Ec-27_006440.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-27_006440.1
Unique NameEc-27_006440.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length341
Homology
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BLAST of Ec-27_006440.1 vs. uniprot
Match: D8LAT5_ECTSI (Calmodulin 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAT5_ECTSI)

HSP 1 Score: 285 bits (729), Expect = 1.490e-93
Identity = 147/168 (87.50%), Postives = 147/168 (87.50%), Query Frame = 1 
Query:  517 KVVRSNGLVDTSPGDPWLGADDTERPVVAFTYKVFRRYYLAKIQGELLEVNIRQAWEDLHQGTGGKLMPSGASPIGFDATEASAETSGGGDGGRHYRHHQQRGDSDIGGGDSRGRPYVARAELQKILTREGEALTDEEVDELLRECRPDEVGRIVYEGYRRMLIDPSL 1020
            KVVRSNGLVDTSPGDPWLGADDTERPVVAFTYKVFRRYYLAKIQGELLEVNIRQAWEDLHQGT                     ETSGGGDGGRHYRHHQQRGDSDIGGGDSRGRPYVARAELQKILTREGEALTDEEVDELLRECRPDEVGRIVYEGYRRMLIDPSL
Sbjct:   35 KVVRSNGLVDTSPGDPWLGADDTERPVVAFTYKVFRRYYLAKIQGELLEVNIRQAWEDLHQGT---------------------ETSGGGDGGRHYRHHQQRGDSDIGGGDSRGRPYVARAELQKILTREGEALTDEEVDELLRECRPDEVGRIVYEGYRRMLIDPSL 181
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BLAST of Ec-27_006440.1 vs. uniprot
Match: A0A7S2S2F4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2F4_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 4.370e-8
Identity = 27/54 (50.00%), Postives = 39/54 (72.22%), Query Frame = 1 
Query:  856 GRPYVARAELQKILTREGEALTDEEVDELLRECRPDEVGRIVYEGYRRMLIDPS 1017
            G  Y+ + +L +++T+ G+ LTDEE  E++REC PDE GRI +E YR MLID +
Sbjct:  192 GEEYITKDKLFEVMTKHGDKLTDEEAAEMIRECNPDEEGRIFFEKYRTMLIDTT 245
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BLAST of Ec-27_006440.1 vs. uniprot
Match: UPI0007EE2F04 (LOW QUALITY PROTEIN: calmodulin-like protein 3 n=1 Tax=Oryctolagus cuniculus TaxID=9986 RepID=UPI0007EE2F04)

HSP 1 Score: 53.5 bits (127), Expect = 1.900e-5
Identity = 25/54 (46.30%), Postives = 37/54 (68.52%), Query Frame = 1 
Query:  847 DSRGRPYVARAELQKILTREGEALTDEEVDELLRECRPDEVGRIVYEGYRRMLI 1008
            D  G  YV+ AEL+ ++TR GE L+DE+VDE++R    D  G++ YE + RML+
Sbjct:   59 DKDGNGYVSAAELRHVMTRLGEKLSDEKVDEMIRSANTDGDGQVNYEEFVRMLV 112
[Close]
BLAST of Ec-27_006440.1 vs. uniprot
Match: A0A670JEP2_PODMU (Calmodulin-A-like n=1 Tax=Podarcis muralis TaxID=64176 RepID=A0A670JEP2_PODMU)

HSP 1 Score: 53.9 bits (128), Expect = 2.870e-5
Identity = 25/55 (45.45%), Postives = 38/55 (69.09%), Query Frame = 1 
Query:  847 DSRGRPYVARAELQKILTREGEALTDEEVDELLRECRPDEVGRIVYEGYRRMLID 1011
            D  G  Y++ AEL+ +LT  GE LTDEEVDE+++E   D  GR+ YE + R++++
Sbjct:   94 DKDGNGYISTAELRHVLTNLGEKLTDEEVDEMIKEADVDGDGRVNYEEFVRVMME 148
[Close]
BLAST of Ec-27_006440.1 vs. uniprot
Match: UPI00193F3D22 (neo-calmodulin-like n=1 Tax=Mauremys reevesii TaxID=260615 RepID=UPI00193F3D22)

HSP 1 Score: 54.3 bits (129), Expect = 3.250e-5
Identity = 25/47 (53.19%), Postives = 35/47 (74.47%), Query Frame = 1 
Query:  865 YVARAELQKILTREGEALTDEEVDELLRECRPDEVGRIVYEGYRRML 1005
            Y++ AEL++I+T  GE LTDEEVDEL++E   D  GR+ YE + RM+
Sbjct:  125 YISVAELRQIMTNLGEKLTDEEVDELIKEADADRDGRVNYEAFVRMM 171
[Close]
BLAST of Ec-27_006440.1 vs. uniprot
Match: A0A6H5K6L7_9PHAE (Calmodulin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L7_9PHAE)

HSP 1 Score: 51.2 bits (121), Expect = 4.350e-5
Identity = 25/54 (46.30%), Postives = 37/54 (68.52%), Query Frame = 1 
Query:  847 DSRGRPYVARAELQKILTREGEALTDEEVDELLRECRPDEVGRIVYEGYRRMLI 1008
            D  G  +++ AEL+ I+T  GE LTDEEVDE++RE   D  G+I YE + +M++
Sbjct:   15 DKDGNGFISAAELRHIMTNLGEKLTDEEVDEMIREADIDGDGQINYEEFVKMMM 68
[Close]
BLAST of Ec-27_006440.1 vs. uniprot
Match: A0A6F9B9H4_9TELE (EF-hand domain-containing protein n=1 Tax=Coregonus sp. 'balchen' TaxID=861768 RepID=A0A6F9B9H4_9TELE)

HSP 1 Score: 51.6 bits (122), Expect = 4.380e-5
Identity = 26/58 (44.83%), Postives = 37/58 (63.79%), Query Frame = 1 
Query:  847 DSRGRPYVARAELQKILTREGEALTDEEVDELLRECRPDEVGRIVYEGYRRMLIDPSL 1020
            D  G  Y++ AEL+ ++T  GE LTDEEVDE++RE   D  G++ YEG    L+  +L
Sbjct:   23 DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGQFPHLLSLTL 80
[Close]
BLAST of Ec-27_006440.1 vs. uniprot
Match: A0A7K4SFU7_COLPI (CALMS protein (Fragment) n=1 Tax=Columbina picui TaxID=115618 RepID=A0A7K4SFU7_COLPI)

HSP 1 Score: 52.8 bits (125), Expect = 4.900e-5
Identity = 24/55 (43.64%), Postives = 37/55 (67.27%), Query Frame = 1 
Query:  847 DSRGRPYVARAELQKILTREGEALTDEEVDELLRECRPDEVGRIVYEGYRRMLID 1011
            D  G  Y++ AEL+ ++T  GE LTDEEVDE++RE   +  G++ YE + RM+ +
Sbjct:   74 DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADSNNDGQVNYEEFVRMMTE 128
[Close]
BLAST of Ec-27_006440.1 vs. uniprot
Match: A0A091KRQ9_COLST (Calmodulin, striated muscle n=1 Tax=Colius striatus TaxID=57412 RepID=A0A091KRQ9_COLST)

HSP 1 Score: 53.1 bits (126), Expect = 5.120e-5
Identity = 23/55 (41.82%), Postives = 39/55 (70.91%), Query Frame = 1 
Query:  847 DSRGRPYVARAELQKILTREGEALTDEEVDELLRECRPDEVGRIVYEGYRRMLID 1011
            D  G  Y++ AEL+ ++T+ GE LTDEEVDE+++E   +  G++ YE + RM+++
Sbjct:   92 DKDGNGYISAAELRHVMTKLGEKLTDEEVDEMIKEADSNNDGQVNYEEFVRMMME 146
[Close]
BLAST of Ec-27_006440.1 vs. uniprot
Match: UPI00189F1B73 (calmodulin-like n=1 Tax=Sebastes umbrosus TaxID=72105 RepID=UPI00189F1B73)

HSP 1 Score: 53.1 bits (126), Expect = 5.420e-5
Identity = 25/54 (46.30%), Postives = 38/54 (70.37%), Query Frame = 1 
Query:  847 DSRGRPYVARAELQKILTREGEALTDEEVDELLRECRPDEVGRIVYEGYRRMLI 1008
            D  G  Y++ AEL++++T  GE LTDEEVDE++RE   D  GR+ YE + +M++
Sbjct:   95 DKDGCGYISAAELRQVMTNLGEKLTDEEVDEMIREADIDGDGRVNYEEFVKMMM 148
The following BLAST results are available for this feature:
BLAST of Ec-27_006440.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D8LAT5_ECTSI1.490e-9387.50Calmodulin 2 n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A7S2S2F4_9STRA4.370e-850.00Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
UPI0007EE2F041.900e-546.30LOW QUALITY PROTEIN: calmodulin-like protein 3 n=1... [more]
A0A670JEP2_PODMU2.870e-545.45Calmodulin-A-like n=1 Tax=Podarcis muralis TaxID=6... [more]
UPI00193F3D223.250e-553.19neo-calmodulin-like n=1 Tax=Mauremys reevesii TaxI... [more]
A0A6H5K6L7_9PHAE4.350e-546.30Calmodulin n=1 Tax=Ectocarpus sp. CCAP 1310/34 Tax... [more]
A0A6F9B9H4_9TELE4.380e-544.83EF-hand domain-containing protein n=1 Tax=Coregonu... [more]
A0A7K4SFU7_COLPI4.900e-543.64CALMS protein (Fragment) n=1 Tax=Columbina picui T... [more]
A0A091KRQ9_COLST5.120e-541.82Calmodulin, striated muscle n=1 Tax=Colius striatu... [more]
UPI00189F1B735.420e-546.30calmodulin-like n=1 Tax=Sebastes umbrosus TaxID=72... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_27contigchr_27:5947283..5952029 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Length1023
Hectar predicted targeting categoryother localisation
Gene idEc-27_006440.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-27_006440Ec-27_006440Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_27 5947283..5952029 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_006440.1Ec-27_006440.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_27 5947283..5952029 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_006440.1.9Ec-27_006440.1.9Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5947283..5947599 -
Ec-27_006440.1.8Ec-27_006440.1.8Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5947839..5947929 -
Ec-27_006440.1.7Ec-27_006440.1.7Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5948380..5948475 -
Ec-27_006440.1.6Ec-27_006440.1.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5948985..5949053 -
Ec-27_006440.1.5Ec-27_006440.1.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5949468..5949585 -
Ec-27_006440.1.4Ec-27_006440.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5950054..5950134 -
Ec-27_006440.1.3Ec-27_006440.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5950896..5951005 -
Ec-27_006440.1.2Ec-27_006440.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5951437..5951520 -
Ec-27_006440.1.1Ec-27_006440.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5951973..5952029 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_006440.1CDS:Ec-27_006440.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_27 5947283..5947599 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-27_006440.1 ID=Ec-27_006440.1|Name=Ec-27_006440.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=341bp
MGEHADTTGRRFIDPNDDKVDYSDDEDGLLELYDDYAYDHSNEKAEEDEE
GFPQHNYEEEDDGEGQVLSSVYEEDQAHETSDMCGRCAGAESEDGQDAGI
KISQKDEHRLLGAFLLAVDGGLSGSGRDSEGGGRCDEPQLPTNAPDCLKK
FRTIAASLGLKTTREQLREDFEKVVRSNGLVDTSPGDPWLGADDTERPVV
AFTYKVFRRYYLAKIQGELLEVNIRQAWEDLHQGTGGKLMPSGASPIGFD
ATEASAETSGGGDGGRHYRHHQQRGDSDIGGGDSRGRPYVARAELQKILT
REGEALTDEEVDELLRECRPDEVGRIVYEGYRRMLIDPSL*
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spliced messenger RNA

>Ec-27_006440.1 ID=Ec-27_006440.1|Name=Ec-27_006440.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1023bp|location=Sequence derived from alignment at chr_27:5947283..5952029- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGGGCGAGCATGCGGACACCACTGGGCGACGATTCATTGATCCCAACGA
TGACAAGGTCGATTACAGCGACGACGAGGATGGATTATTGGAACTGTACG
ACGACTACGCATACGACCACAGCAACGAGAAAGCAGAAGAGGACGAAGAA
GGCTTCCCGCAACACAACTATGAGGAGGAGGACGACGGCGAGGGTCAGGT
TCTAAGCTCCGTCTACGAAGAAGATCAAGCGCATGAGACGAGCGATATGT
GCGGTAGGTGTGCTGGTGCCGAGAGTGAGGATGGCCAGGACGCCGGAATC
AAGATCAGTCAGAAGGACGAGCATAGACTGCTTGGGGCGTTTTTGCTGGC
GGTGGATGGTGGTCTGAGTGGAAGCGGCAGAGACAGTGAGGGTGGGGGGC
GCTGTGACGAGCCCCAGCTGCCGACAAATGCCCCTGATTGCTTAAAGAAG
TTTAGAACCATCGCTGCCTCGTTGGGGCTGAAGACCACTCGGGAGCAGTT
AAGAGAAGACTTTGAGAAGGTCGTTCGCAGCAACGGGCTGGTAGACACCT
CCCCCGGGGACCCTTGGCTAGGGGCCGATGACACGGAGAGACCGGTCGTC
GCCTTTACCTACAAGGTGTTCCGACGGTACTATCTAGCCAAGATACAAGG
GGAGCTACTGGAAGTCAACATCCGGCAAGCGTGGGAGGATCTTCACCAGG
GAACAGGAGGCAAGCTCATGCCGTCCGGGGCATCCCCCATCGGTTTTGAC
GCAACGGAAGCGTCGGCAGAAACATCCGGCGGGGGAGACGGAGGACGGCA
CTATCGCCACCACCAGCAACGCGGAGACTCCGACATTGGTGGAGGCGACT
CTCGCGGTAGGCCGTACGTGGCGCGCGCAGAGCTGCAGAAGATCTTGACG
AGGGAGGGGGAGGCCTTGACCGACGAAGAGGTAGACGAGCTGCTCAGAGA
GTGCCGTCCAGATGAGGTGGGCCGCATCGTGTACGAGGGCTACCGAAGGA
TGCTCATCGATCCGTCGCTCTGA
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protein sequence of Ec-27_006440.1

>Ec-27_006440.1 ID=Ec-27_006440.1|Name=Ec-27_006440.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=341bp
MGEHADTTGRRFIDPNDDKVDYSDDEDGLLELYDDYAYDHSNEKAEEDEE
GFPQHNYEEEDDGEGQVLSSVYEEDQAHETSDMCGRCAGAESEDGQDAGI
KISQKDEHRLLGAFLLAVDGGLSGSGRDSEGGGRCDEPQLPTNAPDCLKK
FRTIAASLGLKTTREQLREDFEKVVRSNGLVDTSPGDPWLGADDTERPVV
AFTYKVFRRYYLAKIQGELLEVNIRQAWEDLHQGTGGKLMPSGASPIGFD
ATEASAETSGGGDGGRHYRHHQQRGDSDIGGGDSRGRPYVARAELQKILT
REGEALTDEEVDELLRECRPDEVGRIVYEGYRRMLIDPSL*
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mRNA from alignment at chr_27:5947283..5952029-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-27_006440.1 ID=Ec-27_006440.1|Name=Ec-27_006440.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=4747bp|location=Sequence derived from alignment at chr_27:5947283..5952029- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGGCGAGCATGCGGACACCACTGGGCGACGATTCATTGATCCCAACGA
TGACAAGGTAGCGTTCCCTGTTTCGTAGTTTGGCGACTTGGAGGACATGT
TTGAATGTTGTTTTGTACTTGTAGCAAGGTGCCCGCTCTTGGGGGCTGAC
ATCGACGATAAGTTGGGAGGATCTTTGCTGCGATGCTAGCGACAACAGCG
GCAAGAGCACATAATTTGACAGATTCCGTAACATCTCTGTATGCACGAAC
CCCAGCACACCGGGGTGAACCATGTTGGCACACACCTCTGTATGTCGTCG
AACTACAGGAAATAACTGCCAATCCGGTTTAGCACGATGCCCTCAATAGC
GCTTGTAACATTTTGTGACACTATGGACCGCTCAACCGGGATCACGACTA
CAGTTTGATACGAGAGAAGTTACCGTACGTCGTCGACTCTGTATGCTACA
CGCACAGCGGAACCAGGGCCTTAACGGGCACAATCTACCCGGCTGCTGAC
TGCCGACAGGTCGATTACAGCGACGACGAGGATGGATTATTGGAACTGTA
CGACGACTACGCATACGACCACAGCAACGAGAAAGCAGAAGAGGTGGGGC
GTGATGACACTGGTATGATAACCCTGTAGAGCAAAGAGGGATGTACGACA
GCCACTTTCCGAATCTTTGGAGAATCCGTGGACGCGTGTCTCTCCAACTT
TTTTTTGTCGTAGTAGTCTTCAATGAAACGGCCAACTCCATCAAGATGAC
AACCAAGAATTGTAAGAGTTCTGAAGCGCAAGTTGCTGATCGCCTAGACT
ATCACTTGCAGCTCATTCGCCCTCAAGGACGTATTCTAGTACGCGGCTCT
CGTCCACAGAAAATGCCACGTTGGAACATGACAAGTGCAAGAACGAGAGC
GCACTGGAATCATTCATGTGCTACAGAGATATGCCGAATGTTTTCTCGAC
GTGAATGCTTACGACCTGACTGGAAAAGGTGTTGCGTATGTACCTCTGGG
TTTTCGTCCTGCTCCCAACATCAGGACGAAGAAGGCTTCCCGCAACACAA
CTATGAGGAGGAGGACGACGGCGAGGGTCAGGTTCTAAGCTCCGTCTACG
AAGAAGATCAAGCGCATGAGACGAGCGATATGTGGTATGTAGCCCTCTGC
ACTCGTAATGCTCAAACCATAACGTCATACTTCGAAGTACATTTCGAGAA
CGGCACGATAGCACTGGTTGCCGGCGGTGGACTGGTTTGACCACTTACCT
TTCAAAGAATACAGGTTTCGCATCAGACATTGGTGACCAAATCTTTTGCT
CTTGGTGGCGGGGAGAATCCTCCAGAAATACACTCACGAAGAATGAGGCT
CTCCCTTTGCGCGACACTTCCAACTTGCTCTGGTGGATCGTGAGTGGGAG
GGTCATGGACACCTCCTCCGCTATCAGCAAGACCTCGGGACACGATTGTA
CATACCATGAGTACTATTGTTTTGCACCATCTCGTTCATCTATCATGGGT
AGTTCTCTATCTACACAGACAGACGATCTGCCTACCTGGACCGGTAGCTC
CAAATCGAGGTCACGCAGAAGTTTCCTCAGCGGGACGCGCATTGTTTCAG
CCTGACAAGGCTCCAGCAGTCCGTTCCTTGAAGAAAGTGCTCACGAAAAG
TGCTTCTTTCACGGTGGTGATTTTCGTGAGACGAAGACAAAAGCAAGGAT
TCGAAGTTTCAAACTAGCGTTGAGTTGATGTCAGTTGTGGTATACCGTAC
GTCCCAAGCCAACGGTAAGAGAATAGGTGCTGGGTGTACGATCACTGTCA
TGGGTCTGCGTCTGGCGGAAAATGGTGCTTAAGTACGCATTATGGTGTGC
TTGCACCGTGCTTTTGGTCCGCTTGTGTTTGCCATATCCATGCAGCGGTA
GGTGTGCTGGTGCCGAGAGTGAGGATGGCCAGGACGCCGGAATCAAGATC
AGTCAGAAGGACGAGCATAGACTGCTGTAAGGACTCGGGAGCCGGTGTGA
GACAACACACATGTAATACAAGTACCTTTGTCAGATGTTTCGCTGGCATT
GCATCCAGGAGAGTTTTTTCTTCTAGGCCTTCTTTGCCACCTCAGAAGCA
ACCCTGGTGACCATTCCTGCGGTACCGAGCATGCCCTTCCAAAAGAAGCA
AGGGTTGGAGCTTTGGAAAGGTTTCCGTGCAAGCGGTTGACTGACTACCA
TATGAACGCCTTCATGTGCAGTGATCGATCTATAGATCATGCCGTCGGTC
CCAGCTACCATCGGAAAGGTTTCGGAGTTCACAAGTCTCTAGTTCACAAG
CCTCTAACCAGGCAATATGTCTCCGGCGGTAGCCGTCCCGGACCTGAAAA
CCGAACGTTCTATTGATCTATACCCCTTGTGGTGCTTCCGTTTCACCTCG
CTGCTCCCTTGACGCCCATGGCACAACGCTACGGTCGTGAGAAGTGGGGC
GTTTTTGCTGGCGGTGGATGGTGGTCTGAGTGGAAGCGGCAGAGACAGTG
AGGGTGGGGGGCGCTGTGACGAGCCCCAGCTGCCGACAAATGCCCCTGAT
TGCTTAAAGAAGGTGCCTGTCGCGCTGCAGGTTGTTCGGTTGTGAAGTAG
CTCACGGCGATGTTGCGTGGTTGTTCCACCAGCAACGTGCAAACCGTGCC
GGGGCAGCAGACCTTAGAACAGGGAAGAGCTTCGCTGCTTGAAGGTCGCG
TGCATCAATGTTAGCTCCTCAGATGCTAGGAACAACCCCTCTTGTCTGGA
TCGATGTACTTGTGAGGCTTCCTCCGCAAAAGTAAAAAGTACGTGCACCC
GTTGCGAAAGCTGTAATGATTCTCGAGAAAAATCGGTGGGAGCATCAAGC
TGGAGAGCTCTCCGTAGGCGTCCGTGAGGGTGTTGCACACTGTTGTTCGC
CAGCTGAACGCGAAGTGCTTGTAGGTGATATCCAAAAGTCTTATGTTTCC
GATCCTTTTCTTCGTCGCCTGCACAGTTTAGAACCATCGCTGCCTCGTTG
GGGCTGAAGACCACTCGGGAGCAGTTAAGAGAAGACTTTGAGAAGGTGGG
AAGCGCTGTAGCACAAACGGAGAAATTGCGCGGAAATCGCAGGCGTGTCG
CGCGGTCTTTCTACCACGTTTTCCCGAACTTGCGCGGTGCGTCTTGCAGG
GGTAGTGCGGTGATGATGAAGCGGCATGTAGCTCTATCATCTTGCTGCAG
AACCACCCGTGATGTCAGATCTACCTCTTGGGGGAGCTGTTTCGTGCCAT
GTATAGAGTCCGAAATCGAACCCTTATGCTAGTCAGCGCTGACTCTTCTC
ATGGTTAGGTTTCGGATTCTAAACATGGCGTCGACGGGGTCCGTGACCAG
TTTCTTTTAACTCTCCGTCTCAACGTCTTTCTGGGGCGCTTTATCGGGCC
AGTCGCGCACATATTCGTAGATTTGGGTTCTAGAGGAGTCCCTGCTAGTA
TGGGTAGGTCACAACCAAGTATCTCCACTCCAGTGATCACAACCCGCGAT
TGTCGCATACGTTTGCGGTCCACGGCTCACGTTTGGTCGTGTCTCCAAAG
AAAGGTCGTTCGCAGCAACGGGCTGGTAGACACCTCCCCCGGGGACCCTT
GGCTAGGGGCCGATGACACGGAGAGACCGGTCGTCGCCTTTACCTACAAG
GTAACCCAACATCAGGGGATATAACCCAACGTCAGGGGATGGAAGACTAA
GTTGATGGGTGGATATCCTGCGGTCTCTTATGATGCAGCTGCACCTGAAT
ATCCGGCTGACGCGAGGGAGCGGTTGATTGATAAGGACGTCGGGAGGGAG
CGTAGGTGATCGTGGCATATCGAGGGGCGGTTCGATCAAGCTGTTGGTTC
GAGCAAGGGCCAAAGATGACCACGCCGAGATCACGTGGGCCAGTCTTCGA
ACCCAGTTTATGTGCATGACTGCCGCATCGGGCAACAAGCCGACTCCGAT
ATATGTGGTTTCGTTGGACCTTCGTATCTACAGTACAGATATTGGATCTG
GGCTAGTTTCGTGCGTTGATACGGGTAGGCGAGCAATACGAAGACCTCTG
TTCTAACGTCCGATCGTCGTGATACGCACACGGTGGGACGGTATGTGCAG
GTGTTCCGACGGTACTATCTAGCCAAGATACAAGGGGAGCTACTGGAAGT
CAACATCCGGCAAGCGTGGGAGGATCTTCACCAGGGAACAGGTATGGCCG
TCGGGGTGAACCGTGGCACATGACGTAACTCACAATAGCAACACACACAC
CAGCACGCCACTTGGTTCGTCGAAACCCCACCGTTCTCCGTCCGGAGAGT
ATGGAGGGGTGAATACTCTGAGCTCCCCGGGGCACTCCAGAAAAAAGAGG
TGTCAGATACAGCAGATGTAAAGGACTGTCGTCGTTACCGCTCTGATCAG
GCGCCACCCATGACCGCTGCTGATGCACAGGAGGCAAGCTCATGCCGTCC
GGGGCATCCCCCATCGGTTTTGACGCAACGGAAGCGTCGGCAGAAACATC
CGGCGGGGGAGACGGAGGACGGCACTATCGCCACCACCAGCAACGCGGAG
ACTCCGACATTGGTGGAGGCGACTCTCGCGGTAGGCCGTACGTGGCGCGC
GCAGAGCTGCAGAAGATCTTGACGAGGGAGGGGGAGGCCTTGACCGACGA
AGAGGTAGACGAGCTGCTCAGAGAGTGCCGTCCAGATGAGGTGGGCCGCA
TCGTGTACGAGGGCTACCGAAGGATGCTCATCGATCCGTCGCTCTGA
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Coding sequence (CDS) from alignment at chr_27:5947283..5952029-

>Ec-27_006440.1 ID=Ec-27_006440.1|Name=Ec-27_006440.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1023bp|location=Sequence derived from alignment at chr_27:5947283..5952029- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGGCGAGCATGCGGACACCACTGGGCGACGATTCATTGATCCCAACGA
TGACAAGGTCGATTACAGCGACGACGAGGATGGATTATTGGAACTGTACG
ACGACTACGCATACGACCACAGCAACGAGAAAGCAGAAGAGGACGAAGAA
GGCTTCCCGCAACACAACTATGAGGAGGAGGACGACGGCGAGGGTCAGGT
TCTAAGCTCCGTCTACGAAGAAGATCAAGCGCATGAGACGAGCGATATGT
GCGGTAGGTGTGCTGGTGCCGAGAGTGAGGATGGCCAGGACGCCGGAATC
AAGATCAGTCAGAAGGACGAGCATAGACTGCTTGGGGCGTTTTTGCTGGC
GGTGGATGGTGGTCTGAGTGGAAGCGGCAGAGACAGTGAGGGTGGGGGGC
GCTGTGACGAGCCCCAGCTGCCGACAAATGCCCCTGATTGCTTAAAGAAG
TTTAGAACCATCGCTGCCTCGTTGGGGCTGAAGACCACTCGGGAGCAGTT
AAGAGAAGACTTTGAGAAGGTCGTTCGCAGCAACGGGCTGGTAGACACCT
CCCCCGGGGACCCTTGGCTAGGGGCCGATGACACGGAGAGACCGGTCGTC
GCCTTTACCTACAAGGTGTTCCGACGGTACTATCTAGCCAAGATACAAGG
GGAGCTACTGGAAGTCAACATCCGGCAAGCGTGGGAGGATCTTCACCAGG
GAACAGGAGGCAAGCTCATGCCGTCCGGGGCATCCCCCATCGGTTTTGAC
GCAACGGAAGCGTCGGCAGAAACATCCGGCGGGGGAGACGGAGGACGGCA
CTATCGCCACCACCAGCAACGCGGAGACTCCGACATTGGTGGAGGCGACT
CTCGCGGTAGGCCGTACGTGGCGCGCGCAGAGCTGCAGAAGATCTTGACG
AGGGAGGGGGAGGCCTTGACCGACGAAGAGGTAGACGAGCTGCTCAGAGA
GTGCCGTCCAGATGAGGTGGGCCGCATCGTGTACGAGGGCTACCGAAGGA
TGCTCATCGATCCGTCGCTCTGA
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Synonyms
The feature 'Ec-27_006440.1' has the following synonyms
Synonym
Esi0000_0017
Esi_0000_0017