Ec-27_006290.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-27_006290.1
Unique NameEc-27_006290.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length771
Homology
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BLAST of Ec-27_006290.1 vs. uniprot
Match: D8LAV2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAV2_ECTSI)

HSP 1 Score: 1261 bits (3264), Expect = 0.000e+0
Identity = 770/770 (100.00%), Postives = 770/770 (100.00%), Query Frame = 1 
Query:    1 MTEPVDPSIAGSAGPSDVALEERTASRSKGPNRTGVEPTTHPAPPKGSTNEPAGRGPPAPTAAPPARTPRVELPHSEQTMAAALVAPSVVTQSTPAATVPPRAASRSRSPPRSPPPTAVRGSTAXXXXXXXXXXXXXXPAYLAAGVLPFCVLGGDLLFLLGQQLRFHSRVRGRSFPEMGGGSTTPVAAEDEGRVASAAARQLPPSIETTPLPSGAPXXXXXXTPVWRPRRGPRAKVSLSLSPGSSGSAXXXXXXXXXXXXXXXXXXXXXXXXXXXQASRETAAKVEEAAPSASFPVAGASRDGTEHGMQTGARGARAGGGAPMGGGEFGMAGKRSEMVALAVQENDLEAATDSPCGAGDPSAAHGAAVKNGPRSGGINPEDGSSNTAVLPEEDPPAATGDPHPPVEETAAAPGQGTVPAGLLWSDFGGAREASDADAEETASREFAEESFGIFHGVRLESDSVARSQATMSSALRDPSLRGKRVFECRNGGYVMFVAEVDFVPDLMINLARKEIVGEDGSGPDAVGVQGECWGSGQGQASSPGFSEKTDFAWVPASVLLRAMRESRNRSTRKVVVKLGGCRYLRLFHKFVISLWGLDLAAVIQAASTPLQGRRASLPRPRTLLVKSNAEPISRCDSNQDETGGESSDGATSAERCAAIRGIDCVRPSFLSGRKRTSLGIIDGRRDRRWDRRRQGRSGERRRRNRERIRATLNGGGGDAGDGPRSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARVPSTAVPPEA 2310
            MTEPVDPSIAGSAGPSDVALEERTASRSKGPNRTGVEPTTHPAPPKGSTNEPAGRGPPAPTAAPPARTPRVELPHSEQTMAAALVAPSVVTQSTPAATVPPRAASRSRSPPRSPPPTAVRGSTAXXXXXXXXXXXXXXPAYLAAGVLPFCVLGGDLLFLLGQQLRFHSRVRGRSFPEMGGGSTTPVAAEDEGRVASAAARQLPPSIETTPLPSGAPXXXXXXTPVWRPRRGPRAKVSLSLSPGSSGSAXXXXXXXXXXXXXXXXXXXXXXXXXXXQASRETAAKVEEAAPSASFPVAGASRDGTEHGMQTGARGARAGGGAPMGGGEFGMAGKRSEMVALAVQENDLEAATDSPCGAGDPSAAHGAAVKNGPRSGGINPEDGSSNTAVLPEEDPPAATGDPHPPVEETAAAPGQGTVPAGLLWSDFGGAREASDADAEETASREFAEESFGIFHGVRLESDSVARSQATMSSALRDPSLRGKRVFECRNGGYVMFVAEVDFVPDLMINLARKEIVGEDGSGPDAVGVQGECWGSGQGQASSPGFSEKTDFAWVPASVLLRAMRESRNRSTRKVVVKLGGCRYLRLFHKFVISLWGLDLAAVIQAASTPLQGRRASLPRPRTLLVKSNAEPISRCDSNQDETGGESSDGATSAERCAAIRGIDCVRPSFLSGRKRTSLGIIDGRRDRRWDRRRQGRSGERRRRNRERIRATLNGGGGDAGDGPRSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARVPSTAVPPEA
Sbjct:    1 MTEPVDPSIAGSAGPSDVALEERTASRSKGPNRTGVEPTTHPAPPKGSTNEPAGRGPPAPTAAPPARTPRVELPHSEQTMAAALVAPSVVTQSTPAATVPPRAASRSRSPPRSPPPTAVRGSTAXXXXXXXXXXXXXXPAYLAAGVLPFCVLGGDLLFLLGQQLRFHSRVRGRSFPEMGGGSTTPVAAEDEGRVASAAARQLPPSIETTPLPSGAPXXXXXXTPVWRPRRGPRAKVSLSLSPGSSGSAXXXXXXXXXXXXXXXXXXXXXXXXXXXQASRETAAKVEEAAPSASFPVAGASRDGTEHGMQTGARGARAGGGAPMGGGEFGMAGKRSEMVALAVQENDLEAATDSPCGAGDPSAAHGAAVKNGPRSGGINPEDGSSNTAVLPEEDPPAATGDPHPPVEETAAAPGQGTVPAGLLWSDFGGAREASDADAEETASREFAEESFGIFHGVRLESDSVARSQATMSSALRDPSLRGKRVFECRNGGYVMFVAEVDFVPDLMINLARKEIVGEDGSGPDAVGVQGECWGSGQGQASSPGFSEKTDFAWVPASVLLRAMRESRNRSTRKVVVKLGGCRYLRLFHKFVISLWGLDLAAVIQAASTPLQGRRASLPRPRTLLVKSNAEPISRCDSNQDETGGESSDGATSAERCAAIRGIDCVRPSFLSGRKRTSLGIIDGRRDRRWDRRRQGRSGERRRRNRERIRATLNGGGGDAGDGPRSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARVPSTAVPPEA 770
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BLAST of Ec-27_006290.1 vs. uniprot
Match: A0A6H5JSG8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSG8_9PHAE)

HSP 1 Score: 939 bits (2426), Expect = 0.000e+0
Identity = 568/696 (81.61%), Postives = 587/696 (84.34%), Query Frame = 1 
Query:    1 MTEPVDPSIAGSAGPSDVALEERTASRSKGPNRTGVEPTTHPAPPKGSTNEPAGRGPPAPTAAPPARTPRVELPHSEQTMAAALVA-PSVVTQSTPAATVPPRAASRSRSPPRSPPPTAVRGSTAXXXXXXXXXXXXXXPAYLAAGVLPFCVLGGDLLFLLGQQLRFHSRVRGRSFPEMGGGSTTPVAAEDEGRVASAAARQLPPSIETTPLPSGAPXXXXXXTPVWRPRRGPRAKVSLSLSPGSSGSAXXXXXXXXXXXXXXXXXXXXXXXXXXXQASRETAAKVEEAAPSASFPVAGASRDGTEHGMQTGARGARAGGGAPMGGGEFGMAGKRSEMVALAVQENDLEAATDSPCGAGDPSAAHGAAVKNGPRSGGINPEDGSSNTAVLPEEDPPAAT-GDPHPPVEETAAAPGQGTVPAGLLWSDFGGAREASDADAEETASREFAEESFGIFHGVRLESDSVARSQATMSSALRDPSLRGKRVFECRNGGYVMFVAEVDFVPDLMINLARKEIVGEDGSGPDAVGVQGECWGSGQGQASSPGFSEKTDFAWVPASVLLRAMRESRNRSTRKVVVKLGGCRYLRLFHK-----FVISLWGLDLAAVIQAASTPLQGRRASLPRPRTLLVKSNAEPISRCDSNQDETGGESSDGATSAERCAAIRGIDCVRPSFLSGRKRTSLGIIDGRRDRRWD 2067
            MTEPVDPSIAGS+GP DV LEER+ASRSKGP+RTG+EPTTH APPKGSTNEPAGRGPP PTAAPPARTP VELPHS QT AAAL+A PS VTQSTP A VP RAASRSRSPPR PPPTAV  STA              PAYLAAGVLPFCVLGGDLLFLLGQQLRF SRVRGRSFP MGGGSTT                QLP S+ETTPL SG  XXXXXX                          XXXXXXXXXXXXXXXXXXXXXXXXX  Q SRETAAKVEEAAP++ F +AGAS DGTEH MQTG   ARAGGGAP GGG+FG+AGKRSEM A+AVQENDLEAATDSP GAGDPSA HG AVKNGPRSGG NPEDGSSNTA+LPEEDPPAA+ GDPHPPVEETAAAPGQGTVP GLLWSDFGGA+EA DADAEETASREFAEESFGIFHGVRLESDSVARSQATMSSALRDPSLRGKRVFECRNGGYVMFVAEVDFVPDLMINLARKEIVGED SG DAVGVQGE  GSGQGQASSPGFSEKTDFAWVPASVLLRAMRESRNRSTRKVVVKLGGCRYLRLFHK     FVISLWGLDLAAVIQAASTP+ GR ASLPRPR LLVKSNAEPISR DSN+D+TGGESSDGATSAE+CAAIRGIDCVRPSFLSGRKRTSLGIIDGRRDRRWD
Sbjct:    1 MTEPVDPSIAGSSGPPDVTLEERSASRSKGPDRTGMEPTTHAAPPKGSTNEPAGRGPPVPTAAPPARTPPVELPHSVQTTAAALIAAPSTVTQSTPTAMVPLRAASRSRSPPRPPPPTAVWRSTAPPPTCVATPSPPAPPAYLAAGVLPFCVLGGDLLFLLGQQLRFRSRVRGRSFPAMGGGSTTSAXXXXXXXXXXXXXXQLPLSMETTPLTSGXXXXXXXXXXXXXXXXXXXXXXXXXXXX----XXXXXXXXXXXXXXXXXXXXXXXXXXXGAQVSRETAAKVEEAAPASPFQLAGASTDGTEHVMQTGVCRARAGGGAPTGGGDFGIAGKRSEMAAVAVQENDLEAATDSPSGAGDPSALHGTAVKNGPRSGGSNPEDGSSNTALLPEEDPPAASIGDPHPPVEETAAAPGQGTVPVGLLWSDFGGAKEAGDADAEETASREFAEESFGIFHGVRLESDSVARSQATMSSALRDPSLRGKRVFECRNGGYVMFVAEVDFVPDLMINLARKEIVGEDDSGSDAVGVQGEHGGSGQGQASSPGFSEKTDFAWVPASVLLRAMRESRNRSTRKVVVKLGGCRYLRLFHKASRFSFVISLWGLDLAAVIQAASTPVHGRAASLPRPRILLVKSNAEPISRRDSNRDQTGGESSDGATSAEQCAAIRGIDCVRPSFLSGRKRTSLGIIDGRRDRRWD 692
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BLAST of Ec-27_006290.1 vs. uniprot
Match: A0A7S3XND0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XND0_HETAK)

HSP 1 Score: 94.0 bits (232), Expect = 1.420e-16
Identity = 53/102 (51.96%), Postives = 66/102 (64.71%), Query Frame = 1 
Query: 1258 GLLWSDFGGAREASDADA-EETASREFAEESFGIFHGVRLESDSVARSQATMSSALRDPSLRGKRVFECRNGGYVMFVAEVDFVPDLMINLARKEIVGEDGS 1560
            GLLWSDFGG +E  D +  E TASREFAEE+FG+F G+      V +S   M + L D    GK VF+  NG YVMF+A V FV DLM+NLAR++   E G+
Sbjct:   52 GLLWSDFGGKKEPQDQEIPERTASREFAEETFGMFGGLGGSEKIVQKSAEEMLNTLLDKEKEGKEVFKIINGQYVMFLAPVTFVDDLMLNLAREQWQQEHGN 153
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BLAST of Ec-27_006290.1 vs. uniprot
Match: A0A8J9S0U8_9CHLO (Uncharacterized protein n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9S0U8_9CHLO)

HSP 1 Score: 86.7 bits (213), Expect = 3.950e-15
Identity = 71/222 (31.98%), Postives = 101/222 (45.50%), Query Frame = 1 
Query: 1264 LWSDFGGAREASDADAEETASREFAEESFGIFHGVRLESDSVARSQATMSSALRDPSLRGKRVFECRNGGYVMFVAEVDFVPDLMINLARKEIVGEDGSGPDAVGVQGECWGSGQGQASSPGFSEKTDFAWVPASVLLRAMRESRNRSTRKVVVKLGGC-----------RYLRLFHKFVISL---WGLDLAAVIQAASTPLQGRRASLPRPRTLLVKSNAE 1887
            +W DFGG+REA D+D ++TASREFAEE+ G+F    ++S SVA SQ  M++ LRD     + V + + G Y MF+A + F+  LM  LA ++         +   V G               +EKT FAWV    LL A     +    K  + + G            R L L   F  SL    G  L  ++ AA   +Q  +   PR   L  +  A+
Sbjct:   56 MWKDFGGSREAIDSDVQDTASREFAEETLGMFASQNVDSASVAASQVLMAAQLRDQRHSLEVVHKLKKGQYSMFIALLPFLDPLMFYLAMRQ-------NAETQAVTG---------------AEKTAFAWVRLDQLLAATARCASAYFLKSSLSVSGTVDGRRPVSHGGRRLMLHPCFASSLRLAQGAGLRKLVAAARKSVQALQQPAPRLLPLAAQPPAD 255
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BLAST of Ec-27_006290.1 vs. uniprot
Match: A0A7S3VJL3_DUNTE (Hypothetical protein n=2 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3VJL3_DUNTE)

HSP 1 Score: 78.6 bits (192), Expect = 3.540e-11
Identity = 40/93 (43.01%), Postives = 58/93 (62.37%), Query Frame = 1 
Query: 1261 LLWSDFGGAREASDADAEETASREFAEESFGIFHGVRLESDSVARSQATMSSALRDPSLRGKRVFECRNGGYVMFVAEVDFVPDLMINLARKE 1539
            ++WSDFGG REA+DAD+ ETASREFAEE+ G+F GV ++  +V RS   M++ LR        V + R G Y M+   V ++  +   LA ++
Sbjct:   52 IMWSDFGGKREAADADSIETASREFAEETLGVFGGVSVDPAAVKRSADEMAARLRSGDRSLCSVHQLRKGAYHMYACMVTYIDPIFFELAMQQ 144
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BLAST of Ec-27_006290.1 vs. uniprot
Match: A0A5J4XWS7_9CHLO (Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XWS7_9CHLO)

HSP 1 Score: 72.0 bits (175), Expect = 1.100e-10
Identity = 52/137 (37.96%), Postives = 67/137 (48.91%), Query Frame = 1 
Query: 1273 DFGGAREASDADAEETASREFAEESFGIFHGVRLESDSVARSQATMSSALRDPSLRGKRVFECRNGGYVMFVAEVDFVPDLMINLARKEIVGEDGSGPDAVGVQGECWGSGQGQASSPGFSEKTDFAWVPASVLLRA 1683
            DFGG REA D D+E TASREFAEE+ G+F G  +   SVA     M + L       K V + + G Y M+VA+   +  LM++LA ++    D        V G               +EKT FAWV  S LL A
Sbjct:   19 DFGGQREAIDPDSETTASREFAEETMGLFGGCEVNGSSVAACSRQMRTQLIQRQHVLKVVHQLKKGEYHMYVAQTPHIDPLMLHLALQQNAETDA-------VDG---------------AEKTAFAWVALSDLLAA 133
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BLAST of Ec-27_006290.1 vs. uniprot
Match: A0A7S2UYN6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYN6_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 3.460e-10
Identity = 32/60 (53.33%), Postives = 42/60 (70.00%), Query Frame = 1 
Query: 1633 SEKTDFAWVPASVLLRAMRESRNRSTRKVVVKLGGCRYLRLFHKFVISLWGLDLAAVIQA 1812
            +EK DFAWVPA  L + +R  R++S R V +++G CR  RLFHKFV SL+ LDL  V+ A
Sbjct:   10 AEKVDFAWVPARDLAQELRRCRHKSRRGVCLRMGRCRVFRLFHKFVFSLYSLDLEQVLDA 69
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BLAST of Ec-27_006290.1 vs. uniprot
Match: A0A061QTB2_9CHLO (Uncharacterized protein n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061QTB2_9CHLO)

HSP 1 Score: 70.9 bits (172), Expect = 1.410e-9
Identity = 56/148 (37.84%), Postives = 74/148 (50.00%), Query Frame = 1 
Query: 1264 LWSDFGGAREASD-ADAEETASREFAEESFGIFHGVRLESDSVARSQATMSSALRDPSLRGKRVFECRNGGYVMFVAEVDFVPDLMINLARKEIVGEDGSGPDAVGVQGECWGSGQGQASSPGFSEKTDFAWVPASVLLRAMRESRNR 1704
            +W DFGG REASD  D+  TASREF+EE+ G+F    ++  SVA S   MS  LR       R  + + G Y  FVA   +V  L ++LA  ++  E G       V+G               +EKT FAWVP   LL A+ E+  R
Sbjct:   62 MWGDFGGHREASDDGDSVYTASREFSEETLGMFSSALVDPSSVADSTREMSLILRSRDAMQVR-HKLKKGEYHFFVARTAYVEPLYLHLAA-QLNRETGM------VEG---------------AEKTAFAWVPLGELLLAVSEAGRR 186
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BLAST of Ec-27_006290.1 vs. uniprot
Match: A0A7S0E5L3_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E5L3_9CRYP)

HSP 1 Score: 66.2 bits (160), Expect = 1.040e-7
Identity = 53/162 (32.72%), Postives = 73/162 (45.06%), Query Frame = 1 
Query: 1267 WSDFGGAREASDADAEETASREFAEESFGIFHGVRLESDSVARSQATMSSALRDPSLRG------------------KRVFECRNGGYVMFVAEVDFVPDLMINLARKEIVGEDGSGPDAVGVQGECWGSGQGQASSPGFSEKTDFAWVPASVLLRAMRESR 1698
            WSDFGG RE  + DAEETA REF+EE+ G++ G+      V  S A +   L D S R                   KRVF  +NG Y+ F   + ++  L+  LAR E    D   P A      C             +EK D+AW+ A  +LR + + +
Sbjct:   78 WSDFGGKREDFE-DAEETALREFSEETLGLWGGMGGLEQRVQASVANVRRILNDCSARCAGREEEREAERRAPGNQLKRVFVMKNGSYLTFFLPLPYIDPLLFQLARDE---NDKLVPGAERDSDTCR-----------CAEKRDWAWLDAEEVLRGVEKGK 224
The following BLAST results are available for this feature:
BLAST of Ec-27_006290.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D8LAV2_ECTSI0.000e+0100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JSG8_9PHAE0.000e+081.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3XND0_HETAK1.420e-1651.96Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A8J9S0U8_9CHLO3.950e-1531.98Uncharacterized protein n=1 Tax=Coccomyxa sp. Obi ... [more]
A0A7S3VJL3_DUNTE3.540e-1143.01Hypothetical protein n=2 Tax=Dunaliella tertiolect... [more]
A0A5J4XWS7_9CHLO1.100e-1037.96Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2... [more]
A0A7S2UYN6_9STRA3.460e-1053.33Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A061QTB2_9CHLO1.410e-937.84Uncharacterized protein n=1 Tax=Tetraselmis sp. GS... [more]
A0A7S0E5L3_9CRYP1.040e-732.72Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_27contigchr_27:5819713..5823825 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score78.2
Seed ortholog evalue1.9e-11
Seed eggNOG ortholog3075.A0A087SF01
Length2313
Hectar predicted targeting categoryother localisation
Gene idEc-27_006290.1
EggNOG OGs2EZKH@1,2T0WV@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-27_006290Ec-27_006290Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_27 5819713..5823825 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_006290.1Ec-27_006290.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_27 5819713..5823825 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_006290.1.1Ec-27_006290.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5819713..5819743 +
Ec-27_006290.1.2Ec-27_006290.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5820067..5820653 +
Ec-27_006290.1.3Ec-27_006290.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5821108..5821890 +
Ec-27_006290.1.4Ec-27_006290.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5822329..5822536 +
Ec-27_006290.1.5Ec-27_006290.1.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5822816..5822970 +
Ec-27_006290.1.6Ec-27_006290.1.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5823277..5823825 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_006290.1CDS:Ec-27_006290.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_27 5819713..5819743 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-27_006290.1 ID=Ec-27_006290.1|Name=Ec-27_006290.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=771bp
MTEPVDPSIAGSAGPSDVALEERTASRSKGPNRTGVEPTTHPAPPKGSTN
EPAGRGPPAPTAAPPARTPRVELPHSEQTMAAALVAPSVVTQSTPAATVP
PRAASRSRSPPRSPPPTAVRGSTAPPPPCVAAPSPPAPPAYLAAGVLPFC
VLGGDLLFLLGQQLRFHSRVRGRSFPEMGGGSTTPVAAEDEGRVASAAAR
QLPPSIETTPLPSGAPPPPPPPTPVWRPRRGPRAKVSLSLSPGSSGSASS
GHPPGDASPSPPAVAGAAAAAAAGAQASRETAAKVEEAAPSASFPVAGAS
RDGTEHGMQTGARGARAGGGAPMGGGEFGMAGKRSEMVALAVQENDLEAA
TDSPCGAGDPSAAHGAAVKNGPRSGGINPEDGSSNTAVLPEEDPPAATGD
PHPPVEETAAAPGQGTVPAGLLWSDFGGAREASDADAEETASREFAEESF
GIFHGVRLESDSVARSQATMSSALRDPSLRGKRVFECRNGGYVMFVAEVD
FVPDLMINLARKEIVGEDGSGPDAVGVQGECWGSGQGQASSPGFSEKTDF
AWVPASVLLRAMRESRNRSTRKVVVKLGGCRYLRLFHKFVISLWGLDLAA
VIQAASTPLQGRRASLPRPRTLLVKSNAEPISRCDSNQDETGGESSDGAT
SAERCAAIRGIDCVRPSFLSGRKRTSLGIIDGRRDRRWDRRRQGRSGERR
RRNRERIRATLNGGGGDAGDGPRSGRSRKSGAACRKRRRQCKQARRLKAA
AMAEAAEAARVPSTAVPPEA*
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spliced messenger RNA

>Ec-27_006290.1 ID=Ec-27_006290.1|Name=Ec-27_006290.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=2313bp|location=Sequence derived from alignment at chr_27:5819713..5823825+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGACAGAGCCCGTCGATCCAAGCATAGCAGGGTCGGCAGGCCCATCGGA
CGTTGCCCTTGAGGAACGAACTGCATCACGATCCAAGGGCCCAAATCGGA
CGGGCGTAGAACCGACCACACATCCAGCGCCGCCGAAGGGCAGCACAAAT
GAACCAGCGGGGCGTGGACCCCCGGCGCCAACGGCAGCGCCACCGGCTCG
AACACCACGAGTAGAACTGCCGCACTCCGAACAAACTATGGCAGCAGCGT
TAGTAGCGCCGTCGGTGGTAACACAATCAACGCCAGCGGCGACGGTACCA
CCGCGGGCGGCCTCGCGCTCCCGGTCTCCGCCACGGTCGCCTCCGCCGAC
CGCCGTTCGCGGGAGCACTGCGCCACCCCCACCCTGCGTCGCTGCCCCTT
CGCCACCCGCGCCGCCGGCTTACCTGGCGGCGGGGGTCCTTCCCTTCTGT
GTCCTCGGAGGGGATCTCCTGTTCCTGCTGGGCCAGCAGCTTCGCTTCCA
CTCCCGAGTCAGAGGCAGGTCGTTTCCAGAGATGGGCGGCGGTTCAACAA
CCCCGGTGGCAGCGGAGGACGAGGGCCGGGTCGCGAGCGCAGCGGCGAGA
CAATTACCGCCGAGCATCGAAACTACACCGCTGCCGTCGGGGGCGCCGCC
GCCGCCGCCACCACCGACGCCGGTCTGGAGACCGCGACGAGGCCCGCGGG
CGAAGGTCTCTCTGTCGCTCTCGCCGGGCTCTTCGGGCTCTGCGTCGTCT
GGGCACCCGCCGGGCGACGCCTCGCCGTCGCCGCCAGCAGTGGCAGGAGC
AGCAGCAGCAGCGGCAGCCGGGGCTCAAGCGAGTCGGGAAACGGCGGCGA
AGGTCGAGGAGGCCGCGCCGTCAGCATCGTTCCCGGTGGCTGGCGCTAGT
AGGGACGGGACGGAGCACGGTATGCAGACAGGAGCGCGTGGGGCACGGGC
AGGGGGGGGCGCGCCCATGGGTGGTGGCGAGTTCGGGATGGCAGGCAAAC
GCTCAGAGATGGTGGCGTTGGCGGTGCAGGAGAACGACTTGGAAGCTGCG
ACGGATTCACCATGTGGGGCAGGTGACCCGTCTGCCGCACACGGCGCAGC
AGTCAAAAACGGGCCAAGATCCGGCGGTATTAACCCCGAAGACGGGTCTT
CCAACACCGCCGTACTGCCCGAGGAGGATCCTCCCGCAGCTACCGGGGAC
CCGCACCCGCCGGTGGAGGAGACGGCGGCCGCGCCCGGGCAGGGGACCGT
GCCGGCTGGCCTGCTGTGGTCGGATTTCGGGGGTGCGAGAGAGGCGAGTG
ACGCGGACGCTGAGGAAACGGCGAGCCGGGAGTTTGCGGAGGAGAGCTTC
GGGATTTTCCACGGGGTTAGGCTGGAGAGCGACAGCGTGGCTCGCAGCCA
GGCGACAATGTCGTCCGCTCTGCGGGACCCCTCCCTGCGAGGCAAGCGCG
TTTTCGAGTGCCGCAACGGCGGCTACGTGATGTTTGTCGCCGAGGTCGAC
TTCGTGCCGGACCTGATGATCAACCTCGCGCGCAAGGAGATCGTTGGAGA
GGACGGCAGCGGTCCAGATGCCGTCGGTGTCCAGGGTGAATGCTGGGGAA
GCGGTCAAGGTCAAGCGTCTTCTCCGGGTTTCAGCGAGAAGACCGACTTC
GCCTGGGTGCCGGCGTCCGTTCTTCTGAGGGCGATGCGTGAAAGCAGGAA
CCGCTCGACGAGGAAGGTCGTGGTGAAGCTAGGGGGCTGCCGCTACCTCC
GGCTTTTTCACAAGTTCGTCATTTCCCTGTGGGGCTTAGACCTCGCGGCC
GTCATCCAGGCAGCGTCGACCCCTCTGCAAGGCCGCAGGGCGTCGCTGCC
CCGTCCCCGCACCCTTCTCGTAAAGTCGAACGCGGAGCCCATCTCTCGTT
GCGACAGCAACCAAGACGAGACCGGCGGGGAGAGCAGCGACGGCGCAACC
TCTGCGGAACGGTGCGCCGCCATCCGCGGCATAGACTGCGTCCGGCCCTC
GTTCCTTTCCGGTCGCAAGCGGACAAGCCTCGGCATTATTGACGGGCGCC
GTGATCGCAGGTGGGACAGGCGGCGTCAGGGGCGCAGCGGGGAGCGAAGA
CGGCGAAACCGGGAGCGAATTCGGGCGACGTTAAACGGCGGTGGTGGTGA
TGCCGGGGACGGTCCGCGCAGCGGCCGCTCGAGGAAAAGCGGGGCCGCCT
GCCGCAAGAGAAGACGGCAGTGCAAGCAGGCGAGGCGCTTGAAGGCGGCC
GCAATGGCGGAGGCGGCGGAAGCAGCGCGGGTGCCATCCACGGCGGTACC
CCCCGAGGCGTAG
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protein sequence of Ec-27_006290.1

>Ec-27_006290.1 ID=Ec-27_006290.1|Name=Ec-27_006290.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=771bp
MTEPVDPSIAGSAGPSDVALEERTASRSKGPNRTGVEPTTHPAPPKGSTN
EPAGRGPPAPTAAPPARTPRVELPHSEQTMAAALVAPSVVTQSTPAATVP
PRAASRSRSPPRSPPPTAVRGSTAPPPPCVAAPSPPAPPAYLAAGVLPFC
VLGGDLLFLLGQQLRFHSRVRGRSFPEMGGGSTTPVAAEDEGRVASAAAR
QLPPSIETTPLPSGAPPPPPPPTPVWRPRRGPRAKVSLSLSPGSSGSASS
GHPPGDASPSPPAVAGAAAAAAAGAQASRETAAKVEEAAPSASFPVAGAS
RDGTEHGMQTGARGARAGGGAPMGGGEFGMAGKRSEMVALAVQENDLEAA
TDSPCGAGDPSAAHGAAVKNGPRSGGINPEDGSSNTAVLPEEDPPAATGD
PHPPVEETAAAPGQGTVPAGLLWSDFGGAREASDADAEETASREFAEESF
GIFHGVRLESDSVARSQATMSSALRDPSLRGKRVFECRNGGYVMFVAEVD
FVPDLMINLARKEIVGEDGSGPDAVGVQGECWGSGQGQASSPGFSEKTDF
AWVPASVLLRAMRESRNRSTRKVVVKLGGCRYLRLFHKFVISLWGLDLAA
VIQAASTPLQGRRASLPRPRTLLVKSNAEPISRCDSNQDETGGESSDGAT
SAERCAAIRGIDCVRPSFLSGRKRTSLGIIDGRRDRRWDRRRQGRSGERR
RRNRERIRATLNGGGGDAGDGPRSGRSRKSGAACRKRRRQCKQARRLKAA
AMAEAAEAARVPSTAVPPEA*
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mRNA from alignment at chr_27:5819713..5823825+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-27_006290.1 ID=Ec-27_006290.1|Name=Ec-27_006290.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=4113bp|location=Sequence derived from alignment at chr_27:5819713..5823825+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGACAGAGCCCGTCGATCCAAGCATAGCAGGTGGGTGCCGACATGACGC
GTCGTGATCGTTCCCCTTTAGAGCCACATCGGTTTTAGTTGTGGTTGTAG
TGGTGGTTGTACACCTCGGTACCTCCGGCAGTTGTGCCGTCATGTTCTTT
GCACCCCACTCGCCCTACGCGCGCGAATCGTGCACCCCCCCCCCCCCCGA
ACCAACCGGTAGCCACCCTGCTTCGAGCATTCTCCACCCGAGGTGTGCGA
GATCTTACTTGTTTCTTTTGGTTTCCTCCGAAGCCTGCGTTTAACCCGAT
AAATTGCAACACCGTTCGACGGAACACAAACACCCCGTGCATGAAAAAAC
GCAGGGTCGGCAGGCCCATCGGACGTTGCCCTTGAGGAACGAACTGCATC
ACGATCCAAGGGCCCAAATCGGACGGGCGTAGAACCGACCACACATCCAG
CGCCGCCGAAGGGCAGCACAAATGAACCAGCGGGGCGTGGACCCCCGGCG
CCAACGGCAGCGCCACCGGCTCGAACACCACGAGTAGAACTGCCGCACTC
CGAACAAACTATGGCAGCAGCGTTAGTAGCGCCGTCGGTGGTAACACAAT
CAACGCCAGCGGCGACGGTACCACCGCGGGCGGCCTCGCGCTCCCGGTCT
CCGCCACGGTCGCCTCCGCCGACCGCCGTTCGCGGGAGCACTGCGCCACC
CCCACCCTGCGTCGCTGCCCCTTCGCCACCCGCGCCGCCGGCTTACCTGG
CGGCGGGGGTCCTTCCCTTCTGTGTCCTCGGAGGGGATCTCCTGTTCCTG
CTGGGCCAGCAGCTTCGCTTCCACTCCCGAGTCAGAGGCAGGTCGTTTCC
AGAGATGGGCGGCGGTTCAACAACCCCGGTGGCAGCGGAGGACGAGGGCC
GGGTCGCGAGCGCAGCGGCGAGACAATTACCGCCGAGCATCGTGAGTCTG
CTCGAGATGTTGGGTACGTAGGGTGTGTTTTTTTTTGTCCGGTCTGAGGC
GAATGGATGCCTTAGGAACAGAGGGCATGAGACACAGGGCCAGGGTGAGA
CCACAGGAGAACGCCGTGTTGACGTCCTACCGAATATTACCGATGCTTGT
CTGTGCTTTTTGCCCAGGCCCGCTTTGTCCCACGCAAGTGCAGAGCACCA
CACTAGTTTGCGGTGCCCGTTAACGGCGAACCCCTCGATTAACCTCCTGA
CGGCACTGGAAGCGTAGTTGTCACTGTTGCCGTTCCGGAGCAGCACCCCT
CGCGTTCTCGGCTCAGCTTCCTGTCCCTAACCCCGACGCGCCCTGTCCCT
ATCCCCGATCCCCTACGCGCACCCGACAACACCCCCTGTGACGACCCCCG
AAAACCGTTTCTGTGGGGGTACATACGCACACACTCGGCGGGCAGGAAAC
TACACCGCTGCCGTCGGGGGCGCCGCCGCCGCCGCCACCACCGACGCCGG
TCTGGAGACCGCGACGAGGCCCGCGGGCGAAGGTCTCTCTGTCGCTCTCG
CCGGGCTCTTCGGGCTCTGCGTCGTCTGGGCACCCGCCGGGCGACGCCTC
GCCGTCGCCGCCAGCAGTGGCAGGAGCAGCAGCAGCAGCGGCAGCCGGGG
CTCAAGCGAGTCGGGAAACGGCGGCGAAGGTCGAGGAGGCCGCGCCGTCA
GCATCGTTCCCGGTGGCTGGCGCTAGTAGGGACGGGACGGAGCACGGTAT
GCAGACAGGAGCGCGTGGGGCACGGGCAGGGGGGGGCGCGCCCATGGGTG
GTGGCGAGTTCGGGATGGCAGGCAAACGCTCAGAGATGGTGGCGTTGGCG
GTGCAGGAGAACGACTTGGAAGCTGCGACGGATTCACCATGTGGGGCAGG
TGACCCGTCTGCCGCACACGGCGCAGCAGTCAAAAACGGGCCAAGATCCG
GCGGTATTAACCCCGAAGACGGGTCTTCCAACACCGCCGTACTGCCCGAG
GAGGATCCTCCCGCAGCTACCGGGGACCCGCACCCGCCGGTGGAGGAGAC
GGCGGCCGCGCCCGGGCAGGGGACCGTGCCGGCTGGCCTGCTGTGGTCGG
ATTTCGGGGGTGCGAGAGAGGCGAGTGACGCGGACGCTGAGGAAACGGCG
AGCCGGGAGTTTGCGGAGGAGAGCTTCGGGATTTTCCACGGGGTTAGGCT
GGAGAGCGACAGCGTGGCTCGCAGCCAGGTGAGCTTTGCTGGATGGTCCA
TTTTGGGCGAGGTTGAGTCCGGTGTGCGCACGTGGCTGTTGAGGTTTAGC
CGCACGTCTTCGCTTGGATGGGTTCGACAACAACACTCGTCTGGGTACAT
ATAGTAGCACGGAAGGGAGAGGACGTTTCGTGTGAGGCGCGACCTCTATT
CCCACATCCTGTGGTCGTCTGGGTTGCGTAGTTTTTGGCACACTGCTGCT
GCTCTGGCCCCGTCCATCCCGTTTCCACTTTTCTCTCGCTTGCCAGCACC
TCTACTGCTGTGGCTGCAAATGAGGATTCGCAAGCAGTAAAATAATGAGG
ATTCGACTGGTGCCGCTGGAAACCAATGATACGTGAAAGCGTTGATGGTA
GTATATAAACATTTGCACTTGATGCCAACCCTATCTCACGTTTAACCCCC
CCTCCCCCCCCCCCAGGCGACAATGTCGTCCGCTCTGCGGGACCCCTCCC
TGCGAGGCAAGCGCGTTTTCGAGTGCCGCAACGGCGGCTACGTGATGTTT
GTCGCCGAGGTCGACTTCGTGCCGGACCTGATGATCAACCTCGCGCGCAA
GGAGATCGTTGGAGAGGACGGCAGCGGTCCAGATGCCGTCGGTGTCCAGG
GTGAATGCTGGGGAAGCGGTCAAGGTACATCACCCTCCCGCGGGAGGCTC
AATCACATTCGTGGTGTTACATGTTCTTACTCTTGAGCACGTCGGTAGGC
AGCGTTAGTGGTGGTTGTGGTTTCGTTGCAGCAAGGCTGACGCTTTAGAG
TGCCCTTTGGCCGAGAGCTCAATGTCCGAGCCTTAATTTTCGTGATAGCA
TCTCCCGTGCATGTCCGATAGGGTTTTAACCAAGATACTTATCGCACCAG
AAAACACCCGCTGCTGGTATATGTACTGGTGATATACAACCTTTTTTTTG
CAGGTCAAGCGTCTTCTCCGGGTTTCAGCGAGAAGACCGACTTCGCCTGG
GTGCCGGCGTCCGTTCTTCTGAGGGCGATGCGTGAAAGCAGGAACCGCTC
GACGAGGAAGGTCGTGGTGAAGCTAGGGGGCTGCCGCTACCTCCGGCTTT
TTCACAAGGCGAGTCGTTTCTCCTTGGACCAGCTACTGTAGTACGCCACG
CTATTTTGGAGGCGAACTGCCGTGCACACTACTATTGCTGCTGTTGCTGA
ACTTTTAGGCATCGCTGCTCTCGCTTGGCGTCAAAAGTGTTACTACTGTT
GCGCGTTTTCGTTGGATTAACACCTCTTAAAGGAAACCCGCTCGAGCTTG
CCGTGCCGACTCTTTAGCACCAGCTAAACCTTGACCTGCCCCCCCCCCCC
CCCCCATCGTACTCGATCCCACGCATCGTTTCTCTAACGGAAATCGCTTC
CCGACAACAAGCAGTTCGTCATTTCCCTGTGGGGCTTAGACCTCGCGGCC
GTCATCCAGGCAGCGTCGACCCCTCTGCAAGGCCGCAGGGCGTCGCTGCC
CCGTCCCCGCACCCTTCTCGTAAAGTCGAACGCGGAGCCCATCTCTCGTT
GCGACAGCAACCAAGACGAGACCGGCGGGGAGAGCAGCGACGGCGCAACC
TCTGCGGAACGGTGCGCCGCCATCCGCGGCATAGACTGCGTCCGGCCCTC
GTTCCTTTCCGGTCGCAAGCGGACAAGCCTCGGCATTATTGACGGGCGCC
GTGATCGCAGGTGGGACAGGCGGCGTCAGGGGCGCAGCGGGGAGCGAAGA
CGGCGAAACCGGGAGCGAATTCGGGCGACGTTAAACGGCGGTGGTGGTGA
TGCCGGGGACGGTCCGCGCAGCGGCCGCTCGAGGAAAAGCGGGGCCGCCT
GCCGCAAGAGAAGACGGCAGTGCAAGCAGGCGAGGCGCTTGAAGGCGGCC
GCAATGGCGGAGGCGGCGGAAGCAGCGCGGGTGCCATCCACGGCGGTACC
CCCCGAGGCGTAG
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Coding sequence (CDS) from alignment at chr_27:5819713..5823825+

>Ec-27_006290.1 ID=Ec-27_006290.1|Name=Ec-27_006290.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=2313bp|location=Sequence derived from alignment at chr_27:5819713..5823825+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGACAGAGCCCGTCGATCCAAGCATAGCAGGGTCGGCAGGCCCATCGGA
CGTTGCCCTTGAGGAACGAACTGCATCACGATCCAAGGGCCCAAATCGGA
CGGGCGTAGAACCGACCACACATCCAGCGCCGCCGAAGGGCAGCACAAAT
GAACCAGCGGGGCGTGGACCCCCGGCGCCAACGGCAGCGCCACCGGCTCG
AACACCACGAGTAGAACTGCCGCACTCCGAACAAACTATGGCAGCAGCGT
TAGTAGCGCCGTCGGTGGTAACACAATCAACGCCAGCGGCGACGGTACCA
CCGCGGGCGGCCTCGCGCTCCCGGTCTCCGCCACGGTCGCCTCCGCCGAC
CGCCGTTCGCGGGAGCACTGCGCCACCCCCACCCTGCGTCGCTGCCCCTT
CGCCACCCGCGCCGCCGGCTTACCTGGCGGCGGGGGTCCTTCCCTTCTGT
GTCCTCGGAGGGGATCTCCTGTTCCTGCTGGGCCAGCAGCTTCGCTTCCA
CTCCCGAGTCAGAGGCAGGTCGTTTCCAGAGATGGGCGGCGGTTCAACAA
CCCCGGTGGCAGCGGAGGACGAGGGCCGGGTCGCGAGCGCAGCGGCGAGA
CAATTACCGCCGAGCATCGAAACTACACCGCTGCCGTCGGGGGCGCCGCC
GCCGCCGCCACCACCGACGCCGGTCTGGAGACCGCGACGAGGCCCGCGGG
CGAAGGTCTCTCTGTCGCTCTCGCCGGGCTCTTCGGGCTCTGCGTCGTCT
GGGCACCCGCCGGGCGACGCCTCGCCGTCGCCGCCAGCAGTGGCAGGAGC
AGCAGCAGCAGCGGCAGCCGGGGCTCAAGCGAGTCGGGAAACGGCGGCGA
AGGTCGAGGAGGCCGCGCCGTCAGCATCGTTCCCGGTGGCTGGCGCTAGT
AGGGACGGGACGGAGCACGGTATGCAGACAGGAGCGCGTGGGGCACGGGC
AGGGGGGGGCGCGCCCATGGGTGGTGGCGAGTTCGGGATGGCAGGCAAAC
GCTCAGAGATGGTGGCGTTGGCGGTGCAGGAGAACGACTTGGAAGCTGCG
ACGGATTCACCATGTGGGGCAGGTGACCCGTCTGCCGCACACGGCGCAGC
AGTCAAAAACGGGCCAAGATCCGGCGGTATTAACCCCGAAGACGGGTCTT
CCAACACCGCCGTACTGCCCGAGGAGGATCCTCCCGCAGCTACCGGGGAC
CCGCACCCGCCGGTGGAGGAGACGGCGGCCGCGCCCGGGCAGGGGACCGT
GCCGGCTGGCCTGCTGTGGTCGGATTTCGGGGGTGCGAGAGAGGCGAGTG
ACGCGGACGCTGAGGAAACGGCGAGCCGGGAGTTTGCGGAGGAGAGCTTC
GGGATTTTCCACGGGGTTAGGCTGGAGAGCGACAGCGTGGCTCGCAGCCA
GGCGACAATGTCGTCCGCTCTGCGGGACCCCTCCCTGCGAGGCAAGCGCG
TTTTCGAGTGCCGCAACGGCGGCTACGTGATGTTTGTCGCCGAGGTCGAC
TTCGTGCCGGACCTGATGATCAACCTCGCGCGCAAGGAGATCGTTGGAGA
GGACGGCAGCGGTCCAGATGCCGTCGGTGTCCAGGGTGAATGCTGGGGAA
GCGGTCAAGGTCAAGCGTCTTCTCCGGGTTTCAGCGAGAAGACCGACTTC
GCCTGGGTGCCGGCGTCCGTTCTTCTGAGGGCGATGCGTGAAAGCAGGAA
CCGCTCGACGAGGAAGGTCGTGGTGAAGCTAGGGGGCTGCCGCTACCTCC
GGCTTTTTCACAAGTTCGTCATTTCCCTGTGGGGCTTAGACCTCGCGGCC
GTCATCCAGGCAGCGTCGACCCCTCTGCAAGGCCGCAGGGCGTCGCTGCC
CCGTCCCCGCACCCTTCTCGTAAAGTCGAACGCGGAGCCCATCTCTCGTT
GCGACAGCAACCAAGACGAGACCGGCGGGGAGAGCAGCGACGGCGCAACC
TCTGCGGAACGGTGCGCCGCCATCCGCGGCATAGACTGCGTCCGGCCCTC
GTTCCTTTCCGGTCGCAAGCGGACAAGCCTCGGCATTATTGACGGGCGCC
GTGATCGCAGGTGGGACAGGCGGCGTCAGGGGCGCAGCGGGGAGCGAAGA
CGGCGAAACCGGGAGCGAATTCGGGCGACGTTAAACGGCGGTGGTGGTGA
TGCCGGGGACGGTCCGCGCAGCGGCCGCTCGAGGAAAAGCGGGGCCGCCT
GCCGCAAGAGAAGACGGCAGTGCAAGCAGGCGAGGCGCTTGAAGGCGGCC
GCAATGGCGGAGGCGGCGGAAGCAGCGCGGGTGCCATCCACGGCGGTACC
CCCCGAGGCGTAG
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Synonyms
The feature 'Ec-27_006290.1' has the following synonyms
Synonym
Esi0000_0044
Esi_0000_0044