Ec-27_006240.2 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-27_006240.2
Unique NameEc-27_006240.2
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length247
Homology
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BLAST of Ec-27_006240.2 vs. uniprot
Match: D8LAV9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAV9_ECTSI)

HSP 1 Score: 330 bits (847), Expect = 4.970e-103
Identity = 169/182 (92.86%), Postives = 170/182 (93.41%), Query Frame = -3 
Query: 1886 MFLRDPWDKEFRLFPVPPEQPPQAGLSTTDATADAAPXXXXXXXAGSITSELTSPHGNVLVDVGFWADPRDSGDKRPDPAQLVDEEWGGTVEAVAVALYVRSGFLESFELGYSFCRFGCCGDGSAAQTSARDSKRRSWFSAIGGNGGRCGGGAPEQRRGPKGSKFMAALL*PMASTCGRKAW 2431
            MFLRDPWDKEFRLFPVPPEQPPQAGLSTTDATADAAPXXXXXXXAGSITSELTSPHGNVLVDVGFWADPRDSGDKRPDPAQLVDEEWGGTVEAVAVALYVRSGFLESFELGYSFCRFGCCGDGSAAQTSARDSKRRSWFSAIGGNGGRCGGGAPEQRRGPKGSKFM         T G+  W
Sbjct:    1 MFLRDPWDKEFRLFPVPPEQPPQAGLSTTDATADAAPXXXXXXXAGSITSELTSPHGNVLVDVGFWADPRDSGDKRPDPAQLVDEEWGGTVEAVAVALYVRSGFLESFELGYSFCRFGCCGDGSAAQTSARDSKRRSWFSAIGGNGGRCGGGAPEQRRGPKGSKFMGCTT----LTDGKYVW 178
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BLAST of Ec-27_006240.2 vs. uniprot
Match: D8LAV8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LAV8_ECTSI)

HSP 1 Score: 116 bits (290), Expect = 1.610e-26
Identity = 80/154 (51.95%), Postives = 89/154 (57.79%), Query Frame = 2 
Query:  131 MRVRSRSALKRFNPKQARETQAERNEAREF*KAAPWTWSLCN--WPTRPEPPLSSS*RTAGAPRRNRSRISPSSGENRKGWLYPGLPRHQERPHPNSHHR-----QEGDRGHEAFTSDLSKVCQGGKVEARGGELRIEGDHATNVKRWLSGLGF 571
            MRVRSRSALKRFNPKQARETQAERNEAR   ++ P         +P R  P           P  ++  +        KG   P       R   N   R     ++     +AFTSDLSKVCQGGKVEARGGELRIEGDHATNVKRWLSGLGF
Sbjct:    1 MRVRSRSALKRFNPKQARETQAERNEARRILESGPVDLESLQLAYPPRTTPEFVLKNGWCPPPE-SKPDLPFQVARTGKGGFIPVY-----RDIKNGRTRTVTIVKKATGDMKAFTSDLSKVCQGGKVEARGGELRIEGDHATNVKRWLSGLGF 148
[Close]
BLAST of Ec-27_006240.2 vs. uniprot
Match: UPI001C04AAEC (hypothetical protein n=1 Tax=Pimelobacter sp. 30-1 TaxID=2004991 RepID=UPI001C04AAEC)

HSP 1 Score: 63.5 bits (153), Expect = 2.160e-8
Identity = 28/58 (48.28%), Postives = 38/58 (65.52%), Query Frame = -2 
Query: 1764 HGCTTLTDGKYVWPEGLAHYIEEHAVRPPDDFVTFSLRNLRALREAQAGGRLHWEVDE 1937
            +G    TDG YVWPEGLAHY+++H VR P +FV  +LR  R L EA++   + W + E
Sbjct:   63 NGALDFTDGTYVWPEGLAHYVDDHDVRLPGEFVEHALRRQRELEEAESS--VEWWLRE 118
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BLAST of Ec-27_006240.2 vs. uniprot
Match: A0A1G6ZX66_9ACTN (Uncharacterized protein n=1 Tax=Nocardioides lianchengensis TaxID=1045774 RepID=A0A1G6ZX66_9ACTN)

HSP 1 Score: 60.5 bits (145), Expect = 2.780e-7
Identity = 26/48 (54.17%), Postives = 32/48 (66.67%), Query Frame = -2 
Query: 1794 HGCTTLTDGKYVWPEGLAHYIEEHAVRPPDDFVTFSLRNLRALREAQA 1937
            +G    TDG YVWPEGLAHYI+EHAVR PD  V  +   L A+ + +A
Sbjct:   65 NGVVEYTDGTYVWPEGLAHYIDEHAVRLPDVLVAHARERLNAVEDREA 112
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BLAST of Ec-27_006240.2 vs. uniprot
Match: W4GN93_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GN93_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 2.890e-7
Identity = 36/110 (32.73%), Postives = 52/110 (47.27%), Query Frame = -2 
Query: 1608 GCTTLTDGKYVWPEGLAHYIEEHAVRPPDDFVTFSLRNLRA-LREAQAGGRLHWEVDERGRGRMARLSPGTAVFLKDNTTLGIALPPEPEVRKTPSGGSREEEQRCSCML 1934
            G  T+TDG Y WPEG  HY+E+H V PP DFV   L+++ A +        + W+ + RG      + P     +  NTTL I  P             ++ +Q+ SC L
Sbjct:   72 GACTMTDGMYCWPEGYVHYLEQHHVVPPADFVEHVLQHVAAAVARPPTPFLVMWDYESRG---PVPMPPTMQHMILANTTLTIGQP-------------QQAQQQASCAL 165
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BLAST of Ec-27_006240.2 vs. uniprot
Match: A0A2M9KVG5_9ACTN (Uncharacterized protein n=2 Tax=Kitasatospora TaxID=2063 RepID=A0A2M9KVG5_9ACTN)

HSP 1 Score: 59.3 bits (142), Expect = 8.770e-7
Identity = 25/45 (55.56%), Postives = 32/45 (71.11%), Query Frame = -2 
Query: 1809 QVHGCTTLTDGKYVWPEGLAHYIEEHAVRPPDDFVTFSLRNLRAL 1943
            +V+G   LTDG Y+WP GL HY+EEHAVR P +FV  ++  L AL
Sbjct:   61 RVNGNAELTDGTYLWPSGLGHYVEEHAVRLPAEFVRHAVDRLDAL 105
[Close]
BLAST of Ec-27_006240.2 vs. uniprot
Match: UPI000415E2C1 (hypothetical protein n=1 Tax=Propionicicella superfundia TaxID=348582 RepID=UPI000415E2C1)

HSP 1 Score: 58.2 bits (139), Expect = 1.230e-6
Identity = 25/43 (58.14%), Postives = 29/43 (67.44%), Query Frame = -2 
Query: 1809 HGCTTLTDGKYVWPEGLAHYIEEHAVRPPDDFVTFSLRNLRAL 1937
            +G    TDG YVWPEGLAHYI +HAVR P+D V  + R L  L
Sbjct:   50 NGAAEYTDGTYVWPEGLAHYIYDHAVRLPEDLVRHARRRLDTL 92
[Close]
BLAST of Ec-27_006240.2 vs. uniprot
Match: A0A485KNH7_9STRA (Aste57867_9691 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KNH7_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 1.340e-6
Identity = 32/85 (37.65%), Postives = 44/85 (51.76%), Query Frame = -2 
Query: 1689 QVHGCTTLTDGKYVWPEGLAHYIEEHAVRPPDDFVTFSLRNLRALREAQAGGRLHWEVDERGRGRMARLSPGTAVFLKDNTTLGI 1943
            +V G  TLTDG Y WPEG AHY+E+H VRPP+ F+   L        A   G L W+  E+   +  ++       +  NTTL +
Sbjct:   69 KVMGACTLTDGVYCWPEGYAHYLEQHHVRPPEVFLAHVLSRP-VPSTAPKSGLLMWDFTEK---QPVQMPAAMQEMVLANTTLTL 149
[Close]
BLAST of Ec-27_006240.2 vs. uniprot
Match: UPI0018DEF711 (hypothetical protein n=1 Tax=Streptomyces fildesensis TaxID=375757 RepID=UPI0018DEF711)

HSP 1 Score: 58.2 bits (139), Expect = 1.580e-6
Identity = 24/49 (48.98%), Postives = 33/49 (67.35%), Query Frame = -2 
Query: 1797 QVHGCTTLTDGKYVWPEGLAHYIEEHAVRPPDDFVTFSLRNLRALREAQ 1943
            + +G   LTDG+++WP GL+HY+  HAVR P +FV    R L AL EA+
Sbjct:   60 EPNGNAELTDGEFIWPTGLSHYLTAHAVRLPSEFVMHVFRRLAALEEAK 108
[Close]
BLAST of Ec-27_006240.2 vs. uniprot
Match: A0A7G6X888_9ACTN (Uncharacterized protein n=1 Tax=Kribbella qitaiheensis TaxID=1544730 RepID=A0A7G6X888_9ACTN)

HSP 1 Score: 58.5 bits (140), Expect = 1.590e-6
Identity = 23/46 (50.00%), Postives = 32/46 (69.57%), Query Frame = -2 
Query: 1800 HGCTTLTDGKYVWPEGLAHYIEEHAVRPPDDFVTFSLRNLRALREA 1937
            +G   L+DG Y+WP+G AHY+  H VRPP+ F++ +L  L AL EA
Sbjct:   65 NGSLELSDGTYIWPDGFAHYVLHHDVRPPERFISHALSTLDALAEA 110
The following BLAST results are available for this feature:
BLAST of Ec-27_006240.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LAV9_ECTSI4.970e-10392.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LAV8_ECTSI1.610e-2651.95Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
UPI001C04AAEC2.160e-848.28hypothetical protein n=1 Tax=Pimelobacter sp. 30-1... [more]
A0A1G6ZX66_9ACTN2.780e-754.17Uncharacterized protein n=1 Tax=Nocardioides lianc... [more]
W4GN93_9STRA2.890e-732.73Uncharacterized protein n=5 Tax=Aphanomyces astaci... [more]
A0A2M9KVG5_9ACTN8.770e-755.56Uncharacterized protein n=2 Tax=Kitasatospora TaxI... [more]
UPI000415E2C11.230e-658.14hypothetical protein n=1 Tax=Propionicicella super... [more]
A0A485KNH7_9STRA1.340e-637.65Aste57867_9691 protein n=1 Tax=Aphanomyces stellat... [more]
UPI0018DEF7111.580e-648.98hypothetical protein n=1 Tax=Streptomyces fildesen... [more]
A0A7G6X888_9ACTN1.590e-650.00Uncharacterized protein n=1 Tax=Kribbella qitaihee... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_27contigchr_27:5777772..5783407 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Length2741
Hectar predicted targeting categoryother localisation
Gene idEc-27_006240.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-27_006240Ec-27_006240Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_27 5777772..5783407 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_006240.2Ec-27_006240.2Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_27 5777834..5778574 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_006240.2.4Ec-27_006240.2.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5777772..5780061 -
Ec-27_006240.2.3Ec-27_006240.2.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5780739..5780843 -
Ec-27_006240.2.2Ec-27_006240.2.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5782106..5782238 -
Ec-27_006240.2.1Ec-27_006240.2.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5783195..5783407 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_0062403UTR:Ec-27_006240.2Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_27 5777772..5777833 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_006240.2CDS:Ec-27_006240.2Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_27 5777834..5778574 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_0062405UTR:Ec-27_006240.2Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_27 5778575..5780061 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-27_006240.2 ID=Ec-27_006240.2|Name=Ec-27_006240.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=247bp
MNLLPFGPRRCSGAPPPQRPPLPPMAENQDLRLESLALVCAALPSPQQPN
LQNEYPSSKDSRKPERTYKATATASTVPPHSSSTSWAGSGRLSPLSLGSA
QKPTSTKTLPCGDVNSEVMLPAAEAPAVVGAASAVASVVDSPACGGCSGG
TGNSRNSLSQGSRRNIARPFDYARAPGYGRLSPMREATTCRRDGSFAAAA
ASAAATAAASASAAAFFSAALVKLRLLRSISSCFRLFSSAFFLIAS*
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spliced messenger RNA

>Ec-27_006240.2 ID=Ec-27_006240.2|Name=Ec-27_006240.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=2741bp|location=Sequence derived from alignment at chr_27:5777772..5783407- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
CGATCGATCGCTCCCCTGCCTGAGCTAGCCAGCCCTTCGCGTACACCACT
CCCCGTACTGCCTTTGGATAAGGTTATCGACCATGCAACGGAGTCCTTGT
GTGTTTCGTGTGGCCTCATCCCTCTGCCCCATGAGGGTGAGGTCGAGGAG
CGCCCTGAAGCGATTCAACCCCAAGCAAGCGAGAGAGACGCAAGCGGAGA
GGAACGAGGCGCGGCGAATTCTAGAAAGCGGCCCCGTGGACCTGGAGTCT
CTGCAACTGGCCTACCCGCCCCGAACCACCCCTGAGTTCGTCTTGAAGAA
CGGCTGGTGCCCCCCGCCGGAATCGAAGCCGGATCTCCCCTTCCAGGTGG
CGAGAACAGGAAAGGGTGGCTTTATCCCGGTTTACCGAGACATCAAGAAC
GGCCGCACCCGAACAGTCACCATCGTCAAGAAGGCGACAGGGGACATGAA
GGCGTTTACGTCCGATCTGTCCAAGGTCTGCCAGGGGGGTAAAGTAGAGG
CTAGGGGAGGGGAGCTGAGGATCGAGGGAGATCACGCGACGAACGTCAAG
AGATGGCTGTCCGGACTTGGTTTTTGAGCTCCAAGAGTAGAATTCGTAGG
TATGCATAGGCGGCGCGTTGTGTGGGCTGTCCTGGGGTGGGCGGGAGGTC
ATCACTGCTGCTGCTGCTGATGCTGCTTTGGAAGGTTGTACCCGACCTGG
CCGGGTCGCCCCCTGCCCTATCCCCTAAGACTTGCTGAGGGGCGGAGAGG
TACAACCGGCGGATGGCATGCAAAGAGACTGACTGTAACTACAGCTGCGT
GCACGACACCTTTCGCTGTTTTTTCCCGGCTTTTGAAGCTCGTGTTGAGC
ATTGCGAAGACTGAATTTCACCGCTGCGACGTGGTATGTTGATCCCTCGT
GGTGTCACCGAAGGGTCTCTGAATCCCCCGCGGGAGGCATTGCTTACCAC
AAGCCGAGAGGCTGTTTTCAAGAAGTAGCGCTGATTGCTTGTAGTGCTAC
ACTAGAGAGCTCGCGAATCCGCTCGCGAATCTTACTCGTTCTTACCCGTC
TTCAAAATCCTCAAAACACCCAAGGGGAACTACAACTGTACATTTGCTGA
GTCACGTATGGAAGCAGGACGAGTACGTTTCGGCCGCTGCTGATCGTGCC
AAATGATTTCGCCTCCCGCTACCAATCCCTGCAATGCGGGAAAAAATCGA
AAAGGCCATGTGATGACATCACATAGGCGAAGCAGCCTGGCTCAAAATAA
TATCCAATCACCAACCGTTCTCCTGTAGCTGGCTGTGCGCGACGCGGTCT
TGAAAACCAAAGCAGCGGTGCTCGTTTTTTGGGAGACCACAGCATCCGTG
TGGAGTATACAATACGCCCACAGGCCAACGTCACACACCACGACTTTTCA
CCAACATAAGCTTTCCCAAAACAGACATGCAAGATAAAACTCGAAGCACC
AGCTCCTCCATGCCAGCATCCACGTACTAGGGCAACGGCAGTTGCTGCCT
CACAAAAACACTACGCACGCTCAAAAACATTCTCACGAACACAGGAACAG
CAGTGACGACGCAAACAGGACAACCTTCGTCTCCGCTTTCCCTGCGGCCC
TTCACCGCGGTAGCATACACGAGCACCGCTGCTCCTCTTCACGGCTACCA
CCCGACGGTGTTTTTCGAACCTCAGGCTCGGGCGGCAGAGCTATGCCCAG
GGTGGTGTTATCCTTCAAAAACACCGCCGTCCCGGGTGAAAGCCGCGCCA
TCCGCCCCCTCCCCCTCTCATCCACCTCCCAGTGGAGCCGGCCTCCCGCC
TGAGCTTCCCGCAGCGCCCGGAGGTTTCGCAGAGAGAAGGTCACGAAGTC
GTCTGGGGGGCGCACCGCGTGCTCCTCTATGTAGTGCGCCAAGCCTTCCG
GCCACACGTACTTGCCATCGGTCAAAGTAGTGCAGCCCATGAACTTGCTG
CCTTTCGGACCACGGCGTTGTTCTGGCGCGCCACCACCGCAGCGGCCGCC
GTTGCCGCCGATGGCCGAAAACCAAGATCTACGCTTGGAGTCTCTGGCAC
TCGTTTGCGCAGCACTGCCGTCGCCGCAGCAGCCAAACCTACAGAACGAG
TACCCCAGCTCGAAGGACTCCAGGAAGCCAGAGCGGACGTACAAGGCAAC
GGCGACCGCCTCTACCGTGCCGCCCCACTCCTCGTCAACCAGCTGGGCCG
GGTCTGGTCGCTTGTCTCCGCTGTCCCTCGGGTCAGCCCAGAAGCCCACA
TCTACCAAGACATTGCCGTGTGGGGACGTCAACTCGGAGGTGATGCTACC
GGCAGCAGAAGCACCGGCAGTAGTCGGGGCGGCGTCAGCGGTAGCGTCGG
TCGTCGACAGTCCGGCCTGCGGCGGCTGCTCTGGCGGCACTGGGAACAGT
CGAAATTCTTTGTCCCAGGGGTCGCGAAGAAACATTGCTCGGCCGTTCGA
CTATGCGCGGGCACCCGGCTATGGGCGGTTGAGTCCGATGCGAGAGGCCA
CCACTTGCCGTCGAGATGGCTCCTTCGCGGCAGCCGCCGCCTCCGCGGCT
GCTACTGCCGCTGCTTCCGCCTCCGCGGCTGCTTTCTTCTCCGCCGCCTT
AGTCAAGTTGCGGTTGTTGCGTTCGATCTCCTCCTGTTTTCGCCTGTTCT
CTTCGGCTTTCTTCTTGATCGCCTCGTAGTCCTGAACGTCTTCGGTTGTG
AGCTCGATACGAGTGGGCTTCCGACGGAGCATGGTCTGCTG
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protein sequence of Ec-27_006240.2

>Ec-27_006240.2 ID=Ec-27_006240.2|Name=Ec-27_006240.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=247bp
MNLLPFGPRRCSGAPPPQRPPLPPMAENQDLRLESLALVCAALPSPQQPN
LQNEYPSSKDSRKPERTYKATATASTVPPHSSSTSWAGSGRLSPLSLGSA
QKPTSTKTLPCGDVNSEVMLPAAEAPAVVGAASAVASVVDSPACGGCSGG
TGNSRNSLSQGSRRNIARPFDYARAPGYGRLSPMREATTCRRDGSFAAAA
ASAAATAAASASAAAFFSAALVKLRLLRSISSCFRLFSSAFFLIAS*
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mRNA from alignment at chr_27:5777772..5783407-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-27_006240.2 ID=Ec-27_006240.2|Name=Ec-27_006240.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=5636bp|location=Sequence derived from alignment at chr_27:5777772..5783407- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
CGATCGATCGCTCCCCTGCCTGAGCTAGCCAGCCCTTCGCGTACACCACT
CCCCGTACTGCCTTTGGATAAGGTTATCGACCATGCAACGGAGTCCTTGT
GTGTTTCGTGTGGCCTCATCCCTCTGCCCCATGAGGGTGAGGTCGAGGAG
CGCCCTGAAGCGATTCAACCCCAAGCAAGCGAGAGAGACGCAAGCGGAGA
GGAACGAGGCGCGGTGAGACGAGCAAGCTAGCCGACGTTGCATACGCGTT
TTTATAGCTGGGTAGGTTTCTTGGCGAAATTCGTTATGTTAAGAGCTGCT
GGAAAGTCTTATGCGCCATGCTCTGCATCAGCATGCACCCTTTTTACGAC
CCCTCGGACCCTGCAGATACACAGGATTACTGCAGTGCGGAGTACAGTAG
AACATCCCTGTCGACTACAACTGCTGTTGATGCTGTGGGTGTTTCTATAC
GTGGGTGCTCAATCGAATGTTGCGTTGTCCAACAAGCAGGATTGTTTCGT
AAATGTAGATCTATGGACGCCTCTCCTTGCTGTTTCTGTGTTCGTGTTAG
AGTAGAACTGCTGTTGAGAGACGTCAGTGAAATCGAGTGATTTCATCTCA
AAATCAACTTTGGCGACATGTATACTCTTCGCCCGGCGGTGTGGTTCACC
TTTCACTTCTTGATGCTACAGCAGTATCATGTCATCCATGCTTTCGCGTC
TCTTGGAATGATCACGTGTTGGTTGACTAGAGGTTAGTTGCGGCCGCCTT
GCCTGTCCAGACAACTTGCGAACGTGGGCTATTCCTCAACAGCAGTTGCT
AACATTGAACGACACATGCATTACCTGAGGCAGGTCTTGGTTATCCCCCA
CCCGAAGGTGCAGATGTACACATGCCCATGAGCGAACCTACTCGGTGTGA
CAGTCACCATGACGAAAGTTGGTGATAATTCAAGCCAGGGACAAGCGATG
GAGATGATGTAGACCAAAGAAGTGTCCCCTCCCCGCGCCAGCCAAACCCG
TCTCCTTAGAATTGCCAAGCAAGCATCAGTGTTCTCAAAGGCATGTACAA
TCCAACAACCCCACGACCTCCTCCTTTGCCGGGTTACTGTTCATGGTGCA
TCGTACGGAACAGCACGTAGATATCTGTCAACGTTTTTCGAACCCTGGTG
CCCTTCTCCCCACCTCCAGGCGAATTCTAGAAAGCGGCCCCGTGGACCTG
GAGTCTCTGCAACTGGCCTACCCGCCCCGAACCACCCCTGAGTTCGTCTT
GAAGAACGGCTGGTGCCCCCCGCCGGAATCGAAGCCGGATCTCCCCTTCC
AGGTGTGTGCTTGGAAGCCGGTGTCGAGTGAGACTCGGCGGAGTGACGAT
GGCGTGCCTTGCGGGAAACCTCACGAGGCGTCCTTCGAAATATCGTGCCT
CCTGCCTCGATGGCTAGATATCAGCAGACATTTTCTTGCGGTGGAGCGTA
GTATCACCGCAGTAGGATTATCCACGAAGATATGATCCTCAAGGGGGCAT
GTTGAAGTCTTGATAGCAGTCGTGAAGATCCAGAGGTGGTGCCTGCTGGA
AACTGAGCTTAGTTGAGGTTTGTGTTGCGGAGAAAACTACTTTTTAATGG
TTTGCTTCTCGCGAATCTCGGGCCGGTGATGATGGCATTCTCCTCGCGCC
AGCGCACGCCCCGATGGACCTATGTGTCCCATCCTATGGCAGTAGTACTG
CGTGGAAGGAGACGGCTTCCTTGGGCGTATAGCCAAACCTAGTTTACTTT
ATAGAACTCAACTTGCATGTGTGCCCCCCCCCCCCCCCCCCCCAAACTCC
CCTTACTGGTGGGGGGGGGAAGGGGGGAAAAAAAGAAAAGGGGGGTTTTT
TCCCGGTTTCCCAAAAAATCAAAAAGGGCCCCCCCCAAAAAGCCCCCTCC
TCCAAAAAGGGAAAGGGGGAAATAAAGGGAACGGGGTTTTTTTTCGCCCT
GTTTTTTGGTTTCTGGCCCCCTTTAAAAGTTTTTGTTCCCCCGGTGGCAA
TTTGACCAACCCCCCTGGTGGTATTTCCCCCGGTCCATGTAAAAAAGGGC
CCGGGCCCTTTCTTTTTTTTATTTTTTTGCCAAGAAACCCGTTTTAAAAA
AAAAGGCCCCCCTTCGGTAATATATTTTCTGGTTAAACCCCCCCCGGACA
AAAAAAAAGGCAACCCTTCCCCCAAAATTTGGATTGGGNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGAAAAAAAA
TTTTGTTGGGTTTTTTGTTGGGGGAAAAAAAATTTTTTAATGGTTTGTTT
TTCCGGAATTTGGGGCCGGGGGATGGGGCTTTTTCCTCGGCCCGGGCCCC
CCCCCGAGGGACCTATTTGTCCCCTCCTTTGGCGGTATTTATGGGGGGAA
GGGGAGGGTTTCTTTGGGGGTAAACCCAAACCTATTTTTTTTTTTAAAAC
TCAATTGGCCTGGGGCCCCCCCCCCCCCCCCCCCCGACGCTCCTCTCACT
GCTGCGGTGGGAAGGTGGCGAGAACAGGAAAGGGTGGCTTTATCCCGGTT
TACCGAGACATCAAGAACGGCCGCACCCGAACAGTCACCATCGTCAAGAA
GGCGACAGGGGACATGAAGGTGAGCGGGTTCTTTTAGCGCCATGTTTTGT
GTTTACTGCCGCCATTGAACGTTCTTGCTACCGCTGCTGCTACTTGCACT
ACCTCCTCTGCTGTCATTCGCCCTGTCCATGTTACGAATGCGCCGTGCCA
GTTCGTTTATTTGATTCTTTGCAGATGACACCTGTTTAGAGTAGAAGGTC
CGCCTTCGGCTAGTATATTTCCTGTTGAATCGCACCCGGACGAAGAGAGA
GGCAACGCTTGCCGCAATACTTGGATTGAGTTCCCACAGCAGTTGTGAGC
TTGCCGATATTTTTCACGAAAGACGTGGGAGCAATACGGCGTCTGGCCAT
ATTTTGCTGAACCACACAAACCATCCATGTGCACTACGCCGTGAGTTTTT
TTTCGTACGGCCGATTGGAAAATTGTGGATTCTTCGCACGGAATATCCCT
CTTGTCCAGCTTGGCATTTTGCTGTGACTACCCCTGCAACCGCAACACCC
GCTGAGCGGTCCATGTAACGTGCACCAAACGTATAACCTGCAAAGGGGTT
AAGATCTGCAGGATGCATGCCCTTTGTCTGTGACGCAAACCATGCGTATC
GAACACCACTTAATTCGGGATGTGAGCCTGCTTCAACAACCCCTCCTTTT
CCTTTCACGCTGGACGCGTGCTGTGCGATGCCTTTTTCATTTGCAGGCGT
TTACGTCCGATCTGTCCAAGGTCTGCCAGGGGGGTAAAGTAGAGGCTAGG
GGAGGGGAGCTGAGGATCGAGGGAGATCACGCGACGAACGTCAAGAGATG
GCTGTCCGGACTTGGTTTTTGAGCTCCAAGAGTAGAATTCGTAGGTATGC
ATAGGCGGCGCGTTGTGTGGGCTGTCCTGGGGTGGGCGGGAGGTCATCAC
TGCTGCTGCTGCTGATGCTGCTTTGGAAGGTTGTACCCGACCTGGCCGGG
TCGCCCCCTGCCCTATCCCCTAAGACTTGCTGAGGGGCGGAGAGGTACAA
CCGGCGGATGGCATGCAAAGAGACTGACTGTAACTACAGCTGCGTGCACG
ACACCTTTCGCTGTTTTTTCCCGGCTTTTGAAGCTCGTGTTGAGCATTGC
GAAGACTGAATTTCACCGCTGCGACGTGGTATGTTGATCCCTCGTGGTGT
CACCGAAGGGTCTCTGAATCCCCCGCGGGAGGCATTGCTTACCACAAGCC
GAGAGGCTGTTTTCAAGAAGTAGCGCTGATTGCTTGTAGTGCTACACTAG
AGAGCTCGCGAATCCGCTCGCGAATCTTACTCGTTCTTACCCGTCTTCAA
AATCCTCAAAACACCCAAGGGGAACTACAACTGTACATTTGCTGAGTCAC
GTATGGAAGCAGGACGAGTACGTTTCGGCCGCTGCTGATCGTGCCAAATG
ATTTCGCCTCCCGCTACCAATCCCTGCAATGCGGGAAAAAATCGAAAAGG
CCATGTGATGACATCACATAGGCGAAGCAGCCTGGCTCAAAATAATATCC
AATCACCAACCGTTCTCCTGTAGCTGGCTGTGCGCGACGCGGTCTTGAAA
ACCAAAGCAGCGGTGCTCGTTTTTTGGGAGACCACAGCATCCGTGTGGAG
TATACAATACGCCCACAGGCCAACGTCACACACCACGACTTTTCACCAAC
ATAAGCTTTCCCAAAACAGACATGCAAGATAAAACTCGAAGCACCAGCTC
CTCCATGCCAGCATCCACGTACTAGGGCAACGGCAGTTGCTGCCTCACAA
AAACACTACGCACGCTCAAAAACATTCTCACGAACACAGGAACAGCAGTG
ACGACGCAAACAGGACAACCTTCGTCTCCGCTTTCCCTGCGGCCCTTCAC
CGCGGTAGCATACACGAGCACCGCTGCTCCTCTTCACGGCTACCACCCGA
CGGTGTTTTTCGAACCTCAGGCTCGGGCGGCAGAGCTATGCCCAGGGTGG
TGTTATCCTTCAAAAACACCGCCGTCCCGGGTGAAAGCCGCGCCATCCGC
CCCCTCCCCCTCTCATCCACCTCCCAGTGGAGCCGGCCTCCCGCCTGAGC
TTCCCGCAGCGCCCGGAGGTTTCGCAGAGAGAAGGTCACGAAGTCGTCTG
GGGGGCGCACCGCGTGCTCCTCTATGTAGTGCGCCAAGCCTTCCGGCCAC
ACGTACTTGCCATCGGTCAAAGTAGTGCAGCCCATGAACTTGCTGCCTTT
CGGACCACGGCGTTGTTCTGGCGCGCCACCACCGCAGCGGCCGCCGTTGC
CGCCGATGGCCGAAAACCAAGATCTACGCTTGGAGTCTCTGGCACTCGTT
TGCGCAGCACTGCCGTCGCCGCAGCAGCCAAACCTACAGAACGAGTACCC
CAGCTCGAAGGACTCCAGGAAGCCAGAGCGGACGTACAAGGCAACGGCGA
CCGCCTCTACCGTGCCGCCCCACTCCTCGTCAACCAGCTGGGCCGGGTCT
GGTCGCTTGTCTCCGCTGTCCCTCGGGTCAGCCCAGAAGCCCACATCTAC
CAAGACATTGCCGTGTGGGGACGTCAACTCGGAGGTGATGCTACCGGCAG
CAGAAGCACCGGCAGTAGTCGGGGCGGCGTCAGCGGTAGCGTCGGTCGTC
GACAGTCCGGCCTGCGGCGGCTGCTCTGGCGGCACTGGGAACAGTCGAAA
TTCTTTGTCCCAGGGGTCGCGAAGAAACATTGCTCGGCCGTTCGACTATG
CGCGGGCACCCGGCTATGGGCGGTTGAGTCCGATGCGAGAGGCCACCACT
TGCCGTCGAGATGGCTCCTTCGCGGCAGCCGCCGCCTCCGCGGCTGCTAC
TGCCGCTGCTTCCGCCTCCGCGGCTGCTTTCTTCTCCGCCGCCTTAGTCA
AGTTGCGGTTGTTGCGTTCGATCTCCTCCTGTTTTCGCCTGTTCTCTTCG
GCTTTCTTCTTGATCGCCTCGTAGTCCTGAACGTCTTCGGTTGTGAGCTC
GATACGAGTGGGCTTCCGACGGAGCATGGTCTGCTG
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Coding sequence (CDS) from alignment at chr_27:5777772..5783407-

>Ec-27_006240.2 ID=Ec-27_006240.2|Name=Ec-27_006240.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=741bp|location=Sequence derived from alignment at chr_27:5777772..5783407- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGAACTTGCTGCCTTTCGGACCACGGCGTTGTTCTGGCGCGCCACCACC
GCAGCGGCCGCCGTTGCCGCCGATGGCCGAAAACCAAGATCTACGCTTGG
AGTCTCTGGCACTCGTTTGCGCAGCACTGCCGTCGCCGCAGCAGCCAAAC
CTACAGAACGAGTACCCCAGCTCGAAGGACTCCAGGAAGCCAGAGCGGAC
GTACAAGGCAACGGCGACCGCCTCTACCGTGCCGCCCCACTCCTCGTCAA
CCAGCTGGGCCGGGTCTGGTCGCTTGTCTCCGCTGTCCCTCGGGTCAGCC
CAGAAGCCCACATCTACCAAGACATTGCCGTGTGGGGACGTCAACTCGGA
GGTGATGCTACCGGCAGCAGAAGCACCGGCAGTAGTCGGGGCGGCGTCAG
CGGTAGCGTCGGTCGTCGACAGTCCGGCCTGCGGCGGCTGCTCTGGCGGC
ACTGGGAACAGTCGAAATTCTTTGTCCCAGGGGTCGCGAAGAAACATTGC
TCGGCCGTTCGACTATGCGCGGGCACCCGGCTATGGGCGGTTGAGTCCGA
TGCGAGAGGCCACCACTTGCCGTCGAGATGGCTCCTTCGCGGCAGCCGCC
GCCTCCGCGGCTGCTACTGCCGCTGCTTCCGCCTCCGCGGCTGCTTTCTT
CTCCGCCGCCTTAGTCAAGTTGCGGTTGTTGCGTTCGATCTCCTCCTGTT
TTCGCCTGTTCTCTTCGGCTTTCTTCTTGATCGCCTCGTAG
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Synonyms
The feature 'Ec-27_006240.2' has the following synonyms
Synonym
Esi0000_0053
Esi_0000_0053