Ec-27_005660.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-27_005660.1
Unique NameEc-27_005660.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length259
Homology
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BLAST of Ec-27_005660.1 vs. uniprot
Match: A0A6H5JTA2_9PHAE (Thioredoxin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JTA2_9PHAE)

HSP 1 Score: 437 bits (1125), Expect = 7.850e-154
Identity = 231/260 (88.85%), Postives = 234/260 (90.00%), Query Frame = 1 
Query:    1 MKVIGRKSMRCVMAALGLLVLSIGPISPKGSFVTAEAADGAAAAAAEIPQEPKVDADEDGMGGAEGEEEPAIPGATVQVLTDGDFERITQASTGATTGDWFVEFYAPWCGHCRKLDGTWTELAEKLGGEVNVGKVDATANRGLVKRFGVKGFPTLLFFSHGNLHKFAGPRKLDSFIEF--GGFKKTDSVPVPGPPSLAGGLKGLLTSVLKDLEGVKDGKMPSQMTIMVLVGSLLXXXXXXXXXXXXXXXXQAPSKRAKTD 774
            MKV+GRK MRCV+AALGLLVLSIG ISPKGSFVTA   DGAAAAAAEIPQEPK+DADEDGMGGAEGEEEP IPGATVQVLTDGDFERITQASTGATTGDWFVEFYAPWCGHCRKLDGTWTELAEKLGGEVNVGKVDATANRGLVKRFGVKGFPTLLFFSHGNLHKFAGPRKLDSFIEF  GGFKKTDSVPVP PPSLAGGLKGLLTSVLKDLEGVKDGKMPSQMTIMVLVGSLL                QAPSKRAK D
Sbjct:    7 MKVVGRKIMRCVIAALGLLVLSIGLISPKGSFVTAGVVDGAAAAAAEIPQEPKMDADEDGMGGAEGEEEPTIPGATVQVLTDGDFERITQASTGATTGDWFVEFYAPWCGHCRKLDGTWTELAEKLGGEVNVGKVDATANRGLVKRFGVKGFPTLLFFSHGNLHKFAGPRKLDSFIEFAKGGFKKTDSVPVPAPPSLAGGLKGLLTSVLKDLEGVKDGKMPSQMTIMVLVGSLLLLLVLFAITLSKPPP-QAPSKRAKAD 265
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BLAST of Ec-27_005660.1 vs. uniprot
Match: A0A836CGC7_9STRA (Thioredoxin domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGC7_9STRA)

HSP 1 Score: 163 bits (412), Expect = 3.650e-46
Identity = 85/160 (53.12%), Postives = 107/160 (66.88%), Query Frame = 1 
Query:  214 IPGATVQVLTDGDFERITQASTGATTGDWFVEFYAPWCGHCRKLDGTWTELAEKLGGE-VNVGKVDATANRGLVKRFGVKGFPTLLFFSHGNLHKFAGPRKLDSFIEF--GGFKKTDSVPVPGPPSLAGGLKGLLTSVLKDLEGVKDGKMPSQMTIMVLV 684
             P A V +LT+ +FE +TQASTGATTGDWFV+ YAPWCGHC++L+ TW ELA  +    VNV KVD TANR + +RFGV+GFPTLL    G  + + GPR L+   EF  GG+   +SVPVP  P   G L  LL++V KDL  V  GK+PS  T+  L+
Sbjct:   36 FPKAEVVLLTEQNFEHLTQASTGATTGDWFVKLYAPWCGHCKRLEPTWDELAAAVAARGVNVAKVDVTANRRVGERFGVRGFPTLLLLHAGRAYTYRGPRTLEKLTEFAAGGYAAAESVPVP--PPRGGALAALLSTVRKDLAAVPQGKVPSFPTLAALL 193
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BLAST of Ec-27_005660.1 vs. uniprot
Match: A0A7S2WDG4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WDG4_9STRA)

HSP 1 Score: 151 bits (381), Expect = 1.210e-41
Identity = 77/135 (57.04%), Postives = 95/135 (70.37%), Query Frame = 1 
Query:  229 VQVLTDGDFERITQASTGATTGDWFVEFYAPWCGHCRKLDGTWTELAEKLGGEVNVGKVDATANRGLVKRFGVKGFPTLLFFSHGNLHKFAGPRKLDSFIEF--GGFKK-TDSVPVPGPPSLAGGLKGLLTSVLK 624
            V VLT  +FE  TQASTGATTGDWFV+FYAPWCGHC+KL   W ELA +L G VNV KVDA A+  L KRF ++G+PTL+FFS G ++K+   R L+S + F  GG+K  T++V VP PP L   LKG    +LK
Sbjct:   30 VVVLTSQNFEHDTQASTGATTGDWFVKFYAPWCGHCKKLAPVWDELATELKGVVNVAKVDAEAHSSLRKRFRIRGYPTLIFFSQGKMYKYEEKRSLESLVAFAKGGYKDDTEAVDVPAPPDLIATLKGEFFGLLK 164
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BLAST of Ec-27_005660.1 vs. uniprot
Match: A0A4D9CPI9_9STRA (Thioredoxin domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CPI9_9STRA)

HSP 1 Score: 150 bits (378), Expect = 4.280e-41
Identity = 74/162 (45.68%), Postives = 100/162 (61.73%), Query Frame = 1 
Query:  238 LTDGDFERITQASTGATTGDWFVEFYAPWCGHCRKLDGTWTELAEKLGGEVNVGKVDATANRGLVKRFGVKGFPTLLFFSHGNLHKFAGPRKLDSFIEF--GGFKKTDSVPVPGPPSLAG-----------GLKGLLTSVLKDLEGVKDGKMPSQMTIMVLV 684
            LTD +FE +TQASTGATTGDW V F APWCGHC+ L  TW E+A +L GEVNV KVDA AN  L  RF ++ FP L FF  G+++ + GPR  +  +EF  GG+K   S PVP PP+  G           GL+ L   ++++++ V  G+ P     +V++
Sbjct:   30 LTDSNFEHLTQASTGATTGDWLVAFSAPWCGHCKHLVPTWEEVAMELKGEVNVAKVDAIANSNLASRFSIRAFPMLKFFHQGSMYDYRGPRNAEQLLEFARGGYKNMPSAPVPVPPTFLGKIKLQLDEVTEGLQALCYQIVREVQAVYKGERPIDTPFIVMM 191
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BLAST of Ec-27_005660.1 vs. uniprot
Match: U6LL83_9EIME (Thioredoxin, putative n=1 Tax=Eimeria brunetti TaxID=51314 RepID=U6LL83_9EIME)

HSP 1 Score: 149 bits (376), Expect = 1.220e-40
Identity = 74/160 (46.25%), Postives = 104/160 (65.00%), Query Frame = 1 
Query:  223 ATVQVLTDGDFERITQASTGATTGDWFVEFYAPWCGHCRKLDGTWTELAEKLGGEVNVGKVDATANRGLVKRFGVKGFPTLLFFSHGNLHKFAGPRKLDSFIEF--GGFKKTDSVPVPGPPSLAGGLKGLLTSVLKDLEGVKDGKMPSQMTIMVLVGSLL 696
            + VQVLTD +FE+ TQA TG+T+GDWFV+FYAPWCGHCRK+   W ELA KL G +NV  +DATAN    +RFG++GFPTLLFF +G ++ + G R +D    F  GG++KT + P+P   S    +K    S ++ L  V   + P  + ++  VG ++
Sbjct:   53 SAVQVLTDANFEQETQAVTGSTSGDWFVKFYAPWCGHCRKMAPAWEELARKLKGRINVAHLDATANPQTARRFGIRGFPTLLFFKNGQMYSYQGSRAVDDLYAFATGGWEKTTAKPIPPVLSWLDSMKDEFLSAVQQLRDVFI-QFPVPLMMLFAVGCIM 211
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BLAST of Ec-27_005660.1 vs. uniprot
Match: A0A7S2V1W0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1W0_9STRA)

HSP 1 Score: 147 bits (372), Expect = 3.190e-40
Identity = 70/120 (58.33%), Postives = 84/120 (70.00%), Query Frame = 1 
Query:  229 VQVLTDGDFERITQASTGATTGDWFVEFYAPWCGHCRKLDGTWTELAEKLGGEVNVGKVDATANRGLVKRFGVKGFPTLLFFSHGNLHKFAGPRKLDSFIEF--GGFKKTDSVPVPGPPS 582
            V VL +  FE +TQASTGATTGDWFVEFYAPWCGHC++L   W E+A +L G VNV KVD T NR L+KRFGV GFPTL FF HG ++ + G R  ++  EF   G+ + D   VP PPS
Sbjct:   40 VIVLDNDSFEHLTQASTGATTGDWFVEFYAPWCGHCKRLTPVWEEIATELKGTVNVAKVDGTQNRKLLKRFGVSGFPTLKFFHHGKMYSYKGARTAEALTEFVKAGYAEQDGEAVPPPPS 159
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BLAST of Ec-27_005660.1 vs. uniprot
Match: A0A812WAE0_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812WAE0_SYMMI)

HSP 1 Score: 147 bits (370), Expect = 5.080e-40
Identity = 80/172 (46.51%), Postives = 104/172 (60.47%), Query Frame = 1 
Query:  196 GEEEPAIPGATVQVLTDGDFERITQASTGATTGDWFVEFYAPWCGHCRKLDGTWTELAEKLGGEVNVGKVDATANRGLVKRFGVKGFPTLLFFSHGNLHKFAGPRKLDSFIEF--GGFKKTDSVPVPGPPS-LAGGLKGLLTSVLKDLEGVKDGKMPS------QMTIMVLV 684
            G+EE +   + V VLT  +FE  TQASTG+TTGDW VEFYAPWCGHC++L   W ELA +L G  NVGKVD T NR L  RF +KGFPT+ FF  G  + + G R L++F+ F  GG+K   SV  P  P+      K +LT  L   + + +G+  +       M I+VLV
Sbjct:   17 GDEETSSKASNVVVLTSANFEMETQASTGSTTGDWIVEFYAPWCGHCKRLQPVWEELATELKGIANVGKVDVTGNRDLGNRFDIKGFPTIKFFRQGQTYDYKGGRSLEAFVNFVKGGYKDAPSVATPDQPTWFETTKKSVLTPFLAAQKDIANGRYMTPNVFVVSMPILVLV 188
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BLAST of Ec-27_005660.1 vs. uniprot
Match: H3G8D9_PHYRM (Thioredoxin domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G8D9_PHYRM)

HSP 1 Score: 145 bits (365), Expect = 1.850e-39
Identity = 72/123 (58.54%), Postives = 85/123 (69.11%), Query Frame = 1 
Query:  223 ATVQVLTDGDFERITQASTGATTGDWFVEFYAPWCGHCRKLDGTWTELAEKLGGEVNVGKVDATANRGLVKRFGVKGFPTLLFFSHGNLHKFAGPRKLDSFIEF--GGFKKTDSVPVPGPPSL 585
            + V VL+  DFE  TQA +GATTGDW VEFYAPWCGHC+KL+  +  +A  L GEVNV KVD TAN  L KRFG++GFPT+L FSHG  +KFAG R L+    F  GGFK  +   V G PSL
Sbjct:   21 SNVVVLSTSDFEHKTQAGSGATTGDWLVEFYAPWCGHCKKLEPIYETVANDLKGEVNVAKVDVTANSELGKRFGIRGFPTVLHFSHGKSYKFAGKRTLEELSAFARGGFKSVEGEVVSGAPSL 143
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BLAST of Ec-27_005660.1 vs. uniprot
Match: D0MU36_PHYIT (Protein disulfide-isomerase, putative n=13 Tax=Phytophthora TaxID=4783 RepID=D0MU36_PHYIT)

HSP 1 Score: 144 bits (363), Expect = 4.510e-39
Identity = 71/123 (57.72%), Postives = 88/123 (71.54%), Query Frame = 1 
Query:  223 ATVQVLTDGDFERITQASTGATTGDWFVEFYAPWCGHCRKLDGTWTELAEKLGGEVNVGKVDATANRGLVKRFGVKGFPTLLFFSHGNLHKFAGPRKLDSFIEF--GGFKKTDSVPVPGPPSL 585
            + V VL++ DFE  TQA +GATTGDW VEFYAPWCGHC+KL   + ++A +L G+VNV KVD TAN  L KRFG++GFPTLL FSHG  +K++G R L+   EF  GGFKK +   V   PSL
Sbjct:   28 SNVIVLSNDDFEHKTQAGSGATTGDWLVEFYAPWCGHCKKLVPIYEKVASELKGQVNVAKVDVTANAELGKRFGIRGFPTLLHFSHGKSYKYSGKRTLEDLAEFARGGFKKVEGEVVNAAPSL 150
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BLAST of Ec-27_005660.1 vs. uniprot
Match: U6JVK8_9EIME (Thioredoxin, putative n=1 Tax=Eimeria mitis TaxID=44415 RepID=U6JVK8_9EIME)

HSP 1 Score: 144 bits (364), Expect = 8.420e-39
Identity = 72/158 (45.57%), Postives = 102/158 (64.56%), Query Frame = 1 
Query:  229 VQVLTDGDFERITQASTGATTGDWFVEFYAPWCGHCRKLDGTWTELAEKLGGEVNVGKVDATANRGLVKRFGVKGFPTLLFFSHGNLHKFAGPRKLDSFIEF--GGFKKTDSVPVPGPPSLAGGLKGLLTSVLKDLEGVKDGKMPSQMTIMVLVGSLL 696
            VQVLTD +FE+ TQA TG+TTGDWFV+FYAPWCGHCRK+   W ELA+KL G++NV  +DAT N    +RF ++GFPTLL+F +G ++++ G R +D    F  GG++KT   P+P   S    +K      ++ L  V   + P  + I+  VG ++
Sbjct:   59 VQVLTDANFEQETQAVTGSTTGDWFVKFYAPWCGHCRKMAPAWEELAKKLKGQINVAHLDATTNPQTARRFSIRGFPTLLYFKNGQMYQYKGSRTVDDLYAFATGGWEKTPGKPIPPVLSWLDTMKDEFMLAIQQLRDVFI-QFPVPLLILFSVGCIM 215
The following BLAST results are available for this feature:
BLAST of Ec-27_005660.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JTA2_9PHAE7.850e-15488.85Thioredoxin domain-containing protein n=2 Tax=Ecto... [more]
A0A836CGC7_9STRA3.650e-4653.13Thioredoxin domain-containing protein n=1 Tax=Trib... [more]
A0A7S2WDG4_9STRA1.210e-4157.04Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A4D9CPI9_9STRA4.280e-4145.68Thioredoxin domain-containing protein n=2 Tax=Mono... [more]
U6LL83_9EIME1.220e-4046.25Thioredoxin, putative n=1 Tax=Eimeria brunetti Tax... [more]
A0A7S2V1W0_9STRA3.190e-4058.33Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A812WAE0_SYMMI5.080e-4046.51Hypothetical protein n=1 Tax=Symbiodinium microadr... [more]
H3G8D9_PHYRM1.850e-3958.54Thioredoxin domain-containing protein n=1 Tax=Phyt... [more]
D0MU36_PHYIT4.510e-3957.72Protein disulfide-isomerase, putative n=13 Tax=Phy... [more]
U6JVK8_9EIME8.420e-3945.57Thioredoxin, putative n=1 Tax=Eimeria mitis TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_27contigchr_27:5225741..5232147 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score470.3
Seed ortholog evalue5.7e-130
Seed eggNOG ortholog2880.D8LB12
Length777
KEGG koko:K13984
KEGG Pathwayko04141,map04141
Hectar predicted targeting categorysignal peptide
Gene idEc-27_005660.1
EggNOG free text desc.cell redox homeostasis
EggNOG OGsCOG0526@1,KOG0191@2759
COG Functional cat.CO
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03110,ko04131
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-27_005660Ec-27_005660Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_27 5224723..5232631 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_005660.1Ec-27_005660.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_27 5225741..5232147 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_005660.1.8Ec-27_005660.1.8Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5225741..5225917 -
Ec-27_005660.1.7Ec-27_005660.1.7Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5226715..5226780 -
Ec-27_005660.1.6Ec-27_005660.1.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5227342..5227425 -
Ec-27_005660.1.5Ec-27_005660.1.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5228333..5228401 -
Ec-27_005660.1.4Ec-27_005660.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5229090..5229142 -
Ec-27_005660.1.3Ec-27_005660.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5229570..5229590 -
Ec-27_005660.1.2Ec-27_005660.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5230081..5230300 -
Ec-27_005660.1.1Ec-27_005660.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 5232061..5232147 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_005660.1CDS:Ec-27_005660.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_27 5225741..5225917 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-27_005660.1 ID=Ec-27_005660.1|Name=Ec-27_005660.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=259bp
MKVIGRKSMRCVMAALGLLVLSIGPISPKGSFVTAEAADGAAAAAAEIPQ
EPKVDADEDGMGGAEGEEEPAIPGATVQVLTDGDFERITQASTGATTGDW
FVEFYAPWCGHCRKLDGTWTELAEKLGGEVNVGKVDATANRGLVKRFGVK
GFPTLLFFSHGNLHKFAGPRKLDSFIEFGGFKKTDSVPVPGPPSLAGGLK
GLLTSVLKDLEGVKDGKMPSQMTIMVLVGSLLLLLVLFATTTLSKPPPQA
PSKRAKTD*
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spliced messenger RNA

>Ec-27_005660.1 ID=Ec-27_005660.1|Name=Ec-27_005660.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=777bp|location=Sequence derived from alignment at chr_27:5225741..5232147- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGAAGGTCATCGGGAGGAAGAGCATGCGCTGTGTAATGGCCGCGCTGGG
GCTGCTGGTACTCTCGATAGGTCCCATCTCGCCCAAGGGTTCCTTCGTGA
CTGCCGAGGCAGCAGATGGCGCTGCCGCCGCCGCCGCCGAGATTCCCCAA
GAACCAAAGGTGGACGCCGACGAGGACGGAATGGGGGGGGCGGAGGGAGA
AGAGGAGCCGGCCATCCCGGGGGCGACCGTCCAGGTGCTGACGGACGGCG
ACTTCGAGAGGATTACGCAGGCGTCGACGGGGGCCACGACCGGCGACTGG
TTCGTCGAATTTTACGCGCCGTGGTGTGGACACTGCCGAAAGCTGGACGG
CACGTGGACAGAGCTTGCGGAGAAGCTTGGGGGCGAAGTGAACGTGGGCA
AGGTGGATGCGACGGCGAACAGGGGGTTGGTGAAGCGGTTCGGCGTCAAG
GGCTTCCCGACGCTTTTGTTCTTCTCGCATGGGAACCTCCACAAGTTCGC
TGGCCCTCGCAAGCTCGATTCCTTCATCGAATTTGGAGGGTTCAAGAAGA
CGGACTCTGTGCCTGTGCCCGGTCCCCCTTCCCTGGCTGGTGGCTTGAAG
GGACTCCTGACCAGCGTGCTCAAGGATCTCGAAGGGGTAAAGGACGGAAA
AATGCCGTCTCAGATGACGATCATGGTGCTGGTTGGGTCTCTTCTGCTTC
TCCTGGTGCTCTTCGCCACCACCACGCTTTCCAAGCCCCCGCCTCAGGCC
CCGTCGAAAAGAGCTAAGACAGACTAG
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protein sequence of Ec-27_005660.1

>Ec-27_005660.1 ID=Ec-27_005660.1|Name=Ec-27_005660.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=259bp
MKVIGRKSMRCVMAALGLLVLSIGPISPKGSFVTAEAADGAAAAAAEIPQ
EPKVDADEDGMGGAEGEEEPAIPGATVQVLTDGDFERITQASTGATTGDW
FVEFYAPWCGHCRKLDGTWTELAEKLGGEVNVGKVDATANRGLVKRFGVK
GFPTLLFFSHGNLHKFAGPRKLDSFIEFGGFKKTDSVPVPGPPSLAGGLK
GLLTSVLKDLEGVKDGKMPSQMTIMVLVGSLLLLLVLFATTTLSKPPPQA
PSKRAKTD*
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mRNA from alignment at chr_27:5225741..5232147-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-27_005660.1 ID=Ec-27_005660.1|Name=Ec-27_005660.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=6407bp|location=Sequence derived from alignment at chr_27:5225741..5232147- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGAAGGTCATCGGGAGGAAGAGCATGCGCTGTGTAATGGCCGCGCTGGG
GCTGCTGGTACTCTCGATAGGTCCCATCTCGCCCAAGGTGAGGTGACTGG
AATTTTGGTCTGCGGCTTTGCACTCTGCACACACATATGGAGAGAGCCGT
TTTCCTTCGTTGTGGTTATGCTGCCGTTTGTTCCGTTCTGCAGGCCGGGT
AGCCGCCAGTCATTGATCGAGAGTTGGAGTTGGATAGCTGTTGCTACAGC
AGTGGTCATAGTGGCATGCCACTCGGGCGATGCCTGCTTCATGATACGAG
GTTGTTCGTTGCGCGCGTGAATATTCCGCTTTGAAGACGTCCGCTGCGCG
TCTGTTGCTCATTGGTCAACGAAGTTTGGAGAGAACCTGTACTTGCAAAT
AACTACAGTCTACAGAGTAGATATAGATATAGAAATAGATACCGGGGGTA
AAGCTTCTGCCGCGAACGAATGCTCGCTGCTTTAGGCAGCTTTAGGCAGT
GAACGTATGTTGCCAAAGCAGAAACGAATCCCGTTTGTTCTTGGTACACA
GCAGACTGCAGTGTACGGTAGGTTGCAGAAGATACCACACCCCCTGGACC
GATCTCTACGTTACGCCCGATCTCTCTACATTGTACGGACAAAGGAGGAT
ACCAACATCAAATGATGTGTGTTCGGAAAGATCTCGACCAGACGTTTCCA
ACGCCGTCATTGCCGGCACCGCCACTGGTTTTGCTGCAGAGTATTGGAGC
TGTGGTAGACATCTACCATGCCACCTGCACGGTGTAGGCCGATGTAGGAC
GCCGCAAAGCGTCGTCTTCGCTCCGAGACCAATAGCCTGACCTTCCAGCG
GGTAGAAATACGCTTGTTCGTTACGATTCAGTCGATGCAGCTGCTTGAGT
TACACCAGGCTGTTGTGCTTATTGGGTACCCGCGAGCTTTTGTTACTTTG
GTACATGCCATACTTCGTACTCCGTACAAGGTTTCCCTGCGGGATGTCAG
TTACGGGCATCCGGCACAGGGTGATCTTTTCAATTTCCCAGGGGGGTGAT
GGCAACAGTTTCATGTACACGTATTTGGATTCCTTTGCCTCTAGTTGAAA
AGGCGTTGGGTGTACACGTCGTAATCAGACACAGAGGTTTCCAAGCGAGG
AACTAAACCAAATTACCGTTGCCGCAGCAATTTGAGCCCTGGCGTGTGCC
GGCAGCTGCGGTCGACCTGCCTCAGCATCTCTGTTAGTACGCCCACGTTC
TCTTGGTCTCTTCTGTTGTGCCGTTTTTTGGAGGATTCATGTGTGTTTGA
CTGCTCAAGTTCGACTGCTGCTGCTGCCGGCATACTCCGCTTTCTTTGTG
TTTCGCGTGGTTTAAGCCAAACTCTGGGACCTAAAGAAGTATTTTTTGGA
TTTTTTTGTGTCAACGCAATGCAATCGCCAGAGTTCAAAAGCAGAAATCG
CGATGCAATCGAGAGCATCATCTCGAAGATCGAGGCCAACATAGCAGGCG
ACAGCAAGTCAGGAAGATACCGACAGATGCTCCTTCGCTCTTATTCCCTT
GTTATGCAGCCCCGACTTTCGTGCTTCCCGGCAATCTACCTACTTGTAAG
CATTTCCGATGCGCCGGCTCTGACCTCTTCAGCATGGACTATGTGTCCAC
CCTCTGTGTTCTGCCGTCCTGACGGGCAGATGACTTGATTTTGAGCCTCA
CTTCAGCATTTCTCATGTATTTTGCGCCAACCCTCGCTCCTTATTTGGTC
AGTGAGGAAACCAACAGGAATTTGACGCTCCAACCTCTAACCCCCCATCA
CAACATTGGGGACGTTTTTTGACCCGATCATCCGGCCGCCAATCAAGGGT
TCCTTCGTGACTGCCGAGGCAGCAGATGGCGCTGCCGCCGCCGCCGCCGA
GATTCCCCAAGAACCAAAGGTGGACGCCGACGAGGACGGAATGGGGGGGG
CGGAGGGAGAAGAGGAGCCGGCCATCCCGGGGGCGACCGTCCAGGTGCTG
ACGGACGGCGACTTCGAGAGGATTACGCAGGCGTCGACGGGGGCCACGAC
CGGCGACTGGTTCGTCGGTGAGAGAGAAAGAAGCGGCAGCAAAGCGAAGC
TCAAGTTTGAGTTGCTCGTCCACAATCACGGGCTGATGGGATGGGTTTTT
GTTTGTCTTGGCTGCAGGGCTTGGTTCTGCTGTGTTGAAGAATGGCATAT
GGCGGCTTTCCATGGCGCATGCAGCCAAGGGTTTCCCGCCGTGGAGTAGT
TGCCGCCCCCCGCGACACTGCGGTCTCCCCCTCCCGTACTCATGTTCATT
GTCGGTGGTGTAGAATATCTCGCGTGTTTGCCTGCTGTACGAATCTGAAA
ACGTTTGCAATGTCTTGCGATGCCTACGCCGCTGATTTCTGCCACGCACG
TGCTCGGGGTGGCGTCGGTGGTGGTCGGACTACCGATGCTTCTGCTACCG
CTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCGTGTGCT
GCTGCTGCTACGTGTGCTGCTGCTGCTGCGTGTGCTGCTGATGCCGTGGA
TGTGCAGAATTTTACGCGCCGTGGTGTGGTGAGAGAAGTGTTCTTTGTCT
CGTGGCCATTATTGTCGTTTGAGTTATGAGGTACCATGGTATTTTGCCAC
CAGTACCCGTGGTGTGCCTCCATTCCCCCATGAGCCTTTCTTCAGCGGTT
TTGGTTTCGGAACTTTGTCCGTCACATCCAAGTCTCGTAGGAATACAACG
AACACTATTTAGTCCAACCAACACAGGGTCCTGAACACTCGCGGCTTGCA
CACGCCAGGCAATGAGATGAGAACGTCGCGACTCAACCCGATAGGCTACG
GAAGTATGTTTGGTGTCGATGAAAAACGCCGTCTATCTCGAGTGGCTCCC
GCTCGTTCGGCTCTGACTATTTTTTAACCCTACTTGAATCTCTTGACCGC
GCTTATTTCTGCCGTGTCCGCCGCTGACTTGACCGCCGCTGTTGCTTCCC
CGTAGGACACTGCCGAAAGCTGGACGGCACGTGGACAGAGCTTGCGGAGA
AGCTTGGGGTGAGTTCGTGCCAGCAGCACTCTTGGTTCTTGCCCGCGAGG
TTCATCTCGACCTCTCGGACGGATGAAGGATGAAAACCAACCTTGTGTTT
TGTTTTTTGTTATTATTGTTGTGGCCTACCACAACGGTGTCCAGCCCGAT
GTCCGACCTTTCAAGACTACGGAATTGAACAGGATAGGAGACTCCCCCTG
CGCGACAGAATCGACGCAGTAAAGCTACTGCTGTGGTAGACACATGCACG
GCATGCTCTCTGAGACTCAAGCCACTGCTGTTCGAGTCGATAGCCACTGC
TGTTCGAGTCGATACTCGATCGTGAGGCGTTCTCTCGTACATCTTGGAAG
CCCCGGGAATGCTCGATCGTGAGGCGTTCGTGCGTACGAAGAACCCGCTG
GGAGTTATGAAGTAGGGCTTCACCACGGATCGAATGGAGCAAGGGTTCGC
TGGTGGTTTGGGCCACCAATGGGAGCATAGTGTTTATCCCCGCACCAAGA
GAGAAACGATTTTCACGGCGGCGGTGGGCTGGAGGTACCGGAACGCGGTT
TGCCAACACGGGCTTCAACAAGTGTCATGTTACTGAAAATTCGCAGTATT
TGATAAGGGGTTCCGAAAATGGTTGTGGTCCCCCAACAAGAAGCTGCCCC
CGGCCTGTGTACCCCGTTTTTGCCGTGTGCGTGCGCTCACAAACAGGGCG
AAGTGAACGTGGGCAAGGTGGATGCGACGGCGAACAGGGGGTTGGTGAAG
CGGTTCGGCGTCAAGGTGATGAATCACTCCCGGTGACCCCGGTCGCTCCG
TTTGCTGTCACTATTTTATTTTGTCTATAGCCGAGTCTTGGAAGTCCTTC
GGATGAATTTTTGCTCACCAGACGGCGACAGTGACAGTGGTCGTGTGGTG
CGTTATTGTTGCAAGCGCTTTTGTTCGTTTTCTGTTTTGTGAGTGACACC
GTAGCAATGGTGTGTTCTTTCCGCTGCTGTCAAATTGTTGATGCAGAGCG
CTCGTTTTTCTTGTATTTCATGACTCTTTCACGTGCTGTTGACATGTCGG
CAAGCCTGAATGTTTTTTTGACGAACAGCGGGGATGACTGGTAGGATGAT
GGTCACTCGAAGCTGGAGTGCTCATTCGAACTATTTGACAGAGTCGTGTG
GGCCGAAACCATACGGAGGTAGGGCCAAGTGTTCGCGGAAGCTGGCTGGC
CTTTCCCGTGTTGTGAAAGAGACACCTCAAAAAGATAAGTTGTTTGTTGT
CGTGGATACATGTGCTCTTGCGTCTACCTTTCCATCATCCACGTCCGTTC
TGCCGCAGGAACTCTACTCGAATTTCTTACAGCTGAGTGTCCACCACCCA
CCTCCACCATGCTGCATGTTATTCCATCGAAGTTATCCCGGCACAGTGGG
GGTCCCTCAATAGTGCCACTGCCCGGTATAGTGCCGGTGAAATAGCGTGG
CACGGCTGGAATGTCAAAGTTGCCACCCTTCTCTGTATGGAGCCGGGTGC
TCGGTATAATTCCAGTTAACCTGACGGGCACATACGGGCACCACACCTCA
GTATTATTTGGTTCCGTTCGTTCGCGGCACCGCGAAAACGCGACGAATTG
TGTCGCCTCGAGGTTCAAATGTATAACCCGCATTTTGCTTGACCCGTGAC
TCTCCCCACGCCGTCCGCACAGGGCTTCCCGACGCTTTTGTTCTTCTCGC
ATGGGAACCTCCACAAGTTCGCTGGCCCTCGCAAGCTCGATTCCTTCATC
GAATTTGCCAAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNGCTCGGACGAGAGGGCGGGGGTGGCTCCATGGCTTAA
CTGTTGCACCAGATTGTGACTGATCATTTTTTTTTTTCTGATGCCGGGCG
CTCCTCTGCAAGTGTCGCGCGTGCCTCTTGGTATGGTATGTTGCTCGGTA
CGCCCTCCCCCCGCGCGGCGGTGTGCATGATCACCACGGAACGAGAGCTC
TGTAGAATCCTTTTTTTTTGCCGACAAGAGCCGCTGGTAGACTCTTCCTT
GTCGCGGTTGCCCGAGAGTCTCATGGAAGTAAAGGCCAAAGTAAAGGCCG
ATCGCCTTTCCGCATCCTCTTGACTACGCTGCATCCGCTCTCGGGTTTCT
CCCATATCATGTTGTTGTTCGTTGAACGCCTCCCGTCACCCGCTCCCGAC
CGGCTCACCCTAACCCTCGTTGTGGTTTCGCGGGTCTCGTGCTTGCTTTT
TGTTGTTTCGAGAGCAGGGAGGGTTCAAGAAGACGGACTCTGTGCCTGTG
CCCGGTCCCCCTTCCCTGGCTGGTGGCTTGAAGGTAATGGGCGGGATGTT
TAAACTTCCCCGTTGTTATTTTTTCAATGCAGTCACTCGCACAATTTTGC
GTGGAGGGCGTACGGATGTTCAAATGTTTCAATTTCTATTTTATCAATGT
ACTCACTCGCACGATTATCCGGGGAGGGCGCACGGCTAACAGGTTCGTGT
TTGGCTGCGAAGTGAAGGTGTGAGTTTGAGAGTGATTTGTGTGAGGACCC
TTGAACTCCAGAGCGTTTTGCGCGAACAGCGGATGGCACAAGAATTTGGG
AACTCAGCAATCCCAAAGGCAGCTCGCGGAGAGAAAATAAGTGCCCTCAG
TTTTCCTGTTGGTCAACACCGGTCCCGCTGATTTCTGATTGGCCGGGAAT
CGTTGACCGGGTGTGGGACGTCAGCCATGGGCGAAAATTCACGTTTTGGC
TTGGATGAGACCCCCCCTCCCATCTTCTGGCTTGATTTTCCATCTCGGCT
TTTGGACCCTCCTCTGCTTGCAAGAGAGGGGGTGGGAAATCTCACGTACC
TTGGTGGGATATTTCACATTTCGTCGATTTAGAGACAGCAGTCTCAATAC
TTCAATTTACCGCCACCTTCGTTCCGGAAGATTTTTTCGACATTCGGTGT
GTGATTTTCAGCTCCCTTTGTTTGCTTGAAATGTGATCAGAGAAGCGTCT
GTATTTTTCCGATGCGCTCTTCGGGCCCGGCGCTATTAGTAAGACCTACT
CTGTCCAGCCGCATGTGATGCCCCTAAAGGCCCTAATCCCGCCCGCTCCA
AACACACACCGTCCGTGGCACGAATAACAGGGACTCCTGACCAGCGTGCT
CAAGGATCTCGAAGGGGTAAAGGACGGAAAAATGCCGTCTCAGATGACGA
TCATGGTGCTGGTTGGGTCTCTTCTGCTTCTCCTGGTGCTCTTCGCCACC
ACCACGCTTTCCAAGCCCCCGCCTCAGGCCCCGTCGAAAAGAGCTAAGAC
AGACTAG
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Coding sequence (CDS) from alignment at chr_27:5225741..5232147-

>Ec-27_005660.1 ID=Ec-27_005660.1|Name=Ec-27_005660.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=777bp|location=Sequence derived from alignment at chr_27:5225741..5232147- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGAAGGTCATCGGGAGGAAGAGCATGCGCTGTGTAATGGCCGCGCTGGG
GCTGCTGGTACTCTCGATAGGTCCCATCTCGCCCAAGGGTTCCTTCGTGA
CTGCCGAGGCAGCAGATGGCGCTGCCGCCGCCGCCGCCGAGATTCCCCAA
GAACCAAAGGTGGACGCCGACGAGGACGGAATGGGGGGGGCGGAGGGAGA
AGAGGAGCCGGCCATCCCGGGGGCGACCGTCCAGGTGCTGACGGACGGCG
ACTTCGAGAGGATTACGCAGGCGTCGACGGGGGCCACGACCGGCGACTGG
TTCGTCGAATTTTACGCGCCGTGGTGTGGACACTGCCGAAAGCTGGACGG
CACGTGGACAGAGCTTGCGGAGAAGCTTGGGGGCGAAGTGAACGTGGGCA
AGGTGGATGCGACGGCGAACAGGGGGTTGGTGAAGCGGTTCGGCGTCAAG
GGCTTCCCGACGCTTTTGTTCTTCTCGCATGGGAACCTCCACAAGTTCGC
TGGCCCTCGCAAGCTCGATTCCTTCATCGAATTTGGAGGGTTCAAGAAGA
CGGACTCTGTGCCTGTGCCCGGTCCCCCTTCCCTGGCTGGTGGCTTGAAG
GGACTCCTGACCAGCGTGCTCAAGGATCTCGAAGGGGTAAAGGACGGAAA
AATGCCGTCTCAGATGACGATCATGGTGCTGGTTGGGTCTCTTCTGCTTC
TCCTGGTGCTCTTCGCCACCACCACGCTTTCCAAGCCCCCGCCTCAGGCC
CCGTCGAAAAGAGCTAAGACAGACTAG
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Synonyms
The feature 'Ec-27_005660.1' has the following synonyms
Synonym
Esi0000_0146
Esi_0000_0146