Ec-27_006230.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR
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Overview
Homology
BLAST of Ec-27_006230.1 vs. uniprot
Match: D8LAW0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAW0_ECTSI) HSP 1 Score: 528 bits (1359), Expect = 4.670e-180 Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 2
Query: 650 MITPLEISRERLEPAALRKYHPSSARWIMIQRFLDVKGPEYERVLIVDAGQIFFQANPFDIIGDPGVYTFTDDKLIGKSQQHSTKIQDCLGASVLAKLADKPAIHSGVSLGTSNLVVEYARQMSEVLSSAGFQACEKAGVDAGLHDYLLYSGGVQGVLRFDQSSGPMTDVPAGKFDMSGSRVTNLEGREVPIVYRYVENAILTAEVFRRYIYWNQEDSIVNPAGKERAVDDKAAVVPATVENCEQFALSEGVDLFKAKCDLTNAR 1444
MITPLEISRERLEPAALRKYHPSSARWIMIQRFLDVKGPEYERVLIVDAGQIFFQANPFDIIGDPGVYTFTDDKLIGKSQQHSTKIQDCLGASVLAKLADKPAIHSGVSLGTSNLVVEYARQMSEVLSSAGFQACEKAGVDAGLHDYLLYSGGVQGVLRFDQSSGPMTDVPAGKFDMSGSRVTNLEGREVPIVYRYVENAILTAEVFRRYIYWNQEDSIVNPAGKERAVDDKAAVVPATVENCEQFALSEGVDLFKAKCDLTNAR
Sbjct: 1 MITPLEISRERLEPAALRKYHPSSARWIMIQRFLDVKGPEYERVLIVDAGQIFFQANPFDIIGDPGVYTFTDDKLIGKSQQHSTKIQDCLGASVLAKLADKPAIHSGVSLGTSNLVVEYARQMSEVLSSAGFQACEKAGVDAGLHDYLLYSGGVQGVLRFDQSSGPMTDVPAGKFDMSGSRVTNLEGREVPIVYRYVENAILTAEVFRRYIYWNQEDSIVNPAGKERAVDDKAAVVPATVENCEQFALSEGVDLFKAKCDLTNAR 265
BLAST of Ec-27_006230.1 vs. uniprot
Match: A0A7S2RBK6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RBK6_9STRA) HSP 1 Score: 211 bits (536), Expect = 2.170e-57 Identity = 122/371 (32.88%), Postives = 194/371 (52.29%), Query Frame = 2
Query: 500 DLCLGMAVGISPAQLVTFAASFREFAPSADLFMFFEAPTSERFNDIIDTFMITPLEISRERLEPAALRKYHPSSARWIMIQRFLDVKGPEYERVLIVDAGQIFFQANPFDIIGDPGVYTF--TDDKLIGKSQQHSTKIQDCLGASVLAKLADKPAIHSGVSLGTSNLVVEYARQMSEVLSSAGFQACEKAGVDAGLHDYLLYSGGVQGVLRFDQSSGPMTDVPAGKFDMSGSRVTNLEGREVPIVYRYVENAILTAEVFRRYIYWNQEDSIVNPAGKERAVDDKAAVVPATVENCEQFALSEGVDLFKAKCDLTNARAGSLGDCCAACGGRAGCQAFSFDKNFGLCYMKNCDRPNTPGPSATAWSITSGIR 1606
DL +G+ GISP L F S R +PSA L ++ ++P E I++ + +T LE S +EPA LRKYHPS+ RW +I R+L Y RV++ D FQA+PF+ D G + F + + IG+ + +QDC G +VL ++ + I SGVS+G+++ V+ Y +M + + F CE+ GVD G+H+ L+++ + + F QS+G + ++ A + + G +V N + V +V++Y L + F +++W R D E C + + EGVDLFK +CDLT + G+CCA C GC+AFS + C++KNC+ T P + SG +
Sbjct: 32 DLVVGLGTGISPENLAVFCGSLRAVSPSAALVLYLDSPLPELHRRIVERYDVTALEFSVSLIEPAFLRKYHPSNYRWPLIHRYLKDHANAYRRVVLADVRDTMFQADPFERF-DRGFFAFHGVESRTIGQCGWNGGWVQDCFGRTVLQQVQSEAIICSGVSMGSTDEVLAYLGEMQRTMETKEFATCERNGVDQGVHNVLVHTKRIPNLKVFSQSNGWVANLQAQRARIHGGQVFNRQDELVAVVHQYDRRRDLQSAYFDTFVFW------------PRKTDG---------ELCAGYTVEEGVDLFKGRCDLTVTGSQGTGECCAKCTATPGCKAFSIAGS--QCFLKNCNTVTTRSPMP---GVASGFK 375
BLAST of Ec-27_006230.1 vs. uniprot
Match: L1IE52_GUITC (Uncharacterized protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IE52_GUITC) HSP 1 Score: 137 bits (344), Expect = 4.910e-33 Identity = 72/212 (33.96%), Postives = 122/212 (57.55%), Query Frame = 2
Query: 653 ITPLEISRERLEPAALRKYHPSSARWIMIQRFLDVKGPEYERVLIVDAGQIFFQANPFDIIGDPGVYTFTDDKLIGKSQQHSTKIQDCLGASVLAKLADKPAIHSGVSLGTSNLVVEYARQMSEVLSSAGFQACEKAGVDAGLHDYLLYSGGVQGVLRFDQSSGPMTDVPAGKFDMSGSR--VTNLEGREVPIVYRYVENAILTAEVFRRYI 1282
+T L ++R L+PA L KYHPS+ RW+++Q FL G + +VL+ D FQ++PF I+ + G++TF++ I ++ I+ C G + +LA K I SG+SLGT+ V Y M++ ++ F ACE+ GVD G+H+ L++ G + G+ DQ +GP+ + + K MS + V N IV++Y + + + FR+++
Sbjct: 1 VTVLPVNRVSLDPATLGKYHPSTTRWVLMQSFLKRVGHNFNKVLLADVRDTGFQSDPFSIVSEAGLWTFSESVNIMGDDWNTGWIRSCFGQGKVDELASKEIICSGISLGTTMHVQSYLDAMAKEINGPNFAACERNGVDQGIHNVLVHQGSLPGLHVLDQYNGPVAHLQS-KVGMSFNNDVVINSRNERAVIVHQYDRDVFVMRKFFRQFV 211
BLAST of Ec-27_006230.1 vs. uniprot
Match: L1IEM2_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IEM2_GUITC) HSP 1 Score: 143 bits (360), Expect = 2.860e-32 Identity = 101/379 (26.65%), Postives = 175/379 (46.17%), Query Frame = 2
Query: 500 DLCLGMAVGISPAQLVTFAASFREFAPSADLFMFFEAPTSERFNDIIDTFMITPLEISRERLEPAALRKYHPSSARWIMIQRFLDVKGPEYERVLIVDAGQIFFQANPFDIIGDPGVYTFTDDKLIGKSQQHSTKIQDCLGASVLAKLADKPAIHSGVSLGTSNLVVEYARQMSEVLSSAG-FQACEKAGVDAGLHDYLLYS-GGVQGVLRFDQSSGPMTDVP---AGKFDMSGSRVTNLEGREVPIVYRYVENAILTAEVFRRYIYWNQEDSIVNPAGKERAVDDKAAVVPATVENCEQFALSEGVDLFKAKCDLTNA---RAGSLGDCCAACGGRAGCQAFS-FDKNFGLCYMKNCDRPNTPGPSATAWSITSGIRL 1609
DL LG+ + F S R F+PS+D+ +F A T R + ++ + ++ + E + AA+R + + RW++ +RFLD+ G Y RVL+ D Q+ FQ+NPFD++ PG+Y F++ + + + S I+ C +SVL L DK ++ G +G+ + V+ Y + M+ + S C GVD G+H+ + Y+ ++ +Q++G + ++ A ++ V N G +V RY + +F Y+ W+ + G C ++ L V+LFK D ++ R S CC C C F+ FD+ C+MK+ R P TSG ++
Sbjct: 179 DLALGLVDKLHEEYTSIFVLSLRRFSPSSDIVLFLRASTP-RLDALLKNHGVISVKYAEEDISQAAMRNHSSLTYRWLVFERFLDLHGKNYRRVLLADVVQVAFQSNPFDVMKKPGLYAFSESISLSQDEWTSNWIRACFESSVLTPLPDKETLNVGYVMGSIDRVLPYVKVMAATIRSVTRADGCRGEGVDQGVHNVVAYTDASFSDLVVQNQNNGAVGELQSPFAMTYNAGVKAVINGMGVAAAVVLRYYHVPEVMKLLFNSYVVWDVHNVSKGTGG------------------CWRYMLMTHVELFKGHGDFADSSVERVASPLGCCEICDRNQQCNGFTHFDQT---CWMKSISRSPKPEEGFPVPESTSGWKI 535
BLAST of Ec-27_006230.1 vs. uniprot
Match: A0A7S4P7D4_GUITH (Hypothetical protein n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4P7D4_GUITH) HSP 1 Score: 137 bits (345), Expect = 6.560e-31 Identity = 101/377 (26.79%), Postives = 175/377 (46.42%), Query Frame = 2
Query: 491 GAGDLCLGMAVGISPAQLVTFAASFREFAPSADLFMF---FEAPTSERFNDIIDTFMITPLEISRERLEPAALRKYHPSSARWIMIQRFLDVKGPEYERVLIVDAGQIFFQANPFDIIGDPG----VYTFTDDKLIGKSQQHSTKIQDCLGASVLAKLADKPAIHSGVSLGTSNLVVEYARQMSEVLSSAGFQACEKAGVDAGLHDYLLYSGGVQGVLRFDQSSGPMTDVPAGKFDMSGSRVTNLEGREVPIVYRYVENAILTAEVFRRYI--YWNQEDSIVNPAGKERAVDDKAAVVPATVENCEQFALSEGVDLFKAKCDLTN-ARAGSLGDCCAACGGRAGCQAFSFDKN-FGLCYMKNCDRPNT---PGPSAT 1579
G+ D+ +G+A I QL F S R ++ D+ +F E + + F+I + S +E RK+HPS+ RW +I +F + +Y+RVL+ D FQ +PF+I+ D +T D+ IG+ + ++DC G + ++L+ KP I SG+S+GT + V Y + MSE + F ACE+ GVD G+H+ L+++ + + Q G + ++ A +V N+ +V++Y + L + Y+ W++E K V CE + + + +LFK D+ + DCC C A C++F+ G C+ K+ +P++ P P T
Sbjct: 89 GSTDIAIGIAHKIHAVQLAVFVKSLRAYS-KCDIVLFVDELEKEVEKIGREAGVNFII--FKTSESMVERT--RKFHPSTIRWPLIHQFFSLHPDKYKRVLMADVRDTAFQGDPFEILKDSSSSFLAFTGVQDRTIGQCGWNGGWVRDCFGPEMFSRLSSKPIICSGISMGTMDAVKSYLQAMSEHIMKQEFAACERNGVDQGVHNVLVHTDKIPHLRVNRQDDGLVANMQAHVMKFRSGKVYNVNNELARVVHQYDRDLELQRSLLDSYVDFEWHKES-------KGEGV-------------CEGYTIRDNYELFKGLGDIKEEGNYPTFQDCCRQCNKLANCKSFTHKAGGTGTCFFKSASQPSSDPIPAPFLT 440
BLAST of Ec-27_006230.1 vs. uniprot
Match: A0A7S3HHB0_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HHB0_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 2.270e-13 Identity = 67/240 (27.92%), Postives = 110/240 (45.83%), Query Frame = 2
Query: 905 IQDCLGASVLAKLADKPAIHSGVSLGTSNLVVEYARQMSEVLS-----SAGFQACEKAGVDAGLHDYLLYSGGVQGVLRFDQSSGPMTDVPAGK----FDMSGSRVTNLEGREVPIVYRYVENAILTAEVFRRYIYW-NQEDSIVNPAGKERAVDDKAAVVPATVENCEQFALSEGVDLFKAKCDLTNARAGSLGDCCAACGGRAG----------------CQAFSFDKNFGLCYMKNC 1546
I+DC G V + P I SGVS+GT + V +Y +MS VL S+ F ACE+ GVD G+H+ L+++G + V + P+ ++ A S +T+ G + +V++Y + L + +Y+ W N +D +A +K C F +S DLF+ KC+L + R S CC C + C +F++ + G+CY+K+C
Sbjct: 30 IKDCFGEKVFESVKANPIICSGVSMGTIDGVKDYVAKMSSVLLGQDSLSSSFPACERNGVDQGVHNVLVHTGALSNVTVRYEYDFPVVNLQAYPQLQVTPADPSVLTSEAGVKYALVHQYDRLSPLQTALAGQYVDWVNLQDP--------QAEWEKEPT-------CAMFTVSYEKDLFRGKCELGSHRVMSAASCCQVCQSKKKPLSGSVNTGDYPPETVCSSFTYLE--GVCYLKSC 252
BLAST of Ec-27_006230.1 vs. uniprot
Match: A0A7W1CQ63_9BACT (Uncharacterized protein n=1 Tax=Chthoniobacterales bacterium TaxID=2201154 RepID=A0A7W1CQ63_9BACT) HSP 1 Score: 73.9 bits (180), Expect = 1.820e-10 Identity = 53/197 (26.90%), Postives = 91/197 (46.19%), Query Frame = 2
Query: 668 ISRERLEPAALRKYHPSSARWIMIQRFLDVKGPEYERVLIVDAGQIFFQANPFDIIGDPGVYTFTDDKL--IGKSQQHSTKIQDCLGASVLAKLADKPAIHSGVSLGTSNLVVEYARQMSEVLSSAGFQACEKAGVDAGLHDYLLYSGGVQGVLRFDQSSGPMTD---VPAGK--FDMSGSRVTNLEGREVPIVYRY 1237
+ R E A + +H R ++ FL +Y+RVL+ D +FFQA+PF PG++ F +D+ +G H I G L K D+ +G G +++Y QM + + +++ D G+H+YL+Y+G V D P+ VP K FD + + + +G VP++++Y
Sbjct: 96 LPRASKELLAHKVFHLFYRRHLLYLAFLREYAADYDRVLLTDCRDVFFQADPFGWEQSPGLHLFLEDESNKLGTCGHHIRWIMSAFGPETLQKWKDETVSCAGTVFGDVQAILDYLEQMFS--QTMRVKTLKESDGDQGIHNYLIYAGAFPEVTIHDNRRKPVMTLGLVPPDKLQFDQN-DYLLDEDGAIVPVLHQY 289
BLAST of Ec-27_006230.1 vs. uniprot
Match: A0A0A2VBV4_9BACI (Uncharacterized protein n=1 Tax=Pontibacillus chungwhensis BH030062 TaxID=1385513 RepID=A0A0A2VBV4_9BACI) HSP 1 Score: 68.2 bits (165), Expect = 8.520e-9 Identity = 62/222 (27.93%), Postives = 96/222 (43.24%), Query Frame = 2
Query: 500 DLCLGMAVGISPAQLVTFAASFREFAPSADLFMFFEAPTSERFNDIIDTFMITPLEISRERLEPAALRK-YHPSSARWIMIQRFLDVKGPEYERVLIVDAGQIFFQANPFDIIGDPGVYTFTDDKLIGKSQQHSTK-IQDCLGASVLAKLADKPAIHSGVSLGTSNLVVEYARQMSEVLSSAGFQACEKAGVDAGLHDYLLYSGGVQGVLRFDQSSGPMTDV 1159
+L +G+ S + F S + S ++ MFFE E N T + IS E L K + R + FL G Y +VL+ D +FFQ NPFD G T ++L K + +TK I G + +L ++ I +G + G + L++ Y +M L + + D +H+YL++SG VQ V D GP+ V
Sbjct: 8 NLIMGLISHYSWEDIKPFFLSLEKVNYSGEVVMFFEHINEETQN----TLKNLNVNISLIPYERIGLEKTFDIIDYRHYLYLNFLRAHGHRYNKVLLTDVRDVFFQLNPFDAGWSDGSITVAKEELKIKDEYWNTKWILTKFGNHIYQQLENETIICAGTTYGPTELILAYLEEMVYHLFQLHY--FPQIINDQAVHNYLIHSGKVQPVAYSDNEKGPIMTV 223
BLAST of Ec-27_006230.1 vs. uniprot
Match: A0A482STP9_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482STP9_9ARCH) HSP 1 Score: 62.0 bits (149), Expect = 3.830e-7 Identity = 42/157 (26.75%), Postives = 82/157 (52.23%), Query Frame = 2
Query: 806 FFQANPFDIIGDP----GVYTFTDDKLIGKSQQHSTKIQDCLGASVLAKLADKPAIHSGVSLGTSNLVVEYARQMSEVLSSAG--------FQACEKAGVDAGLHDYLLYSGGVQGVLRFDQSSGPMTDVPAGKFDMSGS-RVTNLEGREVPIVYRY 1237
+FQ +PF I V+T + I + +S ++DC +VL ++ + I SGVS+GT+++V++Y M +L F CE+ GVD G+H+ L+++ + + ++D S+G + ++ A ++ +V N +G +V++Y
Sbjct: 5 YFQTDPFIFINPNVPSFSVFTGVESMSIKQCGWNSGWVKDCFAGNVLDQIGGENIICSGVSVGTTDIVLKYIEMMRNILMGLHKAYGLDNKFPTCERNGVDQGVHNVLVHTRKIPKMKKWD-STGFVANMQAKLATVTKDFQVLNSKGERYAVVHQY 160
BLAST of Ec-27_006230.1 vs. uniprot
Match: A0A7S2YCJ7_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YCJ7_9STRA) HSP 1 Score: 60.8 bits (146), Expect = 1.690e-6 Identity = 57/212 (26.89%), Postives = 89/212 (41.98%), Query Frame = 2
Query: 779 VLIVDAGQIFFQANPFDII-------GDPGVYTFTDDKL----IGKSQQHSTK-IQDCLGASVLAKLADKPAIHSGVSLGTSNLVVEYARQMSEVLSSAGFQACEKAGVDAGLHDYLLYSGG------VQGVLRFDQSSGPMTDVPA---------------GKFDMSGSRVTNLEGREVPIVYRYVENAILTAEVFRR-----YIYWNQED 1300
+L+VDA FQANPF+ + G G+ F + + IGKS Q++ + I + G V + DKP I SG ++G + + Y R M G G D G H+ L YS + ++ FDQ +G + ++ A K D G V N +G P+V+++ + L R+ Y W Q +
Sbjct: 28 ILLVDARDTIFQANPFEHLPRNTDPSGKSGLLYFFGESIEATNIGKSAQYNYRWILNAYGYEVATAVQDKPIICSGATMGENIAIETYLRAMVAEADETGTVVM---GSDQGFHNRLYYSNKLASADRIHAIVVFDQGTGIVNNLAALRSQPLEEWGNGRLVEKTDSGGFVVKNWDGSISPVVHQFDRHKELARYFSRKKGKEDYRKWKQNN 236 The following BLAST results are available for this feature:
BLAST of Ec-27_006230.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ec-27_006230.1 ID=Ec-27_006230.1|Name=Ec-27_006230.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=508bpback to top spliced messenger RNA >Ec-27_006230.1 ID=Ec-27_006230.1|Name=Ec-27_006230.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=2503bp|location=Sequence derived from alignment at chr_27:5769860..5777205- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon. CTTGTAGCATATGCTACAACGCACACCTGGATCTGCCAAGTGCAATAGATback to top protein sequence of Ec-27_006230.1 >Ec-27_006230.1 ID=Ec-27_006230.1|Name=Ec-27_006230.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=508bp MAVLKAHRVHKTHNLLGRAGSGLGRRRGSGLDRYNSSDSLKHGEYNRACRback to top mRNA from alignment at chr_27:5769860..5777205- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Ec-27_006230.1 ID=Ec-27_006230.1|Name=Ec-27_006230.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=7346bp|location=Sequence derived from alignment at chr_27:5769860..5777205- (Ectocarpus species7 Ec32 male_plus_femaleSDR)back to top Coding sequence (CDS) from alignment at chr_27:5769860..5777205- >Ec-27_006230.1 ID=Ec-27_006230.1|Name=Ec-27_006230.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1524bp|location=Sequence derived from alignment at chr_27:5769860..5777205- (Ectocarpus species7 Ec32 male_plus_femaleSDR)back to top Synonyms
The feature 'Ec-27_006230.1' has the following synonyms
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