Ec-27_005790.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-27_005790.1
Unique NameEc-27_005790.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length397
Homology
[Close]
BLAST of Ec-27_005790.1 vs. uniprot
Match: D8LAZ9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LAZ9_ECTSI)

HSP 1 Score: 801 bits (2069), Expect = 3.560e-293
Identity = 396/396 (100.00%), Postives = 396/396 (100.00%), Query Frame = 1 
Query:    1 MPGPFSVAEDPGDFHIFNVHHGFPEGLVRGYRTGFLTDMDYNNLCQCESLEDVKLNLQETDYDQFLSQENKVTPAALQERATKKLVVEFNFLKAQAQEPLSTFLEYITYEYMIENIMMLLKGTLSGRDVNELIEQCHPMGLFKDSTMRLIPAFEASPKGYADLYQTVLVDTPIGPYFSQFLEQQQERLTNAAQVRDILEEVEIEIIKNSLMKLYLEDFHRFCKSVGGDTSTVMCELLEARADRGAINITLNSFGGPLNEPSMRSTDRRRLYPAIGTLYPEATNLFQEVGDESQLAAVLDMYPVYRGIWAVHQNEAYGDKSIDDAFFERDVDMLELAFQGQMHFGPFYAYVKLKEQEIRNLVWISECIVQQQRDEIGKYIPLFSENASWKVARRAGR 1188
            MPGPFSVAEDPGDFHIFNVHHGFPEGLVRGYRTGFLTDMDYNNLCQCESLEDVKLNLQETDYDQFLSQENKVTPAALQERATKKLVVEFNFLKAQAQEPLSTFLEYITYEYMIENIMMLLKGTLSGRDVNELIEQCHPMGLFKDSTMRLIPAFEASPKGYADLYQTVLVDTPIGPYFSQFLEQQQERLTNAAQVRDILEEVEIEIIKNSLMKLYLEDFHRFCKSVGGDTSTVMCELLEARADRGAINITLNSFGGPLNEPSMRSTDRRRLYPAIGTLYPEATNLFQEVGDESQLAAVLDMYPVYRGIWAVHQNEAYGDKSIDDAFFERDVDMLELAFQGQMHFGPFYAYVKLKEQEIRNLVWISECIVQQQRDEIGKYIPLFSENASWKVARRAGR
Sbjct:    1 MPGPFSVAEDPGDFHIFNVHHGFPEGLVRGYRTGFLTDMDYNNLCQCESLEDVKLNLQETDYDQFLSQENKVTPAALQERATKKLVVEFNFLKAQAQEPLSTFLEYITYEYMIENIMMLLKGTLSGRDVNELIEQCHPMGLFKDSTMRLIPAFEASPKGYADLYQTVLVDTPIGPYFSQFLEQQQERLTNAAQVRDILEEVEIEIIKNSLMKLYLEDFHRFCKSVGGDTSTVMCELLEARADRGAINITLNSFGGPLNEPSMRSTDRRRLYPAIGTLYPEATNLFQEVGDESQLAAVLDMYPVYRGIWAVHQNEAYGDKSIDDAFFERDVDMLELAFQGQMHFGPFYAYVKLKEQEIRNLVWISECIVQQQRDEIGKYIPLFSENASWKVARRAGR 396
[Close]
BLAST of Ec-27_005790.1 vs. uniprot
Match: A0A836CAY8_9STRA (V0 complex, c/d subunit of ATPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAY8_9STRA)

HSP 1 Score: 619 bits (1595), Expect = 7.020e-221
Identity = 299/398 (75.13%), Postives = 346/398 (86.93%), Query Frame = 1 
Query:   10 PFSVAEDPGDFHIFNVHHGFPEGLVRGYRTGFLTDMDYNNLCQCESLEDVKLNLQETDYDQFLSQENKVTPAALQERATKKLVVEFNFLKAQAQEPLSTFLEYITYEYMIENIMMLLKGTLSGRDVNELIEQCHPMGLFKDSTMRLIPAFEASPKGYADLYQTVLVDTPIGPYFSQFLEQQQER------LTNAAQVRDILEEVEIEIIKNSLMKLYLEDFHRFCKSVGGDTSTVMCELLEARADRGAINITLNSFGGPLNEPSMRSTDRRRLYPAIGTLYPEATNLFQEVGDESQLAAVLDMYPVYRGIWAVHQNEAYGDKSIDDAFFERDVDMLELAFQGQMHFGPFYAYVKLKEQEIRNLVWISECIVQQQRDEIGKYIPLFSENASWKVARRAG 1185
            P++  EDPGD   FNVH+GFPE LVRG+++GFLT+ DYNNLCQCE+L+DV+LNLQE+DYDQF+S + KVTPA +QE+A  K+V EFNF+KAQAQEPL TFLEYI YEYMIEN+M+LLKGTLSGR+V ELI+QCHP+GLF  +TM+LIP FEASPKGYADLYQTVL+DTPIG YFS+FLE+ +          NA  VR +LEEVEIEIIKNSLMKLYLEDF+RFC+ +GGDT+ VMC LL ARADR AINITLNSFGGPLNEP MR+TDRRRLYPAIGTLYPEAT+ F EV DE+QLAAVL+ +PV+R IWAVH NE +G KSIDDAF+ERDV+MLELAF+GQMHFGPFYAYVKLKEQEIRNLVWI ECIVQ+QRDEI K++PLFSENA W+VARR G
Sbjct:    2 PYTDPEDPGDIASFNVHNGFPEALVRGFKSGFLTEADYNNLCQCENLDDVRLNLQESDYDQFMSAQTKVTPALVQEKAILKMVKEFNFIKAQAQEPLVTFLEYIQYEYMIENVMLLLKGTLSGRNVEELIDQCHPLGLFAPATMKLIPLFEASPKGYADLYQTVLIDTPIGDYFSRFLEEHKPTGQDAAGAENAGMVRHVLEEVEIEIIKNSLMKLYLEDFYRFCEKIGGDTAEVMCALLGARADRNAINITLNSFGGPLNEPHMRTTDRRRLYPAIGTLYPEATSDFTEVSDEAQLAAVLEPFPVFREIWAVHLNENFGHKSIDDAFYERDVEMLELAFEGQMHFGPFYAYVKLKEQEIRNLVWIGECIVQRQRDEIHKFVPLFSENAPWRVARRGG 399
[Close]
BLAST of Ec-27_005790.1 vs. uniprot
Match: F0XZC2_AURAN (V-type proton ATPase subunit n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZC2_AURAN)

HSP 1 Score: 556 bits (1434), Expect = 1.070e-196
Identity = 266/376 (70.74%), Postives = 320/376 (85.11%), Query Frame = 1 
Query:   46 IFNVHHGFPEGLVRGYRTGFLTDMDYNNLCQCESLEDVKLNLQETDYDQFLSQENKVTPAALQERATKKLVVEFNFLKAQAQEPLSTFLEYITYEYMIENIMMLLKGTLSGRDVNELIEQCHPMGLFKDSTMRLIPAFEASPKGYADLYQTVLVDTPIGPYFSQFLEQQQERLTNAAQVRDILEEVEIEIIKNSLMKLYLEDFHRFCKSVGGDTSTVMCELLEARADRGAINITLNSFGGPLNEPSMRSTDRRRLYPAIGTLYPEATNLFQEVGDESQLAAVLDMYPVYRGIWAVHQNEAYGDKSIDDAFFERDVDMLELAFQGQMHFGPFYAYVKLKEQEIRNLVWISECIVQQQRDEIGKYIPLFSENASWKVA 1173
            + N  HG  E L RG+RTGFL+D DY++L QCESLEDVK+NL ETDYD FL+ E  V+PA + E ATKK+V EF FL+AQA EPL+TFL+YIT+EYMI+N+M+LLKGT+SGRDV ELIEQCHP+G+F+DSTMR IP FE SPKGYADLYQTVLVDTP+GPYFS+FL++  E+LT+AA+VR++LEEVE+EIIK+SLMKLYLEDF+ FC SVGGDT+ +M E+L+ARAD+ AINITLNSFG PLNEPSMRSTDR+RLYP+IG LYP  T    +V DE QL A +  +PVYR IWAVHQNE+  D+SIDDAF+ER+V MLELAF+GQMHFG +YAYVKLKEQEIRNLVWISECIVQQQ+DEI K++P FS  A W+ +
Sbjct:    6 LHNRDHGMTEALCRGFRTGFLSDTDYHHLTQCESLEDVKMNLAETDYDAFLANEASVSPAVILECATKKMVAEFQFLRAQAVEPLATFLDYITFEYMIDNVMLLLKGTISGRDVGELIEQCHPLGMFRDSTMRSIPTFENSPKGYADLYQTVLVDTPVGPYFSRFLQESSEKLTSAAEVRNVLEEVEMEIIKHSLMKLYLEDFYYFCCSVGGDTAEIMGEILKARADQRAINITLNSFGTPLNEPSMRSTDRKRLYPSIGFLYPAGTEKLADVADEGQLGAAVSHFPVYREIWAVHQNESVDDRSIDDAFYEREVQMLELAFEGQMHFGIYYAYVKLKEQEIRNLVWISECIVQQQKDEINKFVPCFSSTAPWRAS 381
[Close]
BLAST of Ec-27_005790.1 vs. uniprot
Match: A0A7S3ZVT8_9STRA (V-type proton ATPase subunit n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZVT8_9STRA)

HSP 1 Score: 530 bits (1364), Expect = 4.750e-186
Identity = 254/374 (67.91%), Postives = 309/374 (82.62%), Query Frame = 1 
Query:   46 IFNVHHGFPEGLVRGYRTGFLTDMDYNNLCQCESLEDVKLNLQETDYDQFLSQENKVTPAALQERATKKLVVEFNFLKAQAQEPLSTFLEYITYEYMIENIMMLLKGTLSGRDVNELIEQCHPMGLFKDSTMRLIPAFEASPKGYADLYQTVLVDTPIGPYFSQFLEQQQERLTNAAQVRDILEEVEIEIIKNSLMKLYLEDFHRFCKSVGGDTSTVMCELLEARADRGAINITLNSFGGPLNEPSMRSTDRRRLYPAIGTLYPEATNLFQEVGDESQLAAVLDMYPVYRGIWAVHQNEAYGDKSIDDAFFERDVDMLELAFQGQMHFGPFYAYVKLKEQEIRNLVWISECIVQQQRDEIGKYIPLFSENASWK 1167
            + N   G  E LVRG+RTGFL D DY++L QCE+LEDVK+NL ETDYDQFL+    V PA + E+AT K+V EF +L+AQA EPL+TFL+YITYEYMI+N+M+LLKGTLSGRDV ELIEQCHP+GLF+DSTMR IPAFE SPKGYADLYQ VLVDTP+GPYFSQFL +  ER+ +A++VR +LEEVE+EI+K+SLMKLYLEDF  FC+S+GGDT+ VM E+L ARAD+ AIN+TLNSFG PLNEP MRS +RRRLYP+IG LYP  T+   E  DE  L   ++ +P+YR I+A H NE   D+SIDDAF+ER+V MLELAF+GQMHFG +YAYVKLKEQE+RNLVWISECIVQQQ+DEI K++P FS++A W+
Sbjct:    7 VHNRDFGMTEALVRGFRTGFLKDSDYHHLTQCETLEDVKMNLAETDYDQFLADAPVVNPAVILEKATGKMVAEFKYLRAQAVEPLATFLDYITYEYMIDNVMLLLKGTLSGRDVGELIEQCHPLGLFRDSTMRSIPAFENSPKGYADLYQLVLVDTPVGPYFSQFLAESAERIGSASEVRHVLEEVELEIVKHSLMKLYLEDFAAFCQSIGGDTAEVMGEILNARADQRAINVTLNSFGTPLNEPQMRSRERRRLYPSIGFLYPAGTHKLAEASDEQALGNAINWHPMYREIYAAHVNEGVDDRSIDDAFYEREVRMLELAFEGQMHFGIYYAYVKLKEQEVRNLVWISECIVQQQKDEINKFVPCFSKSAPWR 380
[Close]
BLAST of Ec-27_005790.1 vs. uniprot
Match: A0A5D6XZX1_9STRA (V-type proton ATPase subunit n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XZX1_9STRA)

HSP 1 Score: 521 bits (1342), Expect = 1.560e-182
Identity = 253/385 (65.71%), Postives = 316/385 (82.08%), Query Frame = 1 
Query:   34 GDFHIFNVHHGFPEGLVRGYRTGFLTDMDYNNLCQCESLEDVKLNLQETDYDQFLSQENK-VTPAALQERATKKLVVEFNFLKAQAQEPLSTFLEYITYEYMIENIMMLLKGTLSGRDVNELIEQCHPMGLFKDSTMRLIPAFEASPKGYADLYQTVLVDTPIGPYFSQFLEQQQ--ERLTNAAQVRDILEEVEIEIIKNSLMKLYLEDFHRFCKSVGGDTSTVMCELLEARADRGAINITLNSFGGPLNEPSMRSTDRRRLYPAIGTLYPEATNLFQEVGDESQLAAVLDMYPVYRGIWAVHQNEAYGDKSIDDAFFERDVDMLELAFQGQMHFGPFYAYVKLKEQEIRNLVWISECIVQQQRDEIGKYIPLFSENASWKVARR 1179
            G    FNV HG+ E LVRG R+GFL D+DY++L QCESLEDVKLNLQETDYDQFL+ E+  ++P+ +Q   T KLV EFNFL+AQA EPL+ FL+YITYEYMI+N+++LLKGTL+GRDVNELI+Q HP+G F +S MR I AFE + KGY+DLY+TVL+DTPIG YFSQFLE+    +R+   + VR++LEEV++E+IKNS++KL+LEDF+ FC+ VGGDT+ +M E+L+ARADR AINITLNSFG PLNEP+MR +DR+ LYP+IG LYPEAT L  E GDE+ L AVL+ YPVYR IW VHQ+E   +KSIDDAF+ERDV M ELAFQ QMHFG F+AYVKLKEQE+RNLVWISECIVQ+QRD I  +IP+FS++A W+  ++
Sbjct:    6 GGIAAFNVQHGYVEALVRGLRSGFLDDVDYHHLTQCESLEDVKLNLQETDYDQFLADESAAISPSLIQAGTTNKLVAEFNFLRAQAVEPLAQFLDYITYEYMIDNVILLLKGTLNGRDVNELIQQLHPLGKFDESIMRSICAFEPNSKGYSDLYETVLIDTPIGTYFSQFLEESAGGDRMDGTSDVRNVLEEVQMELIKNSMLKLWLEDFYVFCQKVGGDTAVIMGEILQARADRVAINITLNSFGTPLNEPAMRISDRKPLYPSIGQLYPEATELLAEAGDEAALGAVLEAYPVYRKIWEVHQSEGVDNKSIDDAFYERDVQMSELAFQSQMHFGCFFAYVKLKEQEVRNLVWISECIVQKQRDAINNFIPIFSDSAPWRSTQK 390
[Close]
BLAST of Ec-27_005790.1 vs. uniprot
Match: H3H4A6_PHYRM (V-type proton ATPase subunit n=28 Tax=Oomycota TaxID=4762 RepID=H3H4A6_PHYRM)

HSP 1 Score: 517 bits (1332), Expect = 5.360e-181
Identity = 250/381 (65.62%), Postives = 307/381 (80.58%), Query Frame = 1 
Query:   34 GDFHIFNVHHGFPEGLVRGYRTGFLTDMDYNNLCQCESLEDVKLNLQETDYDQFLSQEN-KVTPAALQERATKKLVVEFNFLKAQAQEPLSTFLEYITYEYMIENIMMLLKGTLSGRDVNELIEQCHPMGLFKDSTMRLIPAFEASPKGYADLYQTVLVDTPIGPYFSQFLEQQQ--ERLTNAAQVRDILEEVEIEIIKNSLMKLYLEDFHRFCKSVGGDTSTVMCELLEARADRGAINITLNSFGGPLNEPSMRSTDRRRLYPAIGTLYPEATNLFQEVGDESQLAAVLDMYPVYRGIWAVHQNEAYGDKSIDDAFFERDVDMLELAFQGQMHFGPFYAYVKLKEQEIRNLVWISECIVQQQRDEIGKYIPLFSENASWK 1167
            GD   FN+ HG+ EGLVRG+R+GFL D+DY++L QCESLEDVKLNLQETDYDQFL+ E+  ++P  +Q   T KLV EFNFL+AQA EPL  FL++ITYEYMI+N+++LLKGTL+GRDVNELI Q HP+G F +S MR I  FE + KGY+DLY+TVL+DTPIG YFSQFLE+    +R+   + VR++LEEV++E+IKNS++KL+LEDF+ FC+ +GGDT+ +M E+LEARADR AINITLNSFG PLNEP+MR +DR  LYP+IGTLYP+AT +  E GDES L A LD +PVYR IW VHQ E    KSIDDAF+ERDV M ELAFQ QMHF  FYAYVKLKEQE+RNLVWI ECIVQ QRD I  +IP+FS++A W+
Sbjct:    6 GDISTFNIQHGYVEGLVRGFRSGFLDDVDYHHLTQCESLEDVKLNLQETDYDQFLADESGAISPGLIQAGTTNKLVEEFNFLRAQAMEPLGQFLDFITYEYMIDNVILLLKGTLNGRDVNELIGQLHPLGKFDESIMRSICTFEPNAKGYSDLYETVLIDTPIGTYFSQFLEESAGGDRMDGTSDVRNVLEEVQMELIKNSMLKLWLEDFYNFCQEIGGDTAVIMGEILEARADRIAINITLNSFGTPLNEPAMRISDRTPLYPSIGTLYPDATAILAEAGDESALGAALDPFPVYRKIWEVHQGEGVDSKSIDDAFYERDVQMAELAFQSQMHFACFYAYVKLKEQEVRNLVWICECIVQNQRDAINNFIPIFSDSAPWR 386
[Close]
BLAST of Ec-27_005790.1 vs. uniprot
Match: A0A7S2CIC4_9STRA (Hypothetical protein (Fragment) n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CIC4_9STRA)

HSP 1 Score: 515 bits (1326), Expect = 4.700e-180
Identity = 247/386 (63.99%), Postives = 309/386 (80.05%), Query Frame = 1 
Query:   34 GDFHIFNVHHGFPEGLVRGYRTGFLTDMDYNNLCQCESLEDVKLNLQETDYDQFLSQENKVTPAALQERATKKLVVEFNFLKAQAQEPLSTFLEYITYEYMIENIMMLLKGTLSGRDVNELIEQCHPMGLFKDSTMRLIPAFEASPKGYADLYQTVLVDTPIGPYFSQFLEQQQERLTNAAQVRDILEEVEIEIIKNSLMKLYLEDFHRFCKSVGGDTSTVMCELLEARADRGAINITLNSFGGPLNEPSMRSTD----RRRLYPAIGTLYPEATNLFQEVGDESQLAAVLDMYP-VYRGIWAVHQNEAYGDKSIDDAFFERDVDMLELAFQGQMHFGPFYAYVKLKEQEIRNLVWISECIVQQQRDEIGKYIPLFSENASWKVAR 1176
            G    FN+ HGF E LVRG R+GFL D DY++L QCE+LEDVK+NLQETDYDQFLS    VTP+ +Q++AT+K+V+EF +++A + EPLS+F+++I  EYMIEN+M+LLKGTLSGRDVNEL+EQCHP+G+FK+STMRL  AF+ SPKGY+DLYQTVLV+TP+G YFS+ L Q+   L NA +VR++LEEVEIEI+KNSLMKLYLEDF+ FC+ +GG+T+ +MCELL+A++D+ AINITLNSFG PLNEPSMR  D    R+ LYP+IG LYPE T L   V DE  L   ++    +Y  IW  H NEA  DKSIDDAFFER+V+MLELAF+ QMHF  FYAY KLKEQEIRNLVWISECIVQQQ++E+ K++P FS +A W+  R
Sbjct:   10 GGMTTFNMQHGFTEALVRGMRSGFLKDQDYHHLTQCENLEDVKMNLQETDYDQFLSDVTTVTPSIIQQKATEKMVIEFQYMRAHSVEPLSSFMDFIAIEYMIENVMLLLKGTLSGRDVNELMEQCHPLGMFKESTMRLCTAFDNSPKGYSDLYQTVLVETPVGKYFSEILAQKSAMLENAGEVRNVLEEVEIEILKNSLMKLYLEDFYYFCQEIGGETAPLMCELLKAKSDQRAINITLNSFGTPLNEPSMRDGDGWPTRKSLYPSIGFLYPEGTELLVNVSDEQTLGVAMEKIGGIYSSIWNTHVNEAISDKSIDDAFFEREVEMLELAFENQMHFACFYAYTKLKEQEIRNLVWISECIVQQQKEEVNKFVPCFSASAPWRNRR 395
[Close]
BLAST of Ec-27_005790.1 vs. uniprot
Match: A0A1E7FHA0_9STRA (V-type proton ATPase subunit n=3 Tax=Bacillariaceae TaxID=33852 RepID=A0A1E7FHA0_9STRA)

HSP 1 Score: 511 bits (1317), Expect = 7.960e-179
Identity = 240/377 (63.66%), Postives = 303/377 (80.37%), Query Frame = 1 
Query:   37 DFHIFNVHHGFPEGLVRGYRTGFLTDMDYNNLCQCESLEDVKLNLQETDYDQFLSQENKVTPAALQERATKKLVVEFNFLKAQAQEPLSTFLEYITYEYMIENIMMLLKGTLSGRDVNELIEQCHPMGLFKDSTMRLIPAFEASPKGYADLYQTVLVDTPIGPYFSQFLEQQQERLTNAAQVRDILEEVEIEIIKNSLMKLYLEDFHRFCKSVGGDTSTVMCELLEARADRGAINITLNSFGGPLNEPSMRSTDRRRLYPAIGTLYPEATNLFQEVGDESQLAAVLDMYPVYRGIWAVHQNEAYGDKSIDDAFFERDVDMLELAFQGQMHFGPFYAYVKLKEQEIRNLVWISECIVQQQRDEIGKYIPLFSENASWK 1167
            DF  FN+ HGFPE LVRG R+ FL D DYN+L QCE+L+DV+LNL ETDY   ++  N +TPA LQ+ A +KLV EF +L+ Q  +PLS F+++ITYEYMIENIM+LLKG LSGRD+NEL+EQCHP+G+FKDSTMR IP FE S KGY+DLY TVLVDTP+GPYFS+FL  Q+  +      R++LEEVEIEIIK+SL+K +LEDF+ FC S+GGDT  +MC++L+ RAD  AINITLNSFG PLNEP MR++DR+RLYPA+G LYPE T L  +V DE ++  VL+ +P Y  +W++H N + GDKSIDDAF+ERDV  LELAF+ Q HFG FYAYVKLKEQEIRNLVWI+ECI+QQQ+DEI K++ +FS+N++W+
Sbjct:   12 DFTTFNIRHGFPEALVRGMRSSFLADSDYNHLIQCETLDDVRLNLTETDYADSIADFNSITPAMLQKAAVEKLVTEFTYLRTQTVQPLSAFMDFITYEYMIENIMLLLKGALSGRDINELLEQCHPLGMFKDSTMRSIPTFENSAKGYSDLYTTVLVDTPVGPYFSKFL--QESSVHRGTSSRNVLEEVEIEIIKSSLIKFWLEDFYNFCYSMGGDTGEIMCDILKVRADTNAINITLNSFGTPLNEPGMRTSDRKRLYPAVGYLYPEGTMLLADVSDEEEMGRVLEAFPTYSALWSIHANGS-GDKSIDDAFYERDVHKLELAFENQFHFGCFYAYVKLKEQEIRNLVWITECILQQQKDEIDKFVLVFSQNSAWR 385
[Close]
BLAST of Ec-27_005790.1 vs. uniprot
Match: A0A067CNV3_SAPPC (V-type proton ATPase subunit n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CNV3_SAPPC)

HSP 1 Score: 509 bits (1312), Expect = 6.090e-178
Identity = 251/387 (64.86%), Postives = 306/387 (79.07%), Query Frame = 1 
Query:   19 VAEDPGDFHIFNVHHGFPEGLVRGYRTGFLTDMDYNNLCQCESLEDVKLNLQETDYDQFLSQENK--VTPAALQERATKKLVVEFNFLKAQAQEPLSTFLEYITYEYMIENIMMLLKGTLSGRDVNELIEQCHPMGLFKDSTMRLIPAFEASPKGYADLYQTVLVDTPIGPYFSQFLEQQQE-RLTNAAQVRDILEEVEIEIIKNSLMKLYLEDFHRFCKSVGGDTSTVMCELLEARADRGAINITLNSFGGPLNEPSMRSTDRRRLYPAIGTLYPEATNLFQEVGDESQLAAVLDMYPVYRGIWAVHQNEAYGDKSIDDAFFERDVDMLELAFQGQMHFGPFYAYVKLKEQEIRNLVWISECIVQQQRDEIGKYIPLFSENASWKV 1170
            + +  GD   FN+ HGF EGL+RGYR+GFL D+DY++L QCE+LED+KLNLQETDYDQFL Q+N   VTP+ +Q   TKK V EF FL+AQA EPL  FL++ITYEYMI+N+M+LLKGT++GRDVNELI Q HP+G F DS MR I  FEA+ KGYADLY+ VL+DTPIG YF QFL++  E RL  A++VR+ILEEV++EIIKNSL+KL+LEDFH FC ++GG+T+ +M  +L ARADR AINITLNSFG PLNEPS+R +DR+ LYP+IG LYP  T    EV DE  L  VLD +PVYR IW +HQ+E   +KSIDDAF+ERDV M ELAF  QMHF  FYAYVKLKEQE+RNLVWI ECI+Q QRD I  +IP+FSENA W++
Sbjct:    1 MVQSTGDITTFNIQHGFVEGLIRGYRSGFLDDVDYHHLTQCETLEDIKLNLQETDYDQFL-QDNSGTVTPSIIQTATTKKFVDEFVFLRAQAMEPLGEFLDFITYEYMIDNLMLLLKGTMNGRDVNELIGQLHPLGKFDDSIMRSICTFEANSKGYADLYECVLIDTPIGKYFQQFLQENAEDRLGEASEVRNILEEVQMEIIKNSLLKLWLEDFHEFCMNLGGETAVMMGVILRARADRIAINITLNSFGTPLNEPSLRISDRKPLYPSIGELYPAGTEALSEVSDEGSLGIVLDPFPVYRKIWEIHQSEGVDNKSIDDAFYERDVMMCELAFGSQMHFACFYAYVKLKEQEVRNLVWICECIIQNQRDAIHNFIPIFSENAPWRL 386
[Close]
BLAST of Ec-27_005790.1 vs. uniprot
Match: A0A024UPC9_9STRA (V-type proton ATPase subunit n=7 Tax=Aphanomyces TaxID=100860 RepID=A0A024UPC9_9STRA)

HSP 1 Score: 509 bits (1311), Expect = 8.950e-178
Identity = 249/390 (63.85%), Postives = 306/390 (78.46%), Query Frame = 1 
Query:   19 VAEDPGDFHIFNVHHGFPEGLVRGYRTGFLTDMDYNNLCQCESLEDVKLNLQETDYDQFLSQ-ENKVTPAALQERATKKLVVEFNFLKAQAQEPLSTFLEYITYEYMIENIMMLLKGTLSGRDVNELIEQCHPMGLFKDSTMRLIPAFEASPKGYADLYQTVLVDTPIGPYFSQFLEQQ--QERLTNAAQVRDILEEVEIEIIKNSLMKLYLEDFHRFCKSVGGDTSTVMCELLEARADRGAINITLNSFGGPLNEPSMRSTDRRRLYPAIGTLYPEATNLFQEVGDESQLAAVLDMYPVYRGIWAVHQNEAYGDKSIDDAFFERDVDMLELAFQGQMHFGPFYAYVKLKEQEIRNLVWISECIVQQQRDEIGKYIPLFSENASWKVARR 1179
            + +  GD   FN+ HGF E LVRGYR+GFL D+DY++L QCE+LED+KLNLQETDYDQFL      VTP  +Q   TKK V EF FL++QA EPL  F+++ITYEYMIEN+M+LLKGT++GRDVNELI Q HP+G F+DS MR I  FE S KGYADLY+ VL+DTPIG YF QFL +   + RL  A+QVR+ILEEV++EIIKNS++KL+LEDF+ FC+ VG +T+ +M  +L ARADR AINITLNSFG PLNEPS+R +DR++LYP+IG LYP  T    EVGDE+ L  VL+ + +YR IW +HQ+E   +KSIDDAF+ERDV M ELAFQ QMHFG FYA+VKLKEQE+RNLVWISECIVQ QRD I  +IP+FSENA W+VA +
Sbjct:    1 MVQSAGDLSAFNIQHGFVEALVRGYRSGFLDDVDYHHLTQCETLEDIKLNLQETDYDQFLQDVSGAVTPTVIQAATTKKFVDEFVFLRSQAMEPLGEFMDFITYEYMIENLMLLLKGTINGRDVNELIAQLHPLGKFEDSIMRSICTFENSSKGYADLYECVLIDTPIGKYFQQFLAENAAENRLGEASQVRNILEEVQMEIIKNSMLKLWLEDFYTFCQEVGSETAVIMGIILRARADRIAINITLNSFGTPLNEPSLRISDRKQLYPSIGELYPAGTEALSEVGDEASLGLVLEPHQIYRKIWEIHQSEGVDNKSIDDAFYERDVMMCELAFQSQMHFGCFYAFVKLKEQEVRNLVWISECIVQNQRDAIQNFIPIFSENAPWRVAAK 390
The following BLAST results are available for this feature:
BLAST of Ec-27_005790.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LAZ9_ECTSI3.560e-293100.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CAY8_9STRA7.020e-22175.13V0 complex, c/d subunit of ATPase n=1 Tax=Tribonem... [more]
F0XZC2_AURAN1.070e-19670.74V-type proton ATPase subunit n=1 Tax=Aureococcus a... [more]
A0A7S3ZVT8_9STRA4.750e-18667.91V-type proton ATPase subunit n=1 Tax=Pelagomonas c... [more]
A0A5D6XZX1_9STRA1.560e-18265.71V-type proton ATPase subunit n=1 Tax=Pythium brass... [more]
H3H4A6_PHYRM5.360e-18165.62V-type proton ATPase subunit n=28 Tax=Oomycota Tax... [more]
A0A7S2CIC4_9STRA4.700e-18063.99Hypothetical protein (Fragment) n=2 Tax=Florenciel... [more]
A0A1E7FHA0_9STRA7.960e-17963.66V-type proton ATPase subunit n=3 Tax=Bacillariacea... [more]
A0A067CNV3_SAPPC6.090e-17864.86V-type proton ATPase subunit n=3 Tax=Saprolegniace... [more]
A0A024UPC9_9STRA8.950e-17863.85V-type proton ATPase subunit n=7 Tax=Aphanomyces T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_27contigchr_27:5370400..5377386 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score803.5
Seed ortholog evalue4.4e-230
Seed eggNOG ortholog2880.D8LAZ9
Preferred nameATP6V0D2
Length1191
KEGG koko:K02146,ko:K18164
KEGG TC3.A.2.2
KEGG Pathwayko00190,ko01100,ko04142,ko04145,ko04714,ko04721,ko04966,ko05110,ko05120,ko05152,ko05203,ko05323,map00190,map01100,map04142,map04145,map04714,map04721,map04966,map05110,map05120,map05152,map05203,map05323
KEGG ModuleM00160
Hectar predicted targeting categoryother localisation
Gene idEc-27_005790.1
GOsGO:0000041,GO:0000220,GO:0000322,GO:0000323,GO:0000324,GO:0000325,GO:0000329,GO:0000331,GO:0001654,GO:0001655,GO:0001763,GO:0001822,GO:0001947,GO:0002009,GO:0003002,GO:0003007,GO:0003143,GO:0003406,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005765,GO:0005768,GO:0005769,GO:0005773,GO:0005774,GO:0005794,GO:0005886,GO:0005911,GO:0006810,GO:0006811,GO:0006812,GO:0006826,GO:0006873,GO:0006875,GO:0006879,GO:0006885,GO:0006950,GO:0006986,GO:0006996,GO:0007034,GO:0007035,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007275,GO:0007368,GO:0007389,GO:0007399,GO:0007423,GO:0007424,GO:0007430,GO:0007507,GO:0008021,GO:0008057,GO:0008104,GO:0008150,GO:0008286,GO:0008324,GO:0008544,GO:0008553,GO:0008593,GO:0009506,GO:0009628,GO:0009653,GO:0009719,GO:0009725,GO:0009790,GO:0009798,GO:0009799,GO:0009855,GO:0009887,GO:0009888,GO:0009894,GO:0009913,GO:0009966,GO:0009987,GO:0010008,GO:0010033,GO:0010035,GO:0010038,GO:0010243,GO:0010506,GO:0010646,GO:0012505,GO:0012506,GO:0015031,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0015672,GO:0015682,GO:0015833,GO:0015988,GO:0015991,GO:0016020,GO:0016021,GO:0016043,GO:0016050,GO:0016241,GO:0016324,GO:0016462,GO:0016469,GO:0016471,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019222,GO:0019725,GO:0019829,GO:0022008,GO:0022607,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0023051,GO:0023052,GO:0030001,GO:0030003,GO:0030004,GO:0030030,GO:0030031,GO:0030054,GO:0030133,GO:0030139,GO:0030154,GO:0030182,GO:0030424,GO:0030641,GO:0030659,GO:0030666,GO:0030670,GO:0030855,GO:0030968,GO:0031090,GO:0031164,GO:0031224,GO:0031323,GO:0031329,GO:0031410,GO:0031982,GO:0032009,GO:0032438,GO:0032501,GO:0032502,GO:0032868,GO:0032869,GO:0032870,GO:0032991,GO:0033036,GO:0033059,GO:0033176,GO:0033177,GO:0033179,GO:0033181,GO:0033267,GO:0033554,GO:0033572,GO:0034220,GO:0034620,GO:0034976,GO:0035050,GO:0035239,GO:0035295,GO:0035315,GO:0035675,GO:0035966,GO:0035967,GO:0036295,GO:0036296,GO:0036442,GO:0036498,GO:0039022,GO:0042221,GO:0042490,GO:0042592,GO:0042623,GO:0042625,GO:0042626,GO:0042886,GO:0042995,GO:0043005,GO:0043010,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043434,GO:0043473,GO:0043492,GO:0043679,GO:0044085,GO:0044306,GO:0044422,GO:0044424,GO:0044425,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0044769,GO:0044782,GO:0044877,GO:0045177,GO:0045184,GO:0045202,GO:0045335,GO:0045851,GO:0046688,GO:0046916,GO:0046961,GO:0048468,GO:0048513,GO:0048562,GO:0048568,GO:0048583,GO:0048598,GO:0048666,GO:0048699,GO:0048729,GO:0048731,GO:0048753,GO:0048754,GO:0048793,GO:0048856,GO:0048869,GO:0048878,GO:0048880,GO:0048882,GO:0048884,GO:0048886,GO:0048925,GO:0050789,GO:0050794,GO:0050801,GO:0050896,GO:0051179,GO:0051234,GO:0051452,GO:0051453,GO:0051716,GO:0055044,GO:0055065,GO:0055067,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0055085,GO:0060041,GO:0060271,GO:0060429,GO:0060446,GO:0060541,GO:0060562,GO:0060972,GO:0061138,GO:0061371,GO:0065007,GO:0065008,GO:0070382,GO:0070482,GO:0070887,GO:0070925,GO:0070986,GO:0071310,GO:0071375,GO:0071417,GO:0071453,GO:0071495,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0072001,GO:0072073,GO:0072176,GO:0072359,GO:0072512,GO:0090662,GO:0097458,GO:0097708,GO:0098588,GO:0098590,GO:0098655,GO:0098660,GO:0098662,GO:0098771,GO:0098793,GO:0098796,GO:0098797,GO:0098805,GO:0098852,GO:0099131,GO:0099132,GO:0099503,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:0150034,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902600
EggNOG free text desc.proton-exporting ATPase activity, phosphorylative mechanism
EggNOG OGsCOG1527@1,KOG2957@2759
COG Functional cat.C
BiGG ReactioniMM904.YLR447C,iND750.YLR447C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03029
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-27_005790Ec-27_005790Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_27 5370400..5377386 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_005790.1Ec-27_005790.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_27 5370400..5377386 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_005790.1.10Ec-27_005790.1.10Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5370400..5370525 -
Ec-27_005790.1.9Ec-27_005790.1.9Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5371012..5371119 -
Ec-27_005790.1.8Ec-27_005790.1.8Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5371605..5371703 -
Ec-27_005790.1.7Ec-27_005790.1.7Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5371970..5372116 -
Ec-27_005790.1.6Ec-27_005790.1.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5372365..5372439 -
Ec-27_005790.1.5Ec-27_005790.1.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5372828..5372884 -
Ec-27_005790.1.4Ec-27_005790.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5373561..5373722 -
Ec-27_005790.1.3Ec-27_005790.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5374308..5374469 -
Ec-27_005790.1.2Ec-27_005790.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5375125..5375262 -
Ec-27_005790.1.1Ec-27_005790.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5377270..5377386 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_005790.1CDS:Ec-27_005790.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_27 5370400..5370525 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-27_005790.1 ID=Ec-27_005790.1|Name=Ec-27_005790.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=397bp
MPGPFSVAEDPGDFHIFNVHHGFPEGLVRGYRTGFLTDMDYNNLCQCESL
EDVKLNLQETDYDQFLSQENKVTPAALQERATKKLVVEFNFLKAQAQEPL
STFLEYITYEYMIENIMMLLKGTLSGRDVNELIEQCHPMGLFKDSTMRLI
PAFEASPKGYADLYQTVLVDTPIGPYFSQFLEQQQERLTNAAQVRDILEE
VEIEIIKNSLMKLYLEDFHRFCKSVGGDTSTVMCELLEARADRGAINITL
NSFGGPLNEPSMRSTDRRRLYPAIGTLYPEATNLFQEVGDESQLAAVLDM
YPVYRGIWAVHQNEAYGDKSIDDAFFERDVDMLELAFQGQMHFGPFYAYV
KLKEQEIRNLVWISECIVQQQRDEIGKYIPLFSENASWKVARRAGR*
back to top

spliced messenger RNA

>Ec-27_005790.1 ID=Ec-27_005790.1|Name=Ec-27_005790.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1191bp|location=Sequence derived from alignment at chr_27:5370400..5377386- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGCCGGGCCCTTTTTCTGTCGCTGAGGACCCAGGAGACTTCCACATCTT
CAACGTCCACCATGGCTTTCCGGAAGGGCTTGTGAGGGGTTACAGGACCG
GGTTCCTTACGGACATGGACTACAACAACCTGTGCCAGTGCGAGTCCCTC
GAGGACGTGAAGCTTAACCTGCAAGAGACGGACTACGACCAGTTCCTCTC
CCAAGAGAACAAGGTCACCCCGGCCGCGTTGCAAGAGAGGGCCACCAAGA
AGCTGGTAGTGGAGTTCAACTTCCTCAAGGCGCAGGCGCAGGAACCGCTG
TCGACCTTCCTAGAGTACATCACGTACGAGTACATGATCGAGAACATCAT
GATGCTATTGAAGGGCACCCTGTCGGGCAGGGACGTTAACGAGCTCATCG
AACAGTGCCACCCGATGGGTCTGTTCAAGGACTCGACGATGCGGCTTATC
CCGGCGTTCGAAGCTTCGCCGAAGGGGTACGCCGACCTTTACCAGACCGT
TCTCGTCGACACGCCCATCGGCCCGTACTTCAGCCAGTTCCTGGAGCAGC
AGCAGGAGAGGCTTACCAACGCGGCCCAGGTCCGGGACATTCTTGAAGAG
GTGGAAATCGAGATCATCAAGAACTCGCTGATGAAGTTGTACCTGGAGGA
CTTCCACCGCTTCTGCAAGAGCGTTGGCGGAGACACGTCGACGGTCATGT
GCGAGCTGCTGGAGGCTCGCGCCGACCGGGGCGCCATCAACATCACCCTC
AACTCTTTCGGGGGACCGCTGAACGAGCCGTCCATGCGCTCCACGGACCG
CCGTCGGCTGTACCCGGCTATCGGCACGCTATACCCGGAGGCGACGAACT
TGTTCCAGGAAGTTGGCGACGAGTCCCAGCTAGCGGCCGTTCTGGACATG
TACCCCGTGTACAGGGGCATCTGGGCCGTTCACCAGAACGAGGCGTACGG
GGACAAGTCGATCGACGATGCGTTCTTTGAGAGGGACGTGGATATGCTGG
AGCTAGCGTTTCAGGGGCAGATGCACTTCGGACCCTTCTACGCCTACGTC
AAGCTGAAGGAGCAGGAAATTCGCAACTTGGTATGGATATCGGAGTGCAT
CGTCCAGCAGCAGAGGGACGAGATCGGCAAGTACATCCCCCTGTTCAGCG
AGAACGCCTCGTGGAAGGTTGCTCGCCGCGCCGGGAGATAA
back to top

protein sequence of Ec-27_005790.1

>Ec-27_005790.1 ID=Ec-27_005790.1|Name=Ec-27_005790.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=397bp
MPGPFSVAEDPGDFHIFNVHHGFPEGLVRGYRTGFLTDMDYNNLCQCESL
EDVKLNLQETDYDQFLSQENKVTPAALQERATKKLVVEFNFLKAQAQEPL
STFLEYITYEYMIENIMMLLKGTLSGRDVNELIEQCHPMGLFKDSTMRLI
PAFEASPKGYADLYQTVLVDTPIGPYFSQFLEQQQERLTNAAQVRDILEE
VEIEIIKNSLMKLYLEDFHRFCKSVGGDTSTVMCELLEARADRGAINITL
NSFGGPLNEPSMRSTDRRRLYPAIGTLYPEATNLFQEVGDESQLAAVLDM
YPVYRGIWAVHQNEAYGDKSIDDAFFERDVDMLELAFQGQMHFGPFYAYV
KLKEQEIRNLVWISECIVQQQRDEIGKYIPLFSENASWKVARRAGR*
back to top

mRNA from alignment at chr_27:5370400..5377386-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-27_005790.1 ID=Ec-27_005790.1|Name=Ec-27_005790.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=6987bp|location=Sequence derived from alignment at chr_27:5370400..5377386- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGCCGGGCCCTTTTTCTGTCGCTGAGGACCCAGGAGACTTCCACATCTT
CAACGTCCACCATGGCTTTCCGGAAGGGCTTGTGAGGGGTTACAGGACCG
GGTTCCTTACGGACATGGTGAGTCAGAGTCGGTTGCTGCTTGTGCAAACC
TTTTCGCTGCGGGGCCCGGTAGACTTGCTGCATCTCCACGTTGTCGTCAG
CCGAGCATCATCGATTATACACGCACTCACACCCTCGCTGCTCCGTCGGG
GTAGTTCGGTAACTTGTGAGGGCTGACCGGGCGCAAGAGAGCGGGTCATG
TTGGATTGTTGCAGAGCATCCAGTGCCCCTTGTGTATGGTGTTGTTCGTA
CAAACAGTGCTTGTTGCTGCGCGGTTCCGTAGCATGCACTTTTCCGTATT
TCGAGCTTCGCGCATAAGAGTCTACCTGCTGAGTACCAGTGACTGTGGAC
TGACCGTGCTGGCTCGTATATGTAGTGCGCGAGGACGTTTCGGAGCCTGC
ATTGTGTGCATGTTTTTTTTCGATCTAGCTGGTACAAGTTGTGCTGATGT
ATCGCGGTATGGTGTGCGGCAAGATGACTATTAATAGTTGCTCCAGGATA
TACTTGTGTTTGGACACGGCAGAGTTCCCTCAAAATATAGTGCCCGACAG
GAGCGCCACGCCCCCTCCACGCGCAAGTAGTTCGAGGTCGAACCCATTAC
CGTATATGACACAAGATAACACACCCCCTGGACCGATTTTCAAACCTCGA
TTACTCCACGACGAAGAGGATGCATAAATGAAACAATACGTTTTCGAACA
GCTCTCGACGAGACGGTTCCAACGCCGCCGTTTTCGGCGCTGTGACTCTT
CCTGCTGTTGAGAAATCGAGCTTTGAAAATCGGCCAAGGGGGTGTGTTAT
CTTGTGTCATATACGGTACACAACGACTGCTACTGCTGTAGCGGCAAAGG
AGGAGCTGCTGTGGTGCAGCGTGAATGCGTGTGTGTTTCTCGTATGTTGA
CTTCCTGTAGATCGTGTGTTGATTCCCATGTCGAAGGGGCGGTGAGACAT
CGACTCCCGGTGGGTGTTCTTGCAATGTTGCTGTGCGCTGATTGTCCAAC
CAGTACGCTCGCTGATGATAAGAGTACTTCCTGCTCTCCGGCTACCGCCT
CCTGTTTCGCCGGTTGTGATAGACTTTACACCACTATCTTTGCTGCACAT
GAAACACAATGCAACGTTCAACATGCACACCTTCACTATTATAGTGAGAG
ACGAGAGGGGGGTTGAAGAAAGTGCCGACTGTTATCGCAGACGTCATTTT
ACCATCAAACGTAGAGGCGAGCTCCACGGCTCGCACACCAAGGCAAGGGT
GCAACCGAGAGTCCACCGGTGGAACATAAGCGAAACCTGCAACTCCGCCT
AGCACGGCCCAAACGCGCTGCGCATATGTCCAGTCTTAATCCTTTGGTCG
GGGTTGGCGCTCACCTCGATCGGGACACCCCGTTCCTTTCACCCTCCGCT
TGATTCCGTTGCTGTTGGCCGGCTTATCATGGCAAGTCTTTTTTTTTGTG
GCGTACACGTAGCGCCCGCACTCAAGAACCTGGCGGCTAAGAACTCCATG
CCCAACATTTTGTCAAACATCAGAGCCTGAGCACCATTATTTATGAACTT
TACCCTTAGAAACTATATAGGGACGATTTGTAGCACACAAGAGGAGCTAT
TATATGAACCCCAGCCTCTGCCAAAACTGGAGGTTCTGGAGTGAGGGCGC
TATCTATGGTCTACCAATCACTTGCCAAGCTCGCACGAAGTTCTCGGCCG
ACTGCTAGTAGTTTTTTAACTGTGCCCTGTTGTTGCCTGTGCTTGTCGAG
GTAGGTTCGATTTCGAGATTTTGCGGTCTGGTTTGTCGTGAAAGTGGCGA
GGATTGCACGGTTCATCATGCGCGCAAAGGCCGTAATATATGTAGGAACA
CAACAATAACAACATCATCATCACGCAGGGGTTCATGACTGCTGGCAATT
GAAACGGCGTAGATAAGGGTTCCAAACTACACATGTACGTACACAACGGT
TACAGGCCCCCGACTCCCCCCCCGCCAACCTCCACCTACCTCTCTCGCCC
TCGCTTGCTGTCCCTCGCTGCCAGGACTACAACAACCTGTGCCAGTGCGA
GTCCCTCGAGGACGTGAAGCTTAACCTGCAAGAGACGGACTACGACCAGT
TCCTCTCCCAAGAGAACAAGGTCACCCCGGCCGCGTTGCAAGAGAGGGCC
ACCAAGAAGCTGGTGGGTGTTGGGCGGTAGCCGGAATGACCCTTGCCTTT
TGTTCGTTGGCGTTGGCGTAGTATTCGTGGTGGCTGTGAGGGTGACCCTG
TTGGTGTTGGTGCTATCATTGCCGTTACTGCTGTTGCTTGTGTTGCAGCT
GATGGGCCTTTGGGCTCTCTCCCGGAAAGGAATCGCCGCGGTGTCTATGC
GTACATCGTCAGCACTCCTTCCCGTATAGAGAGACGCTGCTTGGCTGCGT
TTTGGGATGATGCTGCCGCCAGGACCCGGCCGCCGCTGCTGTAGTTCGGG
CCCTCTTTGAGAGTGGAATATCGACTTTCCCCGCCGAGATGTGACTGCCG
CGCGTGTTGTCCCCTCGTCCTCCTGTGACTTCCGTGGTCTTGTCCTGCCT
GTGCCGCTGAACTGTTTAGTTAATCCGGAGGCATCCGCCAACACCGCGCT
GTTTTCTGTGTTAAACCGAGCACAACGTGTCTACTGCTGTTGGTGGCCAT
CCGGTTTGTCTGTGTCAAGCGTCTTTCTCGCCTACGCCCAAGACATGCAT
GGACATGCGTCCACGTCCAAACGCGGAGGTTGCCCGTAGGAGCATACTGA
GTTTTATTGAAAACAACATCAACCGCAACAACAACAACGATGACCGCGAT
GGTACTTGCGCGTGCAGGTAGTGGAGTTCAACTTCCTCAAGGCGCAGGCG
CAGGAACCGCTGTCGACCTTCCTAGAGTACATCACGTACGAGTACATGAT
CGAGAACATCATGATGCTATTGAAGGGCACCCTGTCGGGCAGGGACGTTA
ACGAGCTCATCGAACAGTGCCACCCGATGGTGAGGAGAAACCTTTTTTTT
TTGCTGGTGGCTACAGCGGTAGATGCACATGCTCTTGTGGACTGTCAGTC
AAGCTATGCTTGTGTGTCGGAGTGCGTCAGACAGACGTGTCGTTGCTGTC
ATCGCTCGTCGTGCTATGTGTCCCGCGCCTTGATTAACTCCATTGAGAGC
TAAACGGAAAAATTAAGTCCCGCCAACCGGCGTACCGTCCCACTATGGGA
GGGACACACTGGGAGAACATTGCAAAAGTCGTGGCGCGTGCCGACTCGTC
TCGTGTAGTGTGGGGTAAAGCAAACGTTTTCGCGAGCGCGCTCGCTCTCC
TTGAAATCAACCGCTTGTCGAATCGGTCGCACTCAGATATGTACATTATG
AGGGACCCACGCTCCGGTAAAGCACCAGCAAACTAGCTGACCAAGGTTAC
AAAATGGAACATCCCACCCATCTCGTCTACAATAACCCGTCTCTGGTTTC
GGAAAATCGCCTTGAAAACAGGTAGGTAACCAGAACGTACTTGCCGGTAC
AGACAGGGGTGGCTGACGCGCTAGCTCTTTACCGTTTCCGCTGCTGTGTT
TTCGCGCACGATAGGGTCTGTTCAAGGACTCGACGATGCGGCTTATCCCG
GCGTTCGAAGCTTCGCCGAAGGGGTACGCCGACCTTTACCAGACCGTTCT
CGTCGACACGCCCATCGGCCCGTACTTCAGCCAGTTCCTGGAGCAGCAGC
AGGAGAGGCTTACCAACGCGGCCCAGGTGGGACACGCAATCTGCACGTAG
TACCCCCCAAAGAAAAAGAGAAGAATTAGTAGCCCCCCGCGTCCTCTCGA
GGACGCGTGGTCAATGGTCTAACCGCTAGCATGCAAAAACACAAGAGTAC
GCCCCCCCCCCCGCCCCCCGCACGCGTAGGGTCGCGGGGTCTCCTTCGGG
GGAAATCTCTTCATCAATAGATGGCACCGGGCAACACAGGCAGTCGTTGT
TTATGGTGTTGGTGTTGTTGTGGAAGCACTTCCCTTCAACGGGCTTTGGT
GGCGAGAAAGGACTCGGCTGCCGAGCAAGTGGAGGCTGTCACGACTGTGG
GCAAAAACAAATAGTGTGTGTGTTCGTGTTTGTGTATGTAGCACGTCGGC
TCCTTTTGACGACGGCAAGAATTCGCGTATGCATGCGTAGAGACACATTT
GCTGTAGACATGGTTCCTTCCACCCGAAAGAAGAGATGATTTAGATATTT
TACATTAATTTGGTTCAGCCCCTTTCCGTACGAGGGTCAAAACCGCTACT
GTAGGTAACGTTTGGAAGGAATCTATCGACCTTGGGTCGTGTGATGACGC
GCTTGGCCTACCTGAGAAACGTTCGCCCAACCTTCCATCCCTCTCCTGGG
CCCGTCAAACCGACTTCTCGCGGCCGGCGTCATTTGTGTGCAATACTGTT
AGGTCCGGGACATTCTTGAAGAGGTGGAAATCGAGATCATCAAGAACTCG
CTGATGAAGGTGAGATGGGAGCGGCCACTTGGACTGCGTGCTGAAGGAAA
AATAATGAATGAATGAAGTTGTCTGCCTGTGTTTTGATCAAGTTCCTTCC
TTGGCAATGGGAAAAACGATTTAGTGCAGCCCCGGTCTCGGTGTCCCGTC
CGGCTGCGATCAACAACAGCCGCGGCGGCGGCGGCGGCGGCAACAACAGC
AACAGCAGCAACAACATGAACCTGGATGACGGATGCGCAACGAAGTTGTA
CTCGACCACTGCAACGAACTAGATAGTACTCCACGCCGTTCCCCTCGAAT
TTTAAACATTATCTCGCTGACGGGCGAAAAATCTTGTGTGTCCGCGCGTC
TCTCTTTCTCTTCGTTCTCCCTTCACTTGTGTCCTCGTTGATTGCAGTTG
TACCTGGAGGACTTCCACCGCTTCTGCAAGAGCGTTGGCGGAGACACGTC
GACGGTCATGTGCGAGCTGCTGGTGAGAAAGCCATACTCTCTCCATCTAA
CCTGTTGGAATGCATGGACCACGTTATTTATTTTATTTTTTTCGTTACTT
CAAGGTGGGCACGAGACGCACCCCGGCCTTGCCTGTAAACTGTTGCAAGA
CATTGCGGTCGTGTTGGAGGTAAATATCGGTCTTGCAACTAAATACCCCC
AGAGCCCGGACTACACACAGGCCTCACTTCGACCTATTTTTTTTCTGCGT
CTGTGTTGGAAACCCGGCAGGAGGCTCGCGCCGACCGGGGCGCCATCAAC
ATCACCCTCAACTCTTTCGGGGGACCGCTGAACGAGCCGTCCATGCGCTC
CACGGACCGCCGTCGGCTGTACCCGGCTATCGGCACGCTATACCCGGAGG
CGACGAACTTGTTCCAGGTTAGTTGACGGCACAGATACCGCAGCAGCAGC
GTTGCGGTAAGATCTTGAATTGCAGCATAATCTTGAGGAGCTTGAAACAG
GCTCGAATACAGGTTCAGCAGGTGTCACTCAATCCCCACTCTAAAGGTTT
GAGAACAACTGAGCATTCACCGCTTCTCCCTCCGTTTCCTATCCATTCTG
CCTAGATAGTAGTTCCACCCCCCCCCCCTCTCCTGACTCCTCTTCTTTTT
TTATTTACTTTTCTGGTTCTCCCCCGCTGGCAGGAAGTTGGCGACGAGTC
CCAGCTAGCGGCCGTTCTGGACATGTACCCCGTGTACAGGGGCATCTGGG
CCGTTCACCAGAACGAGGCGTACGGGGACAAGGTGAGGTATCACAGGTAT
CACAGCAGTATTGTACCCTCCTCAGCCACTCGTGTCTAAGTTGAAACTCG
AACAAAAGGGGCTCACTTTGTGTGCCACGAAGAAAAACATGGGCGGGCTG
CTTGCTGCTCTCTTAGGGGTTGATTCGCGTTGCTCAATTTTGTGCGGTGT
TTTTGCTCTGTTACTACTTGCCAGTATTGCTTTTGTTCTGTAGCAACACT
GAGAGTTGAAGCAACACACTTTCCCTGTTGTGCCACGAAAAGCATCTGTA
CCCGCCTCTATCACCCGTGCCTGCGACCTAAAACTTGGAACAACACGCTC
CCATGTTTGTGCGTGGCAGAAAAGACCGGTAACGGCCTAGGCCACTGGTG
CCTGACTTGAAACTTGAAGTGACAACACTCCCTCTGTTGCAGCACAACAC
CCCGCGTCGGCTCCATTTCAATCCGTGCCCGCTTGTTTGTCAACCCCTCC
CGTTTTGGTGTTCACAGTCGATCGACGATGCGTTCTTTGAGAGGGACGTG
GATATGCTGGAGCTAGCGTTTCAGGGGCAGATGCACTTCGGACCCTTCTA
CGCCTACGTCAAGCTGAAGGAGCAGGTGAGAATAATAATTTTTAACTCTG
TCGGAATGATAACCGAATGAAGTACACAGTTCAGACACGAGGGCTGCCTT
TGGAGCGGAGATGCCGGTAGATGCGGTTTCAACAGAGAGCGCGTTGAATG
TACACTCCACTCTCTTTCGGTATTCAGCTGACAAGGTTCTCTCGTTGGTC
GTAAAGTGCCAAGTGTGTCGAGACTGTTCTGGGGATGGAGGCGAACAGGT
GGGTACATCCACGTACCTGTGTATATGTGTACACAAGTCCGGATACACGC
GGCGACAGTGGCAGAGTTTGCCTCGTATCGGTTTGTTCGGACCCACAGAG
AGGTGTATGGGTCACCCCTCGAAGGCGGTTGTCGCTACAAATATTTGTCC
TCTGCGGTGAAAGAAAGAACAACAAAATAATGCTTGCATTGCCTACCCCA
ACTTACGTTCTGCTTGCCCTCCCACCTCGACTCCCTCTCACGCTTCCCTT
CTCCTGTATAGGAAATTCGCAACTTGGTATGGATATCGGAGTGCATCGTC
CAGCAGCAGAGGGACGAGATCGGCAAGTACATCCCCCTGTTCAGCGAGAA
CGCCTCGTGGAAGGTTGCTCGCCGCGCCGGGAGATAA
back to top

Coding sequence (CDS) from alignment at chr_27:5370400..5377386-

>Ec-27_005790.1 ID=Ec-27_005790.1|Name=Ec-27_005790.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1191bp|location=Sequence derived from alignment at chr_27:5370400..5377386- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGCCGGGCCCTTTTTCTGTCGCTGAGGACCCAGGAGACTTCCACATCTT
CAACGTCCACCATGGCTTTCCGGAAGGGCTTGTGAGGGGTTACAGGACCG
GGTTCCTTACGGACATGGACTACAACAACCTGTGCCAGTGCGAGTCCCTC
GAGGACGTGAAGCTTAACCTGCAAGAGACGGACTACGACCAGTTCCTCTC
CCAAGAGAACAAGGTCACCCCGGCCGCGTTGCAAGAGAGGGCCACCAAGA
AGCTGGTAGTGGAGTTCAACTTCCTCAAGGCGCAGGCGCAGGAACCGCTG
TCGACCTTCCTAGAGTACATCACGTACGAGTACATGATCGAGAACATCAT
GATGCTATTGAAGGGCACCCTGTCGGGCAGGGACGTTAACGAGCTCATCG
AACAGTGCCACCCGATGGGTCTGTTCAAGGACTCGACGATGCGGCTTATC
CCGGCGTTCGAAGCTTCGCCGAAGGGGTACGCCGACCTTTACCAGACCGT
TCTCGTCGACACGCCCATCGGCCCGTACTTCAGCCAGTTCCTGGAGCAGC
AGCAGGAGAGGCTTACCAACGCGGCCCAGGTCCGGGACATTCTTGAAGAG
GTGGAAATCGAGATCATCAAGAACTCGCTGATGAAGTTGTACCTGGAGGA
CTTCCACCGCTTCTGCAAGAGCGTTGGCGGAGACACGTCGACGGTCATGT
GCGAGCTGCTGGAGGCTCGCGCCGACCGGGGCGCCATCAACATCACCCTC
AACTCTTTCGGGGGACCGCTGAACGAGCCGTCCATGCGCTCCACGGACCG
CCGTCGGCTGTACCCGGCTATCGGCACGCTATACCCGGAGGCGACGAACT
TGTTCCAGGAAGTTGGCGACGAGTCCCAGCTAGCGGCCGTTCTGGACATG
TACCCCGTGTACAGGGGCATCTGGGCCGTTCACCAGAACGAGGCGTACGG
GGACAAGTCGATCGACGATGCGTTCTTTGAGAGGGACGTGGATATGCTGG
AGCTAGCGTTTCAGGGGCAGATGCACTTCGGACCCTTCTACGCCTACGTC
AAGCTGAAGGAGCAGGAAATTCGCAACTTGGTATGGATATCGGAGTGCAT
CGTCCAGCAGCAGAGGGACGAGATCGGCAAGTACATCCCCCTGTTCAGCG
AGAACGCCTCGTGGAAGGTTGCTCGCCGCGCCGGGAGATAA
back to top
Synonyms
The feature 'Ec-27_005790.1' has the following synonyms
Synonym
Esi0000_0121
Esi_0000_0121