Ec-27_006300.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-27_006300.1
Unique NameEc-27_006300.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length151
Homology
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BLAST of Ec-27_006300.1 vs. uniprot
Match: D8LAV1_ECTSI (Similar to syntaxin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAV1_ECTSI)

HSP 1 Score: 270 bits (689), Expect = 4.950e-91
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 1 
Query:    1 MNDWKAPIGRGAGGGSRNYGGPNGTAEKVDYSRLPNEAGPGDDGEGDDWIQRQIRGHKSQMEHQDAHLSEIGQTASRLGNISLEISKELDQQNKMLENVNTDFEEAIGGLDAVTKKTQELIKKSGGMRNFLIILVXXXXXXXXXXXVLYT 450
            MNDWKAPIGRGAGGGSRNYGGPNGTAEKVDYSRLPNEAGPGDDGEGDDWIQRQIRGHKSQMEHQDAHLSEIGQTASRLGNISLEISKELDQQNKMLENVNTDFEEAIGGLDAVTKKTQELIKKSGGMRNFLIILVXXXXXXXXXXXVLYT
Sbjct:    1 MNDWKAPIGRGAGGGSRNYGGPNGTAEKVDYSRLPNEAGPGDDGEGDDWIQRQIRGHKSQMEHQDAHLSEIGQTASRLGNISLEISKELDQQNKMLENVNTDFEEAIGGLDAVTKKTQELIKKSGGMRNFLIILVXXXXXXXXXXXVLYT 150
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BLAST of Ec-27_006300.1 vs. uniprot
Match: A0A835YWI7_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWI7_9STRA)

HSP 1 Score: 127 bits (319), Expect = 6.930e-35
Identity = 76/150 (50.67%), Postives = 93/150 (62.00%), Query Frame = 1 
Query:    1 MNDWKAPIGRGAGGGSRNYGGPNGTAEKVDYSRLPNEAGPGDDGEGDDWIQRQIRGHKSQMEHQDAHLSEIGQTASRLGNISLEISKELDQQNKMLENVNTDFEEAIGGLDAVTKKTQELIKKSGGMRNFLIILVXXXXXXXXXXXVLYT 450
            MN+WK       GG SR  GG +   +  DYSRLP      DD   +DWI+RQ+R HK+Q+  QD HL +IG+   RLG ISLEISKELD QNKML  +  D++EAI G++ VTKKT+ELIK SGG RNF II             V+YT
Sbjct:    1 MNNWK-------GGSSR--GGMSPYTDTPDYSRLPRNTNASDDE--NDWIRRQVREHKTQVAEQDRHLEDIGRGVERLGEISLEISKELDGQNKMLSEMEVDYDEAIYGMEMVTKKTKELIKTSGGPRNFCIIAFLVAVVVVLLVLVIYT 139
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BLAST of Ec-27_006300.1 vs. uniprot
Match: A0A7S4IM31_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IM31_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 2.090e-22
Identity = 52/133 (39.10%), Postives = 81/133 (60.90%), Query Frame = 1 
Query:   55 YGGPNGTAEKVDYSRLPN-EAGPGDDGEGDDWIQRQIRGHKSQMEHQDAHLSEIGQTASRLGNISLEISKELDQQNKMLENVNTDFEEAIGGLDAVTKKTQELIKKSGGMRNFLIILVXXXXXXXXXXXVLYT 450
            +G   G   K  Y ++P+ +    D  E DD+I +Q+R  + QM+ QD  L  +GQ+A RLG +S+ I +EL QQNK+L+ +  D ++A   LD VT+KT+EL+++SGG +NFLII+            ++YT
Sbjct:    2 FGNSRGARGKGKYRQVPHHDYSDSDSDEADDFISQQVRNQRLQMKRQDEGLEMLGQSADRLGQLSMNIHEELGQQNKLLDEMEDDLDQATTRLDFVTQKTRELVQRSGGKKNFLIIVGLTIVVIILIFLIIYT 134
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BLAST of Ec-27_006300.1 vs. uniprot
Match: A0A7S2P3Q0_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P3Q0_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 6.070e-22
Identity = 51/120 (42.50%), Postives = 72/120 (60.00%), Query Frame = 1 
Query:   91 YSRLPNEAGPGDDGEGDDWIQRQIRGHKSQMEHQDAHLSEIGQTASRLGNISLEISKELDQQNKMLENVNTDFEEAIGGLDAVTKKTQELIKKSGGMRNFLIILVXXXXXXXXXXXVLYT 450
            Y ++P      D    DD+IQRQI+  + Q++ QD  L  +  +A+RLG +S+ IS ELD QNKML ++  D  +A   LD VT+KT+ELI+KSGG +NF IIL            ++YT
Sbjct:   16 YQQVPISGDSDDSDNDDDFIQRQIKDQRQQLQKQDEGLEMLSLSATRLGELSMNISTELDAQNKMLNDMENDLSDATDNLDYVTRKTKELIQKSGGKKNFCIILGLIGVIVVLFFLIVYT 135
[Close]
BLAST of Ec-27_006300.1 vs. uniprot
Match: A0A7S2V0G4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0G4_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 4.470e-21
Identity = 49/127 (38.58%), Postives = 75/127 (59.06%), Query Frame = 1 
Query:   70 GTAEKVDYSRLPNEAGPGDDGEGDDWIQRQIRGHKSQMEHQDAHLSEIGQTASRLGNISLEISKELDQQNKMLENVNTDFEEAIGGLDAVTKKTQELIKKSGGMRNFLIILVXXXXXXXXXXXVLYT 450
            G A    YS+LP + G  DD   +D+I+  +R  + Q+  QD HL E+G    RLG++SL+I  E+  QNK++  ++ D  +A   LD +T+KT+EL+ KSGG + F++I+V           VLYT
Sbjct:    9 GAAASSGYSKLPYDEGSDDD---NDYIRNHVRRQQKQLAQQDEHLEELGTAVERLGDMSLKIGDEIADQNKLISAIDNDLADASDRLDMITRKTKELVAKSGGTKWFILIVVLSIILFVLLLLVLYT 132
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BLAST of Ec-27_006300.1 vs. uniprot
Match: K3X1D9_GLOUD (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X1D9_GLOUD)

HSP 1 Score: 91.3 bits (225), Expect = 8.030e-21
Identity = 47/111 (42.34%), Postives = 76/111 (68.47%), Query Frame = 1 
Query:   73 TAEKVDYSRLPNEAGPGDDGEGDDWIQRQIRGHKSQMEHQDAHLSEIGQTASRLGNISLEISKELDQQNKMLENVNTDFEEAIGGLDAVTKKTQELIKKSGGMRNFLIILV 405
            + +  +Y+++ N+     DGE DD++QR+    + + E QD  L ++     RLG++SL IS ELD QN ML+++N + ++A   L AVTKKT+ELI++SGGM+NF++I+V
Sbjct:    7 SGKPANYAKISNDP----DGEEDDYVQRERNQQQVEREKQDESLDQLHTAVKRLGDMSLSISTELDSQNAMLDDLNEETDKASEALQAVTKKTKELIEQSGGMKNFVVIIV 113
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BLAST of Ec-27_006300.1 vs. uniprot
Match: A0A225UWR2_9STRA (t-SNARE coiled-coil homology domain-containing protein n=17 Tax=Phytophthora TaxID=4783 RepID=A0A225UWR2_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 1.650e-20
Identity = 49/103 (47.57%), Postives = 70/103 (67.96%), Query Frame = 1 
Query:   91 YSRLPNEAGPGDDGEGDDWIQRQIRGHKSQMEHQDAHLSEIGQTASRLGNISLEISKELDQQNKMLENVNTDFEEAIGGLDAVTKKTQELIKKSGGMRNFLII 399
            Y++L NE    DD   DD++  Q R  + + + QD  L E+     RLG++SL IS ELD QNKML+++N D ++A   L+ VTK+TQELIK+SGGM+NF++I
Sbjct:   13 YAKLGNEP---DDHADDDYVGEQRRSQQIERQKQDESLDELHSAVKRLGDMSLNISSELDTQNKMLDDLNDDTDKAKQALEIVTKQTQELIKQSGGMKNFIVI 112
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BLAST of Ec-27_006300.1 vs. uniprot
Match: A0A3M6VA46_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VA46_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 3.210e-20
Identity = 48/104 (46.15%), Postives = 71/104 (68.27%), Query Frame = 1 
Query:   91 YSRLPNEAGPGDDGEGDDWIQRQIRGHKSQMEHQDAHLSEIGQTASRLGNISLEISKELDQQNKMLENVNTDFEEAIGGLDAVTKKTQELIKKSGGMRNFLIIL 402
            Y++L NE+    D   DD++  Q R  + + + QD +L E+     RLG+ISL IS ELD QNKML++++ D ++A   L+ VTK+TQ LIK+SGGM+NFL+I+
Sbjct:   13 YAKLGNES----DDHDDDYVTDQYRAQQVERQKQDENLDELHSAVKRLGDISLNISSELDTQNKMLDDLSDDTDKAKQALEVVTKQTQALIKQSGGMKNFLVII 112
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BLAST of Ec-27_006300.1 vs. uniprot
Match: A0A6U3VYT5_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3VYT5_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 7.130e-20
Identity = 45/90 (50.00%), Postives = 65/90 (72.22%), Query Frame = 1 
Query:  133 EGDDWIQRQIRGHKSQMEHQDAHLSEIGQTASRLGNISLEISKELDQQNKMLENVNTDFEEAIGGLDAVTKKTQELIKKSGGMRNFLIIL 402
            EGDD+IQ+QIR  + Q++ QD  L  + Q+A RL  +SL IS+EL  QNKM++ +  D ++A   ++ VT KT++LIKKSGG +NFLII+
Sbjct:   27 EGDDFIQQQIRSQRQQLKEQDHGLEMLSQSADRLAQVSLGISEELGHQNKMIDEMENDLDKATTNINYVTAKTRDLIKKSGGKKNFLIIV 116
[Close]
BLAST of Ec-27_006300.1 vs. uniprot
Match: A0A8K1FI73_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FI73_PYTOL)

HSP 1 Score: 90.9 bits (224), Expect = 9.310e-20
Identity = 50/107 (46.73%), Postives = 75/107 (70.09%), Query Frame = 1 
Query:   88 DYSRLPNEAGPGDDGEG-DDWIQRQIRGHKSQMEHQDAHLSEIGQTASRLGNISLEISKELDQQNKMLENVNTDFEEAIGGLDAVTKKTQELIKKSGGMRNFLIILV 405
            DYS++ NEA   DD  G DD+++ Q    +++ + QD  L ++     R+G++SL IS EL+ QN ML+++N D ++A   L AVTKKTQELIK+SGGM+NF++I+V
Sbjct:   12 DYSKINNEA---DDSPGEDDYVRNQRSLQQAERQKQDESLDQLHVAVKRIGDMSLTISSELETQNSMLDDLNEDTDKANDALQAVTKKTQELIKQSGGMKNFIVIIV 115
The following BLAST results are available for this feature:
BLAST of Ec-27_006300.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LAV1_ECTSI4.950e-91100.00Similar to syntaxin n=1 Tax=Ectocarpus siliculosus... [more]
A0A835YWI7_9STRA6.930e-3550.67t-SNARE coiled-coil homology domain-containing pro... [more]
A0A7S4IM31_9STRA2.090e-2239.10Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S2P3Q0_9STRA6.070e-2242.50Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2V0G4_9STRA4.470e-2138.58Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
K3X1D9_GLOUD8.030e-2142.34t-SNARE coiled-coil homology domain-containing pro... [more]
A0A225UWR2_9STRA1.650e-2047.57t-SNARE coiled-coil homology domain-containing pro... [more]
A0A3M6VA46_9STRA3.210e-2046.15t-SNARE coiled-coil homology domain-containing pro... [more]
A0A6U3VYT5_9STRA7.130e-2050.00Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A8K1FI73_PYTOL9.310e-2046.73Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_27contigchr_27:5825603..5832173 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score92.8
Seed ortholog evalue1.5e-16
Seed eggNOG ortholog67593.Physo133267
Length453
Hectar predicted targeting categoryother localisation
Gene idEc-27_006300.1
EggNOG free text desc.Helical region found in SNAREs
EggNOG OGs2CY29@1,2S1F4@2759,3QFIQ@4776
COG Functional cat.U
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-27_006300Ec-27_006300Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_27 5825603..5832173 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_006300.1.4Ec-27_006300.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5825603..5825682 -
Ec-27_006300.1.3Ec-27_006300.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5826318..5826445 -
Ec-27_006300.1.2Ec-27_006300.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5826918..5826988 -
Ec-27_006300.1.1Ec-27_006300.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5832000..5832173 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_006300.1CDS:Ec-27_006300.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_27 5825603..5825682 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_006300.1Ec-27_006300.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_27 5825603..5832173 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-27_006300.1 ID=Ec-27_006300.1|Name=Ec-27_006300.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=151bp
MNDWKAPIGRGAGGGSRNYGGPNGTAEKVDYSRLPNEAGPGDDGEGDDWI
QRQIRGHKSQMEHQDAHLSEIGQTASRLGNISLEISKELDQQNKMLENVN
TDFEEAIGGLDAVTKKTQELIKKSGGMRNFLIILVLIAILAVLVVLVLYT
*
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spliced messenger RNA

>Ec-27_006300.1 ID=Ec-27_006300.1|Name=Ec-27_006300.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=453bp|location=Sequence derived from alignment at chr_27:5825603..5832173- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGAACGACTGGAAGGCTCCCATTGGCAGGGGCGCCGGAGGGGGCAGTAG
AAACTACGGGGGTCCAAATGGCACTGCGGAGAAAGTGGACTACTCGCGGT
TGCCGAACGAGGCTGGACCTGGCGATGATGGGGAGGGAGACGACTGGATA
CAGCGACAGATCAGAGGACACAAGAGCCAAATGGAGCACCAGGATGCACA
CTTGAGCGAGATTGGTCAGACGGCATCGCGTTTAGGGAACATCAGCTTGG
AGATATCGAAGGAATTGGATCAGCAGAACAAGATGCTGGAGAACGTGAAC
ACGGACTTTGAGGAGGCAATAGGAGGCCTTGACGCGGTCACGAAAAAGAC
GCAGGAGCTCATCAAGAAGTCAGGCGGGATGAGAAATTTCCTCATCATCT
TGGTCCTCATTGCCATCCTGGCCGTTCTCGTTGTCCTCGTGCTCTACACA
TGA
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protein sequence of Ec-27_006300.1

>Ec-27_006300.1 ID=Ec-27_006300.1|Name=Ec-27_006300.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=151bp
MNDWKAPIGRGAGGGSRNYGGPNGTAEKVDYSRLPNEAGPGDDGEGDDWI
QRQIRGHKSQMEHQDAHLSEIGQTASRLGNISLEISKELDQQNKMLENVN
TDFEEAIGGLDAVTKKTQELIKKSGGMRNFLIILVLIAILAVLVVLVLYT
*
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mRNA from alignment at chr_27:5825603..5832173-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-27_006300.1 ID=Ec-27_006300.1|Name=Ec-27_006300.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=6571bp|location=Sequence derived from alignment at chr_27:5825603..5832173- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGAACGACTGGAAGGCTCCCATTGGCAGGGGCGCCGGAGGGGGCAGTAG
AAACTACGGGGGTCCAAATGGCACTGCGGAGAAAGTGGACTACTCGCGGT
TGCCGAACGAGGCTGGACCTGGCGATGATGGGGAGGGAGACGACTGGATA
CAGCGACAGATCAGAGGACACAAGGTGGGTTCGAAAGCTTCTGTGGGTTC
ACGGTAGATCGTAAGTCGCGTGTCTGGTAATAACGTAATGGCCAGTATCT
TGACGGGGTTGTTTTGGAGTCTGCGGAGAAGGTTGATTGTAAAACAGTGT
CAGGCGTTTACACCCCACCGTCATACATGTAGAGCTCGGAACATCTGCGG
GAAAATACAATTACACTTGCTACGTCAACGAAAGACTTGCCCGCTCGAGG
TACAAATGGCACGCGGTTCGGGAGGGATGCGTTGAAGTTTTACAGCTAGC
GTTGGGGGACAGTTGCTGGACACAAAGAGTTTTTTGTCGGTTTAAACTCT
AGTCTGCACACATTGATGTGGAACGACGATGCCACCCGGAACAATTGCAT
TGTGCCGTTTCCGCCTGCTTGGGGTAGGGCAATTTGCACACTCACAAGTT
GTTTCATTGCCTGACAGCAACAATAAAGCGAATCGTCTCTTTCCGTATGC
ACAACGGTTAAAACTCTAAACGTGTAGGCCAAATCCTCACAGTCCAGCTA
TAATATCTGTACAACAGGCAACACTGAGTTTTCCAGTTCGATCGGATCAA
CACAACGCCGGGGCCAATCCAAATTTTGCTCCAAGATTTCAAACAACTCT
TGCGGCTGAGAAAACATGTGCTGACCCCCCCCCGGGTCTTGTCTCCTAGC
TCCCTCACCCACGGCTCTATTGATTCAGCTGCCTCTCAATGCACGAAGCA
CCTCCCCAAGAGGAAACACATTGTCGAGCAAGTCCTGATGGCGTCTTGCC
GGTGCTGCGGTGGACTGCTGTTTCTTTGAGGGTTAGGGCCTGGTGTGCGT
GCTCGCGTGCCCCCGCCACGCCTTTCTGCTCACCACGCCTCCCCTCTCTC
TTGTCTTTCTCTCCTCTCCAGCAGAGAGCACAGCAAAACCGTCCGTCTCC
TCTGTCGGGGTGCTGTGGAATTGTTCGCCGAGAGTATAGTTTGGCACAAC
ACGCAAACAACCAAGCGCAAGTGACGCTTCTTCTATGAATACCTTCTTCT
TGTGACTCTAGTCCGTGTGTGTGCAAGCAAGCGAGGCAGAGCAGCAGCTG
TGAACTGCTGTAACTCAAACATACGGCGCCTTCTACCATATACAACACTC
CATACCACACCCCCTGGACCGCTTTTCTAGTCTCGATTTCTCAACAGCGG
AAAGAGTCACAGCGCTGAAACCGGTGGCGTTGAAGCCGTCTCGTCGAGAG
CTTTGCCAAAGTGTACCGCTTCTATTATGGGCATTGTGTGCGCACCCCAG
CACGTAGCAGCAGAAGCTGATGCCCACCGCCGCTAGTCGATGTGATAGCT
CATGGAGCTTGTAGCAGCAGAAGCACAGCAGTACTTCATTGCCGAAGATG
AGAGATGTTGTAAATACGGCGCTCAGGTGGCCAGCACAGACAGATACACC
AGACAGACGGTTGTAGTCAAGGCAGTATGCCAGCAGCATCCAAGGTACGA
CAAGGACAGCTAAGGTACCCAGACAGTCCGATAGATCACAGAGAGAGAGA
TTCCAAAGAGTAAGGTCGAGCACCGAACGACAGTGAGACAGACTACGTAC
AGTATATGTAGTTCCTCCGCATACGTTACGTTCCAACCGACACATGAGAT
ATACGTACGTCACTAGTGAACATTGACTAAGAAAGGAGATGCGAAGACAT
TTCCATAACACTCCCGTTCAATGAAATTTGCCTGTGATAACCTGCGAAAT
TTGAAAACCATTTCAGAAAAATAACTGCCAGCAACAGACTATCTGGTGAA
ATGAGTTTACACAAAATAACCGATAATAAAAACTGACAGATCACACCCAT
GTTTCAGAGTCATTAGCTCCCCGAAGTTCTTGATGAGGTCGAGTAAGAGA
CGAAGGCGATGCTCACTCAGGAGTTTGGTCCCGATGTCGGCGAGCTGATG
ATCCGTAGAAATGTAGTGAATGGTGATTGCGCCTTCCTTGACCAGTTCTC
GAATATAGAGGAAACGTAAGGCGATGTGTTTCGTACGGGAACTGTATGCT
TGATTCCCGATGACGTGGAGGGTGGCCGTGCTGTCGATGTACAACGGCAC
TTGACCGAACTGCTGTCCGAACCCTAGCTCAGTCATCATAATGGAGCAGG
AAATCGCTTCCTTCATTGTTCATGCTACAGTCACCAGCTCCGCCTCCATG
GTCGACATTGCCGTAAAGCTCTGTGGACCGGTCTTGAAGCTTATGGGGGC
TTTTGCCATCATGATGATGTACGATGAAGTTGACTTGGCATTGTCCGGGT
TGTTACCCCAGTTGGCATCCGAGAATGCAGGCAGCATGAAGCCTCCTCGG
TTGTACGTGATGCTAAAACCGGGTGTTCCAGCGAGATACCGCAGGTGCTT
CGCAGTCGCCATGTGCGCCTTAGCTGGCTTGGAACATGGCGCGTGCTGCA
AGCATTCATTACATCAACCGAGAAATCTGAGCGGGATACACGATCGACCC
GGTGATGGCCTGATACCTCTGCGTTTCCTCCTTGTTCAAGAGGGTCTCGA
CAGGCTGCTCCGTGGTTAGCTCCGAACCAAACCCTGGGATAGTGGTGGGC
CTGCATTTCTCCATACCAAACCACGCAAGAATAGGCTTGGGGTAGTCGGC
TTGAGTGATGGTGCGCGTTCCATGTTCACGATCGCGAGTGACCTACACCC
CTAGCACAAGTGGCACATCTCCTAAGTCACTCATCTGGAACTGCTCCATG
AACTTCTTCTTGATCGCTTCTATCACCTCGATGTTTCCTCCGATGACGAG
AAGATCGTCCACGTAGAGGGTGAACATCACAACCGTGCTGTTGTGTTTGT
AGATGTACACGCAGGAGTCCGACTTGAGTGGCTTAAATCCCAGTTCGATG
AGTTTTGGTCGATTATTTTCCACCAATTTTGGGGACGTTGGTCTAACCCG
TACAAACTCTTTCCAAGCTTCATCACAAGCTTCTCTCCTTTTGCATTATT
GGTTTCGAACCCAGGTGCCATCTTGACGAACACGTCTTCTTCTATGTCAG
CATACAGAGAAGCAGTCTTCACGTCAAGTTGCCGTACCTCCCAGTCCATT
TCAGCTGCGGTTGCCAGTACCATCCGGACGCTTTGTAGTCTGCAGACGGG
AGCGAAGGTACCACCGCAATCCTTTCCGTAAACCTGATTAGATCGATTAG
CCTGGCCTTGTAAGTGTTGTCTGCCTTCACCTTGAACACCCATTACGTTT
TGTCCGTGAGGAAAATCAGACTGCGGAACGAGTGTGTAGTCCTTTGATTC
GTGGAGACTCTTGATCTCCCCCGAGGCCTTACTGACCCTAACNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCATTAGTTACCAGTCC
ACCCGTCTCCCCCCAACACTTTCTTGGAGACGTACTGCCATGCAAACTCG
CCTGGTCCAGATAGATCCATCTTGAGAGCAAGAGATAGAAACACCCACAC
CCCGGTTGCCTCTCGTATATTATAGCTGAAACCCCCTGGGCCATCAGAGG
CCCCTTGCTATTTCCTTCGGCTCCAACCTGGACGCACGGGTCACTGTCGG
AAGCGGTGGTGAAAATTTGAGGTAGATGCGAGAACTTCTTTTGTCGGAAT
TCTCTCGCTTTTCCAACACCGGGACCACCATCTTAGACCGACTATTCAGA
CGACTGATTTGAGACAGATGACTGCCCACGTAGGGCATCTGACCCCCTCG
ATGGTATGCTCCTGCCAAGGTGGCTACCATGACCGGGCGAAGCTTGTTCG
GACATCATCTCGACCAGCTGTGCGTGAGATGCCTTGAGACGCCCCTCCGC
GCCCGGGTTTCCTTGGTGCAGTTCTGCGACGACGGGGAGGCCCAGCTTTT
GGACCCGTTCAAGTAAAGCTTCATTTTCTCGTCACCCACGAAGGATGCGC
TTGTACCAACCACTCTAGGGTGCTTGTATCCTCAGGCAGTTTAGCCTAGA
CTGCTGGACAGTCAATGAGTAGCGATCGTAGTTTCAGTCGTCCCACCAGG
CATGGAGAGCAGCCCCTCGGCTACGCTCTCTCCAGTCGTGCTGAAACACT
TTCTGGTCTCGTGTCTTCGCATCTACTTTTGTCCCCCTTTTTCCCCGAAA
ACTTCATGAACGCCTTCAAACGGCACGGATTCGAAACTCCCATCGCTTGT
TCACCGGCCGGACCGTGCGTGCATATACCATCCCAATTCCTGTCAGCTGG
TTGTCTCAAAACAGCGGCGACGTTTTTTTTACACCCAGCCAAGACCGCGT
CTGACCCTAACGCCGAGTATCGTCGCCAGGCGGTGAGGTGCCTCTGGGTG
TGCCGTACGTCAGGAGCCTCGATTGCGGTGCTATTTCGGGCAATACGTGA
AAGGCTACTGACAAGAGTTTTATGACCGTGTTGCGGGAAAGTCTGCGGGC
TCCGTAAAAGCCTGGGGCGAAACCGGGCTAAGATGTTCTCGTGAAACCGA
GTGCAAGTGATGTGTGTACGGCGTGCACGTTTAACTCGAACCCCGCTTTC
GTCGTCTTCGCGCTCGGCTCACCCTCTACTGCCAGAGCCAAATGGAGCAC
CAGGATGCACACTTGAGCGAGATTGGTCAGACGGCATCGCGTTTAGGGAA
CATCAGGTGCGGACTGCTGCAAGCTTAGGGATCGGCGGGAGGGGAGGGGG
GGGGGGGGCATGGAGGGCTAGGTTGCACCTAAACGTTACGTCCATGAATG
AACCAATTGTCAAGGTTTGACCGCCGTCATTGAGATAAACTTCGACAACG
CCCAGGCGTGCAGCAGGTCTGTCCTCCACACGAGCTACGTCTACGCCCTG
CCTCGCCTTCGTTAACGTATGTGGCACCCTCGATTACTGTAGCGGGCATC
AAAACGACAGTTTAAATCTACAGTCTTTCCAAGGTCGTCTCGGGACATTT
GCACCGTCAAAAACGCAGCGATCCGGACGTCATCATCCATGGTGTGCCTT
GTAGGGTATTGTTCGTCATATCGCGTGCTTACCCTTCAGTCTACCGGATT
GATAATTTTCCCCCAAACATGGCCTTGACGACCCGCATCCCCCGCCCTCT
CTTTTAAACCTTCCGTCTGAACGAGTAGCTTGGAGATATCGAAGGAATTG
GATCAGCAGAACAAGATGCTGGAGAACGTGAACACGGACTTTGAGGAGGC
AATAGGAGGCCTTGACGCGGTCACGAAAAAGACGCAGGAGCTCATCAAGA
AGTCAGGTGAGGGCATGCTTACGTCCGCTCCAAGCAACTGCTGTGGACGC
CTTTCCGCCAGCATGCGCCTCGACAACGCCTAGGGGTTCTAATGCTGTGA
TGCGCCGACGCTACATAAGTGCACCCCCGTTGCTTTGCCATTCGTGGCGC
ATCGCTTGCCTCCTATAATAGTGGCAACCGATACCCATACTGGTGACCCT
GTGTAGATTGTAGACATCACTGGGGGGGGGGGAGTGATCCGCATTTTGCG
CAGCTTGTGCTCGAGGGAACACGCGACCACGACCAGAGACCCGGGCAGTT
TAACACCACGCACGACCCGGCGCTGCCTAAGTATTTAGTCGCAGAACCGA
TGTCGCTTCAAGTGGTCGTCACTCGGTTGTTGTGGCCGCTCGCTCGGGGT
CCCGAAGTTAGCAGCGAGCACTTCTCCTGTCGTGTAGGATAGACTCCGGA
GATTCGTAGTAGGACAGCGGTGGTCCCGGCTGACAAGTCAGCCGCGCCCT
GGGCGAAAGAACGAGAACTTTGCTTAAGCGATCACGAACATGATGTGGGT
GTAGGTATGGTTCTGAGAGATACATGTATTGTATTGTCAACCGCTCCTCC
GTCCGCCCTCGCCGCGAACCCCGACGTTTTTTTGTTTCCAGGCGGGATGA
GAAATTTCCTCATCATCTTGGTCCTCATTGCCATCCTGGCCGTTCTCGTT
GTCCTCGTGCTCTACACATGA
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Coding sequence (CDS) from alignment at chr_27:5825603..5832173-

>Ec-27_006300.1 ID=Ec-27_006300.1|Name=Ec-27_006300.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=453bp|location=Sequence derived from alignment at chr_27:5825603..5832173- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGAACGACTGGAAGGCTCCCATTGGCAGGGGCGCCGGAGGGGGCAGTAG
AAACTACGGGGGTCCAAATGGCACTGCGGAGAAAGTGGACTACTCGCGGT
TGCCGAACGAGGCTGGACCTGGCGATGATGGGGAGGGAGACGACTGGATA
CAGCGACAGATCAGAGGACACAAGAGCCAAATGGAGCACCAGGATGCACA
CTTGAGCGAGATTGGTCAGACGGCATCGCGTTTAGGGAACATCAGCTTGG
AGATATCGAAGGAATTGGATCAGCAGAACAAGATGCTGGAGAACGTGAAC
ACGGACTTTGAGGAGGCAATAGGAGGCCTTGACGCGGTCACGAAAAAGAC
GCAGGAGCTCATCAAGAAGTCAGGCGGGATGAGAAATTTCCTCATCATCT
TGGTCCTCATTGCCATCCTGGCCGTTCTCGTTGTCCTCGTGCTCTACACA
TGA
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Synonyms
The feature 'Ec-27_006300.1' has the following synonyms
Synonym
Esi0000_0043
Esi_0000_0043