Ec-27_005480.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-27_005480.1
Unique NameEc-27_005480.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length529
Homology
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BLAST of Ec-27_005480.1 vs. uniprot
Match: D8LB26_ECTSI (ELMO domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB26_ECTSI)

HSP 1 Score: 967 bits (2501), Expect = 0.000e+0
Identity = 528/528 (100.00%), Postives = 528/528 (100.00%), Query Frame = 1 
Query:    1 MSSSVLVCYVIQGDDDDPETGVQSSFRVDRPTPPRTLTLFRLREMFPFEGTFHFRLKVPDANGLSDYCWVDLTTDGDDILELAENLGGLEGGNSGGHPQQRVHLKILPIDFGGPVEHEAAENAPAEAVPAQDFYAGEGVGVAHGPGLGLDAPGARGQATADEDLASGVSGMDIGGGERFDVGDHSGSGTRVARERRGERSFDVDXXXXXXXXXXXXXXXXXXXRSPVGGGSRGEHGDGGRXXXXXXXYGXXXXXXXXXXXXXXXXGAYGDDDEDDTWKASVVNQASQGVKDFQKKTSQVAKTMGFGAKKMWNAINKGVGGPVVPSEEAMENLHELANFLGTPFSATSREHVNDLGKVWMCLFPDDEFEGAESPRWQEAGFQESNVSLDFRGTGVLALKSMVFFCQEYDRKALSLCRAQSAGGSSHYPWAVVANNLTLMLADVLEMRANQFASSRKGYWGVFDRRGAFFEIFCMAFRLLDHTWAERGAKRSNFGQIIGYTKSVIVELLESNPPNLPAFMGQAEEMGMLR 1584
            MSSSVLVCYVIQGDDDDPETGVQSSFRVDRPTPPRTLTLFRLREMFPFEGTFHFRLKVPDANGLSDYCWVDLTTDGDDILELAENLGGLEGGNSGGHPQQRVHLKILPIDFGGPVEHEAAENAPAEAVPAQDFYAGEGVGVAHGPGLGLDAPGARGQATADEDLASGVSGMDIGGGERFDVGDHSGSGTRVARERRGERSFDVDXXXXXXXXXXXXXXXXXXXRSPVGGGSRGEHGDGGRXXXXXXXYGXXXXXXXXXXXXXXXXGAYGDDDEDDTWKASVVNQASQGVKDFQKKTSQVAKTMGFGAKKMWNAINKGVGGPVVPSEEAMENLHELANFLGTPFSATSREHVNDLGKVWMCLFPDDEFEGAESPRWQEAGFQESNVSLDFRGTGVLALKSMVFFCQEYDRKALSLCRAQSAGGSSHYPWAVVANNLTLMLADVLEMRANQFASSRKGYWGVFDRRGAFFEIFCMAFRLLDHTWAERGAKRSNFGQIIGYTKSVIVELLESNPPNLPAFMGQAEEMGMLR
Sbjct:    1 MSSSVLVCYVIQGDDDDPETGVQSSFRVDRPTPPRTLTLFRLREMFPFEGTFHFRLKVPDANGLSDYCWVDLTTDGDDILELAENLGGLEGGNSGGHPQQRVHLKILPIDFGGPVEHEAAENAPAEAVPAQDFYAGEGVGVAHGPGLGLDAPGARGQATADEDLASGVSGMDIGGGERFDVGDHSGSGTRVARERRGERSFDVDXXXXXXXXXXXXXXXXXXXRSPVGGGSRGEHGDGGRXXXXXXXYGXXXXXXXXXXXXXXXXGAYGDDDEDDTWKASVVNQASQGVKDFQKKTSQVAKTMGFGAKKMWNAINKGVGGPVVPSEEAMENLHELANFLGTPFSATSREHVNDLGKVWMCLFPDDEFEGAESPRWQEAGFQESNVSLDFRGTGVLALKSMVFFCQEYDRKALSLCRAQSAGGSSHYPWAVVANNLTLMLADVLEMRANQFASSRKGYWGVFDRRGAFFEIFCMAFRLLDHTWAERGAKRSNFGQIIGYTKSVIVELLESNPPNLPAFMGQAEEMGMLR 528
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BLAST of Ec-27_005480.1 vs. uniprot
Match: A0A6H5KWK7_9PHAE (ELMO domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWK7_9PHAE)

HSP 1 Score: 543 bits (1399), Expect = 1.470e-189
Identity = 314/360 (87.22%), Postives = 320/360 (88.89%), Query Frame = 1 
Query:  511 MDIGGGERFDVGDHSGSGTRVARERRGERSFDVDXXXXXXXXXXXXXXXXXXX--RSPVGGGSRGEHGDGGRXXXXXXXYGXXXXXXXXXXXXXXXXGAYGDDDEDDTWKASVVNQASQGVKDFQKKTSQVAKTMGFGAKKMWNAINKGVGGPVVPSEEAMENLHELANFLGTPFSATSREHVNDLGKVWMCLFPDDEFEGAESPRWQEAGFQESNVSLDFRGTGVLALKSMVFFCQEYDRKALSLCRAQSAGGSSHYPWAVVANNLTLMLADVLEMRANQFASSRKGYWGVFDRRGAFFEIFCMAFRLLDHTWAERGAKRSNFGQIIGYTKSVIVELLESNPPNLPAFMGQAEEMGMLR 1584
            MDIGGG+RFDVG+ SGSGTR ARE RG RSF+VDXXXXXXXXXXXXXXXXXXX  + PVGG S GE+G    XXXXXXX  XXX           XX           WKASVVNQASQGVKDFQKKTSQVAKTMGFGAKKMWNAINKGVGGPVVPSEEAMENLHELANFLGTPFSATSREHVNDLGKVWMCLFPD+EFEG ESPRWQEAGFQE NVSLDFRGTGVLALKSMVFFCQEYDRKALSLCRAQS GGSSHYPWAVVANNLTLMLADVLEMRANQFASSRKGYWGVFDRRGAFFEIFCMAFRLLDHTWAERGAKRSNFGQIIGYTKSVIVELLESNPPNLPAFMGQAEEMGMLR
Sbjct:    1 MDIGGGQRFDVGNDSGSGTRAAREGRGGRSFEVDXXXXXXXXXXXXXXXXXXXXXKRPVGGRSSGEYGXXXXXXXXXXXXXXXXDDDGHDRRYREXXXXXXXXXXXXXWKASVVNQASQGVKDFQKKTSQVAKTMGFGAKKMWNAINKGVGGPVVPSEEAMENLHELANFLGTPFSATSREHVNDLGKVWMCLFPDEEFEGVESPRWQEAGFQEPNVSLDFRGTGVLALKSMVFFCQEYDRKALSLCRAQSVGGSSHYPWAVVANNLTLMLADVLEMRANQFASSRKGYWGVFDRRGAFFEIFCMAFRLLDHTWAERGAKRSNFGQIIGYTKSVIVELLESNPPNLPAFMGQAEEMGMLR 360
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BLAST of Ec-27_005480.1 vs. uniprot
Match: A0A835YT59_9STRA (ELMO/CED-12 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT59_9STRA)

HSP 1 Score: 239 bits (609), Expect = 1.090e-68
Identity = 192/539 (35.62%), Postives = 257/539 (47.68%), Query Frame = 1 
Query:   13 VLVCYVIQGDDDDPETGVQSSFRVDRPTPPRTLTLFRLREMFPFEGTFHFRLKVPDANGLSDYCWVDLTTDGDDILELAENLGGLEGGNSGGHPQQRVHLKILPIDFGGPVEHEAAENAPAEAVPAQDFY---------AGEGVGVAHGPGLGLDAPGARGQATADE--DLASGVSGMDIGGGERFDVGDHSGSGTRVARERRGERSFDVDXXXXXXXXXXXXXXXXXXXRSPVGGGSRGEHGDGGRXXXXXXXYGXXXXXXXXXXXXXXXXGAYGDDDEDDTWKASVVNQASQGVKDFQKKTSQVAKTMGFG-AKKMWNAINKGV---GGP-VVPSEEAMENLHELANFLGTPFSATSREHVNDLGKVWMCLFPDDE----FEGAESPRWQEAGFQESNVSLDFRGTGVLALKSMVFFCQEYDRKALSLCRAQSAGGSSHYPWAVVANNLTLMLADVLEMRANQFASSRKGYWGVFDRRGAFFEIFCMAFRLLDHTWAERGAKRSNFGQIIGYTKSVIVELLESNPPNLPAFMGQAEE 1569
            +L+ YV+QG+ D PETGV+SS  + +    + LTL +L+++FP+ GTFHFRLKV D  G + + W+DLT +GDDI+ELA NLGG+E    G H  + VH+K+LP+ F  PV + +      +A+P    +         A      AH P   ++    R  A  D+  + A        GGG        S  G R  R   G       X                   SP    ++       R    XXX  XXXXXXX              DD   TW ASV +  +  +     +  + A   G G A+K  + INKG    GGP  +P   A+  L +L++ L TPF+   R H   L ++W  LFPD        GA SPRW+EAGFQ  +V  D   TG L L+ MV      D  AL    A  A     YP+AVVA N+TLMLADVL +    +  +R  YWG+F+R  AF ++FC AFR LD  WAER A R  FGQ            L S P  + AF+ +A +
Sbjct:    1 MLLHYVLQGEYDAPETGVESSLELQQE---QDLTLAQLKDLFPYCGTFHFRLKVADNVGTAPHVWLDLTQEGDDIVELARNLGGIERAPRGSH--EVVHVKVLPLSFDAPVLNGS------DALPPDQIFDWNEDVSAAAPAAAAAAHVPAYNVEDAFVRAAAARDDAREFAEPPYLGSSGGGASRSTLHASAQGQRHVRRPSGGXXXXXXXAEGGSGHCRRPLGSSEHAVSPFDSPAQ-------RRPSQXXXXXXXXXXXXRRGSGGMEFQQGDHDDSAQTWTASVNSTITSAINSRAAQDLKQAAKFGLGNARKFLSKINKGGAGGGGPSTLPPVSALATLDDLSHHLETPFNDGVRSHFELLSRLWGLLFPDAPPLAGNGGAVSPRWREAGFQADSVDGDLDHTGTLCLRCMVTLLSSADAPALLRANAARAP-PRRYPFAVVARNVTLMLADVLRLGGRGYCEARASYWGLFERADAFEQLFCWAFRRLDAVWAERNASRDAFGQXXXXXXXXXXXALGSGPETVAAFLERAAQ 520
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BLAST of Ec-27_005480.1 vs. uniprot
Match: L8H196_ACACA (Uncharacterized protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H196_ACACA)

HSP 1 Score: 105 bits (261), Expect = 4.310e-20
Identity = 58/187 (31.02%), Postives = 92/187 (49.20%), Query Frame = 1 
Query:  994 LHELANFLGTPFSATSREHVNDLGKVWMCLFPDDEFEGAESPRWQEAGFQESNVSLDFRGTGVLALKSMVFFCQEYDRKALSLCRAQSAGGSSHYPWAVVANNLTLMLADVLEMRANQFASSRKGYWGVF-DRRGAFFEIFCMAFRLLDHTWAERGAKRSNFGQIIGYTKSVIVELLESNPPNLPAF 1551
            L EL           + EH   L K+W  +FPD   E   S +W+  GFQ ++ + D RG G+L L ++++  + +  K   +   QS      YP AV   NLT ML ++L +         K  + +F D   AF E++C+AF++LDHTWA+  A   ++  +I   +  I ++L  NP  +  F
Sbjct:  291 LWELQQLSDIAHDKENEEHEKMLLKLWSLVFPDTVLESRVSKQWKTMGFQGTDPATDLRGMGLLGLSNLLYMAEFHSDKLRKIIAVQSERKDHDYPVAVAGINLTKMLYELLHIGTED---PTKPIFNIFFDHAHAFEEMYCIAFQVLDHTWADMNASYMDWSNVIAAVRKQISDVLAQNPATIEMF 474
[Close]
BLAST of Ec-27_005480.1 vs. uniprot
Match: A0A1Y1HQQ4_KLENI (ELMO/CED-12 domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HQQ4_KLENI)

HSP 1 Score: 95.1 bits (235), Expect = 7.660e-18
Identity = 55/187 (29.41%), Postives = 94/187 (50.27%), Query Frame = 1 
Query:  985 MENLHELANFLGTPFSATSREHVNDLGKVWMCLFPDDEFEGAESPRWQEAGFQESNVSLDFRGTGVLALKSMVFFCQEYDRKALSLCRAQSAGGSS-HYPWAVVANNLTLMLADVLEMRAN----QFASSRKGYWGVFDRRGAFFEIFCMAFRLLDHTWAERGAKRSNFGQIIGYTKSVIVELLESN 1530
            +E    L      PFS+TS  H   L K+W   +P  +  G  S +W+E G+Q ++ S DFRG G ++L+++++F +++ R    L + +    +   YP+AV   NL+ ML D+L+++A     + A  R     + D   AF  ++  AF LLD  W    A    F  ++   ++ +  LL S+
Sbjct:  125 VERFERLRARASVPFSSTSPSHQEALQKLWRLAYPHQQLTGMVSEQWKEMGWQGTDPSTDFRGGGFISLENLLYFAEKHPRDFQRLLKKEDGERAQWEYPFAVAGLNLSFMLVDLLDLKAEDGVPRSAPGRGFLRFLEDDDSAFDALYVRAFLLLDAEWLRMRASYMEFNVVMKAVRAKLEHLLSSS 311
[Close]
BLAST of Ec-27_005480.1 vs. uniprot
Match: A0A152A7P8_9MYCE (Engulfment and cell motility ELM family protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A152A7P8_9MYCE)

HSP 1 Score: 97.1 bits (240), Expect = 1.850e-17
Identity = 53/175 (30.29%), Postives = 88/175 (50.29%), Query Frame = 1 
Query: 1027 FSATSREHVNDLGKVWMCLFPDDEFEGAESPRWQEAGFQESNVSLDFRGTGVLALKSMVFFCQEYDRKALSLCRAQSAGGSSHYPWAVVANNLTLMLADVLEMRANQFASSRKGYWGVFDRRGAFFEIFCMAFRLLDHTWAERGAKRSNFGQIIGYTKSVIVELLESNPPNLPAF 1551
            F+  S EH + L ++W   +P  + E   S +W+  GFQ ++ S DFRGTG+  L+++V+F + +  K   + + Q       YP      N+T ML + +   A++       +  +F    AF E++ + F++LD TW E      N+ +I    K+ I+  LES P  L AF
Sbjct:  333 FNKDSPEHDSILMRLWTACYPQVKLENRVSEQWKLIGFQGTDPSTDFRGTGIFGLENLVYFAENHTEKFKKIIQNQIDRKDREYPTCTAGINITQMLTNEIFKVADEKVVDMTIFPILFSHPFAFEEVYSITFQILDTTWDEMMGSYMNWQKIFSSVKNQILTTLESKPSTLEAF 507
[Close]
BLAST of Ec-27_005480.1 vs. uniprot
Match: UPI001C360816 (Uncharacterized protein n=4 Tax=Carya illinoinensis TaxID=32201 RepID=UPI001C360816)

HSP 1 Score: 89.4 bits (220), Expect = 5.250e-16
Identity = 50/175 (28.57%), Postives = 87/175 (49.71%), Query Frame = 1 
Query:  988 ENLHELANFLGTPFSATSREHVNDLGKVWMCLFPDDEFEGAESPRWQEAGFQESNVSLDFRGTGVLALKSMVFFCQEYDRKALSLCRAQSAGGSS-HYPWAVVANNLTLMLADVLEMRA--NQFASSRKGYWGVFDRRGAFFEIFCMAFRLLDHTWAERGAKRSNFGQIIGYTKS 1503
            + L  L   L  PF  T  +H   L  +W   FP+   +G  S +W++ G+Q  N S DFRG G ++L++++FF + Y      L   Q    ++  YP+AV   N++ ML  +L++ +   +          + +  GAF E+FC+AF ++D  W    A    F +++  T++
Sbjct:  102 QRLQRLQERLQVPFDETQLDHQEALKTLWHAAFPNIPLKGLISDQWKDMGWQGPNPSTDFRGCGFISLENLLFFARTYPESFHRLLFKQEGKRAAWEYPFAVAGINVSFMLIQMLDLSSVKPRCLPGINFIKLLGEDEGAFDELFCIAFEMMDAQWLAMHASYMEFNEVLQVTRT 276
[Close]
BLAST of Ec-27_005480.1 vs. uniprot
Match: A0A833X553_JUGRE (ELMO domain-containing protein n=8 Tax=Juglandaceae TaxID=16714 RepID=A0A833X553_JUGRE)

HSP 1 Score: 88.6 bits (218), Expect = 6.570e-16
Identity = 49/175 (28.00%), Postives = 87/175 (49.71%), Query Frame = 1 
Query:  988 ENLHELANFLGTPFSATSREHVNDLGKVWMCLFPDDEFEGAESPRWQEAGFQESNVSLDFRGTGVLALKSMVFFCQEYDRKALSLC-RAQSAGGSSHYPWAVVANNLTLMLADVLEMRA--NQFASSRKGYWGVFDRRGAFFEIFCMAFRLLDHTWAERGAKRSNFGQIIGYTKS 1503
            + L  L   L  PF  T  +H   L  +W   FP+   +G  S +W++ G+Q  N S DFRG G ++L++++FF + Y      L  + +    +  YP+AV   N++ ML  +L++ +   +          + +  GAF E+FC+AF ++D  W    A    F +++  T++
Sbjct:   78 QRLQRLQERLQVPFDETHLDHQEALKTLWRAAFPNIALKGLISDQWKDMGWQGPNPSTDFRGCGFISLENLLFFARTYPESFHRLLFKREGIRAAWEYPFAVAGINVSFMLIQMLDLSSVKPRCLPGINFIKLLGEDEGAFDELFCIAFEMMDAQWLAMHASYMEFNEVLQATRT 252
[Close]
BLAST of Ec-27_005480.1 vs. uniprot
Match: A0A2D4BH07_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BH07_PYTIN)

HSP 1 Score: 91.3 bits (225), Expect = 1.990e-15
Identity = 56/203 (27.59%), Postives = 86/203 (42.36%), Query Frame = 1 
Query:  961 PVVPSEEAMENLHELANFLGTPFSATSREHVNDLGKVWMCLFPDDEFEGA----ESPRWQEAGFQESNVSLDFRGTGVLALKSMVFFCQEYDRKALSLCRAQSAGGSSH-YPWAVVANNLTLMLADVLEMRANQFASSRKGYWGVFDRRGAFFEIFCMAFRLLDHTWAERGAKRSNFGQIIGYTKSVIVELLESNPPNLPAFM 1554
            P+ P +  M+  + L   L  P       +   L  +W  ++  D   G       P W   GFQ  + + DFR  G+L+LK +V+F + Y   A  +   Q  G  S+ YPW     N+T MLA             R+  W  F  + A + +F   F L DH W E  A    F +++  T  V++E L+    +L  F+
Sbjct: 2566 PLEPYQSTMQGYYAL---LKQPCVTDDPSYEELLKNMWNAMYTRDSAAGMAFERSGPSWSRLGFQRPDPTTDFRAGGMLSLKCLVYFAENYYEHASRMVEHQVPGSRSNTYPWGPAGINITCMLARTFWSVDGCLYKERQYNWPFFADKSALYIMFSEVFLLFDHLWDEMNAHYGIFSEVMQSTTGVVLEALDEAKGDLQTFL 2765
[Close]
BLAST of Ec-27_005480.1 vs. uniprot
Match: A0A0R3TNJ2_RODNA (ELMO domain-containing protein n=1 Tax=Rodentolepis nana TaxID=102285 RepID=A0A0R3TNJ2_RODNA)

HSP 1 Score: 70.9 bits (172), Expect = 4.120e-10
Identity = 42/137 (30.66%), Postives = 66/137 (48.18%), Query Frame = 1 
Query:  934 NAINKGVGGPVVPSEEAMEN----LHELANFLGTPFSATSREHVNDLGKVWMCLFPDDEFEGAESPRWQEAGFQESNVSLDFRGTGVLALKSMVFFCQEYDRKALSLCRAQSAGGSSHYPWAVVANNLTLMLADVLE 1332
            N  NK +   V  S   +      +H + +   T F   + +H N L ++W  L P++ F    S  W + GFQ +N S DFRGTGVL  +++ +F + +   A S+  + S      YP+A    NLT +   +LE
Sbjct:   36 NIFNKSISAVVKTSLVQIRGYRSLVHSVKSLKETKFQVDNSKHTNILKEIWNGLLPNEPF-SLNSKLWSDVGFQGTNPSTDFRGTGVLGAQNLAYFIKHFHEYA-SIVHSGSVDAKYWYPFATAGINLTDLTWRLLE 170
The following BLAST results are available for this feature:
BLAST of Ec-27_005480.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
D8LB26_ECTSI0.000e+0100.00ELMO domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KWK7_9PHAE1.470e-18987.22ELMO domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A835YT59_9STRA1.090e-6835.62ELMO/CED-12 family-domain-containing protein n=1 T... [more]
L8H196_ACACA4.310e-2031.02Uncharacterized protein n=1 Tax=Acanthamoeba caste... [more]
A0A1Y1HQQ4_KLENI7.660e-1829.41ELMO/CED-12 domain-containing protein n=1 Tax=Kleb... [more]
A0A152A7P8_9MYCE1.850e-1730.29Engulfment and cell motility ELM family protein n=... [more]
UPI001C3608165.250e-1628.57Uncharacterized protein n=4 Tax=Carya illinoinensi... [more]
A0A833X553_JUGRE6.570e-1628.00ELMO domain-containing protein n=8 Tax=Juglandacea... [more]
A0A2D4BH07_PYTIN1.990e-1527.59Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A0R3TNJ2_RODNA4.120e-1030.66ELMO domain-containing protein n=1 Tax=Rodentolepi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_27contigchr_27:4943385..4951962 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score975.3
Seed ortholog evalue1.1e-281
Seed eggNOG ortholog2880.D8LB26
Length1587
Hectar predicted targeting categoryother localisation
Gene idEc-27_005480.1
EggNOG free text desc.ELMO domain-containing protein
EggNOG OGsKOG2998@1,KOG2998@2759
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-27_005480Ec-27_005480Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_27 4943385..4951962 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_005480.1.13Ec-27_005480.1.13Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 4943385..4943489 -
Ec-27_005480.1.12Ec-27_005480.1.12Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 4943926..4944000 -
Ec-27_005480.1.11Ec-27_005480.1.11Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 4944750..4944926 -
Ec-27_005480.1.10Ec-27_005480.1.10Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 4945496..4945579 -
Ec-27_005480.1.9Ec-27_005480.1.9Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 4946116..4946171 -
Ec-27_005480.1.8Ec-27_005480.1.8Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 4946761..4946813 -
Ec-27_005480.1.7Ec-27_005480.1.7Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 4947499..4947641 -
Ec-27_005480.1.6Ec-27_005480.1.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 4947979..4948053 -
Ec-27_005480.1.5Ec-27_005480.1.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 4948914..4949252 -
Ec-27_005480.1.4Ec-27_005480.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 4949854..4950018 -
Ec-27_005480.1.3Ec-27_005480.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 4950292..4950435 -
Ec-27_005480.1.2Ec-27_005480.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 4950856..4950990 -
Ec-27_005480.1.1Ec-27_005480.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 4951927..4951962 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_005480.1CDS:Ec-27_005480.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_27 4943385..4943489 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_005480.1Ec-27_005480.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_27 4943385..4951962 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-27_005480.1 ID=Ec-27_005480.1|Name=Ec-27_005480.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=529bp
MSSSVLVCYVIQGDDDDPETGVQSSFRVDRPTPPRTLTLFRLREMFPFEG
TFHFRLKVPDANGLSDYCWVDLTTDGDDILELAENLGGLEGGNSGGHPQQ
RVHLKILPIDFGGPVEHEAAENAPAEAVPAQDFYAGEGVGVAHGPGLGLD
APGARGQATADEDLASGVSGMDIGGGERFDVGDHSGSGTRVARERRGERS
FDVDDDDDDDDNDGRFGAGGGGGRSPVGGGSRGEHGDGGRRGDRGRGYGD
DGDDDGHDRRYRGGGGAYGDDDEDDTWKASVVNQASQGVKDFQKKTSQVA
KTMGFGAKKMWNAINKGVGGPVVPSEEAMENLHELANFLGTPFSATSREH
VNDLGKVWMCLFPDDEFEGAESPRWQEAGFQESNVSLDFRGTGVLALKSM
VFFCQEYDRKALSLCRAQSAGGSSHYPWAVVANNLTLMLADVLEMRANQF
ASSRKGYWGVFDRRGAFFEIFCMAFRLLDHTWAERGAKRSNFGQIIGYTK
SVIVELLESNPPNLPAFMGQAEEMGMLR*
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spliced messenger RNA

>Ec-27_005480.1 ID=Ec-27_005480.1|Name=Ec-27_005480.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1587bp|location=Sequence derived from alignment at chr_27:4943385..4951962- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGTCCTCGTCGGTACTTGTGTGCTACGTGATACAGGGAGACGACGATGA
CCCCGAAACCGGCGTGCAGTCTAGCTTTCGCGTGGATCGGCCGACCCCGC
CGCGGACGCTGACGTTGTTCCGGCTGAGAGAGATGTTTCCCTTCGAAGGG
ACGTTTCACTTCCGGCTCAAGGTGCCGGACGCGAACGGCCTGTCGGACTA
CTGCTGGGTAGACCTCACCACGGACGGGGATGACATTCTGGAGCTGGCCG
AGAACCTCGGGGGGCTGGAGGGCGGCAACAGCGGGGGCCACCCGCAGCAG
CGGGTGCACCTCAAGATTCTCCCTATCGATTTCGGCGGCCCTGTTGAACA
CGAGGCCGCGGAAAATGCTCCAGCAGAAGCAGTACCGGCACAGGATTTCT
ATGCCGGGGAAGGGGTGGGAGTGGCTCACGGTCCGGGGCTCGGGCTCGAC
GCGCCAGGAGCGAGGGGACAAGCGACTGCGGACGAAGACCTTGCGTCCGG
GGTGTCGGGGATGGACATAGGTGGCGGAGAGCGATTCGACGTCGGAGACC
ACAGCGGCAGCGGCACCAGAGTGGCGCGGGAGAGGCGGGGGGAGAGGTCC
TTCGACGTTGATGACGACGATGACGACGACGACAATGATGGACGCTTTGG
TGCGGGTGGGGGCGGTGGCAGGAGTCCCGTCGGTGGCGGGAGTAGGGGCG
AGCACGGCGACGGAGGGAGGAGAGGGGACAGGGGACGGGGGTACGGCGAC
GATGGCGATGATGACGGCCATGACCGCAGATATCGCGGGGGCGGGGGCGC
GTACGGTGACGATGACGAGGACGATACTTGGAAGGCTTCTGTGGTGAACC
AGGCTTCCCAGGGGGTCAAGGACTTTCAAAAGAAGACCTCTCAGGTGGCC
AAGACGATGGGATTCGGGGCAAAAAAGATGTGGAACGCGATCAACAAGGG
CGTCGGAGGCCCCGTGGTTCCTTCCGAAGAGGCGATGGAGAACCTCCACG
AACTGGCCAACTTCCTTGGAACCCCCTTTTCCGCCACGAGCCGGGAGCAC
GTGAACGACCTCGGGAAGGTGTGGATGTGCCTCTTCCCAGACGACGAGTT
TGAGGGCGCCGAGTCTCCGAGATGGCAGGAGGCGGGGTTTCAAGAGTCGA
ATGTGTCCCTGGACTTCCGCGGCACAGGTGTCCTGGCGCTCAAGTCAATG
GTCTTCTTCTGCCAGGAGTACGACCGAAAGGCACTATCGCTGTGCCGAGC
GCAGTCGGCAGGGGGTTCCTCCCACTACCCTTGGGCGGTAGTGGCCAACA
ACCTTACCTTGATGCTGGCTGATGTCTTGGAGATGCGGGCGAATCAGTTC
GCGTCGAGCCGGAAAGGATACTGGGGGGTGTTCGACAGGCGGGGGGCGTT
CTTCGAGATTTTCTGCATGGCCTTCAGACTACTGGATCACACCTGGGCGG
AACGAGGCGCGAAGCGGAGCAACTTTGGCCAGATCATTGGATACACGAAG
AGTGTCATTGTGGAGCTTCTGGAGAGCAACCCTCCGAACCTCCCGGCGTT
CATGGGGCAGGCGGAAGAGATGGGCATGCTGCGATGA
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protein sequence of Ec-27_005480.1

>Ec-27_005480.1 ID=Ec-27_005480.1|Name=Ec-27_005480.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=529bp
MSSSVLVCYVIQGDDDDPETGVQSSFRVDRPTPPRTLTLFRLREMFPFEG
TFHFRLKVPDANGLSDYCWVDLTTDGDDILELAENLGGLEGGNSGGHPQQ
RVHLKILPIDFGGPVEHEAAENAPAEAVPAQDFYAGEGVGVAHGPGLGLD
APGARGQATADEDLASGVSGMDIGGGERFDVGDHSGSGTRVARERRGERS
FDVDDDDDDDDNDGRFGAGGGGGRSPVGGGSRGEHGDGGRRGDRGRGYGD
DGDDDGHDRRYRGGGGAYGDDDEDDTWKASVVNQASQGVKDFQKKTSQVA
KTMGFGAKKMWNAINKGVGGPVVPSEEAMENLHELANFLGTPFSATSREH
VNDLGKVWMCLFPDDEFEGAESPRWQEAGFQESNVSLDFRGTGVLALKSM
VFFCQEYDRKALSLCRAQSAGGSSHYPWAVVANNLTLMLADVLEMRANQF
ASSRKGYWGVFDRRGAFFEIFCMAFRLLDHTWAERGAKRSNFGQIIGYTK
SVIVELLESNPPNLPAFMGQAEEMGMLR*
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mRNA from alignment at chr_27:4943385..4951962-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-27_005480.1 ID=Ec-27_005480.1|Name=Ec-27_005480.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=8578bp|location=Sequence derived from alignment at chr_27:4943385..4951962- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGTCCTCGTCGGTACTTGTGTGCTACGTGATACAGGTGAAACGCAAGGA
ATATTTATCTCCATCTCTAGAGACGTCGGAACTTTGCTGCGTACTCTTCT
CAGCGCTCCTGTGTTTGTTCCTCCATAAGTCCTCTTCGTTAGCGAATGGG
AGAGACCGGGTGTTGCCCTGACGTTCAAGTCAAAGGGAGGTGCACAAGCA
CCGGTAAGCAGAAGCTGGTGTGGCAGGCTCTCGTTCCGTAGGTGATTGTT
CCATCGCATCTGCCGTGAGCAAATGCGAAGCGTGTACTGCCCTCTACCGA
GTGGTAGCAGACATCAGTATTTAGGTAGAGCATTATGTGTAGCAGACACG
GACCGGCCTCTTTGCTCGTTCCCAAAGAGACAGCGCGCAGCAGTTTCTCC
CGTGTACTGTACCCGCCGAGGCCAATGCAACAGCAGTGCAACAGCGATGG
CGATCAATTCTTGAAGGGGGTCTCGCGGTCATCCCCTATCGGTGGCGGTC
TAACTCTGTGTACTCAATAAAGCGCACTGCCCCCCAGGAGCTCCCCGTCA
GTCGAGAACGCCAAGCTCAATGCAGTGCGGAGACTGAATGCGCCCCCCCC
GAAACAAGGTTCGCAGTTTCGACTGCTGTGTTTGTCGTCGTTTCAAGCCA
AATACTCATGTGCGTGTAGTGGGATGGCATGGTAAGCATGCCTTCGGCGG
AACTTCTGTTCCATCCCATCCCATTTCCGTTCCATTTCCACCCAACTCAT
CATCCCATCAACAACGGGACGCAGTGCCTGGGTGCAAAACGACAACACCG
CCATGAGGGGCGACAGATAGCCAAGAGTCTAAGGCAGTATTCCCTGAAAC
CCTTTCTTACTGGCGCTCCAACCCGTGTTCCGTGTTCCGTGTTCCATACT
CCTCGTTTTCTCGGTTCTGCCTCCCGCGGGCATGCTGCGTTCCTCCCAAC
CACGCTCGGCCGTCGTACCCAGGGAGACGACGATGACCCCGAAACCGGCG
TGCAGTCTAGCTTTCGCGTGGATCGGCCGACCCCGCCGCGGACGCTGACG
TTGTTCCGGCTGAGAGAGATGTTTCCCTTCGAAGGGACGTTTCACTTCCG
GCTCAAGGTGCGTTGAGGAGACCGGTTGGGAAATGCGTTCAAAACTTCGC
AACACACCTTTGAGACGGGAAGAGATGCTCGCATGAGCGTATGTATCAAG
AACCACGGTCAACGATGATGCAGGCCTCCGACAGAGATGTTTACCCGTAA
GGTTCAGTCGCCGAGAGCTGACAGGCCAACTCCCGCGAGCGCAGCAGTCC
AAACGCCGCCACCACACCACCACGTGCGTGCCCGATGACGTTCCCACTAA
ATAGGTTGCCGAAAGCACCGGCTGTGTATCACCGACTGCGCCACACACTG
GGGTTGGCGTCCCTTGTTTTTTTATACACGCGGACTTCTTTCGAGAGCAT
TTAGTCGAAACTCTGGTTGCACGTTTTCGTGCGAGCGTCGTCCGTCCTGC
GGCTAACCGTTCCGCGCGACGCGTCAGGTGCCGGACGCGAACGGCCTGTC
GGACTACTGCTGGGTAGACCTCACCACGGACGGGGATGACATTCTGGAGC
TGGCCGAGAACCTCGGGGGGCTGGAGGGCGGCAACAGCGGGGGCCACCCG
CAGCAGCGGGTGCACCTCAAGGTTCGGACAGGGCGTGCCCCCTTTCTGCA
ATCGGTCGCCAGAAAACACGGCTGTGGCAACGCCGGACTCTGGGTTGCTT
TAGGAGCTGTGCCGTTTTTTTGGGTCAGGAAGTGGTTGGCTGTTTTCGGT
TTCAAGTTTCCGCCTTCAAGAACGAGACATATCTCATCGACCGGCGACCT
CCGTGTAGGGAAAGCCGCCAACAGCAGCAGCGATTGTCTCTCTCGGGTCT
GACTCATTCCTCGTGGTCGTCTGTACTTGGGTGTGTGTGTGCAGATTCTC
CCTATCGATTTCGGCGGCCCTGTTGAACACGAGGCCGCGGAAAATGCTCC
AGCAGAAGCAGTACCGGCACAGGATTTCTATGCCGGGGAAGGGGTGGGAG
TGGCTCACGGTCCGGGGCTCGGGCTCGACGCGCCAGGAGCGAGGGGACAA
GCGACTGCGGTGAGATAGGTGTTGCAGATCGTCGGGGGAGAGGATGGTGC
TGAGCGAGAGTTAGGCTAGCGATGACGATTGTGCGGGCCACCATCTGGGC
ATGTTTTTGATCGGCGACAAGTCTACACGCGGCCGTGTGTATAGCGGCCG
TGTGTATCGAGTTAGGTGGAAACCCATTTTGTCGGGCGATTCCCCCGTGT
AGTGAAAGGCGCAAGCACGCATTGCCCTAGACACCCCGACGCTTTTAACT
TGGTAGCATAGCAATTGACTCATCTGGGAAGGCCTCACCCGCACATGATT
GTCTGCTAGAGAGATAATGTTTCGTGTGGCCATTGCTGTCGCCCTCTGTC
AACACCCTGGACTCCTCTCTGGCGGTACAGCCCCCGACTACCAAAGATCC
ATCCTCAGCCCCCCGTGCACGCATGAGCAAATCATTCCTCTGGAGGAGGG
GGGCGTTTTCACCGAATCCAAACTAAGACTTCGCCCATTTGTTTTCGGGT
CGTGAGAACGGAATACAGGCTCGGTTTCCGTCCTGGCGGGTGTTTCACAG
CATTTGGCAGTATATATGCATGATACCGCGTACCCCCTCTCTCTGTTTTG
TCGTTCTCAGGACGAAGACCTTGCGTCCGGGGTGTCGGGGATGGACATAG
GTGGCGGAGAGCGATTCGACGTCGGAGACCACAGCGGCAGCGGCACCAGA
GTGGCGCGGGAGAGGCGGGGGGAGAGGTCCTTCGACGTTGATGACGACGA
TGACGACGACGACAATGATGGACGCTTTGGTGCGGGTGGGGGCGGTGGCA
GGAGTCCCGTCGGTGGCGGGAGTAGGGGCGAGCACGGCGACGGAGGGAGG
AGAGGGGACAGGGGACGGGGGTACGGCGACGATGGCGATGATGACGGCCA
TGACCGCAGATATCGCGGGGGCGGGGGCGCGTACGGTGACGATGACGAGG
TGACGCTGTTGGTTGCCGTTGGCTGGGTGCGGTCAGTAGGGCGTACTCAT
GGCTGTGCATGCCGTAGAGTTGGACCATTGACCACGCAGGGGGGATGCGG
GCGTATGTGCTATTTTTCTGACACGGTAGCAGTGGACCCTTCCAGACGAG
AGGTGTTCACAGCTTGAAAACGAGAGGAGGAGTTAAGGGTGCAGCGAAGA
TTTGAACATTTGGTGGAGGTTGTAGAAATGGAATTGGCGGGAGCAGTAGC
CGGTAGACTCGTGGTGGAAGGAGAACGTTTAGGAAGCGAGCGGAAAGTTT
GTGTATTTGTTCCGCTACTATTTTCCTAGATAATTCTGGTGATATCGGCG
GGCGCTCATATAGGGCGGATGCTGGGCTTCTCTGTTGGTACTCTGTCCCA
GTTATCACCGTCACCAGTTATCGGTATGCAAGAGTTGGATTGTTTGTGTC
TGGCGGGGTGAGCGTGGTTGGGTAGAGTATATCGTTTGCGGATGCGTGTA
GCAGGCCATGTCCCTGAAACGGACTGTTTGTGTCTGGAGGGCTGAGCGTG
GTTGGGTAGAGTATATCGTTAGCGGATGCGTGTAGTAGGCCATGGCCCTG
AAACCATGCTTCGGTCATGGCGTGCCAATCATGTGCCAGTGGTAGTATTT
TTGTTTGTCGTTTCGGCGGTTGGGAGTTCTTGCGATATGCCATGCGTGTC
TCTTTTGCCTGACGCCCCCCTCTTCCACTTACCATCTTTTCTTCCCGACG
TCCCAACCCGACTTGATAGTTGCTTTTCGCCAGGTGCCTGTTTATTTTGT
TCCAAGCTGGCTTTCTCTTCTGTTATATGTATTTGTTTCGTTCCTGCCTG
TCTCCGCAGGACGATACTTGGAAGGCTTCTGTGGTGAACCAGGCTTCCCA
GGGGGTCAAGGACTTTCAAAAGAAGACCTCTCAGGTATGCATGTGTCTTA
AAATGATCTTCCGACGGTCGTCGTGTTTTCCCGCCGTTGCGCTTGTCCTT
TCTGTTGACGGAACGATGGCAATATTGTCTTCGCCAATGTAATTGGTAGC
TAATGGAGATGTGTAGAGGATCGAGGGGTTACATGGGTTTGTGACCGCGG
GGAAGAGGGAGAGCTGGGTGGGTGGTTGACACCACCCTTTAGCGCTTGTT
GTTGCAACTGTTTGCTGAGACCTCATCCAACATAGGCATCCGACCTATTC
GTGACGCCAATCGACCGACGGAATTCTCGTTGTTGGTGTCGGTGTTGCCT
CCGCTCCCTACGGCTGGGCAGGTGGCCAAGACGATGGGATTCGGGGCAAA
AAAGATGTGGAACGCGATCAACAAGGGCGTCGGAGGCCCCGTGGTTCCTT
CCGAAGAGGCGATGGAGAACCTCCACGAACTGGCCAACTTCCTTGGAACC
CCCTTTTCCGCCACGTGAGTAGGCAGGCAGACGAATACAAACAACAGCGT
GCAAACGTGTTGGGAAGTACTCTGAGCGATGCCGCGCGCGGCGTGAGTTG
GTGCTTTGCACCCGTTGACTGGAGCCGTTGCGTTTCCACATTCCGGCCAG
CCTTTCTCATGCTGGTAATCCTCTTTCTGGTACACCGTGGTCCACCACGA
GACAGACATCTCTGGTCGTTGGGCAAAACCTATTTATTTCGTTGTTTCGG
CTGTTGATTCCGCGTAGGATCCTTTCGTGTGTCTTTCACGTAGTACCGAG
GTTTTCGTTTGCGAGAGGGGAGGCGCTACCGCAAGCACGCCAAACCCGAC
AAGCTTTGACCCCGAGGCTTCCCAACTGCTGTGCTCCCGTGTGGCCCGGA
ACGGCACACTACTTGCTCCTGTGTTTTTCGTCCTTCTTAAGTATGGCCGT
GTCGACCCATTCTGCGGCGCCCCCCCGTTTTTCCTATTCTTCCAAGACGA
AGAACACCGAATTTGGGGGCCACGTCACCTGCCCCTAAACTACGGACCGG
ATGCGTTCGTTGCAACTAAGAAGCGGCGGTTAGGTCTTCGGGCGATGATT
TCTCTGCCGCGCACTGATAGCAATGCCGAAAGTTGTGAAAGGCTGGCTCT
TCTCTCTCATACCCCATCCCTCCTGATGAACTTCTCCGGCACCTCGCAGG
AGCCGGGAGCACGTGAACGACCTCGGGAAGGTGTGGATGTGCCTCTTCCC
AGGTGGGATATATCAGAGATTCCGGCTGACGCTTGTCCCAGTTTTGGAAG
AATCTGCGGCGTTGTTGTTGGGGAGGATGTGTTTGGGAAGGTTCCCTGCT
GTACAAGCGATGTTTTTGGTGTTGTCCGCTCTGATCGGCGAGGTGATCAA
GGGTCCAGTACACGTGCTTGCCACGGTATTCTATGGGTAATCGAAATTCT
TCCTTTTCATCGGAGACCGCGTGTTCAAGTTGGCACCGAAATCTGGCTTT
AGGCGCGCACGAACATGGACACTGGTTATTGCTTTGAGTCACCACACTTG
TTCTTTGGAGAACGCCGTCATAGACCATCCCTTGACCGACACGTCCCATG
GTAGGTAAGTGTGTACGCCGGTATTACGCGAAGGCTGCTCTCTTGCTTCG
CTTGGGTGGTGTGTGTGACATACTTGAAGCATCGTGGGGTGCCGTGGGCT
TGAAGAGCACATTGCATACGTTCCTTCCTTTCACTCTCTCCCTCTGTGAC
CCCTTCTCTCTCTCTCCTCCCCCCCCCCACTCCCCCCCACCCTCTCTCTC
TCTCTCTTCTTTCCCCCACTTGGTGCACGGATTGACCACAGACGACGAGT
TTGAGGGCGCCGAGTCTCCGAGATGGCAGGAGGCGGGGTTTCAAGAGGTG
AGAGGGCGTGTTGTTGCGTGTGTTCGTCGGGTGGTGGCACCCTTGAAAGG
CCTTGTCTCTCTAGCGTGACTACATCCGGCACTTTGACGATCCCTGGTCG
TAGGTTGTGGGTACGGAAGCTGTACAGAACACTGGGTAACTTGTTCATTG
GCCCCACGCGCCGTGTTAGACATTGGGAAAAGCGCGGCACAGGAACGAAA
TGTTCAGTAGATTTGGACAGCCCCCTTTCCCATTGGGCACGACGGCGAAG
CTTGGGAGAAGCATTTCACCCCCCGGCCGGTTGCGCAGCCGAAACGGCTG
ACAAATAGCTGTCCCGTGCTCTTGTTTCTTCTGCAGTCCTGATGCAGTTT
GGCTCGCTCGGGATGGATGTGGTTGCCGCTTTGCGTGCCCTCTCCCACGT
ACTTACCTCACCGGCCTCCGGACGGCTCATCAATATGATGCATGGATGAA
CTCCACCCCCGATCGTCACATCCTTCCGCTTGTCCCTACCGTATGGATCG
ACTTGGGACCGTTTCGATGGTCGTCTCGCGCAGTCGAATGTGTCCCTGGA
CTTCCGCGGCACAGGTGTCCTGGCGCTCAAGTCAATGGTCTTCTTCTGCC
AGGAGTACGACCGAAAGGTGGGCTGTTCGTGCATGCCTCCAATGGGTCTC
TGTCCCCTAGAGCGTAGCCTTCGACAATCTCCGCGAGCCGAAGTTAGGCT
GGAACAGGGTGCCTCCAAGTCGGACATGTCGCGTTTTTGTCGGGGAGGTC
GAGTCGTGAGTGGATGCGTCGTCCTTCGTTGCCGTGGCGGAAGCATTAAA
CCTGGCCACTTATGACCTTGGAGTCGAACAGACCGTCGTAGTACCTTTAA
AGGAGAAATGGGCACGGTGCCGAATCCTCGTGGTTGCCAGGAGTTCTCTT
GGAATCCAAAGCAAACGTGATTTGCATAGCAGAGGGCCAGGCGGCGTCTG
CCAACTCTTTCGAGTCATGGTGCGCATCCCTCTCTCGCTCCTGTCCCCTC
TCTTCTAACCTTCTGTCGTACTTTCCACTACACACCAGGCGTTTAAGCCT
TGATGCATGGCCCTCTCTCGCCCCTGTCCACTCTCCTCTATCTTATGTCG
CACATTCCACTGCATTCCGGGAAGTCATCATATACGTCCCTCTCTTGCCC
GTGTCCTCTCCCCTCTATCTTCCGGTGTCATTCCAGGCACTATCGCTGTG
CCGAGCGCAGTCGGCAGGGGGTTCCTCCCACTACCCTTGGGCGGTAGTGG
CCAACAACCTTACCTTGATGCTGGCTGATGTCTTGGAGATGCGGGCGAAT
CAGTTCGCGTCGAGCCGGAAAGGATACTGGGGGGTGTTCGACAGGCGGGG
GGCGTTCTTCGAGGTAAAGCTATTTTTCTGTGTCTTCAAATAACTTCCGA
ATGCATGGGCCCATTTTTTTTTTTGTGTTTGAGAGAAGACCGCTTTTCGT
GCTTCCTTGGCATCACTCGCCCTGGTAGGGGGCAACGTTGCGCACGTTAC
AAGGCTCGAGCTTTCGCTATCGGTGAAGCAGACGCGCACATTTGAGTGGT
TCTACTGTTTTATGATGGTATCTAGCTTGGGGTTTCAGAAGGAGGGAAGA
CAGACGAAGGGCGGCCTCTTTGTTTTGCTGCTTGTGTGTGTCGTCTTGAG
TTGGACCCGGGTGGTGCTACTGCCAGTTCTGCACACACAAGCCGACGCTC
GCGTACAGTCGTGCTTTGCCAGGAGCGTTTTTACTCCTCGTATCATGTCA
CGACACTGACCTTCCGGGTGTCTCCTAGGCGCGCGAGGTGTCCACGGCGA
AACACACAAGCCTCAACACCTTTTCTACATTTGTGGGTTCCTGTCTGGTG
TACTAGAGGTTTCCCAAAACGTAAAAGGGTGGGTCTTCAGCGCCCCGAAA
GGCTTTCAGACGCATCAGGTGCTACGTCCATCGCTACTGAAACCCCAGGC
CGTCTGCCGGCCCCCGTGGGTTTGTGCGGATATCATGAAAACCCAAGTCT
GCAGTATCCATCCATTCCGTTCGCTGAAGAATTGGCTTGTCGTGTCAGAT
CTTTTGCTGCCACTCACTCACTCTCAACACGGACCGGGACCATTCGTTTT
TGCTTTTTTCAGATTTTCTGCATGGCCTTCAGACTACTGGATCACACCTG
GGCGGAACGAGGCGCGAAGCGGAGCAACTTTGGCCAGGTGGGAAGCAGAT
GAAAGTAAAGCTATGGAGCCGAAAGGGTAACTTGCTCCGTTGTCTTGTGG
GTAGCTGGACAAGTAGCCCCCTTGGGATCGCTACGTAGCAGCACGGCATT
ATAGGAACCCAGCCTAACATTGGGGGATGGATAGATAGCGCGATATCGGG
GTATACACCGCTGGGGGAGGAGACACATGCTGCATTGCTCTGCGATCGGT
GGTCTCCCATGCTCGGCCAATAACGACCCAGTGTTCGATCCCAACCCCCT
TCCTACAGGCTCAAAGTCTGGGCATGACAATTGCGTCCACTCGGAAGGAG
CCGTTCAGCGGATTTTTCTCCCTGCCTCAGTCTCAAGCATGGCTAGACTA
CATCCGCTCCAACGTTGCCCTCGCCACCGCCGCCGCCGCGTTCTTTGCCT
GCTTGCACCCTCGTGGCATGCAGATCATTGGATACACGAAGAGTGTCATT
GTGGAGCTTCTGGAGAGCAACCCTCCGAACCTCCCGGCGTTCATGGGGCA
GGCGGAAGAGATGGGCATGCTGCGATGA
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Coding sequence (CDS) from alignment at chr_27:4943385..4951962-

>Ec-27_005480.1 ID=Ec-27_005480.1|Name=Ec-27_005480.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1587bp|location=Sequence derived from alignment at chr_27:4943385..4951962- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGTCCTCGTCGGTACTTGTGTGCTACGTGATACAGGGAGACGACGATGA
CCCCGAAACCGGCGTGCAGTCTAGCTTTCGCGTGGATCGGCCGACCCCGC
CGCGGACGCTGACGTTGTTCCGGCTGAGAGAGATGTTTCCCTTCGAAGGG
ACGTTTCACTTCCGGCTCAAGGTGCCGGACGCGAACGGCCTGTCGGACTA
CTGCTGGGTAGACCTCACCACGGACGGGGATGACATTCTGGAGCTGGCCG
AGAACCTCGGGGGGCTGGAGGGCGGCAACAGCGGGGGCCACCCGCAGCAG
CGGGTGCACCTCAAGATTCTCCCTATCGATTTCGGCGGCCCTGTTGAACA
CGAGGCCGCGGAAAATGCTCCAGCAGAAGCAGTACCGGCACAGGATTTCT
ATGCCGGGGAAGGGGTGGGAGTGGCTCACGGTCCGGGGCTCGGGCTCGAC
GCGCCAGGAGCGAGGGGACAAGCGACTGCGGACGAAGACCTTGCGTCCGG
GGTGTCGGGGATGGACATAGGTGGCGGAGAGCGATTCGACGTCGGAGACC
ACAGCGGCAGCGGCACCAGAGTGGCGCGGGAGAGGCGGGGGGAGAGGTCC
TTCGACGTTGATGACGACGATGACGACGACGACAATGATGGACGCTTTGG
TGCGGGTGGGGGCGGTGGCAGGAGTCCCGTCGGTGGCGGGAGTAGGGGCG
AGCACGGCGACGGAGGGAGGAGAGGGGACAGGGGACGGGGGTACGGCGAC
GATGGCGATGATGACGGCCATGACCGCAGATATCGCGGGGGCGGGGGCGC
GTACGGTGACGATGACGAGGACGATACTTGGAAGGCTTCTGTGGTGAACC
AGGCTTCCCAGGGGGTCAAGGACTTTCAAAAGAAGACCTCTCAGGTGGCC
AAGACGATGGGATTCGGGGCAAAAAAGATGTGGAACGCGATCAACAAGGG
CGTCGGAGGCCCCGTGGTTCCTTCCGAAGAGGCGATGGAGAACCTCCACG
AACTGGCCAACTTCCTTGGAACCCCCTTTTCCGCCACGAGCCGGGAGCAC
GTGAACGACCTCGGGAAGGTGTGGATGTGCCTCTTCCCAGACGACGAGTT
TGAGGGCGCCGAGTCTCCGAGATGGCAGGAGGCGGGGTTTCAAGAGTCGA
ATGTGTCCCTGGACTTCCGCGGCACAGGTGTCCTGGCGCTCAAGTCAATG
GTCTTCTTCTGCCAGGAGTACGACCGAAAGGCACTATCGCTGTGCCGAGC
GCAGTCGGCAGGGGGTTCCTCCCACTACCCTTGGGCGGTAGTGGCCAACA
ACCTTACCTTGATGCTGGCTGATGTCTTGGAGATGCGGGCGAATCAGTTC
GCGTCGAGCCGGAAAGGATACTGGGGGGTGTTCGACAGGCGGGGGGCGTT
CTTCGAGATTTTCTGCATGGCCTTCAGACTACTGGATCACACCTGGGCGG
AACGAGGCGCGAAGCGGAGCAACTTTGGCCAGATCATTGGATACACGAAG
AGTGTCATTGTGGAGCTTCTGGAGAGCAACCCTCCGAACCTCCCGGCGTT
CATGGGGCAGGCGGAAGAGATGGGCATGCTGCGATGA
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Synonyms
The feature 'Ec-27_005480.1' has the following synonyms
Synonym
Esi0000_0200
Esi_0000_0200