Ec-27_006150.2 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-27_006150.2
Unique NameEc-27_006150.2
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length174
Homology
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BLAST of Ec-27_006150.2 vs. uniprot
Match: D8LAW9_ECTSI (START domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAW9_ECTSI)

HSP 1 Score: 452 bits (1164), Expect = 2.350e-142
Identity = 276/277 (99.64%), Postives = 276/277 (99.64%), Query Frame = 1 
Query:  190 ENTQHAVGKEKVARQHALHTSSPQPRXXXXXXXXXXXXXXXXXXXXXXXXRGTGRGDPQQPGIMGGEATERRSPFAKLAGVGDGLRARARRLLVAEVEGRQKHDAGVPRRRQGFGRRGRESLAFGNFGARKQWVKEEEGEVISAEMLALQAENDASVEAVLAVIESDGWERVTEKSGVVVVRKFVXXXXXXXXXXXXXXRGIVDEGAAAKFACVKAMGTLDARASDLYKLFLDNERVHEYNDNCKEVRDLERLSDDTKVSWACTPRYRPFKARDFVT 1020
            ENTQHAVGKEKVARQHALHTSSPQPR XXXXXXXXXXXXXXXXXXXXXXXRGTGRGDPQQPGIMGGEATERRSPFAKLAGVGDGLRARARRLLVAEVEGRQKHDAGVPRRRQGFGRRGRESLAFGNFGARKQWVKEEEGEVISAEMLALQAENDASVEAVLAVIESDGWERVTEKSGVVVVRKFVXXXXXXXXXXXXXXRGIVDEGAAAKFACVKAMGTLDARASDLYKLFLDNERVHEYNDNCKEVRDLERLSDDTKVSWACTPRYRPFKARDFVT
Sbjct:   99 ENTQHAVGKEKVARQHALHTSSPQPRQXXXXXXXXXXXXXXXXXXXXXXXRGTGRGDPQQPGIMGGEATERRSPFAKLAGVGDGLRARARRLLVAEVEGRQKHDAGVPRRRQGFGRRGRESLAFGNFGARKQWVKEEEGEVISAEMLALQAENDASVEAVLAVIESDGWERVTEKSGVVVVRKFVXXXXXXXXXXXXXXRGIVDEGAAAKFACVKAMGTLDARASDLYKLFLDNERVHEYNDNCKEVRDLERLSDDTKVSWACTPRYRPFKARDFVT 375
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BLAST of Ec-27_006150.2 vs. uniprot
Match: A0A6H5JSI0_9PHAE (START domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI0_9PHAE)

HSP 1 Score: 287 bits (735), Expect = 1.580e-82
Identity = 167/224 (74.55%), Postives = 173/224 (77.23%), Query Frame = 1 
Query:  349 GRGDPQQPGIMGGEATERRSPFAKLAGVGDGLRARARRLLVAEVEGRQKHDAGVPRRRQGFGRRGRESLAFGNFGARKQWVKEEEGEVISAEMLALQAENDASVEAVLAVIESDGWERVTEKSGVVVVRKFVXXXXXXXXXXXXXXRGIVDEGAAAKFACVKAMGTLDARASDLYKLFLDNERVHEYNDNCKEVRDLERLSDDTKVSWACTPRYRPFKARDFVT 1020
            GRG+ QQPGIMGG++TER SPFAKLAGVGDGLRARARRLLVAE+EGRQKHDAG PRRRQGFGRR RESLAFGNFGARKQWVKEEE EVISAEMLA      A      +    DG       +                 XXXXXX     E AAAKFACVKAMGTLDARASDLYKLFLDNERVHEYNDNCKEVRDLERLSDDTKVSWACTPRYRPFKARDFVT
Sbjct:   89 GRGNAQQPGIMGGKSTERSSPFAKLAGVGDGLRARARRLLVAEMEGRQKHDAGAPRRRQGFGRRSRESLAFGNFGARKQWVKEEEEEVISAEMLARTMR--AWTRCWPSSSPMDGNMLPKSPASSSSGNSSHPLPRHAPSXXXXXXXXXXXEEAAAKFACVKAMGTLDARASDLYKLFLDNERVHEYNDNCKEVRDLERLSDDTKVSWACTPRYRPFKARDFVT 310
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BLAST of Ec-27_006150.2 vs. uniprot
Match: A0A7S2REM1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2REM1_9STRA)

HSP 1 Score: 108 bits (271), Expect = 2.890e-22
Identity = 54/126 (42.86%), Postives = 81/126 (64.29%), Query Frame = 1 
Query:  646 NDASVEAVLAVIESDGWERVTEKSGVVVVRKFVXXXXXXXXXXXXXXRGIVDEGAAAKFACVKAMGTLDARASDLYKLFLDNERVHEYNDNCKEVRDLERLSDDTKVSWACTPRYRPFKARDFVTL 1023
            N A+V+++LAV+   GW +V+  +    +R ++                  D+ AAAKF+CVKA   L+A   D+YKLFLDN +VHEYN++C+++ D+ER+S DTKV+W+ T  + PFK RDFVT+
Sbjct:   82 NQANVDSMLAVVRGAGWRQVSSTNDHNRIRVYLKSVTPGTHLETEA----ADDVAAAKFSCVKATAILNASPHDVYKLFLDNSQVHEYNEHCQKLEDVERVSKDTKVAWSVTAPFGPFKPRDFVTM 203
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BLAST of Ec-27_006150.2 vs. uniprot
Match: A0A7S3UPT8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UPT8_HETAK)

HSP 1 Score: 111 bits (277), Expect = 3.620e-22
Identity = 63/147 (42.86%), Postives = 86/147 (58.50%), Query Frame = 1 
Query:  622 EMLALQAENDASVEAVLA-VIESDGWERVTEKSGVVVVRKFVXXXXXXXXXXXXXXR------------GIVDEGAAAKFACVKAMGTLDARASDLYKLFLDNERVHEYNDNCKEVRDLERLSDDTKVSWACTPRYRPFKARDFVTL 1023
            E   L A+N   V+ +L+ V + +GW  V E+ G+ V +KF+                             ++E  AAKFA VKA GT++A AS +Y+LFLDN RVHEYN  C +V+DL  LS+DTKV+WAC+PR+ P KARDF T+
Sbjct:  145 EKAMLDAQNQRDVDRLLSEVTDDEGWGLVVERQGIKVWKKFLSPGRHSSLRDGESSSITAYDEQEQAALAAMEE-RAAKFAAVKAAGTINAPASSIYRLFLDNSRVHEYNSLCHKVKDLAYLSEDTKVTWACSPRFGPVKARDFCTV 290
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BLAST of Ec-27_006150.2 vs. uniprot
Match: A0A835YQ35_9STRA (START domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ35_9STRA)

HSP 1 Score: 103 bits (258), Expect = 7.030e-22
Identity = 48/69 (69.57%), Postives = 58/69 (84.06%), Query Frame = 2 
Query: 1100 KKYVRAEILIATNIMRPNREDPSKTDFISVTHINPGGIADSRIGAKIVNKLCAKAPVNLLVALERSANS 1306
            K YVRAEILIATN+MR N  DP KTDF++V H+NPGG+ADS +GA +VN LCA+AP+ LL ALER+ANS
Sbjct:   91 KDYVRAEILIATNMMRANAHDPRKTDFVTVAHVNPGGVADSTLGANVVNMLCAQAPLKLLQALERAANS 159
[Close]
BLAST of Ec-27_006150.2 vs. uniprot
Match: A0A7S2RES9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RES9_9STRA)

HSP 1 Score: 108 bits (271), Expect = 7.330e-22
Identity = 54/126 (42.86%), Postives = 81/126 (64.29%), Query Frame = 1 
Query:  646 NDASVEAVLAVIESDGWERVTEKSGVVVVRKFVXXXXXXXXXXXXXXRGIVDEGAAAKFACVKAMGTLDARASDLYKLFLDNERVHEYNDNCKEVRDLERLSDDTKVSWACTPRYRPFKARDFVTL 1023
            N A+V+++LAV+   GW +V+  +    +R ++                  D+ AAAKF+CVKA   L+A   D+YKLFLDN +VHEYN++C+++ D+ER+S DTKV+W+ T  + PFK RDFVT+
Sbjct:   82 NQANVDSMLAVVRGAGWRQVSSTNDHNRIRVYLKSVTPGTHLETEA----ADDVAAAKFSCVKATAILNASPHDVYKLFLDNSQVHEYNEHCQKLEDVERVSKDTKVAWSVTAPFGPFKPRDFVTM 203
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BLAST of Ec-27_006150.2 vs. uniprot
Match: L1J651_GUITC (START domain-containing protein n=2 Tax=Geminigeraceae TaxID=589343 RepID=L1J651_GUITC)

HSP 1 Score: 102 bits (253), Expect = 5.880e-19
Identity = 58/138 (42.03%), Postives = 77/138 (55.80%), Query Frame = 1 
Query:  619 AEMLALQAENDASVEAVLA----VIESDGWERVTEKSGVVVVRKFVXXXXXXXXXXXXXXRGIVDEGAAAKFACVKAMGTLDARASDLYKLFLDNERVHEYNDNCKEVRDLERLSDDTKVSWACTPRYRPFKARDFVT 1020
            AE+ A  AE + + + +L     V+  DGWE V  + GV V RK +                        KF CVKA+G +DA+A+D+Y+L  D+ RV EYN+ C +VRDL  LS DTKV+WA +  Y PFK RDFVT
Sbjct:  195 AELAASAAEVEGTNKMLLGRLFTVLAGDGWEHVLHQDGVDVYRKRIVDLYQ----------------GGEKFYCVKAVGVIDAKAADIYELLKDSARVDEYNEECAQVRDLSALSSDTKVTWAASKTYFPFKPRDFVT 316
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BLAST of Ec-27_006150.2 vs. uniprot
Match: A0A7S4K5H3_GUITH (Hypothetical protein (Fragment) n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4K5H3_GUITH)

HSP 1 Score: 95.9 bits (237), Expect = 8.010e-19
Identity = 50/133 (37.59%), Postives = 72/133 (54.14%), Query Frame = 1 
Query:  622 EMLALQAENDASVEAVLAVIESDGWERVTEKSGVVVVRKFVXXXXXXXXXXXXXXRGIVDEGAAAKFACVKAMGTLDARASDLYKLFLDNERVHEYNDNCKEVRDLERLSDDTKVSWACTPRYRPFKARDFVT 1020
            E+  + A ND  VE +L +     W ++++  G+ V R  +                    G +AKF CV + G LDA    +Y  F+DN RVHEYN+ CK+V+DLE L  +TK++W+ + R  PFK RDFVT
Sbjct:    2 EVTGIDAVNDDLVEKILTICGEASWTQISDSDGIKVWRTMLPESLQIAGRPL---------GPSAKFFCVMSSGILDAPPEQVYTYFVDNSRVHEYNEFCKQVKDLEYLDANTKITWSASGRVGPFKERDFVT 125
[Close]
BLAST of Ec-27_006150.2 vs. uniprot
Match: A0A7S1HKH9_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis TaxID=77924 RepID=A0A7S1HKH9_HEMAN)

HSP 1 Score: 95.1 bits (235), Expect = 6.710e-18
Identity = 52/130 (40.00%), Postives = 70/130 (53.85%), Query Frame = 1 
Query:  631 ALQAENDASVEAVLAVIESDGWERVTEKSGVVVVRKFVXXXXXXXXXXXXXXRGIVDEGAAAKFACVKAMGTLDARASDLYKLFLDNERVHEYNDNCKEVRDLERLSDDTKVSWACTPRYRPFKARDFVT 1020
            A+Q  N+  +  +  V+  D WE V    GV V RK                  I D     KF C+KA+ T++AR  D+Y L  D +RV EYND C    +L  LSDDT+++WAC+ +Y PFKARDF+T
Sbjct:   21 AVQTHNNELIGRLFNVMGGDDWEHVLCLGGVNVYRK-----------------RITDVPGGEKFYCIKAVRTINARPIDVYDLLKDPQRVSEYNDECALTEELPPLSDDTRLTWACSKKYGPFKARDFIT 133
[Close]
BLAST of Ec-27_006150.2 vs. uniprot
Match: A0A7S4NFJ2_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4NFJ2_GUITH)

HSP 1 Score: 95.9 bits (237), Expect = 7.470e-18
Identity = 50/133 (37.59%), Postives = 72/133 (54.14%), Query Frame = 1 
Query:  622 EMLALQAENDASVEAVLAVIESDGWERVTEKSGVVVVRKFVXXXXXXXXXXXXXXRGIVDEGAAAKFACVKAMGTLDARASDLYKLFLDNERVHEYNDNCKEVRDLERLSDDTKVSWACTPRYRPFKARDFVT 1020
            E+  + A ND  VE +L +     W ++++  G+ V R  +                    G +AKF CV + G LDA    +Y  F+DN RVHEYN+ CK+V+DLE L  +TK++W+ + R  PFK RDFVT
Sbjct:    2 EVTGIDAVNDDLVEKILTICGEASWTQISDSDGIKVWRTMLPESLQIAGRPL---------GPSAKFFCVMSSGILDAPPEQVYTYFVDNSRVHEYNEFCKQVKDLEYLDANTKITWSASGRVGPFKERDFVT 125
The following BLAST results are available for this feature:
BLAST of Ec-27_006150.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LAW9_ECTSI2.350e-14299.64START domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JSI0_9PHAE1.580e-8274.55START domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A7S2REM1_9STRA2.890e-2242.86Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3UPT8_HETAK3.620e-2242.86Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A835YQ35_9STRA7.030e-2269.57START domain-containing protein n=1 Tax=Tribonema ... [more]
A0A7S2RES9_9STRA7.330e-2242.86Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
L1J651_GUITC5.880e-1942.03START domain-containing protein n=2 Tax=Geminigera... [more]
A0A7S4K5H3_GUITH8.010e-1937.59Hypothetical protein (Fragment) n=1 Tax=Guillardia... [more]
A0A7S1HKH9_HEMAN6.710e-1840.00Hypothetical protein n=2 Tax=Hemiselmis TaxID=7792... [more]
A0A7S4NFJ2_GUITH7.470e-1837.59Hypothetical protein n=1 Tax=Guillardia theta TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_27contigchr_27:5719263..5726458 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Length4146
Hectar predicted targeting categoryother localisation
Gene idEc-27_006150.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-27_006150Ec-27_006150Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_27 5719263..5726458 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_006150.2Ec-27_006150.2Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_27 5720822..5722912 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_006150.2.1Ec-27_006150.2.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5719263..5719419 +
Ec-27_006150.2.2Ec-27_006150.2.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5720481..5720958 +
Ec-27_006150.2.3Ec-27_006150.2.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5721460..5721585 +
Ec-27_006150.2.4Ec-27_006150.2.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5722356..5722499 +
Ec-27_006150.2.5Ec-27_006150.2.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5722798..5722988 +
Ec-27_006150.2.6Ec-27_006150.2.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5723409..5726458 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_0061505UTR:Ec-27_006150.2Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_27 5719263..5719419 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_006150.2CDS:Ec-27_006150.2Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_27 5720822..5720958 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_0061503UTR:Ec-27_006150.2Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_27 5722913..5722988 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-27_006150.2 ID=Ec-27_006150.2|Name=Ec-27_006150.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=174bp
MTQGCRGGGKGSAGGAGNPWLSGISARESSGSRRKKGRLSARKCWRSRQR
TMRAWRRCWPSSSPTGGNVSPKSPASSSSGSSSHPLPRRHHPPPLPAEGS
STKEQPPSLLVSRPWGRSTLEPAICTSSSSTTSACTSTTITARKCETSRG
CRTTPRCRGPARPGTGRLRPGTS*
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spliced messenger RNA

>Ec-27_006150.2 ID=Ec-27_006150.2|Name=Ec-27_006150.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=4146bp|location=Sequence derived from alignment at chr_27:5719263..5726458+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
CTCACACATTGCTCGCCGCCATGGCCCCGCTACAGCAACACGTGGCGCTT
CTGCCTGTGCTTGCGGCGGCTCTTTTGGCCTCTGTCACGGCCGGGAGAAG
CGGTGGTGGCCCCGTAGCTCCAGCTCTCCTACATGTACAACCCACAAGTC
AAGTCAGCACCAGCACCAGCAGCGGCGGCGGCCTCCTGGAGGAGAACACT
CAGCACGCCGTCGGGAAGGAGAAGGTTGCCCGACAGCATGCGCTGCACAC
CTCTTCACCACAACCGCGGCAGCAAGAAGAAGAGGGGGAGGAGGAGGAGC
CGCTGAGGCGATCACAACAACAACGGTTTCAACGAAGGAGGCGGGGGACG
GGGAGGGGGGATCCGCAGCAGCCAGGGATAATGGGCGGAGAGGCCACGGA
GAGAAGAAGCCCTTTCGCCAAGCTGGCGGGGGTTGGCGACGGGCTCAGAG
CTCGCGCGCGGCGGCTGCTGGTAGCCGAGGTGGAAGGGAGGCAGAAACAT
GACGCAGGGGTGCCGAGGAGGAGGCAAGGGTTCGGCCGGAGGGGCAGGGA
ATCCTTGGCTTTCGGGAATTTCGGCGCGCGAAAGCAGTGGGTCAAGGAGG
AAGAAGGGGAGGTTATCAGCGCGGAAATGTTGGCGCTCCAGGCAGAGAAC
GATGCGAGCGTGGAGGCGGTGTTGGCCGTCATCGAGTCCGACGGGTGGGA
ACGTGTCACCGAAAAGTCCGGCGTCGTCGTCGTCCGGAAGTTCGTCCCAC
CCCCTCCCAAGGCGCCATCATCCTCCTCCTCTTCCAGCAGAGGGATCGTC
GACGAAGGAGCAGCCGCCAAGTTTGCTTGTGTCAAGGCCATGGGGACGCT
CGACGCTCGAGCCAGCGATCTGTACAAGCTCTTCCTCGACAACGAGCGCG
TGCACGAGTACAACGATAACTGCAAGGAAGTGCGAGACCTCGAGAGGCTG
TCGGACGACACCAAGGTGTCGTGGGCCTGCACGCCCAGGTACCGGCCGTT
TAAGGCCAGGGACTTCGTGACCGCTGTCCACTACCGCACCCTGGAAGACG
GAACGATGATGGTGCTCAACAGGCCCGTCGAGCACCCGGCGGCAAGGCGC
GGGAAGAAGTACGTTCGAGCCGAGATCCTCATAGCGACCAACATCATGCG
GCCCAACCGCGAGGACCCCAGCAAGACCGACTTCATCTCGGTGACCCACA
TCAACCCCGGCGGCATAGCGGACTCGAGGATCGGGGCCAAGATAGTCAAC
AAGCTATGCGCCAAGGCGCCGGTGAACCTGCTCGTCGCCCTGGAACGTTC
CGCGAACTCGGCGCCCGTTCCGAAGGAGGAAGCGGCGGCGGCCAAGAAAC
AGAAGGTGGCGGGGTAGCCATAATTTCGGAGTCTGTGCCCCTTTCGGTCT
GGAACGTTCCGCGAATTTCTCTGCCCGTTCCGAAGAAAGAAGGCAGCAGC
GTAGACGAGCAAGAACAATGTAGCGGGTCACGTCGGGGTCGGCAACGCTT
TCGAGCCGGATCGGATCGTTCGGAGATTTTTTGTCACCGTTGGCAAGATC
AAGGCATACGGTCGGCTACGATTTTTTAGCGTAAAGCTGGGTTCAATCCC
ACGGATGACGAGCTGCTTCTGGACAGCCTCCTCATGTTTGCTGTTGCACA
AGAAAGCAATCGCCTTGCTAGATCTTGCGTGACGGCGTCGGGTGTGTGTG
CAGGCATAGGTGCGGAAAGAACAGTTGGCCTGAGAAACATGCAAAACCGT
GAATCGAAGACGAACACCGTCGTTACGGTTTGTCTGATGTTTTTTTTTTT
TTTTTTTGGGGGGGGGGCGCCGTGGCTTTCATACGCCTCAGGATTGTGCC
ACGATCAACAGCAGGCGGCAGGTTTGTGTAGAAGGAAACAAAGTTTCGAC
GCAAGCGCGGTGTTGGCGTGTCGAGGTTGATGTGGATTGTGATCGCAAGC
AGCGAGTATGGGGGGCAATTAGAGTTGTAGTGGATCTGGGTGTTCGGTAG
TACTTGGTGTATAGTTTACGCGCTCATGATTGTCGTTTCCAGTTGCAGTG
TTGATGACACCATCAGTGGCCTCAACCTCCCTGGTGCAGTGGACAATTTT
GTTTGTTTCGTTGTTGTTATTGGTGTAGAAAGCCGTGTTTTTTATCCGTA
AGGCTGTGTGGCTGTTTGTAGGACTCCAATCTCATCCCAATCCGACACGA
CGTGTGGCACACCTTGCAGACCATGCCAAGTGAATGACGCAAGGGTGAAA
CGAAAAAACACTATTACTACATGCTTACTGGATTGCGACTTTGGAGGAAG
GTGGGGGGTCCCCTTTTCGGTGTGCTGTTTGCCACGTAGAGAAGCACCTC
TCTCTATCTCTCTCTCACACACACTTTTCTATCTTTGATCCGGAGAATAG
ATTAATCTCCCCCATGCCGCCCCCTCACGGGGTCCCAGATAATGGCCTTT
AAAAGTGTTTCGTGTTCTCAACCGCACGAAGACTGACGTCTTTTCATTGG
TCAGCCGAATAGCGCGGTCGATGCAAATAATAAAAAAAAACACACAGATT
GCTGCGGCTTGGAGCCTCATGCAATCGTGTTCGTGCGTCGCGTGGTGCCT
CTCCTTCTCGTAAGTCGCCGCGCAGGAATTTCCGAGCCCACGCACAGGGC
AAAAAAAGGTGAACAATTCGGAAGGAAAGCCCATCCCCGTGAGACCGACA
GCTGGGTGTTTCTGTTTTTGGTACAATACTGTTTTTTTTTTCATGTCGCG
CACGAAAAACGTGCCGCCCCAGTACAAAACACGCGCCACCTTGCCAACAC
GAAACGCTGTTTGGTTTTCTACAACAAGTCAAGACCCAATCAAAACACAG
CTCATTATCTCCATGTAGCGAGTACAGCAATAACGAGACAACCGACAACG
CAAGAATGATGGCCCGCTTCTGGTTCGTCGTCGGCATTATCTTGCCAACA
GGGGTCTTCAACCCGACCCCCCTCGCCTCGTCCTCGTGGAACGCATCCAC
ATATTGTACAGCAGAGGGGAACAGCTTTTCACGCTCGCATCAGATCATTA
CATCATTGGTGGATCGCCCTTGCAGGACCCACGCGGGTTCCAAAAAAATT
AGTACGAAGTAAATATGCTTGATTTCTATGGGCAAGTCTCGTTGCCTAGT
TAAAGCATTCGGCTTTGGTGAGGGGCACCGATGTCCTCTGACCAATTACA
CCCAACTCCTGGCCTAGTTTAGACTAATACTATACATCGCTTTGGTGTTA
GAAAAATGCAAAGGAAGGGGTCTCGTGAGGATGGCTCACTCCGATGGAGA
AAGCCATGCACAACTGGTTCCCCCAGCCAACACTTTCTACCGCCCGCTGG
TCGAACACGGGAGTGGCTCGACAAAAACGCAGAACTAAAATCCGGGCTCC
CTCCCTCCCGACGATCCCACAGAAAACAAAGCAAGATCAACTTGAAAGGA
GTAGGAGTGCAACAGATCAACGCCATCGGAACTTAAACAACACAGGGAAG
GGTGTGCATCGTGCGTGATGCCACACACCCGCCTTGCTGAAAAGAAATTC
GACGGTTTCATAATTCCGTACGGCATTACAGGAACGACTACGACTACGGT
TACACGGCCGGAACAAGCGAATTCTGGAAAGCTCTCGACAAGAAGATACA
TGTCTCCAACGCTGCCAAAGATACGTATCGACGGTAACTATTATACCCCG
GCTTTGACGAAACAATGGTGTCAAGGCTCGTCAAGTGGTCAACTCGCACC
AGGGATGGGACGGGTTTGGTTCAAAAGCGTACAACGAACAAAAACAAAAC
CAGGCAGGAAGAGGCTGCAATCCGAGGTCTCTCGATCTGCACGCTACAGG
GAAGCAAGCGCGGAAAGGGACAGCTATTTAAGCTCTCTCCTCTACACCAA
CAACTGATCCCAATATCATTGAAATCAGGAAGAACACCAACAGGGGGAGT
CATCTACAGTACGTCCATACTGAAATAAACCTTTGGTTCTAGGGGTAGGG
AGGGGAAGGTGGGGGGGTTACGCTTCTACATCCTCCTCTTCCTCTTGAGG
CACACCAGCGAGTTCTTCCTCCATGGCCCGTATGCGCTTCATGACTGCCA
CCGCCTCCTTGGTGCGCTTTTCATCCTTCAGGTACATCGCCAAAAC
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protein sequence of Ec-27_006150.2

>Ec-27_006150.2 ID=Ec-27_006150.2|Name=Ec-27_006150.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=174bp
MTQGCRGGGKGSAGGAGNPWLSGISARESSGSRRKKGRLSARKCWRSRQR
TMRAWRRCWPSSSPTGGNVSPKSPASSSSGSSSHPLPRRHHPPPLPAEGS
STKEQPPSLLVSRPWGRSTLEPAICTSSSSTTSACTSTTITARKCETSRG
CRTTPRCRGPARPGTGRLRPGTS*
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mRNA from alignment at chr_27:5719263..5726458+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-27_006150.2 ID=Ec-27_006150.2|Name=Ec-27_006150.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=7196bp|location=Sequence derived from alignment at chr_27:5719263..5726458+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
CTCACACATTGCTCGCCGCCATGGCCCCGCTACAGCAACACGTGGCGCTT
CTGCCTGTGCTTGCGGCGGCTCTTTTGGCCTCTGTCACGGCCGGGAGAAG
CGGTGGTGGCCCCGTAGCTCCAGCTCTCCTACATGTACAACCCACAAGTC
AAGTCAGGTGCGCGCCAACTCACACAGCAACGTACTTATATGTACTTGCG
ATGCAAGACTGCTGTTGTTGACTACACTGCTGTAGTGCTTCGACCACATG
CCGCTACTGGTTCCAATACAAGGTCTTCCGAGCTGCTCGTGTTTTTCTTG
GTCCGTCGCAAGATGAAGGTGTACGTACAGGTGTTGCCGGGATGTGGATC
TTGACTTGAAGCCGTACGAACTAGCAGTGACAACAGGTGCAAAATAGACC
GTTTGTTCCAAGAGTCTCTTGTGTACCCATGGCAGGGTCGGTACCGAAAT
TGTGCCTGTGGCAGCAGTGTCGGAGAACTCACGCTACACAGTAGTCGCCC
GTTCGATTAAATGCAAAGCGGTCATGTATCCAGCAACGTGTATCCAAATA
ACGTTGTCGGCGTGATTTTTTCCGACAACCTCAATGACGTCACATCGATC
CTCGGATTGGAGTACTCCTCGCTTGAAGGTATTTTCTTCGTCAAAAACCG
TCGCTTCTTTTTCGTTGTTTGAAAAACAAAACAAAGAGTTTTATCTATGA
GAGTACCGTGCCGTTTTCCTCTGACGGAAGAGCTCCGGTTCGGCATTTCA
CAGAAAACTTCCTCTGCAGAGTTCCTGGCAACCGCGAGACTAGTAAAGTG
TGAAGCTTTATTCTTTGCCTAAAAATTACTGCTTGCACGATGTGGTTCCC
CCACGCACTTTCGCTGGCTGTTTCCACCACCAAACGCTGGCTCGTGTTGG
CGTTGGTCGTTGCCATGTGTCCTGTTGGCTACTGTCATGTTGATTATTGT
CATGTGACATGCCCAACCCTCCTTCGTGTTAAGGTTAACGTTGGCACCTT
CGTGTCAAAGGTTAAGGGTTGGGTTCGGGTTTGGTTGACACGCGGCGCCG
TTCTCGAGTTGAGTCTCCACCACTTGCGCCGCAGTGCTCATTCTTCACCC
CTGGGCCCTAACGTAGTGCGACGCCGCACAGTATATATCCTGATGCGGCA
AAACCCTTCGTGTCTTCCTGGAACCAAAAAGCCTTTCATCCTTGGAACCC
CCATTGCCCCTCTCAAAGCACCAGCACCAGCAGCGGCGGCGGCCTCCTGG
AGGAGAACACTCAGCACGCCGTCGGGAAGGAGAAGGTTGCCCGACAGCAT
GCGCTGCACACCTCTTCACCACAACCGCGGCAGCAAGAAGAAGAGGGGGA
GGAGGAGGAGCCGCTGAGGCGATCACAACAACAACGGTTTCAACGAAGGA
GGCGGGGGACGGGGAGGGGGGATCCGCAGCAGCCAGGGATAATGGGCGGA
GAGGCCACGGAGAGAAGAAGCCCTTTCGCCAAGCTGGCGGGGGTTGGCGA
CGGGCTCAGAGCTCGCGCGCGGCGGCTGCTGGTAGCCGAGGTGGAAGGGA
GGCAGAAACATGACGCAGGGGTGCCGAGGAGGAGGCAAGGGTTCGGCCGG
AGGGGCAGGGAATCCTTGGCTTTCGGGAATTTCGGCGCGCGAAAGCAGTG
GGTCAAGGAGGAAGAAGGGGAGGTTATCAGCGCGGAAATGTTGGCGGTGC
GTTTCAAGCCGGTGTGCGTGTGGGAATTGTTGTCGCAAGTGCGCACATCG
TGTTGTAGCTGTAGGCGGGGAAAGCTTGCCAAACAACTAGCCTGGGTGGC
AGTACGTACCCCGAAACGTCCCCTCCGTTCGTTTGTCAGCATCGCCACAA
CGGCACTTGGCAAAGTTTGGTTTCGTACTACGTACTGTACATGATGGCTT
ACGACCCCACGGTGAAATTAATTTTGCCGCCTTTGTTTTTTGGGCGCATC
AGGCTGAGACTTGGTGACATAGTGTAGATCAGAACTCACAGACAATTGAT
TTTGCGATCTATATCACCTTATCCACACGCTTGGTACCAACATTTCCGGG
TCACGACGCTACACAATAAGCCGCGGCACGAGCTGCGGTGGGTTTGCTCT
GTGCTGGTTTGGTGATCCGAGACAACGGTAGAGGGCACCGAAAGCAGCAA
CAACACCCGCAATCAACGATGCCCGCATCCCTCCCCTGGCCTCCCAGCTC
CAGGCAGAGAACGATGCGAGCGTGGAGGCGGTGTTGGCCGTCATCGAGTC
CGACGGGTGGGAACGTGTCACCGAAAAGTCCGGCGTCGTCGTCGTCCGGA
AGTTCGTCCCACCCCCTCCCAAGGCATGTAGGGATGCGAGGTCAATGGTC
TAGCGACTGCGGCTTGCACGATTGTATGAGTACACCGCCCTCCCAAGGCA
TGGATGTAGATAGAAGCATTATTTGTGTTGCAATATATCCGGCAACGTGA
TGAATCCGCCGGTTCGGTGAGATTGTTGTGAGTTATCTGTCGGTGGAGCT
TACTCTTCGAACAACCATGGCGATGAAACACGCAGCAGTATTTTTTTTGT
CGAACGGCATACAATAATGTCGAAAGTAAAACGTATCAAATGTTTTTCCA
TGGGCACCCCCCCACACACCTTACTCCCGGGGCCCCTTATTTAAAGTTCG
CTGTTGCATTCTTGGGGTATTGTAGGTTGTGGACGAAAGGCATGAACGGT
AGATAACTTTACGCCTGCGTGCTTGTCATTGGTACCTCCCCCCCCTCAAT
GCTCCATCATCTCGTGGTCAATGGTCTAGCAACCAAGACATGCAAAACGT
AAGTACGCCGCCCCCCCCCTCCCCCCATCACACTTGCATATACACCCTTC
CCCCCGTTTCCCTGTACTGGGGCATAGGAAATGGGTTGAAAAGGTGAGTA
GTGATGTCGATAGGATAGATGGTTAGGGGAAACAATTTTGAGCCAGCTTT
GGCAAAGTAGGAAGAGACGATTGGCCGTCGGTGATCGGTCCTGTGGAAAC
AACGTTCCGTCCCCTCGAGGACGCGTGGTCAATCGTCTAACCGCTAGGGT
ACGCAAAACATGAGAGTACGCCTCCCCCCGTTTCCCTGCGCAGGCGCCAT
CATCCTCCTCCTCTTCCAGCAGAGGGATCGTCGACGAAGGAGCAGCCGCC
AAGTTTGCTTGTGTCAAGGCCATGGGGACGCTCGACGCTCGAGCCAGCGA
TCTGTACAAGCTCTTCCTCGACAACGAGCGCGTGCACGTGAGTAGGGGGT
GCCGTGGTGTCGGAGCACGGGGGGGGGGGGGGGAAGCGTTACCCTTACGT
GTATTCACGCGCGCGTTGCCATGTTGCCATCGATGGCGTACATCGTCCTG
CTGTCTCTTTTTTTGTGCTCGTGTTTCCTGACTGGCGTTACGCGTTGCTG
CTAGACTTGTGCCAATCGCGCTCATCTTTCTGCGCCGCTGCCACATCTCT
CTCTGTTTTGTGGGCCTCCTCTCTCCCTCGCTCCGTCTATTGTTGCTCGT
CTGGATTTTGATACGACGACGCCCGGCGGGGACAGGAGTACAACGATAAC
TGCAAGGAAGTGCGAGACCTCGAGAGGCTGTCGGACGACACCAAGGTGTC
GTGGGCCTGCACGCCCAGGTACCGGCCGTTTAAGGCCAGGGACTTCGTGA
CCGCTGTCCACTACCGCACCCTGGAAGACGGAACGATGATGGTGCTCAAC
AGGCCCGTCGAGCACCCGGCGGCAAGGTGGGCCAATGGAAAATGTATTTT
TGCCGTACGTCGACAACGCACACGTCAATCCGGGGGCGTGGTCAGAAGGA
TGAGAAAGGAGGCGGTTTTGTAGCGGACGACCTCTGGCTACGCGCGGCGC
GGGGGGGCGTTATTTGGCCTTCAAGCAGAAGCGTCAGTTTTGCATCTGGC
TGGCTGGCAGGCAGCGGGGTAGACGTGCATGTTGTGCTGGTGCGCCTTTT
TCTTTCTTTTTGCGAGAGTCAACAACCATATTTCGGACAATGAAGCGTAG
AGGTTTCTATGCCACCCATGCTGAGGTAGTGGCGCTTTCTTCGCCGTGAA
CCCTACAGCTTCTTCGCAAATAGCCATATGCACATGCATGCGTTATTTCG
CGACGATACATCACAGCAACAATGACGTCACCGAAAACATTTACAGGCGC
GGGAAGAAGTACGTTCGAGCCGAGATCCTCATAGCGACCAACATCATGCG
GCCCAACCGCGAGGACCCCAGCAAGACCGACTTCATCTCGGTGACCCACA
TCAACCCCGGCGGCATAGCGGACTCGAGGATCGGGGCCAAGATAGTCAAC
AAGCTATGCGCCAAGGCGCCGGTGAACCTGCTCGTCGCCCTGGAACGTTC
CGCGAACTCGGCGCCCGTTCCGAAGGAGGAAGCGGCGGCGGCCAAGAAAC
AGAAGGTGGCGGGGTAGCCATAATTTCGGAGTCTGTGCCCCTTTCGGTCT
GGAACGTTCCGCGAATTTCTCTGCCCGTTCCGAAGAAAGAAGGCAGCAGC
GTAGACGAGCAAGAACAATGTAGCGGGTCACGTCGGGGTCGGCAACGCTT
TCGAGCCGGATCGGATCGTTCGGAGATTTTTTGTCACCGTTGGCAAGATC
AAGGCATACGGTCGGCTACGATTTTTTAGCGTAAAGCTGGGTTCAATCCC
ACGGATGACGAGCTGCTTCTGGACAGCCTCCTCATGTTTGCTGTTGCACA
AGAAAGCAATCGCCTTGCTAGATCTTGCGTGACGGCGTCGGGTGTGTGTG
CAGGCATAGGTGCGGAAAGAACAGTTGGCCTGAGAAACATGCAAAACCGT
GAATCGAAGACGAACACCGTCGTTACGGTTTGTCTGATGTTTTTTTTTTT
TTTTTTTGGGGGGGGGGCGCCGTGGCTTTCATACGCCTCAGGATTGTGCC
ACGATCAACAGCAGGCGGCAGGTTTGTGTAGAAGGAAACAAAGTTTCGAC
GCAAGCGCGGTGTTGGCGTGTCGAGGTTGATGTGGATTGTGATCGCAAGC
AGCGAGTATGGGGGGCAATTAGAGTTGTAGTGGATCTGGGTGTTCGGTAG
TACTTGGTGTATAGTTTACGCGCTCATGATTGTCGTTTCCAGTTGCAGTG
TTGATGACACCATCAGTGGCCTCAACCTCCCTGGTGCAGTGGACAATTTT
GTTTGTTTCGTTGTTGTTATTGGTGTAGAAAGCCGTGTTTTTTATCCGTA
AGGCTGTGTGGCTGTTTGTAGGACTCCAATCTCATCCCAATCCGACACGA
CGTGTGGCACACCTTGCAGACCATGCCAAGTGAATGACGCAAGGGTGAAA
CGAAAAAACACTATTACTACATGCTTACTGGATTGCGACTTTGGAGGAAG
GTGGGGGGTCCCCTTTTCGGTGTGCTGTTTGCCACGTAGAGAAGCACCTC
TCTCTATCTCTCTCTCACACACACTTTTCTATCTTTGATCCGGAGAATAG
ATTAATCTCCCCCATGCCGCCCCCTCACGGGGTCCCAGATAATGGCCTTT
AAAAGTGTTTCGTGTTCTCAACCGCACGAAGACTGACGTCTTTTCATTGG
TCAGCCGAATAGCGCGGTCGATGCAAATAATAAAAAAAAACACACAGATT
GCTGCGGCTTGGAGCCTCATGCAATCGTGTTCGTGCGTCGCGTGGTGCCT
CTCCTTCTCGTAAGTCGCCGCGCAGGAATTTCCGAGCCCACGCACAGGGC
AAAAAAAGGTGAACAATTCGGAAGGAAAGCCCATCCCCGTGAGACCGACA
GCTGGGTGTTTCTGTTTTTGGTACAATACTGTTTTTTTTTTCATGTCGCG
CACGAAAAACGTGCCGCCCCAGTACAAAACACGCGCCACCTTGCCAACAC
GAAACGCTGTTTGGTTTTCTACAACAAGTCAAGACCCAATCAAAACACAG
CTCATTATCTCCATGTAGCGAGTACAGCAATAACGAGACAACCGACAACG
CAAGAATGATGGCCCGCTTCTGGTTCGTCGTCGGCATTATCTTGCCAACA
GGGGTCTTCAACCCGACCCCCCTCGCCTCGTCCTCGTGGAACGCATCCAC
ATATTGTACAGCAGAGGGGAACAGCTTTTCACGCTCGCATCAGATCATTA
CATCATTGGTGGATCGCCCTTGCAGGACCCACGCGGGTTCCAAAAAAATT
AGTACGAAGTAAATATGCTTGATTTCTATGGGCAAGTCTCGTTGCCTAGT
TAAAGCATTCGGCTTTGGTGAGGGGCACCGATGTCCTCTGACCAATTACA
CCCAACTCCTGGCCTAGTTTAGACTAATACTATACATCGCTTTGGTGTTA
GAAAAATGCAAAGGAAGGGGTCTCGTGAGGATGGCTCACTCCGATGGAGA
AAGCCATGCACAACTGGTTCCCCCAGCCAACACTTTCTACCGCCCGCTGG
TCGAACACGGGAGTGGCTCGACAAAAACGCAGAACTAAAATCCGGGCTCC
CTCCCTCCCGACGATCCCACAGAAAACAAAGCAAGATCAACTTGAAAGGA
GTAGGAGTGCAACAGATCAACGCCATCGGAACTTAAACAACACAGGGAAG
GGTGTGCATCGTGCGTGATGCCACACACCCGCCTTGCTGAAAAGAAATTC
GACGGTTTCATAATTCCGTACGGCATTACAGGAACGACTACGACTACGGT
TACACGGCCGGAACAAGCGAATTCTGGAAAGCTCTCGACAAGAAGATACA
TGTCTCCAACGCTGCCAAAGATACGTATCGACGGTAACTATTATACCCCG
GCTTTGACGAAACAATGGTGTCAAGGCTCGTCAAGTGGTCAACTCGCACC
AGGGATGGGACGGGTTTGGTTCAAAAGCGTACAACGAACAAAAACAAAAC
CAGGCAGGAAGAGGCTGCAATCCGAGGTCTCTCGATCTGCACGCTACAGG
GAAGCAAGCGCGGAAAGGGACAGCTATTTAAGCTCTCTCCTCTACACCAA
CAACTGATCCCAATATCATTGAAATCAGGAAGAACACCAACAGGGGGAGT
CATCTACAGTACGTCCATACTGAAATAAACCTTTGGTTCTAGGGGTAGGG
AGGGGAAGGTGGGGGGGTTACGCTTCTACATCCTCCTCTTCCTCTTGAGG
CACACCAGCGAGTTCTTCCTCCATGGCCCGTATGCGCTTCATGACTGCCA
CCGCCTCCTTGGTGCGCTTTTCATCCTTCAGGTACATCGCCAAAAC
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Coding sequence (CDS) from alignment at chr_27:5719263..5726458+

>Ec-27_006150.2 ID=Ec-27_006150.2|Name=Ec-27_006150.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=522bp|location=Sequence derived from alignment at chr_27:5719263..5726458+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGACGCAGGGGTGCCGAGGAGGAGGCAAGGGTTCGGCCGGAGGGGCAGG
GAATCCTTGGCTTTCGGGAATTTCGGCGCGCGAAAGCAGTGGGTCAAGGA
GGAAGAAGGGGAGGTTATCAGCGCGGAAATGTTGGCGCTCCAGGCAGAGA
ACGATGCGAGCGTGGAGGCGGTGTTGGCCGTCATCGAGTCCGACGGGTGG
GAACGTGTCACCGAAAAGTCCGGCGTCGTCGTCGTCCGGAAGTTCGTCCC
ACCCCCTCCCAAGGCGCCATCATCCTCCTCCTCTTCCAGCAGAGGGATCG
TCGACGAAGGAGCAGCCGCCAAGTTTGCTTGTGTCAAGGCCATGGGGACG
CTCGACGCTCGAGCCAGCGATCTGTACAAGCTCTTCCTCGACAACGAGCG
CGTGCACGAGTACAACGATAACTGCAAGGAAGTGCGAGACCTCGAGAGGC
TGTCGGACGACACCAAGGTGTCGTGGGCCTGCACGCCCAGGTACCGGCCG
TTTAAGGCCAGGGACTTCGTGA
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Synonyms
The feature 'Ec-27_006150.2' has the following synonyms
Synonym
Esi0000_0067
Esi_0000_0067