Ec-27_006160.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-27_006160.1
Unique NameEc-27_006160.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length328
Homology
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BLAST of Ec-27_006160.1 vs. uniprot
Match: D8LAW8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAW8_ECTSI)

HSP 1 Score: 546 bits (1408), Expect = 9.080e-195
Identity = 327/327 (100.00%), Postives = 327/327 (100.00%), Query Frame = 1 
Query:    1 MDQVELEIYRVHGLTEKTDNRGSFWIKFDLGYSKDEKIGKGFTQSYRADADSVDVDYKTSSYVKRARSSQMAFQNRRAGLEIFHKKNIVSGGKFDRQVPGPAAAASDHVRADVVHAYPGPKGGGRRAGTWSCRCGCEKELEVGEWPTVSLDEPVAQAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAKFQSVVLTDKEKTDPFGVENLDSNNVLEAEIEAIAPKAATGDLASVMRKGALETKLLMLVSAVQSGELDLPAYCNILKERVVRDKVLAMYLKDEKRTKEAVAVMKRIRAMEEELAGVPQEEEEDVEA 981
            MDQVELEIYRVHGLTEKTDNRGSFWIKFDLGYSKDEKIGKGFTQSYRADADSVDVDYKTSSYVKRARSSQMAFQNRRAGLEIFHKKNIVSGGKFDRQVPGPAAAASDHVRADVVHAYPGPKGGGRRAGTWSCRCGCEKELEVGEWPTVSLDEPVAQAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAKFQSVVLTDKEKTDPFGVENLDSNNVLEAEIEAIAPKAATGDLASVMRKGALETKLLMLVSAVQSGELDLPAYCNILKERVVRDKVLAMYLKDEKRTKEAVAVMKRIRAMEEELAGVPQEEEEDVEA
Sbjct:    1 MDQVELEIYRVHGLTEKTDNRGSFWIKFDLGYSKDEKIGKGFTQSYRADADSVDVDYKTSSYVKRARSSQMAFQNRRAGLEIFHKKNIVSGGKFDRQVPGPAAAASDHVRADVVHAYPGPKGGGRRAGTWSCRCGCEKELEVGEWPTVSLDEPVAQAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAKFQSVVLTDKEKTDPFGVENLDSNNVLEAEIEAIAPKAATGDLASVMRKGALETKLLMLVSAVQSGELDLPAYCNILKERVVRDKVLAMYLKDEKRTKEAVAVMKRIRAMEEELAGVPQEEEEDVEA 327
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BLAST of Ec-27_006160.1 vs. uniprot
Match: A0A6H5JQ36_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ36_9PHAE)

HSP 1 Score: 414 bits (1063), Expect = 1.090e-134
Identity = 284/354 (80.23%), Postives = 290/354 (81.92%), Query Frame = 1 
Query:    1 MDQVELEIYRVHGLTEKTDNRGSFWIKFDLGYSKDEKIGKGFTQSYRADADSVDVDYKTSSYVKRARSSQMAFQNRRAGLEIFHKKNIVSGGKFDRQVPGPAAAASDHVRADVVHAYPGPKGGGRRAG---TWSCRCGC-----------EKELEVGEWPTVSLDEPVAQAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------AAAKFQSVVLTDKEKTDPFGVENLDSNNVLEAEIEAIAPKAATGDLASVMRKGALETKLLMLVSAVQSGELDLPAYCNILKERVVRDKVLAMYLKDEKRTKEAVAVMKRIRAMEEELAGVPQEEEEDVEA 981
            MDQVELEIYRVHGLTEKTDNRGSFWIKFDLGYSKDEKIGKGFTQSYRADADSVDVDYKTS YVKRARSSQMAFQNRRAGLEIFHK+NIVSGG+   +   P          ++  + P    G R AG     S R              EKELEVGEWPTVSLDEPVAQ P  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX             AAAKFQSVVLTDKEK DPFGVENLDSNNVLEAEIEAIAPKAATGDLASVMRKGALETKLLMLVSAVQSGELDLPAYCNILKERVVRDKVLAMYLKDEKRTKEAVAVMKRIRAMEEELAGVPQEEEED EA
Sbjct:  559 MDQVELEIYRVHGLTEKTDNRGSFWIKFDLGYSKDEKIGKGFTQSYRADADSVDVDYKTSCYVKRARSSQMAFQNRRAGLEIFHKRNIVSGGRLIGKCVVPLQPLL--TTCELTVSTPILTEGRREAGGSVELSLRLRKPISADEVVVTEEKELEVGEWPTVSLDEPVAQPPAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAKFQSVVLTDKEKIDPFGVENLDSNNVLEAEIEAIAPKAATGDLASVMRKGALETKLLMLVSAVQSGELDLPAYCNILKERVVRDKVLAMYLKDEKRTKEAVAVMKRIRAMEEELAGVPQEEEEDGEA 910
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BLAST of Ec-27_006160.1 vs. uniprot
Match: A0A835ZDR7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDR7_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 5.250e-19
Identity = 57/116 (49.14%), Postives = 72/116 (62.07%), Query Frame = 1 
Query:  616 VLTDKEKTDPFGVENLDSNNVLEAEIEAIAPKAATGDLASVMRKGALETKLLMLVSAVQSGELDLPAYCNILKERVVRDKVLAMYLKDEKRTKEAVAVMKRIRAMEEELAGVPQEE 963
            +LT  E +DP    ++ SNNVLE EI A A  A    +A+  R G LE KL  L  AV  GEL L  YCN++ ER  RD+VLA++L    R  EA  V +R+R ME+ELAGVP+EE
Sbjct:    1 MLTPLEMSDPLDPAHMASNNVLEDEIAAAAVAAGADPVAAARRMG-LELKLRCLEGAVAGGELTLRDYCNMVAERAARDRVLALWLMRGGRAAEAKRVARRVRLMEDELAGVPEEE 115
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BLAST of Ec-27_006160.1 vs. uniprot
Match: A0A7S2C9N7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C9N7_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 6.580e-7
Identity = 47/116 (40.52%), Postives = 68/116 (58.62%), Query Frame = 1 
Query:  619 LTDKEKTDPFGVENLDSNNVLEAEIEAIAPK--AATGDLASV---MRKGALETKLLMLVSAVQSGELDLPAYCNILKERVVRDKVLAMYLKDEKRTKEAVAVMKRIRAMEEELAGV 951
            LT +EK  P   + + S  VLEAEI A A K  AA G  AS+   ++   L+T++ +L     SG+L   AY   ++ER+ RDK+L  YLK+  R+KE VAV +R++ M  E+  V
Sbjct:  333 LTAEEKKQPLSPQWMVSEAVLEAEI-ATAEKLQAAAGANASIDLIVQSQTLQTQMDLLQIQAGSGQLSPHAYLERVEERIGRDKLLMRYLKENNRSKECVAVFRRVKVMIAEVEAV 447
The following BLAST results are available for this feature:
BLAST of Ec-27_006160.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LAW8_ECTSI9.080e-195100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JQ36_9PHAE1.090e-13480.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZDR7_9STRA5.250e-1949.14Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2C9N7_9STRA6.580e-740.52Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_27contigchr_27:5726330..5731483 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Length984
Hectar predicted targeting categoryother localisation
Gene idEc-27_006160.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-27_006160Ec-27_006160Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_27 5726330..5731483 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_006160.1Ec-27_006160.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_27 5726330..5731483 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_006160.1.7Ec-27_006160.1.7Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5726330..5726458 -
Ec-27_006160.1.6Ec-27_006160.1.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5727217..5727300 -
Ec-27_006160.1.5Ec-27_006160.1.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5727596..5727737 -
Ec-27_006160.1.4Ec-27_006160.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5728657..5728877 -
Ec-27_006160.1.3Ec-27_006160.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5729469..5729607 -
Ec-27_006160.1.2Ec-27_006160.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5730476..5730629 -
Ec-27_006160.1.1Ec-27_006160.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5731369..5731483 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_006160.1CDS:Ec-27_006160.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_27 5726330..5726458 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-27_006160.1 ID=Ec-27_006160.1|Name=Ec-27_006160.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=328bp
MDQVELEIYRVHGLTEKTDNRGSFWIKFDLGYSKDEKIGKGFTQSYRADA
DSVDVDYKTSSYVKRARSSQMAFQNRRAGLEIFHKKNIVSGGKFDRQVPG
PAAAASDHVRADVVHAYPGPKGGGRRAGTWSCRCGCEKELEVGEWPTVSL
DEPVAQAPAPTPIAAPAPAPAPASVPVAQAPAAAGGGAGAAAAAQVQAAA
KFQSVVLTDKEKTDPFGVENLDSNNVLEAEIEAIAPKAATGDLASVMRKG
ALETKLLMLVSAVQSGELDLPAYCNILKERVVRDKVLAMYLKDEKRTKEA
VAVMKRIRAMEEELAGVPQEEEEDVEA*
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spliced messenger RNA

>Ec-27_006160.1 ID=Ec-27_006160.1|Name=Ec-27_006160.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=984bp|location=Sequence derived from alignment at chr_27:5726330..5731483- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGGACCAAGTGGAGCTGGAGATCTATCGTGTTCACGGCCTGACGGAGAA
GACGGATAACCGTGGCTCCTTCTGGATCAAGTTCGATCTGGGGTATTCCA
AGGACGAGAAGATAGGAAAAGGGTTCACGCAGAGCTACCGGGCCGACGCT
GACTCTGTGGACGTGGACTACAAGACGTCCTCCTACGTGAAGAGGGCGAG
GTCGAGCCAGATGGCCTTCCAGAACCGGCGGGCTGGCCTCGAGATCTTCC
ACAAGAAGAACATCGTCAGTGGCGGGAAATTTGATCGGCAAGTGCCTGGC
CCCGCTGCAGCCGCTTCTGACCACGTGCGAGCTGACGTTGTCCACGCCTA
TCCTGGACCAAAGGGAGGAGGGAGGCGGGCGGGAACGTGGAGCTGTCGTT
GCGGCTGCGAAAAAGAGCTTGAGGTTGGCGAGTGGCCTACGGTGTCTCTC
GACGAGCCAGTCGCGCAAGCGCCCGCCCCCACGCCCATTGCTGCCCCAGC
CCCCGCCCCCGCCCCGGCCTCTGTGCCCGTGGCCCAAGCCCCTGCTGCTG
CCGGCGGGGGAGCGGGAGCGGCGGCGGCGGCGCAAGTGCAAGCGGCGGCG
AAATTCCAGAGCGTGGTCCTGACGGACAAAGAAAAGACTGATCCTTTCGG
GGTGGAGAACCTGGACAGCAACAACGTGCTCGAAGCTGAGATCGAAGCTA
TCGCTCCGAAGGCGGCCACGGGCGACCTGGCGTCCGTCATGCGCAAGGGG
GCGCTCGAGACCAAGCTGCTGATGCTGGTGTCCGCGGTGCAGTCTGGCGA
GCTGGACCTTCCGGCCTACTGCAACATCTTGAAGGAGAGGGTCGTCAGAG
ACAAGGTTTTGGCGATGTACCTGAAGGATGAAAAGCGCACCAAGGAGGCG
GTGGCAGTCATGAAGCGCATACGGGCCATGGAGGAAGAACTCGCTGGTGT
GCCTCAAGAGGAAGAGGAGGATGTAGAAGCGTAA
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protein sequence of Ec-27_006160.1

>Ec-27_006160.1 ID=Ec-27_006160.1|Name=Ec-27_006160.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=328bp
MDQVELEIYRVHGLTEKTDNRGSFWIKFDLGYSKDEKIGKGFTQSYRADA
DSVDVDYKTSSYVKRARSSQMAFQNRRAGLEIFHKKNIVSGGKFDRQVPG
PAAAASDHVRADVVHAYPGPKGGGRRAGTWSCRCGCEKELEVGEWPTVSL
DEPVAQAPAPTPIAAPAPAPAPASVPVAQAPAAAGGGAGAAAAAQVQAAA
KFQSVVLTDKEKTDPFGVENLDSNNVLEAEIEAIAPKAATGDLASVMRKG
ALETKLLMLVSAVQSGELDLPAYCNILKERVVRDKVLAMYLKDEKRTKEA
VAVMKRIRAMEEELAGVPQEEEEDVEA*
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mRNA from alignment at chr_27:5726330..5731483-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-27_006160.1 ID=Ec-27_006160.1|Name=Ec-27_006160.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=5154bp|location=Sequence derived from alignment at chr_27:5726330..5731483- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGACCAAGTGGAGCTGGAGATCTATCGTGTTCACGGCCTGACGGAGAA
GACGGATAACCGTGGCTCCTTCTGGATCAAGTTCGATCTGGGGTATTCCA
AGGACGAGAAGATAGGTATGACGATGACGATGGTGACGCTGGCTGCACGA
TAGCCTTCTCTTTTTTTACGGCTTTTTTTTTCCGGGAGTGTTTTTTTATA
TGCCCCCCCCGCCCGCGTGCATTGCGAGGTCAATGGTCAACGACTACGGC
TTGCACGACTATGAGTACACCCACCCCCCGCGTGCATTTGCCCTGTCTGC
TTTTATCGGCGCATGCTTTTCCAGTGATGAAGAGCCACGAGAGATCGTGG
CTGCCTGTTTCTACGGCTGTGCGTTGCTTGTCTGCCATCAAACGTAGAGT
TTTAGTGTGTCCTCCTGGCCACTGAAAACGGCGTATTTTTCTTGTGATTG
TTATGTATCTGGTTTCGACTCATCTGTTCTGGGTGCCAGTCGGTACCTCT
CGGCGTTAACGCGCAATACCTTCTCTGTTTGCTGTTCCTCCACACCCCAG
AATCACTTCCCCGAAAGCCGCTGTACCGGCACTACTGCTGTTTCTGGGGA
AAGAGTTTGCGCAATTGTACCGCGCTGACCCCATCGTATTTGTCTTTTGT
TCGTGTTGTCCCTCTATCCATGTATACCAACATGTATTATCAACCTCTCA
TCCCCTGCTCTAATGCTTCTCGTGTACATATTTTGTGCTGAACTTCTTGT
TGTACCGAGCATATTTTTCTGTTTTTACCAGTGTTCCTTTGTATTGTACC
CCTGTAATGTGCCTCTGCAATGTACCTCTGTACGGTACCTCTTCCTGACC
GCAGGAAAAGGGTTCACGCAGAGCTACCGGGCCGACGCTGACTCTGTGGA
CGTGGACTACAAGACGTCCTCCTACGTGAAGAGGGCGAGGTCGAGCCAGA
TGGCCTTCCAGAACCGGCGGGCTGGCCTCGAGATCTTCCACAAGAAGAAC
ATCGTCAGGTAAGATGGAGATCTTTACGATCGATATCTTTCACAAGAACA
TGTTCAGCTAAGATAGAGATCTTTTAGATCGACACTTCGAAGTATATATC
TTTTAGATCGATATCTTTCACAACAAGCACATGTTCAGGTAAGATCGAGA
TCTTTTAGATCGATATATATCTTTTAGATGGAGATCTTTCACAACAAGCA
CATGTTCGGGTAAGATCGAGATACTACAGCATACTCCACGAAAAGAACAT
CGTTAGGTGAAGAAGGCGCGTTAAGCCCCAAGGCTGGCCAGAGCGGGGGC
GGTTTCACGAAACGGGAATGGAGTTTCGCCGTGCTACTTTTTTTGTCCGG
ATGCAGCCCCGCCGGAGCTCTCGCTTGTGTCGATTGTAAGCGTCTGGGAT
GTGGATTCTGCAGCGTTGCTTGTTTTTGGTGGTACGGTATATGCACGCGT
CTCATGATAGACCATCGTCGTGTAGTTGGGTTGCGGTGAGGTGAGGTGTG
GAAGTGCGTTGGGGGAGTGCGTGAGCAAGATTATCGCCGCCGATGCTAAC
GACAAGAACGCTCTCGATGGAACACGTGACACCTCAAAACACCCAACTGG
AGTCGCTCATCGAAGACAGTTCGACGCCCCCCCTCCCGCTGGGAAAAAAG
AAACACACCCAAAACTGTTTTTACAGTAAAATCATGAGTGCTGCTGTAAT
GAAAAAGTTAAAGAGATAATGGGAGACGAAGCTGATGAATTTGTAAAGTC
GTACAAAAAATACATGAACACAACAGAAATTTCAACAGACTTATAACAAC
ATGTTAACGTCTCCCCCCCCCCCCCCCCCCGCCCTTCGCATGCATTCGAC
TGGGCGCTTTTGGATGTGCGAAAAAGTGGCGGGAAATTTGATCGGCAAGT
GCCTGGCCCCGCTGCAGCCGCTTCTGACCACGTGCGAGCTGACGTTGTCC
ACGCCTATCCTGGACCAAAGGGAGGAGGGAGGCGGGCGGGAACGTGGAGC
TGTCGTTGCGGCTGCGCAAGCCCATCTCAGCGGACGAAGTCGTCGTCACC
GAGGGATTCTAGTTTTTTTTTTTTTTCCCTTGTGAGACATGCTCGCGAGG
AGAGTAACGTTAGAAGGACTTTTTATCGTAGTTCGCCACCACTCTCGGTT
TATCCTCCATAACCTGCTTGTACTCCCCACCCCCCTGGTCCGGTGAAAAT
CCGGCGTGCTCCGTCCCGGCTTTGTAGGGATGCGAGGTCAATGGTCTAAC
GACAATGGCATGCACGACTGTGAGTACCTCCCCCCCCCCCCACCCTCCNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCCGCC
AAGATTTAACGTTTTCCCCATTACGGTCAACCTACCTGTCCCTCTTTCGC
GTGCAGGAAAAAGAGCTTGAGGTTGGCGAGTGGCCTACGGTGTCTCTCGA
CGAGCCAGTCGCGCAAGCGCCCGCCCCCACGCCCATTGCTGCCCCAGCCC
CCGCCCCCGCCCCGGCCTCTGTGCCCGTGGCCCAAGCCCCTGCTGCTGCC
GGCGGGGGAGCGGGAGCGGCGGCGGCGGCGCAAGTGCAAGCGGCGGCGAA
ATTCCAGAGCGTGGTCCTGACGGACAAGTGAGCTATTTTGCTTGCTTCGG
TAGTGTTGGCGCTGGTGCTGGTGCAGTAGGTGCAGTAGGGGCCCCTGTTA
ACTGCCGGTGTATGTGCCCAGAAACGTCACCGGCGGCGCTATGCAAACAT
TGAGAAATGACTTGGAAATTCAGTGTGTGCCCGCCGAAAACTCCGGCACC
ATTCAACCGGCACTAAACAGGGACCTCTCTACTGGAGTTTAAGGCACCGT
CTGGTGTAGGTGTTTGTTTATATTGTTAATAGTATGGGTGAAACAGTGTA
GGTGTTTTGTTTATATTGTTAATAGTATGGGTGAAACAGTGTGTGGTGCT
GTTGCGAGGTTCGCTCGAGCTCTGGGAGCGCATGCTAGCCGTACAGCAGT
AGCAGACAGGTCGCTGGTTTCTTTGACAGTGCTGAATATCTTAGTTGTCT
TCTATCTTCTATCTTCCGTTTTCTGAGGCGAGGTGCATGTGCATACATGT
ATGGTGCGAATGGATCGCTTCGAAGGCTACTTGTACACTTTGGGCGATTG
ACAGAGAGGAGTTTTGGCGACCCCGAACCAAACCAATACTAGTAAATGAC
TAGATTCGATTGAGGTAAAACAGATTTTTCCCATGGAAAATATTGTTGCG
GAAAATGGCGAAGAGGACCAGCATGTTGGATAGACGTGTCTCTGTTTGGA
GCTGGAACTACACTGTCGGTGCTCTGTCTAGCAAGAGATGCGTGGTGAAT
GGCCACACGGTAACGGAAGGAGGGCAACAACGACTGGATATGCCCCCCCC
CAATAACTTCCGGCTTTGTAGGGATGCGAAGTCAATGGTCTAACACCTAC
AGCATGCACGGCTATGAGTACCCCCCCCGAAAAACCCATGTTCTTCGGAA
AGAAGTCTGACCCCCCCCCCGCCTACGAAACATCCGTTTTCTGCAGAGAA
AAGACTGATCCTTTCGGGGTGGAGAACCTGGACAGCAACAACGTGCTCGA
AGCTGAGATCGAAGCTATCGCTCCGAAGGCGGCCACGGGCGACCTGGCGT
CCGTCATGCGCAAGGGGGCGCTCGAGACCAAGCTGCTGGTGAGGGGAGGG
GGTGGCATGCCGTGGTCGTTAGACCATTGACCTCGGGCAAAGTTGCTGGT
GGGAGCGGGGGGGGGCGGTGAACGATATACAACGCAACGCACAACAATAT
GCAACACTCTCTCGCTGTTTTACACCGCGGGTGTCCCGCAATTTGTCTTT
CTTTCGTGGTTGTTGCTGTGTTTGACCCCCGGCTGGTCGGCCCAAGCAAG
GAAAGTTTACGCCGCATGTGTGCGATTGATAAGTTTACATTGCTTTTTAC
TACGACTGTCCTCTGTGCGTGCGATCTCCGTAGATGCTGGTGTCCGCGGT
GCAGTCTGGCGAGCTGGACCTTCCGGCCTACTGCAACATCTTGAAGGAGA
GGGTCGTCAGAGACAAGGTAAGAGAAACATCACTACTCTCGCGGCACAAC
CATGCGGAACGTCCGTGAAAATCAAGTGTGTGTCGTGACGCCGTTAGATA
TACGGCAAGAGAGGAACTTGGAAAGTGACTCCCGTAGTCATCGTCCACAG
CCACCGGATCCATGCCCTGTTTTTGAAGCGAACCAAGCTGGTTTTGAAAC
GAACCAAGCGAACCACCTACATCCCAGCCCCCATGCGCCACATTCTCCCT
ACTTGAATTCATTCGCCGCAAGAGCTGCTGCTGTTCAAACCGCCTCGGAG
TAGATATTAGGAGTATCGCAGTATCTCTCCTCTCGTACGGAACCAATGAG
TCTCTCGCTCCATCAACCACACTTCCCTGTCCCCGCCCCGGCGTTACATG
GGATGCATGAGGCAGGCAGGGGTCTCAATATCACGGGGGTGTACTTGGTA
AACATCAACCCGCCCCCGACCTCCCTCCCCTTTGACGCTAAGGCATGCAA
AACAGGAGTACGGCCCCCCTGCCTCGCTCCAATTATGTTTCGGGTCGTTT
TTTTCGTGCTAGTCGGTGTTTTTCACGTGCAATATCGCATTGTATAAAAA
CTACCGCCGTTTTGTTTTGAGCTGATCGTCCTTCATGCATCACCCCCCCC
CCCCCGCTCTTGACGCATAAGTGGCTTGCATGGTAGCATGGCCAATACTC
GAATACGGCAAATAGCCCGCCACACGTGTACGGACCGACGCCCAGCCCAC
ACCCAACTCACGTTATTCCCGTCAGGTTTTGGCGATGTACCTGAAGGATG
AAAAGCGCACCAAGGAGGCGGTGGCAGTCATGAAGCGCATACGGGCCATG
GAGGAAGAACTCGCTGGTGTGCCTCAAGAGGAAGAGGAGGATGTAGAAGC
GTAA
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Coding sequence (CDS) from alignment at chr_27:5726330..5731483-

>Ec-27_006160.1 ID=Ec-27_006160.1|Name=Ec-27_006160.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=984bp|location=Sequence derived from alignment at chr_27:5726330..5731483- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGACCAAGTGGAGCTGGAGATCTATCGTGTTCACGGCCTGACGGAGAA
GACGGATAACCGTGGCTCCTTCTGGATCAAGTTCGATCTGGGGTATTCCA
AGGACGAGAAGATAGGAAAAGGGTTCACGCAGAGCTACCGGGCCGACGCT
GACTCTGTGGACGTGGACTACAAGACGTCCTCCTACGTGAAGAGGGCGAG
GTCGAGCCAGATGGCCTTCCAGAACCGGCGGGCTGGCCTCGAGATCTTCC
ACAAGAAGAACATCGTCAGTGGCGGGAAATTTGATCGGCAAGTGCCTGGC
CCCGCTGCAGCCGCTTCTGACCACGTGCGAGCTGACGTTGTCCACGCCTA
TCCTGGACCAAAGGGAGGAGGGAGGCGGGCGGGAACGTGGAGCTGTCGTT
GCGGCTGCGAAAAAGAGCTTGAGGTTGGCGAGTGGCCTACGGTGTCTCTC
GACGAGCCAGTCGCGCAAGCGCCCGCCCCCACGCCCATTGCTGCCCCAGC
CCCCGCCCCCGCCCCGGCCTCTGTGCCCGTGGCCCAAGCCCCTGCTGCTG
CCGGCGGGGGAGCGGGAGCGGCGGCGGCGGCGCAAGTGCAAGCGGCGGCG
AAATTCCAGAGCGTGGTCCTGACGGACAAAGAAAAGACTGATCCTTTCGG
GGTGGAGAACCTGGACAGCAACAACGTGCTCGAAGCTGAGATCGAAGCTA
TCGCTCCGAAGGCGGCCACGGGCGACCTGGCGTCCGTCATGCGCAAGGGG
GCGCTCGAGACCAAGCTGCTGATGCTGGTGTCCGCGGTGCAGTCTGGCGA
GCTGGACCTTCCGGCCTACTGCAACATCTTGAAGGAGAGGGTCGTCAGAG
ACAAGGTTTTGGCGATGTACCTGAAGGATGAAAAGCGCACCAAGGAGGCG
GTGGCAGTCATGAAGCGCATACGGGCCATGGAGGAAGAACTCGCTGGTGT
GCCTCAAGAGGAAGAGGAGGATGTAGAAGCGTAA
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Synonyms
The feature 'Ec-27_006160.1' has the following synonyms
Synonym
Esi0000_0066
Esi_0000_0066