55.67%), Query Frame = 1 
Query:   91 YEKARASVEKATGHFADVQTISAKDVLRLEQEGKKVLLVDVRTEDEMKVSMLRGALTREEFENSSLGEAARTGKKFRERSGEGEEAWGVVAPYCTVGFRSGQYAKKLVDLGYPSVRNSEGVVLWTHDVGNGLVARAADEVESGGSPGSGPRNGSGVEVKRLHVFGSPWDHASDDFETIKFTATGWFGSTVKSAF 672
            Y KAR S    TG FAD+ T+SA +VLRL   G  VLLVDVR  +E  VSM+ GA++ +EFE+S            R++ G    A   V PYCT+G+RSG YA+KL  LGY  VRN EG+V+WTHD+G+GLV R                   G E K +H +G PWD  + D+ ++ F    W  S  + A+
Sbjct:    5 YTKARESCMHYTGEFADIATLSALEVLRLRTNGTPVLLVDVRLPEEQDVSMIEGAISLDEFESSHR----------RDQYGPAALANTTVVPYCTIGYRSGAYARKLKTLGYRHVRNGEGIVMWTHDIGSGLVDR------------------DGRETKYVHTYGPPWDLVASDYHSVHFGVWNWIQSHSRGAW 170
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BLAST of Ec-27_006450.1 vs. uniprot
Match: A0A6H5KXH1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXH1_9PHAE)

HSP 1 Score: 122 bits (307), Expect = 4.060e-32
Identity = 64/66 (96.97%), Postives = 66/66 (100.00%), Query Frame = 1 
Query:   70 MASTSKSYEKARASVEKATGHFADVQTISAKDVLRLEQEGKKVLLVDVRTEDEMKVSMLRGALTRE 267
            MASTSKSYEKARASVEKATGHFAD+QTISAKDVLRLEQEGKKVLLVDVRTEDEMKVSMLRGALTR+
Sbjct:    1 MASTSKSYEKARASVEKATGHFADIQTISAKDVLRLEQEGKKVLLVDVRTEDEMKVSMLRGALTRQ 66
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BLAST of Ec-27_006450.1 vs. uniprot
Match: R1D8G3_EMIHU (Rhodanese domain-containing protein n=3 Tax=Emiliania huxleyi TaxID=2903 RepID=R1D8G3_EMIHU)

HSP 1 Score: 101 bits (252), Expect = 3.280e-23
Identity = 70/206 (33.98%), Postives = 99/206 (48.06%), Query Frame = 1 
Query:   76 STSKSYEKARASVEKATGHFADVQTISAKDVLRLEQEGKKVLLVDVRTEDEMKVSMLRGALTREEFENSSLGEAARTGKKFRERSGEGEEAWGVVAPYCTVGFRSGQYAKKLVDLGYP-------SVRNSEGVVLWTHDVGNGLVARAADEVESGGSPGSGPRNGSGVEVKRLHVFGSPWDHASDDFETIKFTATGWFGSTVKSAF 672
            STS+  + A A +   T  FA +   SA DV+ ++Q G+ V+L+DVR+  E  VS L GAL +  F   +  E  R              A  V+ P+CT+GFRSG Y + +   G          VRN EGVVLW+HDVG  +                      G  V+ LHV+GS WD A+D F+T+ F   G   + ++ A+
Sbjct:    2 STSRR-DAALAELRARTAGFAGLPLASASDVISMQQGGRDVILIDVRSPPERAVSTLPGALDQHSFAALAREEPERV-------------AAAVLVPFCTIGFRSGLYCEWIRGGGLGMAASSELDVRNGEGVVLWSHDVGTFVQ--------------------DGAPVRSLHVYGSAWDLAADGFDTVTFGPAGHLSAALRVAW 173
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BLAST of Ec-27_006450.1 vs. uniprot
Match: A0A813CHA3_9DINO (Hypothetical protein (Fragment) n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A813CHA3_9DINO)

HSP 1 Score: 102 bits (253), Expect = 1.230e-22
Identity = 77/208 (37.02%), Postives = 118/208 (56.73%), Query Frame = 1 
Query:   79 TSKSYEKA-RASVEKAT--GHFADVQTISAKDVLRLEQEGKKVLLVDVRTEDEMKVSMLRGALTREEFENSSLGEAARTGKKFRERSGEGEEAWGVVAPYCTVGFRSGQYAKKLVDL-GYPSVRNSEGVVLWTHDVGNGLVARA---ADEVESGGSPGSGPRNGSGVE-VKRLHVFGSPWDHASDDFETIKFTATGWFGSTVKSAFSK 678
            T++S E A RA+ + A+  G       +   ++ +  ++G+ V+LVDVR ++EM VSM+ G++T+E FE+  L            R+ + +    +V PYCTVG+RSG YAK+L+D  G  +VRN EGV++WT D G+GLV  A   A  V    +  +G    S  + V R+HV+G PWD A++ + T  F+ TG     +K   SK
Sbjct:    3 TNRSREDALRAAADFASKAGSQQAAPLLPTTELRQRLEKGEDVVLVDVRCKEEMDVSMIPGSVTKEHFESQLLPGL---------RAADPQP---LVVPYCTVGYRSGVYAKELMDKHGLQNVRNGEGVIMWTFD-GSGLVRPASGVAGTVVGKAAEDAGEALTSAWQPVTRVHVYGKPWDMAAEGYTTEFFSQTGGAWRFLKQKCSK 197
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BLAST of Ec-27_006450.1 vs. uniprot
Match: A0A813HB18_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813HB18_POLGL)

HSP 1 Score: 100 bits (248), Expect = 1.430e-20
Identity = 73/220 (33.18%), Postives = 115/220 (52.27%), Query Frame = 1 
Query:   61 PGGMASTSKSYEKARASVEKATGHFADVQTISAKDVLRLEQEGKKVLLVDVRTEDEMKVSMLRGALTREEFENSSLGEAARTGKKFRERSGEGEEAWGVVAPYCTVGFRSGQYAKKLV-DLGYPSVRNSEGVVLWTHDVGNGLV-------ARAA---DEVESGGSPGSGPRNGSGV---------------EVKRLHVFGSPWDHASDDFETIKFTATG 642
            PG  A++    E+ARA  +K      +   I   ++     +G+ ++LVDVRT +EM+VSM+ GA+ ++ FE   L +     ++  ++      +  ++ PYCTVG+RSG Y ++LV + G+ +VRN EGV++WT D G+ LV       +RA     +V   GS G+ P +G                   V  +HV+G PWD A++ F TI FT  G
Sbjct:  206 PGEKANS----EEARAKADK------EGPLIETPELRERLAKGEDIILVDVRTPEEMQVSMIPGAVAKDLFEAEILPKLLEGRQQDGQQQAIDSLSSPLIVPYCTVGYRSGLYCRELVNEHGFSNVRNGEGVIMWTFD-GSVLVKPLPGAPSRAPALPPQVYGKGSEGAQPSSGEAAGLVSGGGTKTATAWQSVSEVHVYGKPWDMAAEGFTTIYFTPVG 414
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BLAST of Ec-27_006450.1 vs. uniprot
Match: A0A812UW94_9DINO (Hypothetical protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812UW94_9DINO)

HSP 1 Score: 98.2 bits (243), Expect = 7.940e-20
Identity = 68/195 (34.87%), Postives = 107/195 (54.87%), Query Frame = 1 
Query:   97 KARASVEKATGHFAD-------VQTISAKDVLRLEQEGKKVLLVDVRTEDEMKVSMLRGALTREEFENSSLGEAARTGKKFRERSGEGEEAWGVVAPYCTVGFRSGQYAKKLVDL-GYPSVRNSEGVVLWTHDVGNGLVARAADEV-----ESGGSPGSGPRNGSGVEVKRLHVFGSPWDHASDDFETIKFTATG 642
            ++R    +A G FA           +   ++ +  ++G+ V+LVDVR ++EM VSM+ G++T+E FE+  L            R+ + +    +V PYCTVG+RSG YAK+L++  G  +VRN EGV++WT D G+GLV  A         +S    G  P   +   V R+HV+G PWD A++ + T  F+ +G
Sbjct:  587 RSREDALRAAGDFASKAGSQQAAPLLPTAELRQRLEKGENVVLVDVRCKEEMDVSMIPGSVTKEHFESQLLPGL---------RAADPQP---LVVPYCTVGYRSGVYAKELMNKHGLQNVRNGEGVIMWTFD-GSGLVRPAPGAPGTVVGKSAEDAGEAPST-AWEPVTRVHVYGKPWDMAAEGYTTEFFSQSG 767
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BLAST of Ec-27_006450.1 vs. uniprot
Match: A0A812J6E8_9DINO (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812J6E8_9DINO)

HSP 1 Score: 86.7 bits (213), Expect = 7.000e-18
Identity = 59/144 (40.97%), Postives = 85/144 (59.03%), Query Frame = 1 
Query:  226 EMKVSMLRGALTREEFENSSLGEAARTGKKFRERSGEGEEAWGVVAPYCTVGFRSGQYAKKLVDL-GYPSVRNSEGVVLWTHDVGNGLVARA---ADEVESGGSPGSGPRNGSGVE-VKRLHVFGSPWDHASDDFETIKFTATG 642
            EM+VSM+ G++T+E FE+  L            R+ + +    +V PYCTVG+RSG YAK+L+D  G  +VRN EGV++WT D G+GLV  A   A  V    +  +G    S  + V R+HV+G PWD A++ + T  F+ TG
Sbjct:    1 EMEVSMIPGSVTKEHFESQLLPGL---------RAADPQP---LVVPYCTVGYRSGVYAKELMDKHGLQNVRNGEGVIMWTFD-GSGLVRPASGVAGTVVGKAAEDAGEALTSAWQPVTRVHVYGKPWDMAAEGYTTEFFSQTG 131
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BLAST of Ec-27_006450.1 vs. uniprot
Match: Q01GT9_OSTTA (Rhodanese-like domain n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=Q01GT9_OSTTA)

HSP 1 Score: 80.1 bits (196), Expect = 5.120e-15
Identity = 67/213 (31.46%), Postives = 100/213 (46.95%), Query Frame = 1 
Query:   76 STSKSYEKARASVEKATGHFADVQTISAKDVLRLEQE---GKKVLLVDVRTEDEMKVSMLRGALTREEFENSSLGEAARTGKKFRERSGEGEEAWGVVAPYCTVGFRSGQYAKKLV-------DLGYPSVRNSEGVVLWTHDVGNGLVARAADEVESGGSPGSGPRNGSGVEVKRLHVFGSPWDHASDDFETI--KFTATGWFGSTVKSAFSK 678
            S+S + E     +  A G   DVQTI+A+ VL    E   G++++LVDVR EDE  VS++ GA++ EE+E       ART     +              YCT+G+RSGQYA+K+        D+ + ++  S  +V +TH+ G  LV  A                 +G + KR+H FG  W   +D +E +  K    G  G   K  F +
Sbjct:    2 SSSSANEARTRELADAFGAKFDVQTITARSVLERRNERDDGRRMVLVDVRAEDERAVSVIEGAMSVEEYER------ARTTLGAHD-----------CVCYCTIGYRSGQYAEKMSKAKKADEDVEFLNLYGS--IVAYTHEGGE-LVDPA-----------------TGEKTKRVHTFGKEWSCVADGYEAVFYKSALVGGLGQMFKGLFKR 177
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BLAST of Ec-27_006450.1 vs. uniprot
Match: A0A812UEF0_9DINO (PPR4 protein (Fragment) n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812UEF0_9DINO)

HSP 1 Score: 83.6 bits (205), Expect = 7.030e-15
Identity = 50/119 (42.02%), Postives = 70/119 (58.82%), Query Frame = 1 
Query:  355 VVAPYCTVGFRSGQYAKKLVDL-GYPSVRNSEGVVLWTHDVGNGLVARAADEV----------ESGGSPGSGPRNGSGVEVKRLHVFGSPWDHASDDFETIKFTATGWFGSTVKSAFSK 678
            +V PYCTVG+RSG YAK+L+D  G  +VRN EGV++WT D G+GLV  A+  V          ++ G  G  P + +   V R+HV+G PWD A++ + T  F+ TG     +K   SK
Sbjct:  351 LVVPYCTVGYRSGVYAKELMDKHGLQNVRNGEGVIMWTFD-GSGLVRPASGAVGTVDSAQVVGKAAGDAGETPTS-AWQPVTRVHVYGKPWDMAAEGYTTEFFSQTGGAWRFLKQKCSK 467
The following BLAST results are available for this feature:
BLAST of Ec-27_006450.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LAT3_ECTSI3.070e-162100.00Bile Acid:Na+ symporter family n=1 Tax=Ectocarpus ... [more]
A0A836CAM6_9STRA2.760e-4142.27Bile Acid:Na+ symporter family n=1 Tax=Tribonema m... [more]
A0A6H5KXH1_9PHAE4.060e-3296.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
R1D8G3_EMIHU3.280e-2333.98Rhodanese domain-containing protein n=3 Tax=Emilia... [more]
A0A813CHA3_9DINO1.230e-2237.02Hypothetical protein (Fragment) n=2 Tax=Symbiodini... [more]
A0A813HB18_POLGL1.430e-2033.18Hypothetical protein n=2 Tax=Polarella glacialis T... [more]
A0A812UW94_9DINO7.940e-2034.87Hypothetical protein n=1 Tax=Symbiodinium natans T... [more]
A0A812J6E8_9DINO7.000e-1840.97Hypothetical protein (Fragment) n=1 Tax=Symbiodini... [more]
Q01GT9_OSTTA5.120e-1531.46Rhodanese-like domain n=2 Tax=Ostreococcus tauri T... [more]
A0A812UEF0_9DINO7.030e-1542.02PPR4 protein (Fragment) n=1 Tax=Symbiodinium sp. C... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_27contigchr_27:5952271..5956934 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score457.6
Seed ortholog evalue3.5e-126
Seed eggNOG ortholog2880.D8LAT3
Length702
Hectar predicted targeting categorysignal peptide
Gene idEc-27_006450.1
EggNOG OGs2E3Y9@1,2SAXP@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-27_006450Ec-27_006450Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_27 5952263..5957709 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_006450.1Ec-27_006450.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_27 5952271..5956934 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_006450.1.1Ec-27_006450.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5952271..5952390 +
Ec-27_006450.1.2Ec-27_006450.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5953699..5953765 +
Ec-27_006450.1.3Ec-27_006450.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5954101..5954176 +
Ec-27_006450.1.4Ec-27_006450.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5954840..5954998 +
Ec-27_006450.1.5Ec-27_006450.1.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5955283..5955421 +
Ec-27_006450.1.6Ec-27_006450.1.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5956193..5956275 +
Ec-27_006450.1.7Ec-27_006450.1.7Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5956877..5956934 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_006450.1CDS:Ec-27_006450.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_27 5952271..5952390 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-27_006450.1 ID=Ec-27_006450.1|Name=Ec-27_006450.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=234bp
MLLAGTAVLPLIVPVLLVWPPGGMASTSKSYEKARASVEKATGHFADVQT
ISAKDVLRLEQEGKKVLLVDVRTEDEMKVSMLRGALTREEFENSSLGEAA
RTGKKFRERSGEGEEAWGVVAPYCTVGFRSGQYAKKLVDLGYPSVRNSEG
VVLWTHDVGNGLVARAADEVESGGSPGSGPRNGSGVEVKRLHVFGSPWDH
ASDDFETIKFTATGWFGSTVKSAFSKMFKKKKT*
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spliced messenger RNA

>Ec-27_006450.1 ID=Ec-27_006450.1|Name=Ec-27_006450.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=702bp|location=Sequence derived from alignment at chr_27:5952271..5956934+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGCTGCTCGCTGGTACTGCCGTGCTGCCCCTCATTGTTCCTGTTCTTCT
TGTATGGCCACCCGGGGGCATGGCTTCGACGTCTAAGAGCTACGAGAAAG
CCAGGGCTAGCGTTGAAAAGGCAACGGGCCACTTCGCGGATGTCCAGACA
ATCTCGGCCAAAGACGTGCTACGGCTAGAACAAGAAGGGAAAAAGGTGCT
TCTGGTCGACGTTCGTACGGAGGACGAGATGAAGGTTTCCATGCTCCGAG
GCGCTCTTACCAGGGAAGAGTTCGAGAACAGCAGCCTGGGAGAGGCGGCC
AGGACCGGGAAAAAGTTCCGAGAACGTTCCGGGGAAGGCGAGGAGGCTTG
GGGTGTCGTGGCGCCGTACTGTACAGTTGGATTCCGTTCCGGCCAGTACG
CCAAGAAGCTCGTGGACTTGGGATACCCATCGGTCAGAAACAGTGAGGGA
GTCGTTCTGTGGACCCACGACGTCGGCAACGGCTTGGTTGCGCGTGCTGC
AGATGAGGTGGAATCCGGGGGTAGCCCAGGTAGCGGACCTCGGAACGGTT
CTGGTGTTGAGGTCAAGCGATTGCACGTGTTCGGGTCACCCTGGGACCAC
GCAAGCGACGACTTCGAGACGATCAAGTTCACCGCGACAGGATGGTTTGG
CTCGACAGTGAAATCTGCGTTCTCCAAGATGTTTAAGAAGAAAAAAACAT
GA
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protein sequence of Ec-27_006450.1

>Ec-27_006450.1 ID=Ec-27_006450.1|Name=Ec-27_006450.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=234bp
MLLAGTAVLPLIVPVLLVWPPGGMASTSKSYEKARASVEKATGHFADVQT
ISAKDVLRLEQEGKKVLLVDVRTEDEMKVSMLRGALTREEFENSSLGEAA
RTGKKFRERSGEGEEAWGVVAPYCTVGFRSGQYAKKLVDLGYPSVRNSEG
VVLWTHDVGNGLVARAADEVESGGSPGSGPRNGSGVEVKRLHVFGSPWDH
ASDDFETIKFTATGWFGSTVKSAFSKMFKKKKT*
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mRNA from alignment at chr_27:5952271..5956934+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-27_006450.1 ID=Ec-27_006450.1|Name=Ec-27_006450.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=4664bp|location=Sequence derived from alignment at chr_27:5952271..5956934+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGCTGCTCGCTGGTACTGCCGTGCTGCCCCTCATTGTTCCTGTTCTTCT
TGTATGGCCACCCGGGGGCATGGCTTCGACGTCTAAGAGCTACGAGAAAG
CCAGGGCTAGCGTTGAAAAGGTGTGCGTGACGCGTGACGTGCCCGCATCG
TCCGAGATGCGGCACAGTCTATTCATAATAATAGTGCCTGATTCAAGTTG
TGTAACCTTTGTTTGCTTCGGTCAAGGTCTCTCGTGTCAACACGCAGCGC
CGAGCCGAAATTTTTTTGGGGTATAGCTTCAATTTCGGGGAGACCATTCC
CTTGGCATGACCTCTTCGTCCACGGTCTCCTGCCGCAATGAAGAAAAAAT
TGTGCGATATGGCAACGAAGCGCAGAGTCCACTTTGATGGTGCGGAGCAA
ACCCTACAGCAAGGTGGGCCTGTAAATGCACCATTCTGTCATCACGCTAA
AGCGTATGTCGTATAAAGCGTATGTCGTATGTAGGTTGGACGGGTCTGTC
GGCTCCCGAATGTCGCAGATGCCAGTCGCCCAATGGGGGAAAGGTTCTAC
AAGTTGGTGTAAGACCAGTGTCACGCAAGGAGTGTGGATCTCAACGTATT
TAGGTTGTAGCTGTCATTCAGCAGAGTGAAGATTAAGATTCGTTCTGTAA
AAGTTCGCTGTTGACTGCTACATACATAAATGGATTATTGCTAGAGGTGA
GAAGGATCATGGCTAGACTAGAGAGAAGAGACCAGTTTTTTTTTTCGGAA
GAATTTTTTTCTCCTCAATGGATTGATGTACGCGACCCGCGTCGATCCTC
CTCCTACTGCTGTAAGTACTCAAGTAATTTTTGCGTCATAACGAGATATT
TACACGCTTGTCCCGACCACATGATTTCATGATCACAGCACAAGCTACCA
GCTGAATACGAGAGGGCCTTGACGAAAAATCGTGGCAAGCATATATCTGG
GTTCCTCCATCATATACCATTAGCTCAGCCCCACAGCCACTCGCTGTAGA
CACTAGGTTTCCGTGGTGTTGCAACACCGTCTTGATTGAGGCAACGGCTG
GTAGGAGTGTTGACTACTGCTGTCGATGGACGGCTCGCTGGGGTTGACGT
GCGGTGTGCTAGATTGAGGGCGAAGGCACGAGAGCGAAGGCACGAGATCG
CGGCGGGCTTGCACCAGAGTGATGGAAAGGAACACCCTCCGCGGGACTGT
GTGTCGTATCCAATCCATCGCGTATCAATTCGCCTAGTAGTTGTTACCGG
CGTTCGGCATATGCATATGCGAGTGTATTTTCTGTTGCGGCCTGTTCGAT
GGATGCCTCCGTGGCGTGCAACCAGTTTGTAAGCCTGGTCGACGTAGATC
TGTGTCGAGCTCATTTTCTGAGCTTCTCGTCTTGAACTTCGGCCTTTCGT
TCGGACATTGCCGTGCTTCTTTGTTTAGGCAACGGGCCACTTCGCGGATG
TCCAGACAATCTCGGCCAAAGACGTGCTACGGCTAGAACAAGAAGGTGAG
AGAGCGGTGCTATGGTTGATTGGCCTCAAGTGCTTCTAAATGGCAGCACC
ATGAGGCGCGCTCGGTTACGTACGTCCTTTGTCGTTGGCAGGCGGCCATC
CCGGTGAACGGTCTACAATAGTACTGCGCGAATGCTCTTCTTTTTCGTCC
CACCTTTCGGCGTCGACTTCACGAATCGAGCGCAACATCAGGCAACGTCT
CCTGATAACCAATCTATACACGCAATTCCCTTCTGAACATGCTTGCGGTC
ATGACTGCCAAGCCTTGCACTCGCTCCTCGCTTCACGCGGTCCTTCGCCA
CGCATCGAAATGCTTCTAAACGCTTCCAAGGGAAAAAGGTGCTTCTGGTC
GACGTTCGTACGGAGGACGAGATGAAGGTTTCCATGCTCCGAGGCGCTCT
TACCAGGCAAGCCCCCCAGCCCTCTGCCACTACCTGCCTGCAAACACAGG
GTTGTTTTGGGCTCTACAATCGTTGGTCTTGTTGTCTTCTGTGCTAGTTC
CTTCACAAACCATACCGTATTGACCTCTCTATCCGCACGTCCTCTTCCAT
ACCGCGGAACTCGCCACCAATTCAAGAACCTGTTGAGCTGGGCAACCGTC
GGGGCTGGAGTCCAAGATCTTTGAATGTACAAAAAATACCCTCAAGTGAT
CTCAAAAAGTACCCTCAAGTGATTTTTTGGTCACGTGCTCTTCGTGCAAT
AACAATGAGCATTTGCAACAACTGAGAGGGTTCTGAGTGCAACGACTGCG
TCATCACGGACGAGGGCGCCCAGCATCGTCGTCCTCTACTTCTTGTGTTC
GCATGCTACCTGAAATTGCCGACAGGAAGTTGCGCCGCCTCTGTGTGTGT
CTGCTACGCACTCATGCGTTTCTTTTTTCTAGAAATCTACAATCAAAGAA
AGACTTAACCGTTCGAGAAAATACCACAGTCGAAGGGGGTGTGCTGACGT
CTTTTCAGCGAGTGGGGAAAAAATAGACGTGCGATCTGCTCGCTTCGCTC
CCCACCTCCCAGATCGCGGCAGGAGTAAGCCTGACATTGTACGCCCTTCT
CGTCTTGAGAAAAACACAGGGAAGAGTTCGAGAACAGCAGCCTGGGAGAG
GCGGCCAGGACCGGGAAAAAGTTCCGAGAACGTTCCGGGGAAGGCGAGGA
GGCTTGGGGTGTCGTGGCGCCGTACTGTACAGTTGGATTCCGTTCCGGCC
AGTACGCCAAGAAGCTCGTGGACTTGGGGTGCGTTAGTCCCGACGTACTG
TATGGCGTACACTATCCTACCCAACGTTTTTTCGGTAACATTGATCGGGA
GGCTGTGGTGGAATGTATCATGGGTTCTCCTACAAAGGGAAGTGGCACGC
GCATTCGTCTGGCCACCTTGCGAGCGACCGACCAAGCAGCGCATTCAAGA
TCGTCCACGCCTTTCGGCTGTGGCAAGTTACGTTGGGTGCCTCTTGTTGA
TGTTTTCTTTCAGCATCGCGTCTAACCACGACTTCCACCCACTCCTTCCC
CTTGCTGTGAAGATACCCATCGGTCAGAAACAGTGAGGGAGTCGTTCTGT
GGACCCACGACGTCGGCAACGGCTTGGTTGCGCGTGCTGCAGATGAGGTG
GAATCCGGGGGTAGCCCAGGTAGCGGACCTCGGAACGGTTCTGGTGTTGA
GGTGAGCTTGGTCGGGCTGAGGCTGTCGGCGGATCTCTCTACGTGACAAG
TGTTTCGTAGGTGTACATTGACAAGCTGTGAAACCGTGCTTTCTGCAGCT
AAATATAAGCAAGGTATATTTAGCTTTTTCTTTATTGCTGACAGTACGGG
CCGGATGTAGCTCGGAACAAGTTTTGACGTCAAGACGAAAGCTACTACAA
CAACAAAGTACTGATGGAAGAATGCGATGGACAGCGATGGTTTTCGATCG
AACAAGCCACGCGAGACTTAACATCCTGAAACTCCACCGATTCATCATCT
TACACAACAAAAAGCACGCTCACCACATGTAGTAAGTCGCGAACGCACAC
GACGTTGGTTCCACCTCAGTGGCATTAATTCACTCCTGCCTTACTTTTAT
TTCACTCGCCCCAGTATTCCAGCAACCTCGAAGCTGACGAGAGAACTTGA
GTTCGAATTTAGGGCCCGTCGCACGAATTGGGACAAATGTGAACGATCAA
CGATTTCCTCGTGAATACAAACAAATTGACTTCACCGGTCGACGAGGGAA
ACGAAAGGCTTAATTCTCCTCGAGAAAAAGCTCAGACAGGCAGTGCAGAT
TATGGATAGAAGGGCACTATCCTGCTCCCGATAGATGCGCCCGAAAACAA
AATGCATACTCCGGAGTAGAATCTAACGTGCACAATCCTTGACGCTTTTT
AACTGGTCAGCCGGTTAGCTTTTCGATTCTAGTTGAAGAAACACACTGCT
GTCTCGGCTGCTGACCCGGTAGGTCAAGCGATTGCACGTGTTCGGGTCAC
CCTGGGACCACGCAAGCGACGACTTCGAGACGATCAAGTTCACCGCGACA
GGATGGTAAGCTTGTCGTTTTGGACGCGTGCTTTAGAGTGAATGCCTCGG
TCGTAGTTTTTGGGATACGGTATTGGGCTACGTTGTGTTGGAGAACGTTA
GTTTTGTGTTTTCTTTGCGATATTTGGAGGTCGTTGCTGCGTCGCCAAGA
TCTGTTCGGACGATTGTGCAGAATGTCTACTTCGCTACACGGCAATTGTG
AATGTGAAGACAGCCACATCAGGGTTAACAAAATATATCAGGCTTCACCC
TTCGAACCCACAGTGTCATGTGTTTCTTCACTGAAATACCTAATTCTGAT
CATGTGGAAGGAAATCTGGCAATTTTTCATTCGGTCCCTGAGCTGGGCTT
TAGCAATTTTCGGGAAAAGGCATCTCGGTTGAATATATAGTTTTTTTTCG
AGTTCTTCGTTGTGAAGTGCGATTGCTTTGTCCAAGCGATCTCGATCGAC
ACGCCTGTATTGATGCTGCTACATTTCGCTTGGCCGTACTTGCCCGCGTT
GTGTCTGAGGTCCTCTCGGGACGTTTGGTGCCACTGAAACTGAACGTTTC
CCGTGCCCCATCGTCTGCTGTGTACCCGCCTCCTTTCGGTGCAATGAAAC
GGCCAGGTTTGGCTCGACAGTGAAATCTGCGTTCTCCAAGATGTTTAAGA
AGAAAAAAACATGA
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Coding sequence (CDS) from alignment at chr_27:5952271..5956934+

>Ec-27_006450.1 ID=Ec-27_006450.1|Name=Ec-27_006450.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=702bp|location=Sequence derived from alignment at chr_27:5952271..5956934+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGCTGCTCGCTGGTACTGCCGTGCTGCCCCTCATTGTTCCTGTTCTTCT
TGTATGGCCACCCGGGGGCATGGCTTCGACGTCTAAGAGCTACGAGAAAG
CCAGGGCTAGCGTTGAAAAGGCAACGGGCCACTTCGCGGATGTCCAGACA
ATCTCGGCCAAAGACGTGCTACGGCTAGAACAAGAAGGGAAAAAGGTGCT
TCTGGTCGACGTTCGTACGGAGGACGAGATGAAGGTTTCCATGCTCCGAG
GCGCTCTTACCAGGGAAGAGTTCGAGAACAGCAGCCTGGGAGAGGCGGCC
AGGACCGGGAAAAAGTTCCGAGAACGTTCCGGGGAAGGCGAGGAGGCTTG
GGGTGTCGTGGCGCCGTACTGTACAGTTGGATTCCGTTCCGGCCAGTACG
CCAAGAAGCTCGTGGACTTGGGATACCCATCGGTCAGAAACAGTGAGGGA
GTCGTTCTGTGGACCCACGACGTCGGCAACGGCTTGGTTGCGCGTGCTGC
AGATGAGGTGGAATCCGGGGGTAGCCCAGGTAGCGGACCTCGGAACGGTT
CTGGTGTTGAGGTCAAGCGATTGCACGTGTTCGGGTCACCCTGGGACCAC
GCAAGCGACGACTTCGAGACGATCAAGTTCACCGCGACAGGATGGTTTGG
CTCGACAGTGAAATCTGCGTTCTCCAAGATGTTTAAGAAGAAAAAAACAT
GA
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Synonyms
The feature 'Ec-27_006450.1' has the following synonyms
Synonym
Esi0000_0015
Esi_0000_0015