Ec-27_006240.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-27_006240.1
Unique NameEc-27_006240.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length149
Homology
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BLAST of Ec-27_006240.1 vs. uniprot
Match: D8LAV8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LAV8_ECTSI)

HSP 1 Score: 298 bits (762), Expect = 3.140e-102
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 1 
Query:    1 MRVRSRSALKRFNPKQARETQAERNEARRILESGPVDLESLQLAYPPRTTPEFVLKNGWCPPPESKPDLPFQVARTGKGGFIPVYRDIKNGRTRTVTIVKKATGDMKAFTSDLSKVCQGGKVEARGGELRIEGDHATNVKRWLSGLGF 444
            MRVRSRSALKRFNPKQARETQAERNEARRILESGPVDLESLQLAYPPRTTPEFVLKNGWCPPPESKPDLPFQVARTGKGGFIPVYRDIKNGRTRTVTIVKKATGDMKAFTSDLSKVCQGGKVEARGGELRIEGDHATNVKRWLSGLGF
Sbjct:    1 MRVRSRSALKRFNPKQARETQAERNEARRILESGPVDLESLQLAYPPRTTPEFVLKNGWCPPPESKPDLPFQVARTGKGGFIPVYRDIKNGRTRTVTIVKKATGDMKAFTSDLSKVCQGGKVEARGGELRIEGDHATNVKRWLSGLGF 148
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BLAST of Ec-27_006240.1 vs. uniprot
Match: A0A5D6Y004_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y004_9STRA)

HSP 1 Score: 122 bits (305), Expect = 1.350e-32
Identity = 61/114 (53.51%), Postives = 77/114 (67.54%), Query Frame = 1 
Query:  106 VDLESLQLAYPPRTTPEFVLKNGWCPPP-ESKPDLPFQVARTGKGGFIPVYRDIKNGRTRTVTIVKKATGDMKAFTSDLSKVCQGGKVEARGGELRIEGDHATNVKRWLSGLGF 444
            V+LE   L Y P   PE V  NGW PPP E  P LPF V RT  G  +PVYRDI+NGRTR +TI+++  GD +   ++LSKVC G +V AR G L + GDHA ++K+WL+GLGF
Sbjct:   42 VELEVPPLKYEPTYEPERVSFNGWSPPPAEPLPGLPFHVKRTAVGLQLPVYRDIRNGRTRVLTILRRYHGDEEELRTELSKVCLGKEVVARPGRLEVVGDHARDIKKWLTGLGF 155
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BLAST of Ec-27_006240.1 vs. uniprot
Match: A0A6A3EWI4_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3EWI4_9STRA)

HSP 1 Score: 112 bits (280), Expect = 7.880e-29
Identity = 53/107 (49.53%), Postives = 70/107 (65.42%), Query Frame = 1 
Query:  127 LAYPPRTTPEFVLKNGWCPPPESK-PDLPFQVARTGKGGFIPVYRDIKNGRTRTVTIVKKATGDMKAFTSDLSKVCQGGKVEARGGELRIEGDHATNVKRWLSGLGF 444
            L + P   PE V  NGW P PE+  P LPF V RT  G  +PVYRD +NGRTR +TI+++  GD      ++SKVCQG +V  R G L + GDHA+++++WL GLGF
Sbjct:   48 LKFEPSYVPEKVSFNGWSPAPEAPLPGLPFHVKRTAVGMQLPVYRDFRNGRTRVLTILRRYKGDELELRDEMSKVCQGKEVVVRPGRLEVVGDHASDIRKWLVGLGF 154
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BLAST of Ec-27_006240.1 vs. uniprot
Match: D0NCG0_PHYIT (Uncharacterized protein n=8 Tax=Peronosporaceae TaxID=4777 RepID=D0NCG0_PHYIT)

HSP 1 Score: 112 bits (279), Expect = 1.120e-28
Identity = 53/107 (49.53%), Postives = 70/107 (65.42%), Query Frame = 1 
Query:  127 LAYPPRTTPEFVLKNGWCPPPESK-PDLPFQVARTGKGGFIPVYRDIKNGRTRTVTIVKKATGDMKAFTSDLSKVCQGGKVEARGGELRIEGDHATNVKRWLSGLGF 444
            L Y P   PE V  NGW P PE+    LPF V RT  G  +PVYRD +NGRTR +TI+++  GD +    ++SKVCQG +V  R G L + GDHA+++++WL GLGF
Sbjct:   48 LKYEPTYVPEKVSFNGWSPAPEAPLSGLPFHVKRTATGMQLPVYRDFRNGRTRVLTILRRYKGDEQELRDEMSKVCQGKEVIVRPGRLEVVGDHASDIRKWLVGLGF 154
[Close]
BLAST of Ec-27_006240.1 vs. uniprot
Match: A0A0W8C9Q0_PHYNI (Uncharacterized protein n=7 Tax=Phytophthora TaxID=4783 RepID=A0A0W8C9Q0_PHYNI)

HSP 1 Score: 114 bits (285), Expect = 2.760e-28
Identity = 54/107 (50.47%), Postives = 71/107 (66.36%), Query Frame = 1 
Query:  127 LAYPPRTTPEFVLKNGWCPPPESK-PDLPFQVARTGKGGFIPVYRDIKNGRTRTVTIVKKATGDMKAFTSDLSKVCQGGKVEARGGELRIEGDHATNVKRWLSGLGF 444
            L Y P   PE V  NGW P PE+  P LPF V RT  G  +PVYRD +NGRTR +TI+++  GD +    ++SKVCQG +V  R G L + GDHA+++++WL GLGF
Sbjct:  168 LKYEPTYVPEKVSFNGWSPAPEAPLPGLPFHVKRTAVGLQLPVYRDFRNGRTRVLTILRRYKGDEQELRDEMSKVCQGKEVIVRPGRLEVVGDHASDIRKWLVGLGF 274
[Close]
BLAST of Ec-27_006240.1 vs. uniprot
Match: A0A8K1FRY2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FRY2_PYTOL)

HSP 1 Score: 110 bits (276), Expect = 3.160e-28
Identity = 55/113 (48.67%), Postives = 71/113 (62.83%), Query Frame = 1 
Query:  109 DLESLQLAYPPRTTPEFVLKNGWCPPPESK-PDLPFQVARTGKGGFIPVYRDIKNGRTRTVTIVKKATGDMKAFTSDLSKVCQGGKVEARGGELRIEGDHATNVKRWLSGLGF 444
            ++E   L Y P   PE V  NGW P PE   P+LPF V RT  G  +PVYRD +NGRTR +TI+++  GD     +++SK+C G  V  R G L + GDHA+ VK+WL GLGF
Sbjct:   42 EVEVPPLKYEPTYVPEKVSFNGWSPAPEQPLPNLPFFVKRTAVGLQLPVYRDYRNGRTRVLTILRRFNGDEGELQAEMSKICGGKDVVLRPGRLEVTGDHASEVKKWLVGLGF 154
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BLAST of Ec-27_006240.1 vs. uniprot
Match: A0A484E697_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E697_BRELC)

HSP 1 Score: 106 bits (264), Expect = 2.040e-26
Identity = 50/107 (46.73%), Postives = 68/107 (63.55%), Query Frame = 1 
Query:  127 LAYPPRTTPEFVLKNGWCPPPESK-PDLPFQVARTGKGGFIPVYRDIKNGRTRTVTIVKKATGDMKAFTSDLSKVCQGGKVEARGGELRIEGDHATNVKRWLSGLGF 444
            L Y P   PE V  NGW P PE+    LPF V RT  G  +PVYRD +NGRTR +TI+++  GD      ++SK+C+G +V  R G + + GDH ++V++WL GLGF
Sbjct:   48 LKYEPTYVPEKVSFNGWSPAPEAPLTGLPFHVKRTATGLQLPVYRDYRNGRTRVLTILRRYRGDEHELRDEMSKICEGKEVVIRPGRMEVVGDHFSDVRKWLVGLGF 154
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BLAST of Ec-27_006240.1 vs. uniprot
Match: W7U6S8_9STRA (Ribosomal protein L49/IMG2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U6S8_9STRA)

HSP 1 Score: 105 bits (262), Expect = 5.350e-26
Identity = 49/113 (43.36%), Postives = 71/113 (62.83%), Query Frame = 1 
Query:  127 LAYPPRTTPEFVLKNGWCPPPES------KPDLPFQVARTGKGGFIPVYRDIKNGRTRTVTIVKKATGDMKAFTSDLSKVCQGGKVEARGG-ELRIEGDHATNVKRWLSGLGF 444
            L YPP   P  VL NGW  PP+       K  LPFQV RT KG ++PVY D++ GRT+ +T+V+K +GD++    ++SKVC   +V  R G  L ++G +   +++WL+GLGF
Sbjct:   52 LKYPPTYQPSRVLPNGWSAPPDPATVGLPKTSLPFQVERTDKGRWLPVYTDVRKGRTQLITLVRKVSGDLEEMRGEMSKVCANQEVRIRTGPRLEVKGRYTAQLRQWLAGLGF 164
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BLAST of Ec-27_006240.1 vs. uniprot
Match: A0A7S3XRT8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XRT8_HETAK)

HSP 1 Score: 101 bits (251), Expect = 2.410e-24
Identity = 56/143 (39.16%), Postives = 77/143 (53.85%), Query Frame = 1 
Query:   70 RNEARRILESGPVDLESLQLAYPPRTTPEFV-----------------LKNGWCPPPESKPD-LPFQVARTGKGGFIPVYRDIKNGRTRTVTIVKKATGDMKAFTSDLSKVCQGGKVEARGGELRIEGDHATNVKRWLSGLGF 444
            RN+ +R+ +  PV L      +  +  PE V                 L NGW PPP + PD  PF V RT KG ++PVY DI+NGRT+T TIV++  GD +    DLS +  G +  AR G + + G+H   V+ WL+GLGF
Sbjct:   23 RNQVKRLFKKNPVALRHRTKYFGKQVPPEKVAEIPTELQFKPSQEPKALPNGWTPPPATVPDGYPFTVTRTLKGKWLPVYTDIRNGRTKTFTIVRRIEGDPEPLRRDLSALT-GARAVARAGRVEVPGNHVPRVRAWLAGLGF 164
[Close]
BLAST of Ec-27_006240.1 vs. uniprot
Match: A0A5A8CPU9_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CPU9_CAFRO)

HSP 1 Score: 95.5 bits (236), Expect = 1.530e-22
Identity = 43/93 (46.24%), Postives = 61/93 (65.59%), Query Frame = 1 
Query:  169 NGWCPPPESKPD-LPFQVARTGKGGFIPVYRDIKNGRTRTVTIVKKATGDMKAFTSDLSKVCQGGKVEARGGELRIEGDHATNVKRWLSGLGF 444
            +GW P   + P+ LPF V R G  G +PVYRDI++GRT+  T+V+K  GD +A   +L K+C+G  V  R G + ++GDH  +V R+LSGLG 
Sbjct:   33 HGWAPATGAVPETLPFAVDRAGPAGSLPVYRDIRHGRTKIYTVVRKIRGDTEAMAQELHKLCRGAPVTQRPGRIEVDGDHKLDVVRYLSGLGL 125
The following BLAST results are available for this feature:
BLAST of Ec-27_006240.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LAV8_ECTSI3.140e-102100.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A5D6Y004_9STRA1.350e-3253.51Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A6A3EWI4_9STRA7.880e-2949.53Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]
D0NCG0_PHYIT1.120e-2849.53Uncharacterized protein n=8 Tax=Peronosporaceae Ta... [more]
A0A0W8C9Q0_PHYNI2.760e-2850.47Uncharacterized protein n=7 Tax=Phytophthora TaxID... [more]
A0A8K1FRY2_PYTOL3.160e-2848.67Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A484E697_BRELC2.040e-2646.73Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
W7U6S8_9STRA5.350e-2643.36Ribosomal protein L49/IMG2 n=2 Tax=Monodopsidaceae... [more]
A0A7S3XRT8_HETAK2.410e-2439.16Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A5A8CPU9_CAFRO1.530e-2246.24Uncharacterized protein n=2 Tax=Cafeteria roenberg... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_27contigchr_27:5779936..5783277 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score298.1
Seed ortholog evalue2.2e-78
Seed eggNOG ortholog2880.D8LAV8
Length447
KEGG koko:K17430
Hectar predicted targeting categoryother localisation
Gene idEc-27_006240.1
EggNOG free text desc.Mitochondrial large subunit ribosomal protein (Img2)
EggNOG OGs2CXPQ@1,2RYXJ@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko03011
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-27_006240Ec-27_006240Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_27 5777772..5783407 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_006240.1.4Ec-27_006240.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5779936..5780061 -
Ec-27_006240.1.3Ec-27_006240.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5780739..5780843 -
Ec-27_006240.1.2Ec-27_006240.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5782106..5782238 -
Ec-27_006240.1.1Ec-27_006240.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5783195..5783277 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_006240.1CDS:Ec-27_006240.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_27 5779936..5780061 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_006240.1Ec-27_006240.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_27 5779936..5783277 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-27_006240.1 ID=Ec-27_006240.1|Name=Ec-27_006240.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=149bp
MRVRSRSALKRFNPKQARETQAERNEARRILESGPVDLESLQLAYPPRTT
PEFVLKNGWCPPPESKPDLPFQVARTGKGGFIPVYRDIKNGRTRTVTIVK
KATGDMKAFTSDLSKVCQGGKVEARGGELRIEGDHATNVKRWLSGLGF*
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spliced messenger RNA

>Ec-27_006240.1 ID=Ec-27_006240.1|Name=Ec-27_006240.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=447bp|location=Sequence derived from alignment at chr_27:5779936..5783277- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGAGGGTGAGGTCGAGGAGCGCCCTGAAGCGATTCAACCCCAAGCAAGC
GAGAGAGACGCAAGCGGAGAGGAACGAGGCGCGGCGAATTCTAGAAAGCG
GCCCCGTGGACCTGGAGTCTCTGCAACTGGCCTACCCGCCCCGAACCACC
CCTGAGTTCGTCTTGAAGAACGGCTGGTGCCCCCCGCCGGAATCGAAGCC
GGATCTCCCCTTCCAGGTGGCGAGAACAGGAAAGGGTGGCTTTATCCCGG
TTTACCGAGACATCAAGAACGGCCGCACCCGAACAGTCACCATCGTCAAG
AAGGCGACAGGGGACATGAAGGCGTTTACGTCCGATCTGTCCAAGGTCTG
CCAGGGGGGTAAAGTAGAGGCTAGGGGAGGGGAGCTGAGGATCGAGGGAG
ATCACGCGACGAACGTCAAGAGATGGCTGTCCGGACTTGGTTTTTGA
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protein sequence of Ec-27_006240.1

>Ec-27_006240.1 ID=Ec-27_006240.1|Name=Ec-27_006240.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=149bp
MRVRSRSALKRFNPKQARETQAERNEARRILESGPVDLESLQLAYPPRTT
PEFVLKNGWCPPPESKPDLPFQVARTGKGGFIPVYRDIKNGRTRTVTIVK
KATGDMKAFTSDLSKVCQGGKVEARGGELRIEGDHATNVKRWLSGLGF*
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mRNA from alignment at chr_27:5779936..5783277-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-27_006240.1 ID=Ec-27_006240.1|Name=Ec-27_006240.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=3342bp|location=Sequence derived from alignment at chr_27:5779936..5783277- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGAGGGTGAGGTCGAGGAGCGCCCTGAAGCGATTCAACCCCAAGCAAGC
GAGAGAGACGCAAGCGGAGAGGAACGAGGCGCGGTGAGACGAGCAAGCTA
GCCGACGTTGCATACGCGTTTTTATAGCTGGGTAGGTTTCTTGGCGAAAT
TCGTTATGTTAAGAGCTGCTGGAAAGTCTTATGCGCCATGCTCTGCATCA
GCATGCACCCTTTTTACGACCCCTCGGACCCTGCAGATACACAGGATTAC
TGCAGTGCGGAGTACAGTAGAACATCCCTGTCGACTACAACTGCTGTTGA
TGCTGTGGGTGTTTCTATACGTGGGTGCTCAATCGAATGTTGCGTTGTCC
AACAAGCAGGATTGTTTCGTAAATGTAGATCTATGGACGCCTCTCCTTGC
TGTTTCTGTGTTCGTGTTAGAGTAGAACTGCTGTTGAGAGACGTCAGTGA
AATCGAGTGATTTCATCTCAAAATCAACTTTGGCGACATGTATACTCTTC
GCCCGGCGGTGTGGTTCACCTTTCACTTCTTGATGCTACAGCAGTATCAT
GTCATCCATGCTTTCGCGTCTCTTGGAATGATCACGTGTTGGTTGACTAG
AGGTTAGTTGCGGCCGCCTTGCCTGTCCAGACAACTTGCGAACGTGGGCT
ATTCCTCAACAGCAGTTGCTAACATTGAACGACACATGCATTACCTGAGG
CAGGTCTTGGTTATCCCCCACCCGAAGGTGCAGATGTACACATGCCCATG
AGCGAACCTACTCGGTGTGACAGTCACCATGACGAAAGTTGGTGATAATT
CAAGCCAGGGACAAGCGATGGAGATGATGTAGACCAAAGAAGTGTCCCCT
CCCCGCGCCAGCCAAACCCGTCTCCTTAGAATTGCCAAGCAAGCATCAGT
GTTCTCAAAGGCATGTACAATCCAACAACCCCACGACCTCCTCCTTTGCC
GGGTTACTGTTCATGGTGCATCGTACGGAACAGCACGTAGATATCTGTCA
ACGTTTTTCGAACCCTGGTGCCCTTCTCCCCACCTCCAGGCGAATTCTAG
AAAGCGGCCCCGTGGACCTGGAGTCTCTGCAACTGGCCTACCCGCCCCGA
ACCACCCCTGAGTTCGTCTTGAAGAACGGCTGGTGCCCCCCGCCGGAATC
GAAGCCGGATCTCCCCTTCCAGGTGTGTGCTTGGAAGCCGGTGTCGAGTG
AGACTCGGCGGAGTGACGATGGCGTGCCTTGCGGGAAACCTCACGAGGCG
TCCTTCGAAATATCGTGCCTCCTGCCTCGATGGCTAGATATCAGCAGACA
TTTTCTTGCGGTGGAGCGTAGTATCACCGCAGTAGGATTATCCACGAAGA
TATGATCCTCAAGGGGGCATGTTGAAGTCTTGATAGCAGTCGTGAAGATC
CAGAGGTGGTGCCTGCTGGAAACTGAGCTTAGTTGAGGTTTGTGTTGCGG
AGAAAACTACTTTTTAATGGTTTGCTTCTCGCGAATCTCGGGCCGGTGAT
GATGGCATTCTCCTCGCGCCAGCGCACGCCCCGATGGACCTATGTGTCCC
ATCCTATGGCAGTAGTACTGCGTGGAAGGAGACGGCTTCCTTGGGCGTAT
AGCCAAACCTAGTTTACTTTATAGAACTCAACTTGCATGTGTGCCCCCCC
CCCCCCCCCCCCCAAACTCCCCTTACTGGTGGGGGGGGGAAGGGGGGAAA
AAAAGAAAAGGGGGGTTTTTTCCCGGTTTCCCAAAAAATCAAAAAGGGCC
CCCCCCAAAAAGCCCCCTCCTCCAAAAAGGGAAAGGGGGAAATAAAGGGA
ACGGGGTTTTTTTTCGCCCTGTTTTTTGGTTTCTGGCCCCCTTTAAAAGT
TTTTGTTCCCCCGGTGGCAATTTGACCAACCCCCCTGGTGGTATTTCCCC
CGGTCCATGTAAAAAAGGGCCCGGGCCCTTTCTTTTTTTTATTTTTTTGC
CAAGAAACCCGTTTTAAAAAAAAAGGCCCCCCTTCGGTAATATATTTTCT
GGTTAAACCCCCCCCGGACAAAAAAAAAGGCAACCCTTCCCCCAAAATTT
GGATTGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNGGGGAAAAAAAATTTTGTTGGGTTTTTTGTTGGGGGAAAAAA
AATTTTTTAATGGTTTGTTTTTCCGGAATTTGGGGCCGGGGGATGGGGCT
TTTTCCTCGGCCCGGGCCCCCCCCCGAGGGACCTATTTGTCCCCTCCTTT
GGCGGTATTTATGGGGGGAAGGGGAGGGTTTCTTTGGGGGTAAACCCAAA
CCTATTTTTTTTTTTAAAACTCAATTGGCCTGGGGCCCCCCCCCCCCCCC
CCCCCGACGCTCCTCTCACTGCTGCGGTGGGAAGGTGGCGAGAACAGGAA
AGGGTGGCTTTATCCCGGTTTACCGAGACATCAAGAACGGCCGCACCCGA
ACAGTCACCATCGTCAAGAAGGCGACAGGGGACATGAAGGTGAGCGGGTT
CTTTTAGCGCCATGTTTTGTGTTTACTGCCGCCATTGAACGTTCTTGCTA
CCGCTGCTGCTACTTGCACTACCTCCTCTGCTGTCATTCGCCCTGTCCAT
GTTACGAATGCGCCGTGCCAGTTCGTTTATTTGATTCTTTGCAGATGACA
CCTGTTTAGAGTAGAAGGTCCGCCTTCGGCTAGTATATTTCCTGTTGAAT
CGCACCCGGACGAAGAGAGAGGCAACGCTTGCCGCAATACTTGGATTGAG
TTCCCACAGCAGTTGTGAGCTTGCCGATATTTTTCACGAAAGACGTGGGA
GCAATACGGCGTCTGGCCATATTTTGCTGAACCACACAAACCATCCATGT
GCACTACGCCGTGAGTTTTTTTTCGTACGGCCGATTGGAAAATTGTGGAT
TCTTCGCACGGAATATCCCTCTTGTCCAGCTTGGCATTTTGCTGTGACTA
CCCCTGCAACCGCAACACCCGCTGAGCGGTCCATGTAACGTGCACCAAAC
GTATAACCTGCAAAGGGGTTAAGATCTGCAGGATGCATGCCCTTTGTCTG
TGACGCAAACCATGCGTATCGAACACCACTTAATTCGGGATGTGAGCCTG
CTTCAACAACCCCTCCTTTTCCTTTCACGCTGGACGCGTGCTGTGCGATG
CCTTTTTCATTTGCAGGCGTTTACGTCCGATCTGTCCAAGGTCTGCCAGG
GGGGTAAAGTAGAGGCTAGGGGAGGGGAGCTGAGGATCGAGGGAGATCAC
GCGACGAACGTCAAGAGATGGCTGTCCGGACTTGGTTTTTGA
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Coding sequence (CDS) from alignment at chr_27:5779936..5783277-

>Ec-27_006240.1 ID=Ec-27_006240.1|Name=Ec-27_006240.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=447bp|location=Sequence derived from alignment at chr_27:5779936..5783277- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGAGGGTGAGGTCGAGGAGCGCCCTGAAGCGATTCAACCCCAAGCAAGC
GAGAGAGACGCAAGCGGAGAGGAACGAGGCGCGGCGAATTCTAGAAAGCG
GCCCCGTGGACCTGGAGTCTCTGCAACTGGCCTACCCGCCCCGAACCACC
CCTGAGTTCGTCTTGAAGAACGGCTGGTGCCCCCCGCCGGAATCGAAGCC
GGATCTCCCCTTCCAGGTGGCGAGAACAGGAAAGGGTGGCTTTATCCCGG
TTTACCGAGACATCAAGAACGGCCGCACCCGAACAGTCACCATCGTCAAG
AAGGCGACAGGGGACATGAAGGCGTTTACGTCCGATCTGTCCAAGGTCTG
CCAGGGGGGTAAAGTAGAGGCTAGGGGAGGGGAGCTGAGGATCGAGGGAG
ATCACGCGACGAACGTCAAGAGATGGCTGTCCGGACTTGGTTTTTGA
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Synonyms
The feature 'Ec-27_006240.1' has the following synonyms
Synonym
Esi0000_0053
Esi_0000_0053