Homology
BLAST of Ec-27_006130.1 vs. uniprot
Match:
A0A6H5JT04_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT04_9PHAE)
HSP 1 Score: 868 bits (2242), Expect = 1.160e-306
Identity = 458/500 (91.60%), Postives = 463/500 (92.60%), Query Frame = 2
Query: 437 EAFASFPFDATASLVRRKGSGTRPPVGWEVKSSQQLAASLRHPDPGAPGTTTPFGRDAAADCQAGALVAGQAQRRSGGGDIAGFRKVVPAGAGAVGSMETRECKAAAGAVRSPKSGDTLHMLAPPSDIGLVGRGGARGVFGTARIASSDARAAAAAAAEGQCVEDVVESGHAGPVLLLGRTKTKPLSPGPSHSTRGPHAHGENGEKHLEGGELGESLGKHDHFSACHRHRHXXXXXFHQHLSQEMKVCSSWTGSAQTDAPSIGSDDDNDDTAVRLRCGSGGSNCCSETAHVDSKACAKGAAALFVTEQQLATKAEAEVLPFSPLAERQNSAAVVSAVVSGADGSARANDETVVRVSELPDVCAICLGQYATGEEVHVLPCLHIFHAECLDVWIRGHPSCPYCKGDLNVIPQENNSSHETTAICYACSVLSRMVSFVAGPFVRFFRGLWERRRQQREQTAEGGGDREAGEGNEAAEGVVRFAPPALDSPAATPVPPSVVAA 1936
+AFASFPFDATASLVRRKGSGTRPPVGWEVKSSQQLAASLRHPDPG+PGTTTPFGRD C+AGALVAGQAQRRSGGGDI G RKVVPAGAGAVGSMETRE KAAAGAVRSPK GDTLHMLAPPSDIG VGRGGARG FGTARIASSDA A AAA AEGQCVEDVVESGHAGPVLLLGRTKTKPLSPGP HS GPHAHGENGEKHLE GELGESLGKHDHF ACHR XXX FHQHLSQEMKV SSWTGSAQTDAPSIGSDDDNDDTAVRLRCGSGGSNCCSETAHVDSKACAKGAAAL VTEQQLATKA AEVLP SPLAE QNSAA VS VVSGADGSARANDETVVRVSELPDVCAICLGQYATGEEVHVLPCLHIFHAECLDVWI GHPSCPYCKGDLNVIPQENNSS ETTAICYACSVLS MVSFV GP VRFFRG+WERRRQQREQTAEGGGDREAGEGNEAAEGVV FAPPAL+S AATPVPPSVVAA
Sbjct: 56 QAFASFPFDATASLVRRKGSGTRPPVGWEVKSSQQLAASLRHPDPGSPGTTTPFGRDPGGGCRAGALVAGQAQRRSGGGDITGCRKVVPAGAGAVGSMETRESKAAAGAVRSPKIGDTLHMLAPPSDIGQVGRGGARGAFGTARIASSDAGATAAATAEGQCVEDVVESGHAGPVLLLGRTKTKPLSPGPCHSADGPHAHGENGEKHLEVGELGESLGKHDHFLACHRXXXXXXRPFHQHLSQEMKVSSSWTGSAQTDAPSIGSDDDNDDTAVRLRCGSGGSNCCSETAHVDSKACAKGAAALLVTEQQLATKAGAEVLPLSPLAEHQNSAAAVSVVVSGADGSARANDETVVRVSELPDVCAICLGQYATGEEVHVLPCLHIFHAECLDVWICGHPSCPYCKGDLNVIPQENNSSSETTAICYACSVLSGMVSFVTGPLVRFFRGIWERRRQQREQTAEGGGDREAGEGNEAAEGVVSFAPPALESSAATPVPPSVVAA 555
BLAST of Ec-27_006130.1 vs. uniprot
Match:
D8LAX1_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAX1_ECTSI)
HSP 1 Score: 848 bits (2191), Expect = 1.800e-300
Identity = 460/557 (82.59%), Postives = 460/557 (82.59%), Query Frame = 2
Query: 266 MVAVVSQGYLCAIFVSIPPSGEEDDLVVILMSLHDSQATGRVVSYDPKPRGVTQINREAFASFPFDATASLVRRKGSGTRPPVGWEVKSSQQLAASLRHPDPGAPGTTTPFGRDAAADCQAGALVAGQAQRRSGGGDIAGFRKVVPAGAGAVGSMETRECKAAAGAVRSPKSGDTLHMLAPPSDIGLVGRGGARGVFGTARIASSDARAAAAAAAEGQCVEDVVESGHAGPVLLLGRTKTKPLSPGPSHSTRGPHAHGENGEKHLEGGELGESLGKHDHFSACHRHRHXXXXXFHQHLSQEMKVCSSWTGSAQTDAPSIGSDDDNDDTAVRLRCGSGGSNCCSETAHVDSKACAKGAAALFVTEQQLATKAEAEVLPFSPLAERQNSAAVVSAVVSGADGSARANDETVVRVSELPDVCAICLGQYATGEEVHVLPCLHIFHAECLDVWIRGHPSCPYCKGDLNVIPQENNSSHETTAICYACSVLSRMVSFVAGPFVRFFRGLWERRRQQREQTAEGGGDREAGEGNEAAEGVVRFAPPALDSPAATPVPPSVVAA 1936
MVAVVSQGYLCAIFVSIPP DPKPRGVTQINREAFASFPFDATASLVRRKGSGTRPPVGWEVKSSQQLAASLRHPDPGAPGTTTPFGRDAAADCQAGALVAGQAQRRSGGGDIAGFRKVVPAGAGAVGSMETRECKAAAGAVRSPKSGDTLHMLAPPSDIGLVGRGGARGVFGTARIASSDARAAAAAAAEGQCVEDVVESGHAGPVLLLGRTKTKPLSPGPSHSTRGPHAHGENGEKHLEGGELGESLGKHDHFSACHRHRH XXXXFHQHLSQEMKVCSSWTGSAQTDAPSIGSDDDNDDTAVRLR ANDETVVRVSELPDVCAICLGQYATGEEVHVLPCLHIFHAECLDVWIRGHPSCPYCKGDLNVIPQENNSSHETTAICYACSVLSRMVSFVAGPFVRFFRGLWERRRQQREQTAEGGGDREAGEGNEAAEGVVRFAPPALDSPAATPVPPSVVAA
Sbjct: 1 MVAVVSQGYLCAIFVSIPP--------------------------DPKPRGVTQINREAFASFPFDATASLVRRKGSGTRPPVGWEVKSSQQLAASLRHPDPGAPGTTTPFGRDAAADCQAGALVAGQAQRRSGGGDIAGFRKVVPAGAGAVGSMETRECKAAAGAVRSPKSGDTLHMLAPPSDIGLVGRGGARGVFGTARIASSDARAAAAAAAEGQCVEDVVESGHAGPVLLLGRTKTKPLSPGPSHSTRGPHAHGENGEKHLEGGELGESLGKHDHFSACHRHRHCXXXXFHQHLSQEMKVCSSWTGSAQTDAPSIGSDDDNDDTAVRLR----------------------------------------------------------------------ANDETVVRVSELPDVCAICLGQYATGEEVHVLPCLHIFHAECLDVWIRGHPSCPYCKGDLNVIPQENNSSHETTAICYACSVLSRMVSFVAGPFVRFFRGLWERRRQQREQTAEGGGDREAGEGNEAAEGVVRFAPPALDSPAATPVPPSVVAA 461
BLAST of Ec-27_006130.1 vs. uniprot
Match:
A0A836CLU7_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLU7_9STRA)
HSP 1 Score: 75.5 bits (184), Expect = 3.950e-12
Identity = 34/71 (47.89%), Postives = 44/71 (61.97%), Query Frame = 2
Query: 1487 TVVRVSELPDVCAICLGQYATGEEVHVLPC--LHIFHAECLDVWIRGHPSCPYCKGDLNVIPQENNSSHET 1693
T V SEL C ICLG Y TGE + LPC H++H EC+++W+ GH +CPYCK DL + +E S T
Sbjct: 64 TAVATSELQ--CVICLGDYTTGESLCRLPCPFQHVYHVECINLWLDGHSTCPYCKYDLMLAAEEEQSPSAT 132
BLAST of Ec-27_006130.1 vs. uniprot
Match:
A0A8C3ZMD8_9TELE (RING-type domain-containing protein n=1 Tax=Denticeps clupeoides TaxID=299321 RepID=A0A8C3ZMD8_9TELE)
HSP 1 Score: 72.8 bits (177), Expect = 6.400e-12
Identity = 27/45 (60.00%), Postives = 35/45 (77.78%), Query Frame = 2
Query: 1520 CAICLGQYATGEEVHVLPCLHIFHAECLDVWIRGHPSCPYCKGDL 1654
C ICL +Y GEE+ VLPCLH FHAEC+D W++ +PSCP C+ D+
Sbjct: 47 CRICLCEYTAGEELRVLPCLHDFHAECVDRWLQQNPSCPICRADV 91
BLAST of Ec-27_006130.1 vs. uniprot
Match:
A0A5E4F3R2_PRUDU (RING-type E3 ubiquitin transferase n=2 Tax=Prunus TaxID=3754 RepID=A0A5E4F3R2_PRUDU)
HSP 1 Score: 73.9 bits (180), Expect = 1.390e-11
Identity = 29/67 (43.28%), Postives = 46/67 (68.66%), Query Frame = 2
Query: 1475 ANDETVVRVSELPD-VCAICLGQYATGEEVHVLP-CLHIFHAECLDVWIRGHPSCPYCKGDLNVIPQ 1669
A+ + + V E+ D +CA+CL ++ GE + VLP C+H+FHAEC+D+W+ H +CP C+ D+ PQ
Sbjct: 73 AHHQLIPTVEEIKDGICAVCLCEFKDGEAIRVLPECMHLFHAECIDMWLSSHSNCPLCRTDIEPPPQ 139
BLAST of Ec-27_006130.1 vs. uniprot
Match:
A0A251NVP6_PRUPE (RING-type E3 ubiquitin transferase n=4 Tax=Prunus TaxID=3754 RepID=A0A251NVP6_PRUPE)
HSP 1 Score: 73.9 bits (180), Expect = 1.460e-11
Identity = 29/67 (43.28%), Postives = 46/67 (68.66%), Query Frame = 2
Query: 1475 ANDETVVRVSELPD-VCAICLGQYATGEEVHVLP-CLHIFHAECLDVWIRGHPSCPYCKGDLNVIPQ 1669
A+ + + V E+ D +CA+CL ++ GE + VLP C+H+FHAEC+D+W+ H +CP C+ D+ PQ
Sbjct: 75 AHHQLIPTVEEIKDGICAVCLCEFKDGEAIRVLPECMHLFHAECIDMWLSSHSNCPLCRTDIEPPPQ 141
BLAST of Ec-27_006130.1 vs. uniprot
Match:
A0A4Y1RQH7_PRUDU (RING-type E3 ubiquitin transferase n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1RQH7_PRUDU)
HSP 1 Score: 72.8 bits (177), Expect = 1.630e-11
Identity = 28/64 (43.75%), Postives = 44/64 (68.75%), Query Frame = 2
Query: 1484 ETVVRVSELPD-VCAICLGQYATGEEVHVLP-CLHIFHAECLDVWIRGHPSCPYCKGDLNVIPQ 1669
+ + V E+ D +CA+CL ++ GE + VLP C+H+FHAEC+D+W+ H +CP C+ D+ PQ
Sbjct: 46 QLIPTVEEIKDGICAVCLCEFKDGEAIRVLPECMHLFHAECIDMWLSSHSNCPLCRTDIEPPPQ 109
BLAST of Ec-27_006130.1 vs. uniprot
Match:
UPI000C1CE394 (RING-H2 finger protein ATL8-like n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1CE394)
HSP 1 Score: 74.7 bits (182), Expect = 2.020e-11
Identity = 33/56 (58.93%), Postives = 41/56 (73.21%), Query Frame = 2
Query: 1496 RVSELPDVCAICLGQYATGEEVHVLP-CLHIFHAECLDVWIRGHPSCPYCKGDLNV 1660
RV +L D CAIC+ ++A GEEV VLP C HIFH EC+D W+R H SCP C+ +L V
Sbjct: 101 RVEKLAD-CAICMAEFAAGEEVRVLPQCRHIFHVECVDTWLRSHSSCPSCRENLVV 155
BLAST of Ec-27_006130.1 vs. uniprot
Match:
D8LS07_ECTSI (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS07_ECTSI)
HSP 1 Score: 77.8 bits (190), Expect = 3.520e-11
Identity = 29/57 (50.88%), Postives = 40/57 (70.18%), Query Frame = 2
Query: 1490 VVRVSELPDVCAICLGQYATGEEVHVLPCLHIFHAECLDVWIRGHPSCPYCKGDLNV 1660
V+R SEL C++CL Y E V +LPC H++H EC+D+W+R H CPYC+ D+NV
Sbjct: 312 VIRASELNASCSVCLFGYFVDEAVTLLPCGHLYHTECIDIWMRDHVDCPYCRADMNV 368
BLAST of Ec-27_006130.1 vs. uniprot
Match:
A0A1E5VXG3_9POAL (RING-type domain-containing protein n=1 Tax=Dichanthelium oligosanthes TaxID=888268 RepID=A0A1E5VXG3_9POAL)
HSP 1 Score: 73.6 bits (179), Expect = 8.930e-11
Identity = 48/140 (34.29%), Postives = 70/140 (50.00%), Query Frame = 2
Query: 1253 VRLRCGSGGSNCCSETAHVDSKACAKGAAALFVTEQQLATKAEAEVLPFSPLAERQNSAAVVSAVVSGADGSARANDETVVRVSELPDVCAICLGQYATGEEVHVLP-CLHIFHAECLDVWIRGHPSCPYCKGDLNVIPQ 1669
+RL C C + H +S+ GA F+ + Q A + VLP P A V AV + +E R LP+ CA+CLG+ TGE V LP CLH+FH +C+D W+R H +CP C+ ++ +P+
Sbjct: 96 LRLPC-----RCAARLRHRNSRGGGSGALPQFMVQGQAAGLSSIYVLPREPPVR---GGARVVAVDDLPAYEQQQQEEDAKRPDGLPE-CAVCLGEVETGEMVKRLPGCLHMFHQQCIDPWLREHSTCPVCRYNVLTVPE 226
The following BLAST results are available for this feature:
Sequences
The following sequences are available for this feature:
mRNA sequence
>Ec-27_006130.1 ID=Ec-27_006130.1|Name=Ec-27_006130.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=604bp
MSWAAVMLFGSGLIFSTGLVWFFVQAWIFAIEAQTVWLIILLTVTTMVAV
VSQGYLCAIFVSIPPSGEEDDLVVILMSLHDSQATGRVVSYDPKPRGVTQ
INREAFASFPFDATASLVRRKGSGTRPPVGWEVKSSQQLAASLRHPDPGA
PGTTTPFGRDAAADCQAGALVAGQAQRRSGGGDIAGFRKVVPAGAGAVGS
METRECKAAAGAVRSPKSGDTLHMLAPPSDIGLVGRGGARGVFGTARIAS
SDARAAAAAAAEGQCVEDVVESGHAGPVLLLGRTKTKPLSPGPSHSTRGP
HAHGENGEKHLEGGELGESLGKHDHFSACHRHRHCHRRHFHQHLSQEMKV
CSSWTGSAQTDAPSIGSDDDNDDTAVRLRCGSGGSNCCSETAHVDSKACA
KGAAALFVTEQQLATKAEAEVLPFSPLAERQNSAAVVSAVVSGADGSARA
NDETVVRVSELPDVCAICLGQYATGEEVHVLPCLHIFHAECLDVWIRGHP
SCPYCKGDLNVIPQENNSSHETTAICYACSVLSRMVSFVAGPFVRFFRGL
WERRRQQREQTAEGGGDREAGEGNEAAEGVVRFAPPALDSPAATPVPPSV
VAA*
back to topspliced messenger RNA
>Ec-27_006130.1 ID=Ec-27_006130.1|Name=Ec-27_006130.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=3089bp|location=Sequence derived from alignment at chr_27:5699126..5705386- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.
CTTGCTGTCTCGGAAGTCGGCTCCGCCAGTACTACTGCGGTCCCGCGTAG
CACAGGAGTGTCCCAGACCTACAATGCAACACACAAGACAAGACTAATTC
TACACAGGTTGCCGAAACAGCGGAAACCATGAGCTGGGCTGCAGTGATGC
TGTTTGGGAGCGGCCTCATTTTCTCGACCGGTCTGGTGTGGTTCTTCGTT
CAGGCCTGGATCTTCGCGATCGAAGCGCAAACCGTATGGCTCATCATTCT
CCTCACGGTCACGACCATGGTCGCGGTTGTGTCGCAGGGGTACCTGTGCG
CGATTTTCGTCTCCATCCCACCGTCAGGTGAAGAGGACGACCTCGTAGTT
ATACTGATGAGCCTTCACGATTCTCAGGCAACTGGTCGCGTTGTTTCTTA
TGATCCCAAGCCCAGAGGGGTGACGCAAATCAACAGAGAGGCTTTCGCTT
CATTCCCCTTCGACGCCACCGCCAGCCTCGTCCGTCGGAAGGGGTCCGGC
ACAAGGCCACCGGTCGGCTGGGAGGTAAAGTCTTCCCAGCAGCTCGCCGC
CTCGCTTCGCCACCCCGACCCTGGAGCCCCCGGCACCACCACACCCTTCG
GCCGCGATGCCGCCGCCGATTGCCAAGCAGGTGCCCTAGTAGCGGGCCAA
GCTCAGCGACGAAGCGGCGGCGGCGACATCGCAGGCTTTAGAAAGGTTGT
ACCGGCGGGGGCGGGAGCGGTGGGAAGTATGGAAACCCGGGAGTGCAAGG
CGGCGGCGGGGGCGGTGCGTTCGCCGAAAAGTGGCGACACGCTGCACATG
TTGGCGCCGCCGTCCGATATCGGCCTGGTGGGTCGCGGTGGCGCGCGGGG
CGTGTTTGGAACGGCAAGGATTGCGTCGTCGGACGCCAGGGCTGCGGCGG
CTGCGGCGGCGGAGGGACAATGCGTCGAAGACGTGGTGGAGTCCGGTCAC
GCAGGACCGGTTCTATTGTTGGGCCGGACGAAGACGAAGCCGCTGTCGCC
AGGGCCCTCCCACTCCACCCGCGGACCCCACGCGCACGGCGAGAACGGGG
AGAAACATCTCGAGGGGGGGGAGTTGGGTGAGTCGCTGGGAAAGCACGAC
CACTTCTCAGCATGCCACAGGCATCGCCACTGTCACCGCCGCCATTTCCA
CCAGCACCTCAGCCAGGAGATGAAGGTTTGCAGCAGCTGGACCGGGTCGG
CACAAACAGACGCACCCAGCATCGGCTCCGACGACGACAACGACGACACG
GCCGTGCGGCTCAGGTGCGGCAGCGGTGGGTCGAACTGCTGCAGCGAAAC
AGCCCATGTTGACAGCAAGGCTTGCGCCAAAGGCGCAGCCGCGCTGTTTG
TGACGGAGCAGCAATTGGCGACGAAGGCGGAGGCCGAGGTACTGCCGTTT
TCGCCTTTGGCGGAGCGGCAGAATTCGGCGGCGGTTGTCTCTGCCGTCGT
TTCCGGCGCCGACGGAAGCGCCAGGGCGAACGACGAAACCGTGGTGCGCG
TGAGCGAGCTGCCGGACGTGTGCGCGATCTGCTTGGGGCAGTACGCCACA
GGGGAGGAGGTTCACGTGCTGCCCTGCCTGCACATATTTCACGCCGAGTG
CCTGGACGTCTGGATCCGCGGTCACCCGTCCTGCCCTTACTGCAAGGGTG
ACCTGAACGTTATCCCGCAAGAAAACAATTCGTCACACGAGACGACGGCA
ATATGTTATGCCTGCAGCGTGCTGTCTCGGATGGTGTCGTTCGTCGCCGG
GCCCTTCGTTCGGTTTTTCCGCGGACTCTGGGAGCGGCGGCGGCAGCAGC
GAGAGCAGACGGCCGAGGGTGGCGGGGACAGGGAGGCGGGAGAGGGGAAC
GAAGCTGCCGAAGGGGTTGTTAGGTTTGCTCCACCAGCGTTGGACTCTCC
GGCAGCGACACCCGTGCCGCCATCTGTGGTGGCAGCGTGAGATACTCGGC
ACACCTGTGTAAACGGGGCGCCTTTTCTGTTTGCTCGTTCAAAGATTTCG
CGATCGTTGTGATTTTTCATGTGTCCGTTTTTGTTCCAGGCGTGTGTGTG
GTGTTTACATGCGTAGAGGACGCGTGAAGAACCCCCTGATGAAGACTCGC
GTTGTGGTTGAACCTCTTTCAACAGCATTGCTTGCTGTTGCCTAGCTCTC
TTTGGTAGACTGGACAACCGGGGAAGCGACTACAACCAGGGAGCGGTCGG
TAGCTTAACTCATCCCCTGCCTAATCAATCCCAGCGGGTTGCAGCTCCCG
CCATATCCCATACCTGCTATTTCGTTTCCAAGAACAAACGTTGAGGTTCT
TGTACTCAAATTCCATGGCTAATCTGCAGCCCACCCTTGGAGTTGAACAC
ATGCAGTTACATGGAAAACCCATCATTCGAAGCATGGATCGAAGATAGAT
GTGCAAAACGTCGTAGTAGCGTGACAGTTCGCCCTCGCATAAGTTTAAAA
TAGATGAACAGAAGGCCATCGTCGTAAACTGAGTGCGCACTACAAGTCGC
GTACATGGTCAGGATACAATCCAGTCGTCGGCCCGACAGAAGACGAAGAA
CCTCGTAGAGAACAATGTGGCGCAAGATGCTGCACTGAACCGATCGTGCC
ACATTGGCGGAACAAGAACCTCACACCAGCACACCAAGGGCAAACTGAAA
AACAAAACCGCCTCGATTAATATATCTGATAGTGGAAAACCGATGGTGGT
GACATGTACGATGGTCTACGGTATATACTTACGACGGCAGATGCCCCAAC
ATGCAAAGTAGACAAAGAACGGGAATTAGTGTCACGTACAAAGGAACACA
GGGATCGACGGAAACTAATTATTCACATATTTCCTCGCAATTTCAAGTAC
CATGGATACGCTGGGAGCCAAACCACGCTCAGACTCAGGCACCGAAGAAA
TCGAAGACGGAAAGACAGAAAGTAATCCGCAAAGAAGGGTAGGTACTGCA
GAGGAGGCCGCAAACATGACTTCGCCGGTCCCCAAAATAGGACACATGGC
TCAAGTAACGCTGCATGGCCTCCGGGCCTGTGGCTCCTCCGTCCAAGCTC
CGTGGCGCTTGCTGAAGATACGTATGCAGAACTGGAGAA
back to topprotein sequence of Ec-27_006130.1
>Ec-27_006130.1 ID=Ec-27_006130.1|Name=Ec-27_006130.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=604bp
MSWAAVMLFGSGLIFSTGLVWFFVQAWIFAIEAQTVWLIILLTVTTMVAV
VSQGYLCAIFVSIPPSGEEDDLVVILMSLHDSQATGRVVSYDPKPRGVTQ
INREAFASFPFDATASLVRRKGSGTRPPVGWEVKSSQQLAASLRHPDPGA
PGTTTPFGRDAAADCQAGALVAGQAQRRSGGGDIAGFRKVVPAGAGAVGS
METRECKAAAGAVRSPKSGDTLHMLAPPSDIGLVGRGGARGVFGTARIAS
SDARAAAAAAAEGQCVEDVVESGHAGPVLLLGRTKTKPLSPGPSHSTRGP
HAHGENGEKHLEGGELGESLGKHDHFSACHRHRHCHRRHFHQHLSQEMKV
CSSWTGSAQTDAPSIGSDDDNDDTAVRLRCGSGGSNCCSETAHVDSKACA
KGAAALFVTEQQLATKAEAEVLPFSPLAERQNSAAVVSAVVSGADGSARA
NDETVVRVSELPDVCAICLGQYATGEEVHVLPCLHIFHAECLDVWIRGHP
SCPYCKGDLNVIPQENNSSHETTAICYACSVLSRMVSFVAGPFVRFFRGL
WERRRQQREQTAEGGGDREAGEGNEAAEGVVRFAPPALDSPAATPVPPSV
VAA*
back to topmRNA from alignment at chr_27:5699126..5705386-
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-27_006130.1 ID=Ec-27_006130.1|Name=Ec-27_006130.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=6261bp|location=Sequence derived from alignment at chr_27:5699126..5705386- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
CTTGCTGTCTCGGAAGTCGGCTCCGCCAGTACTACTGCGGTCCCGCGTAG
CACAGGAGTGTCCCAGACCTACAATGCAACACACAAGACAAGACTAATTC
TACACAGGTTGCCGAAACAGCGGAAACCATGAGCTGGGCTGCAGTGATGG
TGAGCGTCAGCGTGTCTCTCGGTGGCCGTTTATCCGAGTTGTTTGATCCT
CTGCAAGCACCCCAAACCTGTGTATCATCTCATATGTCCCGTGTGTGTAC
ATTTGATCCCGCCATAATTTGCACAAAGGCATACACGATCCAGCAAGTAC
CTTTGGCCCTTCCCGTCCGGGAAGGTCTTTGCTACACATGAATGATTCGA
ACTTCATATCTATTGACTCGCCTTATTCGACGGACTACCGTACATCAAGT
TTCCGTACGCCTGCCGGTTACACGCATCGACGCGTCGGACGTACGTCCAA
CTGCCCGCATGCATGCACCTCCCACCTGATGTTCATATATCCGAGCATGT
ACCCAAACCACGCAATCCTAATCCTTTAACCCGGTTGCCGTGTTCGAACA
CAAGATCATGATGCCGCGTGCAGTTGAGGTTGACATGGGCCTCTCACAAC
ATAGATGAAGTATCCAAGTCTGGAGATACTATTGTATACAGTCTACTTGT
ACTTCAGTACCAGTACAAAGCGAGTAGTTCTTTAAAAACTACAACCTACA
ATCGCTTTACCTCCAAATTCGACAAACTTTCCTTTTTTCGGCGTTTCAGC
GTTACCTTGCTCAGGCTATGCCTTCCCGATTCAATTTATTTGTGTTCAAG
TGCGTTTGGCAGGAACCTCATCGTACCTATGTAGTCTATTGTTCATGGTT
TGTAGCCTGTGGCCAAGGTGTCAACTTCTTCCCTTCCTCGAGTAGGAAGA
AGAGGTTGCCGTACAGAGGTCCGAACATTTTCTATTGTCAAGACAACAAT
AATACATCAACGCATGGAATCTGTTGGACGACTTGCGGAAGTACCATAGA
TAAGGCGTACAGCCAACCTCAAAGCCTTGATACGAGAATACGATACGGAG
TGTAACCCGCCCGCCAATTTATCGGCATGGGTAAGGCCGGGTACATCTAC
AATGATTGCCCTGTACGTATCGTCGGTAATTATCACGCCTGTTGAAGACC
AAGGCTACTTGGCTCTGCTTGTTTGTTGCTTTGTTTCCAGCACGTTTGAC
GGCTACTACACGCCAAGGAATGTAAGCGTCATTTTGTACTTGGAAGCGTT
CGCTACAGCGCATACCACAAAATGCAACCAGGAATGAAAAGACTAGACTG
AATAGTCCATAATATGGAGCAAGCGTATCAAGATGGGATAGGTGACCTAT
ACGGCACATCGAAACAGGTCGACCCAGGTGATGAACTGACGACATGCTTC
TGCCTCCTTTTTCTCCTGATCCAAACGTCGTTCCATGGGGTATGGCACAC
TTTGCACGGACATCCACGACGACGACAACAACAACAAATAAAAGCTGTTT
GGGAGCGGCCTCATTTTCTCGACCGGTCTGGTGTGGTTCTTCGTTCAGGC
CTGGATCTTCGCGATCGAAGCGCAAACCGTATGGCTCATCATTCTCCTCA
CGGTCACGACCATGGTCGCGGTTGTGTCGCAGGGGTACCTGTGCGCGATT
TTCGTCTCCATCCCACCGGTGAGTGAGTGCTTTCGAAGGCACAAACAGAT
AAGTGATTGCTGATTTTCTGTCCAAACCCCCACTACCATGATCGACGATT
GAATAACTGGAACACGGTGGAAGCTGCTGGCAGAGAACCTGCGTGAGATT
AGTTTGGAGTCCTAGACGTAGAACACGGAGGGGAATGCTGACACACTACG
AACACCTTTTGGAACGTTGCGTGAAAAAACAAGCGCAAGGATTTTGAAAA
AGCGAGTGCCGTCAGCGTTGGTGATCAACACCACGTAAGTTAATCACACG
CACATAGAAATAAGTGAGTTGGCTCGGCGTTACAAGCAAACACATGCTCG
CGCACTTTCCCTTTCGCACGACCAAACGCTACAGTCAGGTGAAGAGGACG
ACCTCGTAGTTATACTGATGAGCCTTCACGATTCTCAGGCAACTGGTCGC
GTTGTTTCTTATGTGAGAGCGCTGCACCGTAGTGTTAAACCTGGCCTTTA
GCTTTAGTCTCCATGCGCATGACGTTCTACCAAGTCGATGTACAGCAGGC
TAACTCTTGTTTAGGGGTGGACATACATGTAAAGAAGGGGTACATTCTAA
GATCCCTTTTGGACGGGATGTGCACAGTTTGCAGAAGATTTACAATGGTT
TTGCGATATTCGTTTCACGATAAAGTTTGGGGTCTACCGCCAATAACCCT
TTCCTGAATTTTTATCGTGCCAATGTGCGGCCGCTGGCATGCATCGGATT
TTGGCGGAGATGCTGACTGTTCTTGAACCGTTGCGTGTAGACTGAAACAC
CCTCTATCCGACCCCGCCTCCGCCTAGTACAAACCTCTTGGAGTCCGTTC
AACGCGACAATTAATTAACATGACACCCTAACTCCCCCCCTGTCGTTTTC
GTGCTTAATCAGGATCCCAAGCCCAGAGGGGTGACGCAAATCAACAGAGA
GGTACGTGAAGAAGTGCTGTAGGATGTCAGGCGAAGAGCATCAGAGGGCC
TAACACTCCCTAGCGAGAACTCAGATTGTTTTCAGACATTACATACTCAG
CGACATGCAATATACTAACCTTGCAATTTAGACTTATGACACTCCGTATT
CTTCGCATGGGTTTTCCAAAAACCCTGGAGCTGCTAGGGTATCTATCGCC
CGTATTGCACAACAAACACGAGCCCAAGTACACGGGGTCCCAGAACCGCG
CTGTAGCTGGGTGTAGGACAGGTGACTCTGTGCACAATCAATCTTGGGCT
GCACAGCTCTACGATGAAAAACACAGGGGTGGCTAAGTTTCGAGCCAAAC
AAGGCGCACATGGGTCCTAACCAGGGTTAGGATTTGCGAATGAGCCTCGT
GCACTTTATAAGTAATCAGAATTGGACCCCTTTTTGATGTTTCTCCTTGA
GCACTCTACTTCGCAGCAATAGCTAAACCACATGCAAAATGTTTTCGTCC
AACGTGTGTCATTCTTGGTAAGAGGGTCCGCGCGGCCTCCGCACACCACC
ACCACCAACGGTGCAAATGGGAGGCAGAAGTGCCCAATGAACTACGGGAC
AAAACGAAGTGTTGGGCGACAAAGCAGGCTAATCCCTCATTTCCGTGAGC
CAATCCGTTCATGCGACCTACCCCACTCTCCATCTGTTGCCACCGCCGCT
GAACCCCCCTCCCTCCCCCGCTCGCAGGCTTTCGCTTCATTCCCCTTCGA
CGCCACCGCCAGCCTCGTCCGTCGGAAGGGGTCCGGCACAAGGCCACCGG
TCGGCTGGGAGGTAAAGTCTTCCCAGCAGCTCGCCGCCTCGCTTCGCCAC
CCCGACCCTGGAGCCCCCGGCACCACCACACCCTTCGGCCGCGATGCCGC
CGCCGATTGCCAAGCAGGTGCCCTAGTAGCGGGCCAAGCTCAGCGACGAA
GCGGCGGCGGCGACATCGCAGGCTTTAGAAAGGTTGTACCGGCGGGGGCG
GGAGCGGTGGGAAGTATGGAAACCCGGGAGTGCAAGGCGGCGGCGGGGGC
GGTGCGTTCGCCGAAAAGTGGCGACACGCTGCACATGTTGGCGCCGCCGT
CCGATATCGGCCTGGTGGGTCGCGGTGGCGCGCGGGGCGTGTTTGGAACG
GCAAGGATTGCGTCGTCGGACGCCAGGGCTGCGGCGGCTGCGGCGGCGGA
GGGACAATGCGTCGAAGACGTGGTGGAGTCCGGTCACGCAGGACCGGTTC
TATTGTTGGGCCGGACGAAGACGAAGCCGCTGTCGCCAGGGCCCTCCCAC
TCCACCCGCGGACCCCACGCGCACGGCGAGAACGGGGAGAAACATCTCGA
GGGGGGGGAGTTGGGTGAGTCGCTGGGAAAGCACGACCACTTCTCAGCAT
GCCACAGGCATCGCCACTGTCACCGCCGCCATTTCCACCAGCACCTCAGC
CAGGAGATGAAGGTTTGCAGCAGCTGGACCGGGTCGGCACAAACAGACGC
ACCCAGCATCGGCTCCGACGACGACAACGACGACACGGCCGTGCGGCTCA
GGTGCGGCAGCGGTGGGTCGAACTGCTGCAGCGAAACAGCCCATGTTGAC
AGCAAGGCTTGCGCCAAAGGCGCAGCCGCGCTGTTTGTGACGGAGCAGCA
ATTGGCGACGAAGGCGGAGGCCGAGGTACTGCCGTTTTCGCCTTTGGCGG
AGCGGCAGAATTCGGCGGCGGTTGTCTCTGCCGTCGTTTCCGGCGCCGAC
GGAAGCGCCAGGGCGAACGACGAAACCGTGGTGCGCGTGAGCGAGCTGCC
GGACGTGTGCGCGATCTGCTTGGGGCAGTACGCCACAGGGGAGGAGGTTC
ACGTGCTGCCCTGCCTGCACATATTTCACGCCGAGGTGATTGCTTGGCTC
TCTCTGCCGGCAAGAGGAATCTTGCGTGACGTTCAGATCGCAGCAGAACA
TATCTACTGCTGTTGCAGAGACAGTTGCAGCTATAGGCTTCAACCGCTTT
GTGGTCTCTGCAACTCACGGGAGTCGTGACCTTAGCTCGCTTTCATTAAA
CTTGTTGTTGGTCAATCGTCTGTACGACCCTATAACCGTTCTTCTGGTGA
CGACGCCACTAATGCACCAAATCTCGCTGCGCCCCCCCCCCCCCCATCAA
TGGACCGATCGAATCATCAGTGCCTGGACGTCTGGATCCGCGGTCACCCG
TCCTGCCCTTACTGCAAGGGTGACCTGAACGTTATCCCGCAAGAAAACAA
TTCGTCACACGAGACGACGGCAATATGTTATGCCTGCAGCGTGCTGTCTC
GGATGGTGTCGTTCGTCGCCGGGCCCTTCGTTCGGTTTTTCCGCGGACTC
TGGGAGCGGCGGCGGCAGCAGCGAGAGCAGACGGCCGAGGGTGGCGGGGA
CAGGGAGGCGGGAGAGGGGAACGAAGCTGCCGAAGGGGTTGTTAGGTTTG
CTCCACCAGCGTTGGACTCTCCGGCAGCGACACCCGTGCCGCCATCTGTG
GTGGCAGCGTGAGATACTCGGCACACCTGTGTAAACGGGGCGCCTTTTCT
GTTTGCTCGTTCAAAGATTTCGCGATCGTTGTGATTTTTCATGTGTCCGT
TTTTGTTCCAGGCGTGTGTGTGGTGTTTACATGCGTAGAGGACGCGTGAA
GAACCCCCTGATGAAGACTCGCGTTGTGGTTGAACCTCTTTCAACAGCAT
TGCTTGCTGTTGCCTAGCTCTCTTTGGTAGACTGGACAACCGGGGAAGCG
ACTACAACCAGGGAGCGGTCGGTAGCTTAACTCATCCCCTGCCTAATCAA
TCCCAGCGGGTTGCAGCTCCCGCCATATCCCATACCTGCTATTTCGTTTC
CAAGAACAAACGTTGAGGTTCTTGTACTCAAATTCCATGGCTAATCTGCA
GCCCACCCTTGGAGTTGAACACATGCAGTTACATGGAAAACCCATCATTC
GAAGCATGGATCGAAGATAGATGTGCAAAACGTCGTAGTAGCGTGACAGT
TCGCCCTCGCATAAGTTTAAAATAGATGAACAGAAGGCCATCGTCGTAAA
CTGAGTGCGCACTACAAGTCGCGTACATGGTCAGGATACAATCCAGTCGT
CGGCCCGACAGAAGACGAAGAACCTCGTAGAGAACAATGTGGCGCAAGAT
GCTGCACTGAACCGATCGTGCCACATTGGCGGAACAAGAACCTCACACCA
GCACACCAAGGGCAAACTGAAAAACAAAACCGCCTCGATTAATATATCTG
ATAGTGGAAAACCGATGGTGGTGACATGTACGATGGTCTACGGTATATAC
TTACGACGGCAGATGCCCCAACATGCAAAGTAGACAAAGAACGGGAATTA
GTGTCACGTACAAAGGAACACAGGGATCGACGGAAACTAATTATTCACAT
ATTTCCTCGCAATTTCAAGTACCATGGATACGCTGGGAGCCAAACCACGC
TCAGACTCAGGCACCGAAGAAATCGAAGACGGAAAGACAGAAAGTAATCC
GCAAAGAAGGGTAGGTACTGCAGAGGAGGCCGCAAACATGACTTCGCCGG
TCCCCAAAATAGGACACATGGCTCAAGTAACGCTGCATGGCCTCCGGGCC
TGTGGCTCCTCCGTCCAAGCTCCGTGGCGCTTGCTGAAGATACGTATGCA
GAACTGGAGAA
back to topCoding sequence (CDS) from alignment at chr_27:5699126..5705386-
>Ec-27_006130.1 ID=Ec-27_006130.1|Name=Ec-27_006130.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1812bp|location=Sequence derived from alignment at chr_27:5699126..5705386- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGAGCTGGGCTGCAGTGATGCTGTTTGGGAGCGGCCTCATTTTCTCGAC
CGGTCTGGTGTGGTTCTTCGTTCAGGCCTGGATCTTCGCGATCGAAGCGC
AAACCGTATGGCTCATCATTCTCCTCACGGTCACGACCATGGTCGCGGTT
GTGTCGCAGGGGTACCTGTGCGCGATTTTCGTCTCCATCCCACCGTCAGG
TGAAGAGGACGACCTCGTAGTTATACTGATGAGCCTTCACGATTCTCAGG
CAACTGGTCGCGTTGTTTCTTATGATCCCAAGCCCAGAGGGGTGACGCAA
ATCAACAGAGAGGCTTTCGCTTCATTCCCCTTCGACGCCACCGCCAGCCT
CGTCCGTCGGAAGGGGTCCGGCACAAGGCCACCGGTCGGCTGGGAGGTAA
AGTCTTCCCAGCAGCTCGCCGCCTCGCTTCGCCACCCCGACCCTGGAGCC
CCCGGCACCACCACACCCTTCGGCCGCGATGCCGCCGCCGATTGCCAAGC
AGGTGCCCTAGTAGCGGGCCAAGCTCAGCGACGAAGCGGCGGCGGCGACA
TCGCAGGCTTTAGAAAGGTTGTACCGGCGGGGGCGGGAGCGGTGGGAAGT
ATGGAAACCCGGGAGTGCAAGGCGGCGGCGGGGGCGGTGCGTTCGCCGAA
AAGTGGCGACACGCTGCACATGTTGGCGCCGCCGTCCGATATCGGCCTGG
TGGGTCGCGGTGGCGCGCGGGGCGTGTTTGGAACGGCAAGGATTGCGTCG
TCGGACGCCAGGGCTGCGGCGGCTGCGGCGGCGGAGGGACAATGCGTCGA
AGACGTGGTGGAGTCCGGTCACGCAGGACCGGTTCTATTGTTGGGCCGGA
CGAAGACGAAGCCGCTGTCGCCAGGGCCCTCCCACTCCACCCGCGGACCC
CACGCGCACGGCGAGAACGGGGAGAAACATCTCGAGGGGGGGGAGTTGGG
TGAGTCGCTGGGAAAGCACGACCACTTCTCAGCATGCCACAGGCATCGCC
ACTGTCACCGCCGCCATTTCCACCAGCACCTCAGCCAGGAGATGAAGGTT
TGCAGCAGCTGGACCGGGTCGGCACAAACAGACGCACCCAGCATCGGCTC
CGACGACGACAACGACGACACGGCCGTGCGGCTCAGGTGCGGCAGCGGTG
GGTCGAACTGCTGCAGCGAAACAGCCCATGTTGACAGCAAGGCTTGCGCC
AAAGGCGCAGCCGCGCTGTTTGTGACGGAGCAGCAATTGGCGACGAAGGC
GGAGGCCGAGGTACTGCCGTTTTCGCCTTTGGCGGAGCGGCAGAATTCGG
CGGCGGTTGTCTCTGCCGTCGTTTCCGGCGCCGACGGAAGCGCCAGGGCG
AACGACGAAACCGTGGTGCGCGTGAGCGAGCTGCCGGACGTGTGCGCGAT
CTGCTTGGGGCAGTACGCCACAGGGGAGGAGGTTCACGTGCTGCCCTGCC
TGCACATATTTCACGCCGAGTGCCTGGACGTCTGGATCCGCGGTCACCCG
TCCTGCCCTTACTGCAAGGGTGACCTGAACGTTATCCCGCAAGAAAACAA
TTCGTCACACGAGACGACGGCAATATGTTATGCCTGCAGCGTGCTGTCTC
GGATGGTGTCGTTCGTCGCCGGGCCCTTCGTTCGGTTTTTCCGCGGACTC
TGGGAGCGGCGGCGGCAGCAGCGAGAGCAGACGGCCGAGGGTGGCGGGGA
CAGGGAGGCGGGAGAGGGGAACGAAGCTGCCGAAGGGGTTGTTAGGTTTG
CTCCACCAGCGTTGGACTCTCCGGCAGCGACACCCGTGCCGCCATCTGTG
GTGGCAGCGTGA
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