Ec-27_006040.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-27_006040.1
Unique NameEc-27_006040.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length206
Homology
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BLAST of Ec-27_006040.1 vs. uniprot
Match: A0A6H5JRN4_9PHAE (NYN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRN4_9PHAE)

HSP 1 Score: 344 bits (882), Expect = 6.860e-112
Identity = 177/185 (95.68%), Postives = 181/185 (97.84%), Query Frame = 1 
Query:  148 MMAANEQGVQGNAAGERKQRVGVFVDVENVLGWLKRGGCTELLAKAGELGVVGIRRAFGDFSNATVASRQDELQRHGFDLVHTVHPAKGKSNSADISMTIDVMESCRGPDIQWVMLATGDSDFGPVFRRLRELGKGVVGVGPSSVLSSSVALSCHEFIFTDDSSSSRRSGSTKKGRGKGGKGDRS 702
            MMAA+EQGVQGNAAGERKQRVGVFVDVENVLGWLKRGGCTELLAKAGELGVVGIRRAFGDFSNATVASRQDELQRHGFDLVHTVHPAKGKSNSADISMTIDVMESCRGPDIQWV+LATGDSDFGPVFRRLRELGKGV+GVGPSSVLSSSVALSCHEFIFTDDS+SSR SGS  KGR KGGKGDRS
Sbjct:    1 MMAADEQGVQGNAAGERKQRVGVFVDVENVLGWLKRGGCTELLAKAGELGVVGIRRAFGDFSNATVASRQDELQRHGFDLVHTVHPAKGKSNSADISMTIDVMESCRGPDIQWVVLATGDSDFGPVFRRLRELGKGVIGVGPSSVLSSSVALSCHEFIFTDDSNSSR-SGSANKGRRKGGKGDRS 184
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BLAST of Ec-27_006040.1 vs. uniprot
Match: D8LAX9_ECTSI (NYN domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAX9_ECTSI)

HSP 1 Score: 216 bits (550), Expect = 2.030e-65
Identity = 108/109 (99.08%), Postives = 108/109 (99.08%), Query Frame = 1 
Query:  148 MMAANEQGVQGNAAGERKQRVGVFVDVENVLGWLKRGGCTELLAKAGELGVVGIRRAFGDFSNATVASRQDELQRHGFDLVHTVHPAKGKSNSADISMTIDVMESCRGP 474
            MMAANEQGVQGNAAGERKQRVGVFVDVENVLGWLKRGGCTELLAKAGELGVVGIRRAFGDFSNATVASRQDELQRHGFDLVHTVHPAKGKSNSADISMTIDVMESCR P
Sbjct:    1 MMAANEQGVQGNAAGERKQRVGVFVDVENVLGWLKRGGCTELLAKAGELGVVGIRRAFGDFSNATVASRQDELQRHGFDLVHTVHPAKGKSNSADISMTIDVMESCRTP 109
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BLAST of Ec-27_006040.1 vs. uniprot
Match: B4VU65_9CYAN (HTH OST-type domain-containing protein n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 TaxID=118168 RepID=B4VU65_9CYAN)

HSP 1 Score: 169 bits (427), Expect = 1.430e-46
Identity = 88/147 (59.86%), Postives = 109/147 (74.15%), Query Frame = 1 
Query:  202 QRVGVFVDVENVLGWLKRGGCTELLAKAGELGVVGIRRAFGDFSNATVASRQDELQRHGFDLVHTVHPAKGKSNSADISMTIDVMES-CRGPDIQWVMLATGDSDFGPVFRRLRELGKGVVGVGPSSVLSSSVALSCHEFIFTDDSS 639
            ++V +F+DVEN+ GWLK  G   LL +A ELG V +RRA+GDFS A+V+ RQ EL   GF+ VH  HP KGK NSADI + +DVME   R PD++WV+LATGDSDF P+FRRLRELGK VVGVGP S LS +V  SC+ FI+ D+ S
Sbjct:    3 EKVAIFLDVENLSGWLKVDGGEALLERANELGRVVVRRAYGDFSIASVSVRQPELNLLGFEFVHVYHPVKGK-NSADIQIVVDVMEYLARIPDLEWVVLATGDSDFSPLFRRLRELGKSVVGVGPRSALSEAVKKSCNRFIYIDEES 148
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BLAST of Ec-27_006040.1 vs. uniprot
Match: A0A6H9GN88_MICAE (HTH OST-type domain-containing protein n=5 Tax=Microcystis aeruginosa TaxID=1126 RepID=A0A6H9GN88_MICAE)

HSP 1 Score: 169 bits (427), Expect = 1.530e-46
Identity = 87/145 (60.00%), Postives = 108/145 (74.48%), Query Frame = 1 
Query:  202 QRVGVFVDVENVLGWLKRGGCTELLAKAGELGVVGIRRAFGDFSNATVASRQDELQRHGFDLVHTVHPAKGKSNSADISMTIDVMES-CRGPDIQWVMLATGDSDFGPVFRRLRELGKGVVGVGPSSVLSSSVALSCHEFIFTDD 633
            ++V +F+DVEN+ GWLK  G   LL +A ELG V +RRA+GDFS A+V+ RQ EL   GF+ VH  HP KGK NSADI + +DVME   R PD++WV+LATGDSDF P+FRRLRELGK VVGVGP S LS +V  SC+ FI+ D+
Sbjct:    3 EKVAIFLDVENLSGWLKADGGEALLERANELGRVVVRRAYGDFSIASVSVRQPELNLLGFEFVHVYHPVKGK-NSADIQIVVDVMEYLARIPDLEWVVLATGDSDFSPLFRRLRELGKSVVGVGPRSALSEAVKKSCNRFIYIDE 146
[Close]
BLAST of Ec-27_006040.1 vs. uniprot
Match: A0A2W7ACP4_9CYAN (HTH OST-type domain-containing protein n=1 Tax=Leptolyngbya sp. TaxID=47254 RepID=A0A2W7ACP4_9CYAN)

HSP 1 Score: 168 bits (426), Expect = 2.780e-46
Identity = 89/156 (57.05%), Postives = 111/156 (71.15%), Query Frame = 1 
Query:  205 RVGVFVDVENVLGWLKRGGCTELLAKAGELGVVGIRRAFGDFSNATVASRQDELQRHGFDLVHTVHPAKGKSNSADISMTIDVMES-CRGPDIQWVMLATGDSDFGPVFRRLRELGKGVVGVGPSSVLSSSVALSCHEFIFTDDSSSSRRSGSTKK 669
            +V +F+DVEN+ GWLK  G   LL +A ELG V +RRA+GDFS   V +RQ EL   GF+ VH  HPAKGK NSADI + +DVME   R PD++W++LATGDSDF P+FRRLRE+GK VVGVGP SVLS +V  SC+ FI+ ++   S  S  T K
Sbjct:    4 KVAIFLDVENLSGWLKSDGGEALLERANELGRVVVRRAYGDFSIPAVIARQTELNLLGFEFVHVYHPAKGK-NSADIQIVVDVMEYLARIPDLEWIVLATGDSDFSPLFRRLREMGKSVVGVGPRSVLSEAVKKSCNRFIYINEKQESNSSPLTSK 158
[Close]
BLAST of Ec-27_006040.1 vs. uniprot
Match: K9F5K4_9CYAN (HTH OST-type domain-containing protein n=1 Tax=Leptolyngbya sp. PCC 7375 TaxID=102129 RepID=K9F5K4_9CYAN)

HSP 1 Score: 167 bits (423), Expect = 5.950e-46
Identity = 86/146 (58.90%), Postives = 108/146 (73.97%), Query Frame = 1 
Query:  205 RVGVFVDVENVLGWLKRGGCTELLAKAGELGVVGIRRAFGDFSNATVASRQDELQRHGFDLVHTVHPAKGKSNSADISMTIDVMES-CRGPDIQWVMLATGDSDFGPVFRRLRELGKGVVGVGPSSVLSSSVALSCHEFIFTDDSS 639
            +V +F+DVEN+ GWLK  G   LL +A ELG V +RRA+GDFS  ++++RQ EL   GF+ VH  HP KGK NSADI + +DVME   R PD++WV+LATGDSDF P+FRRLRELGK VVGVGP S LS +V  SC+ FI+ D+ S
Sbjct:    4 KVAIFLDVENLSGWLKADGGESLLDRANELGRVVVRRAYGDFSIPSISARQIELNLLGFEFVHVYHPVKGK-NSADIQIVVDVMEYIARIPDLEWVILATGDSDFSPLFRRLRELGKSVVGVGPQSALSEAVKKSCNRFIYIDEKS 148
[Close]
BLAST of Ec-27_006040.1 vs. uniprot
Match: A0A1C0V8K5_9CYAN (HTH OST-type domain-containing protein n=3 Tax=unclassified Limnothrix TaxID=2632864 RepID=A0A1C0V8K5_9CYAN)

HSP 1 Score: 167 bits (423), Expect = 6.350e-46
Identity = 87/146 (59.59%), Postives = 107/146 (73.29%), Query Frame = 1 
Query:  205 RVGVFVDVENVLGWLKRGGCTELLAKAGELGVVGIRRAFGDFSNATVASRQDELQRHGFDLVHTVHPAKGKSNSADISMTIDVMES-CRGPDIQWVMLATGDSDFGPVFRRLRELGKGVVGVGPSSVLSSSVALSCHEFIFTDDSS 639
            +V +F+DVEN+ GWLK  G   LL +A ELG V +RRA+GDFS  +V+ RQ EL   GF+ VH  HP KGK NSADI + +DVME   R PD++WV+LATGDSDF P+FRRLRELGK VVGVGP S LS +V  SC+ FI+ D+ S
Sbjct:    4 KVAIFLDVENLSGWLKADGGETLLERANELGRVVVRRAYGDFSIQSVSVRQPELNLLGFEFVHVYHPVKGK-NSADIQIVVDVMEYLARVPDLEWVVLATGDSDFSPLFRRLRELGKSVVGVGPRSALSEAVKKSCNRFIYIDEES 148
[Close]
BLAST of Ec-27_006040.1 vs. uniprot
Match: K9ZNR7_ANACC (Uncharacterized protein n=2 Tax=Anabaena TaxID=1163 RepID=K9ZNR7_ANACC)

HSP 1 Score: 166 bits (419), Expect = 2.990e-45
Identity = 84/143 (58.74%), Postives = 105/143 (73.43%), Query Frame = 1 
Query:  205 RVGVFVDVENVLGWLKRGGCTELLAKAGELGVVGIRRAFGDFSNATVASRQDELQRHGFDLVHTVHPAKGKSNSADISMTIDVMESC-RGPDIQWVMLATGDSDFGPVFRRLRELGKGVVGVGPSSVLSSSVALSCHEFIFTD 630
            +VG+F+D+EN+ GWLK  G   LL +A ELG V +RRA+GDFS  +V+ RQ EL   GF+ VH  HP KGK NSADI + +DVME   R PD+QW +LATGD+DF P+FRRL+ELGK VVG+GP S LS  V  SC+ FI+TD
Sbjct:    4 KVGIFLDIENLAGWLKLDGGETLLDRASELGSVVVRRAYGDFSLPSVSKRQSELNLLGFEFVHVYHPVKGK-NSADIQIVVDVMEYLTRVPDLQWFVLATGDADFSPLFRRLKELGKSVVGIGPKSKLSEVVKKSCNRFIYTD 145
[Close]
BLAST of Ec-27_006040.1 vs. uniprot
Match: UPI0017466E78 (NYN domain-containing protein n=1 Tax=Phormidium tenue TaxID=126344 RepID=UPI0017466E78)

HSP 1 Score: 165 bits (417), Expect = 4.280e-45
Identity = 87/149 (58.39%), Postives = 107/149 (71.81%), Query Frame = 1 
Query:  202 QRVGVFVDVENVLGWLKRGGCTELLAKAGELGVVGIRRAFGDFSNATVASRQDELQRHGFDLVHTVHPAKGKSNSADISMTIDVMESC-RGPDIQWVMLATGDSDFGPVFRRLRELGKGVVGVGPSSVLSSSVALSCHEFIFTDDSSSS 645
            ++V +F+DVEN+ GWLK  G   LL  A ELG V +RRA+GDFSN  V+ RQ EL   GF+ V   HP KGK NSADI + +DVME   R PD++W++LATGDSDF P+FRRLREL K VVGVGP SVLS +V  SC +FI+ D+  SS
Sbjct:    3 EKVAIFLDVENLSGWLKADGGATLLEHASELGRVVVRRAYGDFSNPAVSVRQPELNLLGFEFVQVYHPVKGK-NSADIQIVVDVMEYLTRIPDLEWIVLATGDSDFSPLFRRLRELDKSVVGVGPRSVLSEAVKKSCSQFIYIDEGFSS 150
[Close]
BLAST of Ec-27_006040.1 vs. uniprot
Match: UPI00168003E0 (NYN domain-containing protein n=1 Tax=Leptolyngbya sp. FACHB-36 TaxID=2692808 RepID=UPI00168003E0)

HSP 1 Score: 164 bits (416), Expect = 6.410e-45
Identity = 84/145 (57.93%), Postives = 107/145 (73.79%), Query Frame = 1 
Query:  202 QRVGVFVDVENVLGWLKRGGCTELLAKAGELGVVGIRRAFGDFSNATVASRQDELQRHGFDLVHTVHPAKGKSNSADISMTIDVMES-CRGPDIQWVMLATGDSDFGPVFRRLRELGKGVVGVGPSSVLSSSVALSCHEFIFTDD 633
            ++V +F+DVEN+ GWLK  G   LL +A ELG V +RRA+GDFS  +V+ RQ EL   GF+ VH  HP KGK NSADI + +DVME   R PD++WV+LATGDSDF P+FRRLRELGK V+GVGP S LS +V  +C+ FI+ D+
Sbjct:    3 EKVAIFLDVENLSGWLKADGGETLLERANELGRVVVRRAYGDFSILSVSVRQPELNLLGFEFVHVYHPVKGK-NSADIQIVVDVMEYLARIPDLEWVVLATGDSDFSPLFRRLRELGKSVMGVGPRSALSEAVKRTCNRFIYIDE 146
The following BLAST results are available for this feature:
BLAST of Ec-27_006040.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JRN4_9PHAE6.860e-11295.68NYN domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LAX9_ECTSI2.030e-6599.08NYN domain-containing protein n=1 Tax=Ectocarpus s... [more]
B4VU65_9CYAN1.430e-4659.86HTH OST-type domain-containing protein n=1 Tax=Col... [more]
A0A6H9GN88_MICAE1.530e-4660.00HTH OST-type domain-containing protein n=5 Tax=Mic... [more]
A0A2W7ACP4_9CYAN2.780e-4657.05HTH OST-type domain-containing protein n=1 Tax=Lep... [more]
K9F5K4_9CYAN5.950e-4658.90HTH OST-type domain-containing protein n=1 Tax=Lep... [more]
A0A1C0V8K5_9CYAN6.350e-4659.59HTH OST-type domain-containing protein n=3 Tax=unc... [more]
K9ZNR7_ANACC2.990e-4558.74Uncharacterized protein n=2 Tax=Anabaena TaxID=116... [more]
UPI0017466E784.280e-4558.39NYN domain-containing protein n=1 Tax=Phormidium t... [more]
UPI00168003E06.410e-4557.93NYN domain-containing protein n=1 Tax=Leptolyngbya... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_27contigchr_27:5632074..5635496 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score171.4
Seed ortholog evalue4.4e-40
Seed eggNOG ortholog118168.MC7420_6127
Length766
Gene idEc-27_006040.1
EggNOG free text desc.NYN domain
EggNOG OGs1G3NN@1117,1HHNU@1150,COG1432@1,COG1432@2
COG Functional cat.S
Best tax levelOscillatoriales
Best eggNOG OGNA|NA|NA
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-27_006040Ec-27_006040Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_27 5632074..5635496 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_006040.1.1Ec-27_006040.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5632074..5632305 +
Ec-27_006040.1.2Ec-27_006040.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5634189..5634424 +
Ec-27_006040.1.3Ec-27_006040.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5635199..5635496 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_0060405UTR:Ec-27_006040.1Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_27 5632074..5632221 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_006040.1CDS:Ec-27_006040.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_27 5632222..5632305 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_006040.1Ec-27_006040.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_27 5632222..5635496 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-27_006040.1 ID=Ec-27_006040.1|Name=Ec-27_006040.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=206bp
MMAANEQGVQGNAAGERKQRVGVFVDVENVLGWLKRGGCTELLAKAGELG
VVGIRRAFGDFSNATVASRQDELQRHGFDLVHTVHPAKGKSNSADISMTI
DVMESCRGPDIQWVMLATGDSDFGPVFRRLRELGKGVVGVGPSSVLSSSV
ALSCHEFIFTDDSSSSRRSGSTKKGRGKGGKGDRSXXXXXXXXXXXXXXX
XXXXXX
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spliced messenger RNA

>Ec-27_006040.1 ID=Ec-27_006040.1|Name=Ec-27_006040.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=766bp|location=Sequence derived from alignment at chr_27:5632074..5635496+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
TTTGAATTTAGTTGCCCGGAGTCCTGGGGGCTACGTGGTTCAGCAAATCT
CATAGGGTAGCCCGTGTGCGGGCAAGTAACACCGCTTGTAGAATCAAAGA
CCCCACGCCGCAGCAGACACACAAATTATTGTGCGACGAACCGAGAAGAT
GATGGCTGCTAACGAACAGGGAGTGCAAGGGAATGCAGCAGGCGAGAGAA
AACAACGAGTCGGCGTATTCGTCGATGTCGAGAATGTTCTGGGGTGGCTC
AAGCGAGGCGGCTGTACGGAGCTGCTCGCGAAGGCCGGCGAGCTCGGGGT
AGTGGGCATCCGGCGCGCCTTTGGCGACTTCTCGAACGCGACCGTGGCCT
CGAGGCAGGACGAGCTGCAGAGGCACGGGTTCGACCTCGTGCACACGGTG
CACCCGGCCAAGGGGAAGAGCAACTCGGCGGACATCAGCATGACGATAGA
CGTGATGGAGAGCTGCAGGGGCCCGGACATCCAGTGGGTCATGCTTGCCA
CCGGAGACTCCGACTTCGGCCCGGTGTTCCGCCGCCTGCGAGAGCTCGGG
AAGGGTGTAGTCGGCGTCGGACCCTCCTCCGTCCTGAGCTCGTCAGTCGC
GCTCTCGTGCCACGAGTTCATCTTTACCGACGACAGCAGCAGCAGCAGGA
GGAGCGGCAGCACCAAGAAGGGGAGAGGGAAGGGCGGAAAGGGGGACCGC
TCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNN
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protein sequence of Ec-27_006040.1

>Ec-27_006040.1 ID=Ec-27_006040.1|Name=Ec-27_006040.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=206bp
MMAANEQGVQGNAAGERKQRVGVFVDVENVLGWLKRGGCTELLAKAGELG
VVGIRRAFGDFSNATVASRQDELQRHGFDLVHTVHPAKGKSNSADISMTI
DVMESCRGPDIQWVMLATGDSDFGPVFRRLRELGKGVVGVGPSSVLSSSV
ALSCHEFIFTDDSSSSRRSGSTKKGRGKGGKGDRSXXXXXXXXXXXXXXX
XXXXXX
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mRNA from alignment at chr_27:5632074..5635496+

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-27_006040.1 ID=Ec-27_006040.1|Name=Ec-27_006040.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=3423bp|location=Sequence derived from alignment at chr_27:5632074..5635496+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
TTTGAATTTAGTTGCCCGGAGTCCTGGGGGCTACGTGGTTCAGCAAATCT
CATAGGGTAGCCCGTGTGCGGGCAAGTAACACCGCTTGTAGAATCAAAGA
CCCCACGCCGCAGCAGACACACAAATTATTGTGCGACGAACCGAGAAGAT
GATGGCTGCTAACGAACAGGGAGTGCAAGGGAATGCAGCAGGCGAGAGAA
AACAACGAGTCGGCGTATTCGTCGATGTCGAGGTGAGAGTCAAGAAGTTC
TAGAAAACGATCACCGTGTTGTGTGTGCTACAGCAGTACTTCGGGTATGT
TTCAGAGTCTCCCCGTCTTCCTCACAGCCGACACAATAAAATTATTGCCT
AGGACCAAAACTAAAGAGCGCCAGGTGTCGTTGGTGAAAAACGACCGAGT
TCCGAGAACATCAGGGGGGGAGGGACGAGCGCATTGTGCTGCTTGGTAAG
GCCGGTAAATGCTTGACGTTCCGTGTACGATTTCGTTCTATATTGGCAAC
GGTGCTGGATACCAGTTTCCACTGAAACTTTTAGGCAACAGCAACGACCG
CGCGTCCATCTCACCCATCTCCCCCGTTCAGGCGACACACACAAACACAG
ATGAAGGGCTACCTATGAGCTTGCAGAGATATGAGTATGGAGAGGAAATT
CGTCGTGTCAGTGCTGGGCTTGCCCATGTGCCACCGCGGTGTTGACGAGG
CGCATGGGGTAGTGTTCAATTCAGACCCGATAGCAGTAGTAGTCAGGCCG
ACTTCTCTGTGTCATCGTCTCGAATGATGGGTTCATTCTTATATTTTTTT
AGGCACAGACTTGTCTAATTGGCGAAACATCAGGTTGACTGTTGTGTAAT
TTTTACCCGTGTCTCGATGGGTTCTCTAGTTTGGAAGGGGGCCTCGGCAG
CTAGCGAGCTCCCTCTATGAGGGGTCGTGATTTCATTATTTTTAAGGTTT
CGTGAAGTCTTCGGCTTCGCGGTCGACGAGGGAAGGGGATGGCTGAACGC
TTGTGGCGATAACAACTACGGCGAGCATCGCAGGGGGAAAGGCGGGGCAA
TAAACAAAAACAATAAAAAAAGGTAGAGGTGGATTCGTTGAAACCTCCTC
TCCTCTTCGTGTGACCCCGACCGATACGTCAGGTACATCCGCCAAAAGGC
CTGTAAACCGGCGCCAGAATAGATGTGACGCACACACGCGCACTCCCTCG
TTTACCATATATGACACAAGATAACACACCTACATAAGAAAGCACACCCC
CCACAGAATACGACACCCCGGTGATAGTTTTGGGCGCTTCTGACAAACCA
TCGATTTATCACCGGGGGTACATAAGATAGCACACCCCAGTGATATTTTT
AGTTACGCCGCATATGGTCACGGGCCCCCTCCTTCTTTATCACCGAGGTG
ACAGCATCTGCCCTGGGCAATCACACACACAACCACGTCAGCTGTGTGCG
GGGAAACACCCCGCATGGAGACCCCGAACAACATGAACGTGCAGGCAGAG
CAGAATCTGTGGCCACCGCCAATCATCGTATCGGTCGAGGTACCTTCGAA
TTGTATTTTTTTTCTTGCTCGATTCAAGCCCGTATTTTGTTTCAAACTTT
TTTTGGCGATGGGAGGGTTGAGTTATCGCCGAGGTAATGTGCTCAGGAGT
TTCGTCACCTCGGTTGAGCCCCTTTGTTTTTCCACGCCCCTTTAGGCAGG
TCCCTACACTGCACGTGTACGTGCAGGCATGGCTATCACACACCCTTTTA
TCACACACCTTCATTTATCACACCCCAAAGCACACGCTGTGGCTGTTCGG
ACGTGCTATCACACCCCCTTTTCATCACACACCCTCATTTATCACACCCC
CAAACACACGCTGTGGCTGTTCGGACGCGCTATCACACCCCCTGTTTTAT
CACACCCCCTTAGGGGCCCCTGCGAGCTGCACTTTATCACCCGGGGTACA
CAAGATAACACACCCCCCACAGGATACCACAACGGGTGATAATATTTTCA
AACTCCAAAATGTTATCACCGGGGTGTGCTATCTTGTGTCATACACGGTA
ATGGTATGCATATGTGTACGTGTGTCTTCATCCTTACTTCCCCCCCTGAC
ACGCACAACAATCAGAATGTTCTGGGGTGGCTCAAGCGAGGCGGCTGTAC
GGAGCTGCTCGCGAAGGCCGGCGAGCTCGGGGTAGTGGGCATCCGGCGCG
CCTTTGGCGACTTCTCGAACGCGACCGTGGCCTCGAGGCAGGACGAGCTG
CAGAGGCACGGGTTCGACCTCGTGCACACGGTGCACCCGGCCAAGGGGAA
GAGCAACTCGGCGGACATCAGCATGACGATAGACGTGATGGAGAGCTGCA
GGTGAGAGAGAGGAGAGAGAGCAGGCGTGGAACGTTGGTTGGTTTGTCTC
TGCTGTGTCTTCTTTAGGTCCGCCGACGTCTACAGCAGTAGCTGAAGATT
GTTCTCAGCGAAGGGTGTGCGGTTTCAGTTTAGACGACCACCTGGTATAG
TCCGTTCTCACCTACGCTTGTTGTGTTGGTTTGCGGGCACCTGCTGGCTC
TAAAAGTATGTAGCGATTTGATCACCCTTGCCCTTTGCGAAACACTTGTC
CGTCATGCGTAGTTGCGGGTTGACGTCATGGCGCAGACGCCGCCCTTTGG
GGGGGGGATTGTTGCCGGGTCTGGACACGGTCGTACGATGCTGCGAAAGA
AACCTTATCCTCGTTGGTTGGAATGGCAGGTCCGGTATGTTTTGCTTCAG
CTGGGAGAGGAGGCAGAGGCGGAAGCGGACGGCCCATTGCTTGTCCGCTC
CAATCAGTCGAATGAAATCAGGGGCACTCACACTAATGTCATCGATCAGA
CTCTCTCATGCGCGCACAAATGGCCGTACTAGACTTTCACCACTTGGAAT
GAAAACGTTCGGAAGCTCCTCGCTCATCTCCGGCCTCTCTCTCCCTTCCC
CTTGTCTCTCTCTACCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTTCTGTCGCTCTTGTGCCCCCCAC
ACGTGCCACTTCCACCACCGCCATTCCGCGCGCGGACAACCATCACCTCC
CCACAAAACCCCGCCGTGTCGCAAGGGGCCCGGACATCCAGTGGGTCATG
CTTGCCACCGGAGACTCCGACTTCGGCCCGGTGTTCCGCCGCCTGCGAGA
GCTCGGGAAGGGTGTAGTCGGCGTCGGACCCTCCTCCGTCCTGAGCTCGT
CAGTCGCGCTCTCGTGCCACGAGTTCATCTTTACCGACGACAGCAGCAGC
AGCAGGAGGAGCGGCAGCACCAAGAAGGGGAGAGGGAAGGGCGGAAAGGG
GGACCGCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNN
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Coding sequence (CDS) from alignment at chr_27:5632074..5635496+

>Ec-27_006040.1 ID=Ec-27_006040.1|Name=Ec-27_006040.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=618bp|location=Sequence derived from alignment at chr_27:5632074..5635496+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGATGGCTGCTAACGAACAGGGAGTGCAAGGGAATGCAGCAGGCGAGAG
AAAACAACGAGTCGGCGTATTCGTCGATGTCGAGAATGTTCTGGGGTGGC
TCAAGCGAGGCGGCTGTACGGAGCTGCTCGCGAAGGCCGGCGAGCTCGGG
GTAGTGGGCATCCGGCGCGCCTTTGGCGACTTCTCGAACGCGACCGTGGC
CTCGAGGCAGGACGAGCTGCAGAGGCACGGGTTCGACCTCGTGCACACGG
TGCACCCGGCCAAGGGGAAGAGCAACTCGGCGGACATCAGCATGACGATA
GACGTGATGGAGAGCTGCAGGGGCCCGGACATCCAGTGGGTCATGCTTGC
CACCGGAGACTCCGACTTCGGCCCGGTGTTCCGCCGCCTGCGAGAGCTCG
GGAAGGGTGTAGTCGGCGTCGGACCCTCCTCCGTCCTGAGCTCGTCAGTC
GCGCTCTCGTGCCACGAGTTCATCTTTACCGACGACAGCAGCAGCAGCAG
GAGGAGCGGCAGCACCAAGAAGGGGAGAGGGAAGGGCGGAAAGGGGGACC
GCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNN
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Synonyms
The feature 'Ec-27_006040.1' has the following synonyms
Synonym
Esi0000_0082
Esi_0000_0082