Ec-27_005470.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-27_005470.1
Unique NameEc-27_005470.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length524
Homology
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BLAST of Ec-27_005470.1 vs. uniprot
Match: D8LB27_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB27_ECTSI)

HSP 1 Score: 719 bits (1857), Expect = 5.830e-257
Identity = 504/504 (100.00%), Postives = 504/504 (100.00%), Query Frame = 1 
Query:    1 MSTYQSKREDGRSRLDGFEIEIFKLVQEEVTSEQWKQWLQVPLEHAAARGNLDLFTRLMDAGGFGGERGWRGCNGRTLLGAAAWGKSDKVVRALLEAGAGDDVNVLFGPEGKSALHVAAARGAEEASKALMVAGADPNLFDCKGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVDTGDDQGYTAIHCAVNRHGPLDNGAVVRLLLEAGGGVNAETGRDFLRWTPLHFAVERRIASIDTTLALLEGGANTNAHGDHSGTPLHVACMHSNVAAVELLLRWGADETCSNDNGDVPADVIGVYDRGDVNDEDVKADHKRIRRMLARAPADRSWRRRGWLVLSRSCPTRVQIANKGSRVNRNSCPAKVARVSGEDLGGDEEEAENQMTVDWGGLVGSLLGLEADGLFRLVVGFL 1512
            MSTYQSKREDGRSRLDGFEIEIFKLVQEEVTSEQWKQWLQVPLEHAAARGNLDLFTRLMDAGGFGGERGWRGCNGRTLLGAAAWGKSDKVVRALLEAGAGDDVNVLFGPEGKSALHVAAARGAEEASKALMVAGADPNLFDCKGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVDTGDDQGYTAIHCAVNRHGPLDNGAVVRLLLEAGGGVNAETGRDFLRWTPLHFAVERRIASIDTTLALLEGGANTNAHGDHSGTPLHVACMHSNVAAVELLLRWGADETCSNDNGDVPADVIGVYDRGDVNDEDVKADHKRIRRMLARAPADRSWRRRGWLVLSRSCPTRVQIANKGSRVNRNSCPAKVARVSGEDLGGDEEEAENQMTVDWGGLVGSLLGLEADGLFRLVVGFL
Sbjct:    1 MSTYQSKREDGRSRLDGFEIEIFKLVQEEVTSEQWKQWLQVPLEHAAARGNLDLFTRLMDAGGFGGERGWRGCNGRTLLGAAAWGKSDKVVRALLEAGAGDDVNVLFGPEGKSALHVAAARGAEEASKALMVAGADPNLFDCKGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVDTGDDQGYTAIHCAVNRHGPLDNGAVVRLLLEAGGGVNAETGRDFLRWTPLHFAVERRIASIDTTLALLEGGANTNAHGDHSGTPLHVACMHSNVAAVELLLRWGADETCSNDNGDVPADVIGVYDRGDVNDEDVKADHKRIRRMLARAPADRSWRRRGWLVLSRSCPTRVQIANKGSRVNRNSCPAKVARVSGEDLGGDEEEAENQMTVDWGGLVGSLLGLEADGLFRLVVGFL 504
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BLAST of Ec-27_005470.1 vs. uniprot
Match: D8LQN0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN0_ECTSI)

HSP 1 Score: 377 bits (969), Expect = 2.230e-122
Identity = 321/511 (62.82%), Postives = 366/511 (71.62%), Query Frame = 1 
Query:   16 SKREDGRSRLDGFEIEIFKLVQEEVTSEQWKQWLQVPLEHAAARGNLDLFTRLMDAGGFGGERGWRGCNGRTLLGAAAWGKSDKVVRALLEAGAGDDVNVLFGPEGKSALHVAAARGAEEASKALMVAGADPNLFDCKG-----YXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVDTGDDQGYTAIHCAVNRHGPL-DNGAVVRLLLEAGGGVNAETGRDFLRWTPLHFAVERRIASIDTTLALLEGGANTNAHGDHSGTPLHVACMHSNVAAVELLLRWGADETCSNDNGDVPADVIGVYDRGDVNDEDVKADHKRIRRMLARAPADRSWRRRGWLVLSRSCPTRVQIANKGS------RVNRNSCPAKVARVSGEDLGGDEEEAENQMTVDWGGLVGSLLGLEADGLFRLVVGFL 1512
            ++ E+ RSRL GFEIEIFKL++ E T EQWK+WL+ PLEHAAA GNLDLFTRLMDAG    E GWRGC+GRTLLGAAA G+S+K++R LL AGA DDVNVLFG E +SALHVAAARGA++  +ALM+AGADPN+ D  G      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                       EVDT +D G+ A+H   +    + D G  VR+LL AG  VN +   D    TPLH AV R + S  T  ALLEGGAN NA      TPLH+AC     + VELLLRWGADE   N++GD PADV+GV ++ D++DE+ +AD++RI RMLARAPADRSWRRRGWLVLSRSCPTRV IAN  S      R+N NS  AKVARVSG+    D+EE E+QM VD   LVG L+GLEA+GLFRLVVGFL
Sbjct:    5 NREEEDRSRLVGFEIEIFKLLRREATPEQWKEWLRAPLEHAAAEGNLDLFTRLMDAGA-NTEAGWRGCHGRTLLGAAALGRSEKMIRTLLTAGATDDVNVLFGGESESALHVAAARGADDTCRALMIAGADPNVRDRVGRSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANCGLRSMCTNGSRCSPLEIAAGRGHADVLKALLDKRSSEVDTANDLGWAALHYVASFDETVRDKGDAVRVLLGAGADVNVKGTNDSCA-TPLHLAVNRWMTSTGTICALLEGGANINARTAGDDTPLHIACTRLRGSVVELLLRWGADEKLPNNDGDTPADVVGVLEQNDLDDEEREADNQRIHRMLARAPADRSWRRRGWLVLSRSCPTRVHIANGSSSSSSISRINGNS--AKVARVSGQGSSRDDEETEDQMMVDLRDLVGRLVGLEAEGLFRLVVGFL 511
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BLAST of Ec-27_005470.1 vs. uniprot
Match: D8LD22_ECTSI (MHC_I C-terminus family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD22_ECTSI)

HSP 1 Score: 369 bits (946), Expect = 1.680e-118
Identity = 354/533 (66.42%), Postives = 399/533 (74.86%), Query Frame = 1 
Query:    4 STYQSKREDGRSRLDGFEIEIFKLVQEEVTSEQWKQWLQVPLEHAAARGNLDLFTRLMDAGGFGGERGWRGCNGRTLLGAAAWGKSDKVVRALLEAGAGDDVNVLFGPEGKSALHVAAARGAEEASKALMVAGADPNLFDCKGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE-VDTGDDQGYTAIHCA--VNRHGPLDNGAVVRLLLEAGGGVNAETGRDFLRWTPLHFAVERRIASIDTTLALLEGGANTNAHGDHSGTPLHVACMHSNVAAVELLLRWGADETCSNDNGDVPADVIGVYDRGDVNDE--DVKADHKRIRRMLARAPADRSWRRRGWLVLSRSCPTRVQIANK-------GSRVNRNSCPAKVARVSGEDLGGDEEEAENQMTVDWGGLVGSLLGLEADGLFRLVVGFLIQAQEKVGAVSLSRANGS 1566
            S   S++   R+R+DGFE+EIFKLVQ E TS+QWK+WL+ PLEHAAA GNL LFTRLMDAG    E GWRGC+GRTLLGAAA  K+ K++RALL AGA  DVNVLFG + +SALH+AAARGAEEASKALM+AGA+PNL      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX             V+  D  GYTA+H A  +  HG  D G  VR+LL AG  V+A+T  D LR  PLH AV  R+ S  T  ALLEGGA+ N       TPLH AC +S+VAAVELLLRWGADE  ++D    PAD+IG    GDV  +  D++AD +RI +MLARAPADRSWRRR WLVLSRSCPTRV+IAN+       GS  + N    K+AR SGED GG E E E+QM VD  GLV  L+GLEADGLFRLVVGFL + +  V   SL + + S
Sbjct:    3 SAAASQQSQDRTRVDGFEVEIFKLVQREATSKQWKEWLRAPLEHAAASGNLGLFTRLMDAGA-SAEAGWRGCDGRTLLGAAACSKNKKILRALLTAGAKSDVNVLFGAKRESALHLAAARGAEEASKALMIAGANPNLRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTIVKAFLDTDTSLVNATDHYGYTALHHAALIEVHG-RDKGDAVRVLLAAGADVHAKTTDDHLRCAPLHIAVCGRVPSTGTIRALLEGGADVNVRDIEDRTPLHEACTYSSVAAVELLLRWGADEKLTDDGDVTPADMIGTS--GDVGSDHGDIEADGQRIHQMLARAPADRSWRRRSWLVLSRSCPTRVKIANENRSGSSVGSSSSSNGNSTKLARFSGEDSGGGERETEDQMMVDLRGLVTRLVGLEADGLFRLVVGFLKRGRNGVLFTSLPQLSDS 531
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BLAST of Ec-27_005470.1 vs. uniprot
Match: A0A6H5JHY5_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY5_9PHAE)

HSP 1 Score: 383 bits (984), Expect = 6.210e-116
Identity = 253/509 (49.71%), Postives = 298/509 (58.55%), Query Frame = 1 
Query:    1 MSTYQSKREDGRSRLDGFEIEIFKLVQEEVTSEQWKQWLQVPLEHAAARGNLDLFTRLMDAGGFGGERGWRGCNGRTLLGAAAWGKSDKVVRALLEAGAGDDVNVLFGPEGKSALHVAAARGAEEASKALMVAGADPNLFDCKGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVDTGDDQGYTAIHCAVNRHGPLDNGAVVRLLLEAGGGVNAETGRDFLRWTPLHFAVERRIASIDTTLALLEGGANTNAHGDHSGTPLHVACMHSNVAAVELLLRWGADETCSNDNGDVPADVIGVYDRGDVNDEDVKADHKRIRRMLARAPADRSWRRRGWLVLSRSCPTRVQIANKGSRVNRNSCPAKVARVSGEDLGGDEEEAENQMTVDWGGLVGSLLGLEADGLFRLVVGFLIQAQE 1527
            M+T+QSKRED RS LDGFE+EI +LV+E  TSEQW+QWL++PLEHAAA+GNLDLFTRLMDAG   GE GWRGCNGRTLLGA A+G+S+K+VRALLEAG   D NV F  EGKSALHVAAAR              DPNL  CKGY                                    XXXXXXXXXXXXXXXXX                                                                     +VDT DDQ YT +H A +      +G VV +LLEAG  VNA+T ++   +TPLH AV+RR++SI T  A            + + TPLHVAC +SN A V+LLL WGAD TCSN NG VPADVI  +D   ++DE ++ADHK +RRMLARAPAD+SWRR GWLVLSRS PTRVQI N+G   + NSC  K+ARVSG+D   D+E  ENQM VDW  L+  L+GLEADGLFRL+VGFL   +E
Sbjct:    1 MATHQSKRED-RSHLDGFEVEIVELVREGATSEQWRQWLRIPLEHAAAKGNLDLFTRLMDAGS-SGEPGWRGCNGRTLLGATAYGESEKMVRALLEAGVTYDRNVRFSAEGKSALHVAAAR--------------DPNLPACKGYHALHVAAERGHDRVISLLLLKGAHVDAKTYSGDAPLXXXXXXXXXXXXXXXXXLGGAHTDVAERHPTNSSGRWKCFWLPVPTGGRPDNGGWSSLPNAVCCGHATIVKAFLETGI--------DVDTTDDQAYTVLHRAADM-----DGCVVHVLLEAGADVNAKTDQNSFLYTPLHLAVDRRVSSIRTIRAXXXXXXXXXXXSEDNDTPLHVACTYSNAAVVKLLLCWGADGTCSNGNGHVPADVIRAHDEDGLDDEHIEADHKHVRRMLARAPADKSWRRHGWLVLSRSGPTRVQIGNRGGSGSSNSCSTKLARVSGKDSSRDDE-LENQMMVDWRVLLDRLVGLEADGLFRLMVGFLCGKEE 479
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BLAST of Ec-27_005470.1 vs. uniprot
Match: A0A6H5L812_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L812_9PHAE)

HSP 1 Score: 332 bits (852), Expect = 2.670e-105
Identity = 236/509 (46.37%), Postives = 274/509 (53.83%), Query Frame = 1 
Query:   16 SKRED-GRSRLDGFEIEIFKLVQEEVTSEQWKQWLQVPLEHAAARGNLDLFTRLMDAGGFGGERGWRGCNGRTLLGAAAWGKSDKVVRALLEAGAGDDVNVLFGPEGKSALHVAAARGAEEASKALMVAGADPNLFDCKGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVDTGDDQGYTAIHCAVNRHGPL-DNGAVVRLLLEAGGGVNAETGRDFLRWTPLHFAVERRIASIDTTLALLEGGANTNAHGDHSGTPLHVACMHSNVAAVELLLRWGADETCSNDNGDVPADVIGVYDRGDVNDEDVKADHKRIRRMLARAPADRSWRRRGWLVLSRSCPTRVQIANKGSRVNR--------NSCPAKVARVSGEDLGGDEEEAENQMTVDWGGLVGSLLGLEADGLFRLVVGFL 1512
            SKRE+  RSRLDGFEIEIFKLVQ   TSEQWK+WL+ P EHAAA GNLD FTRLMDAG   G  GWRGCNGRTLLGAAA+G+S+K+VR  L AGA DDVNVLFG E                 +ALM+ GADPN+ D +                                                    XXXXXXXXXXXX                                                            EVD  D  G+ A+H A +  GP+ DNG  VR+LL AG  V+A+  +D    T L+ AV RRIAS  T  ALLEGGAN NA      TPLHVAC  S+   VELLLRWGAD+  + + G  PA V+    + D++DE+++AD++RIRRMLAR PA RSWRRRGWLVLSRSCPTRVQIAN  S            N   AKVA+VSGE    D+EE  + M VD   LVG L+ LEADG+FRLVVGFL
Sbjct:    4 SKREEEDRSRLDGFEIEIFKLVQRGATSEQWKEWLRAPREHAAAEGNLDFFTRLMDAGANAGA-GWRGCNGRTLLGAAAFGRSEKMVRTTLTAGATDDVNVLFGGE----------------REALMIDGADPNVRDRR------------------KRSPLHLAAVAGHHRVVGMLLLNRACVHAKTASQXXXXXXXXXXXXALCISELLLGANSHLEAVQELLAAGANYSLRTNGSRSPLEIAANRGQADVVKALLDKDSGEVDATDGGGWAALHYAASIDGPVRDNGDAVRVLLRAGADVSAKGTKDPCD-TSLYLAVNRRIASDGTIRALLEGGANINARIGGDQTPLHVACSRSSAVGVELLLRWGADDKLTTNVGQTPAHVVRALQQDDLDDEELEADNQRIRRMLARDPAARSWRRRGWLVLSRSCPTRVQIANGSSXXXXXXXXXXXXNGNSAKVAKVSGESSSRDDEETADDMMVDLRDLVGRLIALEADGVFRLVVGFL 476
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BLAST of Ec-27_005470.1 vs. uniprot
Match: A0A6H5JM79_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM79_9PHAE)

HSP 1 Score: 275 bits (702), Expect = 2.070e-83
Identity = 319/501 (63.67%), Postives = 343/501 (68.46%), Query Frame = 1 
Query:   13 QSKREDGRSRLDGFEIEIFKLVQEEVTSEQWKQWLQVPLEHAAARGNLDLFTRLMDAGGFGGERGWRGCNGRTLLGAAAWGKSDKVVRALLEAGAGDDVNVLFGPEGKSALHVAAARGAEEASKALMVAGADPNLFDCKGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVDTGDDQGYTAIHCAVNRHGPL-DNGAVVRLLLEAGGGVNAETGRDFLRWTPLHFAVERRIASIDTTLALLEGGANTNAHGDHSGTPLHVACMHSNVAAVELLLRWGADETCSNDNGDVPADVIGVYDRGDVNDEDVKADHKRIRRMLARAPADRSWRRRGWLVLSRSCPTRVQIANKGSRVNRNSCPAKVARVSGEDLGGDEEEAENQMTVDWGGLVGSLLGLEADGLFRLVVGFL 1512
            ++ RED R RLDGFEIEI K VQEEVTS+QWKQWL+VPLE+AAAR NLDLFTRLMDAG                           VVRALLEAGA D+VNV+FGPE +S LH AAA GAEEASKAL VAGADP + D +GY  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          TA+H A    GP+ DNGAV                   LR  PLH AV+ R +SI T  ALLEGG N N+   ++ TPL+VAC +SN AAVELLLRWGADET SND+G +P D IG  D                           SWRRR WLVLSRSC TRV                  ARVSGED GG +EE E+QM VDW  LV  L+GLE DGLFR VVGFL
Sbjct:    6 KNTREDDRLRLDGFEIEILKFVQEEVTSDQWKQWLRVPLEYAAARENLDLFTRLMDAG---------------------------VVRALLEAGATDNVNVVFGPEDESTLHFAAAWGAEEASKALTVAGADPEMSDRRGYRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTALHGAATIDGPVHDNGAVXXXXXXXXXXXXXXXXXXLLRHPPLHLAVDARTSSIRTIRALLEGGVNINSLVTYAETPLYVACCYSNGAAVELLLRWGADETWSNDDGAIPIDAIGANDMRTT-----------------------SWRRRDWLVLSRSCSTRV------------------ARVSGEDSGGVDEETEDQMMVDWRDLVDRLIGLEVDGLFRSVVGFL 438
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BLAST of Ec-27_005470.1 vs. uniprot
Match: D7G692_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G692_ECTSI)

HSP 1 Score: 269 bits (687), Expect = 1.800e-79
Identity = 255/500 (51.00%), Postives = 309/500 (61.80%), Query Frame = 1 
Query:   43 LDGFEIEIFKLVQEEVTSEQWKQWLQVPLEHAAARGNLDLFTRLMDAGGFGGERGWRGCNGRTLLGAAAWGKSDKVVRALL-EAGAGDDVNVLFGPEGKSALHVAAARGAEEASKALMVAGADPNLFDCKG----YXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVDTGDDQGYTAIHCAVNRHGPLDNGAVVRLLLEAGGGVNAETGRDFLRWTPLHFAVERRIASIDTTLALLEGGANTNAHGDHSGTPLHVACMHSNVAAVELLLRWGADETCSNDNGDVPADVIGVYDR--------GDVNDEDVKADHKRIRRMLARAPADRSWRRRGWLVLSRSCPTRVQIANKGSRVNRNSCPAKVARVSGEDLGGDEEEAENQMTVDWGGLVGSLLGLEADGLFRLVV 1503
            LDG E+EIFKLV+E+ TS QW++WL+ PLEHAAA GN+DLFTRLMDAG   G  GWRGC+GRTLLGAAA+GK++++V  LL E GA +DVNV FG   +SALHVAA R  +  S+ L++AGADPNL D  G    +                          XXXXXXXXXXXXXXXXX                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     D+   TA+HCA     PL                      + + WTPLH  V  R++S+DT           NA  +++ TPLH AC  SN AAV+LLLRWGAD+T  +  G+  AD +G +D         G ++D+ +KAD +R R +LA AP DR WRRRGWLVL RS PT+VQI    S  +     AK ARVS ED G   +E  ++  ++ G LVG ++GL+AD +FR+VV
Sbjct:   65 LDGLEVEIFKLVREQATSMQWREWLRAPLEHAAAEGNIDLFTRLMDAGA-DGSAGWRGCHGRTLLGAAAYGKNEEIVERLLAEDGATEDVNVCFGDRLESALHVAAGRDDQHLSRVLLIAGADPNLLDDVGRSPLHVAAEKGHHRVLGFLLRKGRADANKTTXXXXXXXXXXXXXXXXXTSCVSKLLLYGADTDCGDRFENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAWNDEDWATALHCAAQGSRPLLEXXXXXXXXXXXXXXXXXXXXECV-WTPLHRGVYSRLSSLDTXXXXXXXXXXXNAQAENTWTPLHYACYKSNAAAVDLLLRWGADDTIVDGEGETAADEVGTWDPEVHSNEDDGSIDDDKLKADGQRTRLILACAPVDRLWRRRGWLVLCRSYPTKVQILKDSSSSSSGCSTAKAARVSEEDSGECGDEDGDEARIELGRLVGHIVGLQADVVFRMVV 562
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BLAST of Ec-27_005470.1 vs. uniprot
Match: A0A6H5L7E1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7E1_9PHAE)

HSP 1 Score: 259 bits (662), Expect = 1.370e-73
Identity = 197/514 (38.33%), Postives = 237/514 (46.11%), Query Frame = 1 
Query:    1 MSTYQSKREDGRSRLDGFEIEIFKLVQEEVTSEQWKQWLQVPLEHAAARGNLDLFTRLMDAGGFGGERGWRGCNGRTLLGAAAWGKSDKVVRALLEAGAGDDVNVLFGPEGKSALHVAAARGAEEASKALMVAGADPNLFDCKGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVDTGDDQGYTAIHCAVNRHGPL-DNGAVVRLLLEAGGGVNAETGRDFLRWTPLHFAVERRIASIDTTLALLEGGANTNAHGDHSGTPLHVACMHSNVAAVELLLRWGADETCSNDNGDVPADVIGVYDRGDVNDEDVKADHKRIRRMLARAPADRSWRRRGWLVLSRSCPTRVQIANKGS-------------RVNRNSCPAKVARVSGEDLGGDEEEAENQMTVDWGGLVGSLLGLEADGLFRLV 1500
            MS  + + ED RSR+DGF+IEIFKLVQ E TSEQWK+WL+ PLEHAAA+    L T          +  W                S+K+VR LL AGA DD NVLFG E +SALHV  ARGAE++ +ALM+AGADP L D +G                                                                                                                           + +         I  A++  GP+ DNG  VR LL  G  VNA+T  D +  +PLH AV+RRIAS                       PLH+AC HS+V  VELLLRWGADE  +N  G  PADVI    +GD++D++ +AD +RI RM+A  PADRSWRRRGWLVLSRSCPTRVQIAN  S             R+N N+  AKVARVSGE    D+E  E  M VD   LVG L+GLEADGL RLV
Sbjct:    1 MSASKREEED-RSRVDGFKIEIFKLVQREATSEQWKEWLRAPLEHAAAKELGSLHTA---------DGHW----------------SEKMVRTLLTAGATDDANVLFGVEHESALHVVLARGAEDSCRALMIAGADPTLRD-RGDDTRWFKEMDTRIFNMTSVIERIWVAAVAGHHRVIGSLLLNRADVHAKTASQSTPLHLAASEGRALCLSELLLGANNHLEAVQELLAAGANCGLRCMLTNGSHSSLDMAAGRGHADVLTALLDKDN---------IFFAMSVDGPVHDNGDAVRALLGVGADVNAKT-TDSICASPLHLAVDRRIASDGMIXXXXXXXXXXXXXXGDDNKPLHLACRHSSVHGVELLLRWGADEKLTNSVGKTPADVIRALQQGDLDDKEREADDQRIGRMVALVPADRSWRRRGWLVLSRSCPTRVQIANGSSXXXXXXXXXXXXXRINGNA--AKVARVSGESSSRDDERTEGDMIVDLRNLVGRLVGLEADGLLRLV 475
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BLAST of Ec-27_005470.1 vs. uniprot
Match: A0A6H5JXF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXF0_9PHAE)

HSP 1 Score: 231 bits (590), Expect = 5.700e-69
Identity = 134/239 (56.07%), Postives = 166/239 (69.46%), Query Frame = 1 
Query:  802 EVDTGDDQGYTAIHCAVNRHGPL-DNGAVVRLLLEAGGGVNAETGRDFLRWTPLHFAVERRIASIDTTLALLEGGANTNAHGDHSGTPLHVACMHSNVAAVELLLRWGADETCSNDNGDVPADVIGVYDRGDVNDEDVKADHKRIRRMLARAPADRSWRRRGWLVLSRSCPTRVQIAN-KGSRVNRNSCPAKVARVSGEDLGGDEEEAENQMTVDWGGLVGSLLGLEADGLFRLVVGFL 1512
            +V+  +D G  A+H A +  GP+ D G  VR+LL AG  VN  T  D   +TPLH AV+ RIAS  T  ALLEG A+ ++   H  TPLH+AC H++V+ VELLLRWGADE  +N+ GD+PADVI    +GD++DE+  AD++RI RML RAPADRSWRRRGWLVLSR CPTRVQI N   SR + N   AKVA +SGED G  +EE E+++  D   LV  L+GLEAD LFRLVV FL
Sbjct:   34 DVNATNDLGLAALHYAASVVGPVHDKGDAVRVLLGAGVDVNVNTTTDSC-FTPLHVAVDGRIASDGTIRALLEG-ADVDSRARHDQTPLHIACKHASVSGVELLLRWGADEQLTNNRGDMPADVIRARQQGDLDDEEHDADNQRICRMLTRAPADRSWRRRGWLVLSRYCPTRVQIDNGSSSRGSYNGNSAKVATLSGEDTGRGDEETEDRIMADLRDLVDWLVGLEADSLFRLVVAFL 270
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BLAST of Ec-27_005470.1 vs. uniprot
Match: A0A6H5K6K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6K9_9PHAE)

HSP 1 Score: 228 bits (582), Expect = 7.980e-68
Identity = 140/257 (54.47%), Postives = 167/257 (64.98%), Query Frame = 1 
Query:  802 EVDTGDDQGYTAIHCAV-NRHGP-LDNGAVVRLLLEAGGGVNAETGRDFLRWTPLHFAVERRIASIDTTLALLEGGANTNAHGDHSGTPLHVACMHSNVAAVELLLRWGADETCSNDNGDVPADVI---------GVYDRGDVN---DEDVKADHKRIRRMLARAPADRSWRRRGWLVLSRSCPTRVQIANKGSRVNRNS------CPAKVARVSGEDLGGDEEEAENQMTVDWGGLVGSLLGLEADGLFRLVVGFL 1512
            EV   DD GYTA+HC V + + P LDNG  VR+LLEAG  V+A+T  D    TPLH+AV RRIA I    ALLEGGAN NA      TPLHVAC  S+V  VE LL WGADE  ++ +G+ PA  I          V D    N   DE ++AD  RIR+MLARAPADRSW RR WLVLSRSCPT+VQI+N  S  N +S        A++  V+ +DLGGD++E E+Q TV+W  LV  L+GLEAD LFRLVVGFL
Sbjct:   11 EVHATDDGGYTALHCCVCDINEPVLDNGDTVRVLLEAGADVDAKTTGDGNCATPLHYAVNRRIAPIGAIRALLEGGANVNARDVFDQTPLHVACARSSVNGVEFLLHWGADEKLTDLDGETPAGAIVDSEEETPPDVTDAPGENRGKDEAIEADQHRIRQMLARAPADRSWHRRRWLVLSRSCPTKVQISNTSSSSNISSGSSGDGLSAEMVSVNCKDLGGDDKETEDQKTVNWRDLVVRLVGLEADVLFRLVVGFL 267
The following BLAST results are available for this feature:
BLAST of Ec-27_005470.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LB27_ECTSI5.830e-257100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LQN0_ECTSI2.230e-12262.82Ankyrin repeat protein n=2 Tax=Ectocarpus siliculo... [more]
D8LD22_ECTSI1.680e-11866.42MHC_I C-terminus family protein n=1 Tax=Ectocarpus... [more]
A0A6H5JHY5_9PHAE6.210e-11649.71Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5L812_9PHAE2.670e-10546.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JM79_9PHAE2.070e-8363.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G692_ECTSI1.800e-7951.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L7E1_9PHAE1.370e-7338.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JXF0_9PHAE5.700e-6956.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K6K9_9PHAE7.980e-6854.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_27contigchr_27:4939967..4942370 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score720.3
Seed ortholog evalue6.5e-205
Seed eggNOG ortholog2880.D8LB27
Length1572
KEGG koko:K21440
Hectar predicted targeting categoryother localisation
Gene idEc-27_005470.1
GOsGO:0001508,GO:0002027,GO:0002262,GO:0002376,GO:0002520,GO:0003008,GO:0003012,GO:0003013,GO:0003015,GO:0003205,GO:0003230,GO:0003279,GO:0003283,GO:0003674,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005829,GO:0005856,GO:0005886,GO:0005911,GO:0005938,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006887,GO:0006888,GO:0006928,GO:0006936,GO:0006937,GO:0006941,GO:0006942,GO:0006996,GO:0007009,GO:0007010,GO:0007154,GO:0007163,GO:0007165,GO:0007267,GO:0007275,GO:0007507,GO:0008015,GO:0008016,GO:0008092,GO:0008093,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009893,GO:0009987,GO:0010256,GO:0010468,GO:0010522,GO:0010604,GO:0010628,GO:0010638,GO:0010646,GO:0010880,GO:0010881,GO:0010882,GO:0010959,GO:0012505,GO:0014704,GO:0014731,GO:0015672,GO:0016020,GO:0016043,GO:0016192,GO:0016323,GO:0016528,GO:0016529,GO:0018130,GO:0019222,GO:0019438,GO:0019722,GO:0019725,GO:0019899,GO:0019900,GO:0019901,GO:0019932,GO:0022898,GO:0023051,GO:0023052,GO:0030001,GO:0030003,GO:0030011,GO:0030016,GO:0030017,GO:0030018,GO:0030029,GO:0030048,GO:0030054,GO:0030097,GO:0030099,GO:0030154,GO:0030218,GO:0030315,GO:0030424,GO:0030507,GO:0030673,GO:0030674,GO:0030863,GO:0031252,GO:0031253,GO:0031256,GO:0031430,GO:0031647,GO:0031672,GO:0031674,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032501,GO:0032502,GO:0032589,GO:0032879,GO:0032940,GO:0032970,GO:0033013,GO:0033014,GO:0033036,GO:0033043,GO:0033267,GO:0033292,GO:0033365,GO:0034101,GO:0034394,GO:0034613,GO:0034641,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035088,GO:0035090,GO:0035556,GO:0035637,GO:0036309,GO:0036371,GO:0042383,GO:0042391,GO:0042592,GO:0042692,GO:0042995,GO:0043005,GO:0043034,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043266,GO:0043268,GO:0043269,GO:0043270,GO:0043292,GO:0044057,GO:0044093,GO:0044237,GO:0044249,GO:0044271,GO:0044291,GO:0044304,GO:0044325,GO:0044422,GO:0044424,GO:0044425,GO:0044444,GO:0044448,GO:0044449,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045197,GO:0045199,GO:0045202,GO:0045211,GO:0046483,GO:0046903,GO:0046907,GO:0048193,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048731,GO:0048821,GO:0048856,GO:0048869,GO:0048872,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050821,GO:0050896,GO:0051049,GO:0051050,GO:0051117,GO:0051128,GO:0051130,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051239,GO:0051270,GO:0051279,GO:0051282,GO:0051641,GO:0051649,GO:0051716,GO:0051899,GO:0051924,GO:0051928,GO:0055001,GO:0055065,GO:0055072,GO:0055074,GO:0055076,GO:0055080,GO:0055082,GO:0055117,GO:0060047,GO:0060048,GO:0060090,GO:0060255,GO:0060306,GO:0060307,GO:0060341,GO:0061024,GO:0061061,GO:0061245,GO:0061337,GO:0061515,GO:0065007,GO:0065008,GO:0065009,GO:0070252,GO:0070296,GO:0070727,GO:0070838,GO:0070972,GO:0071704,GO:0071840,GO:0071944,GO:0072359,GO:0072503,GO:0072507,GO:0072511,GO:0072657,GO:0072659,GO:0086001,GO:0086002,GO:0086003,GO:0086004,GO:0086005,GO:0086010,GO:0086012,GO:0086014,GO:0086015,GO:0086018,GO:0086019,GO:0086026,GO:0086046,GO:0086065,GO:0086066,GO:0086070,GO:0086091,GO:0090257,GO:0097060,GO:0097458,GO:0098590,GO:0098771,GO:0098794,GO:0098900,GO:0098901,GO:0098907,GO:0098910,GO:0099080,GO:0099081,GO:0099512,GO:0099568,GO:0099623,GO:0120025,GO:0120038,GO:1901016,GO:1901018,GO:1901019,GO:1901021,GO:1901360,GO:1901362,GO:1901379,GO:1901381,GO:1901564,GO:1901566,GO:1901576,GO:1903115,GO:1903169,GO:1903522,GO:1903779,GO:1904062,GO:1904064,GO:1904427,GO:1990778,GO:2001257,GO:2001259
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-27_005470Ec-27_005470Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_27 4939967..4942370 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_005470.1.2Ec-27_005470.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 4939967..4940027 -
Ec-27_005470.1.1Ec-27_005470.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 4940860..4942370 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_005470.1CDS:Ec-27_005470.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_27 4939967..4940027 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_005470.1Ec-27_005470.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_27 4939967..4942370 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-27_005470.1 ID=Ec-27_005470.1|Name=Ec-27_005470.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=524bp
MSTYQSKREDGRSRLDGFEIEIFKLVQEEVTSEQWKQWLQVPLEHAAARG
NLDLFTRLMDAGGFGGERGWRGCNGRTLLGAAAWGKSDKVVRALLEAGAG
DDVNVLFGPEGKSALHVAAARGAEEASKALMVAGADPNLFDCKGYRPLHV
AAKTGHDRVISLLLLKGAHVDGKTSSGETPLHLAASKGHALCISELLLGG
ADKDVADFGDQTPLYKAANYNHLRIFKQLLSAGADRCRTNVNGWSPLEVA
AHLGHTTIVKAFLETGSEVDTGDDQGYTAIHCAVNRHGPLDNGAVVRLLL
EAGGGVNAETGRDFLRWTPLHFAVERRIASIDTTLALLEGGANTNAHGDH
SGTPLHVACMHSNVAAVELLLRWGADETCSNDNGDVPADVIGVYDRGDVN
DEDVKADHKRIRRMLARAPADRSWRRRGWLVLSRSCPTRVQIANKGSRVN
RNSCPAKVARVSGEDLGGDEEEAENQMTVDWGGLVGSLLGLEADGLFRLV
VGFLIQAQEKVGAVSLSRANGSR*
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spliced messenger RNA

>Ec-27_005470.1 ID=Ec-27_005470.1|Name=Ec-27_005470.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1572bp|location=Sequence derived from alignment at chr_27:4939967..4942370- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGTCAACTTATCAGTCAAAGCGCGAAGATGGCCGCTCACGGCTTGACGG
CTTCGAGATCGAGATCTTCAAACTCGTGCAGGAGGAGGTGACTTCAGAGC
AATGGAAGCAGTGGCTTCAAGTACCTCTGGAGCATGCCGCGGCTAGAGGA
AACTTGGATCTCTTCACACGACTGATGGACGCTGGTGGTTTTGGCGGGGA
ACGAGGCTGGCGGGGATGCAATGGACGAACGCTGCTGGGTGCGGCTGCAT
GGGGCAAAAGCGACAAGGTGGTCCGGGCGTTGCTCGAAGCTGGGGCGGGG
GATGATGTAAACGTCCTGTTCGGACCTGAAGGCAAGTCCGCTCTCCACGT
TGCGGCAGCACGGGGTGCAGAGGAGGCCTCCAAGGCCCTCATGGTGGCTG
GAGCAGACCCGAATTTGTTTGATTGCAAAGGATACCGTCCGCTCCACGTC
GCTGCCAAAACGGGGCACGACCGAGTTATCAGCCTCCTTCTCCTGAAAGG
AGCCCACGTAGACGGGAAGACATCTTCGGGAGAGACTCCTCTCCACCTCG
CTGCTTCCAAGGGCCATGCGCTATGCATCTCTGAGCTTTTGCTGGGAGGC
GCAGACAAGGACGTGGCCGATTTTGGAGACCAAACGCCACTATACAAGGC
AGCAAACTACAACCACCTCCGGATTTTTAAACAGCTTTTGTCTGCGGGTG
CCGACCGTTGCCGTACCAACGTCAACGGCTGGTCTCCACTGGAGGTGGCT
GCACACCTAGGACACACGACCATCGTGAAAGCCTTCCTTGAAACGGGAAG
TGAAGTCGACACAGGTGATGATCAAGGATACACAGCTATACACTGTGCTG
TTAATAGACATGGGCCTCTGGACAACGGCGCCGTTGTCCGTTTACTGTTG
GAAGCTGGGGGTGGTGTCAACGCAGAGACCGGCAGAGATTTTCTCCGATG
GACGCCGCTCCATTTTGCCGTAGAACGTCGGATAGCATCGATCGACACGA
CGCTCGCCCTGTTAGAGGGAGGGGCCAACACCAATGCGCACGGTGACCAC
AGCGGGACGCCACTGCACGTAGCCTGCATGCACTCCAACGTGGCGGCTGT
GGAGCTGCTGCTGCGTTGGGGGGCAGATGAGACTTGTTCGAATGACAACG
GAGACGTCCCAGCAGACGTGATAGGAGTGTACGATCGGGGCGACGTCAAT
GACGAAGACGTCAAGGCCGACCACAAGCGCATTCGTCGAATGCTGGCACG
TGCTCCAGCCGACCGGTCATGGCGTCGCCGCGGTTGGCTGGTGCTGAGCC
GTTCCTGCCCAACAAGGGTGCAAATAGCAAACAAAGGCAGCAGGGTCAAT
CGCAACAGTTGCCCCGCCAAGGTGGCAAGGGTTAGCGGCGAGGATTTGGG
TGGGGATGAGGAGGAGGCGGAAAACCAGATGACGGTCGACTGGGGAGGTT
TGGTGGGAAGCCTGCTCGGACTGGAGGCTGACGGGTTGTTCCGGTTGGTG
GTGGGCTTTCTGATTCAAGCACAGGAAAAGGTTGGAGCGGTGTCCCTTTC
TCGAGCCAACGGTAGCCGGTAG
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protein sequence of Ec-27_005470.1

>Ec-27_005470.1 ID=Ec-27_005470.1|Name=Ec-27_005470.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=524bp
MSTYQSKREDGRSRLDGFEIEIFKLVQEEVTSEQWKQWLQVPLEHAAARG
NLDLFTRLMDAGGFGGERGWRGCNGRTLLGAAAWGKSDKVVRALLEAGAG
DDVNVLFGPEGKSALHVAAARGAEEASKALMVAGADPNLFDCKGYRPLHV
AAKTGHDRVISLLLLKGAHVDGKTSSGETPLHLAASKGHALCISELLLGG
ADKDVADFGDQTPLYKAANYNHLRIFKQLLSAGADRCRTNVNGWSPLEVA
AHLGHTTIVKAFLETGSEVDTGDDQGYTAIHCAVNRHGPLDNGAVVRLLL
EAGGGVNAETGRDFLRWTPLHFAVERRIASIDTTLALLEGGANTNAHGDH
SGTPLHVACMHSNVAAVELLLRWGADETCSNDNGDVPADVIGVYDRGDVN
DEDVKADHKRIRRMLARAPADRSWRRRGWLVLSRSCPTRVQIANKGSRVN
RNSCPAKVARVSGEDLGGDEEEAENQMTVDWGGLVGSLLGLEADGLFRLV
VGFLIQAQEKVGAVSLSRANGSR*
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mRNA from alignment at chr_27:4939967..4942370-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-27_005470.1 ID=Ec-27_005470.1|Name=Ec-27_005470.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=2404bp|location=Sequence derived from alignment at chr_27:4939967..4942370- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGTCAACTTATCAGTCAAAGCGCGAAGATGGCCGCTCACGGCTTGACGG
CTTCGAGATCGAGATCTTCAAACTCGTGCAGGAGGAGGTGACTTCAGAGC
AATGGAAGCAGTGGCTTCAAGTACCTCTGGAGCATGCCGCGGCTAGAGGA
AACTTGGATCTCTTCACACGACTGATGGACGCTGGTGGTTTTGGCGGGGA
ACGAGGCTGGCGGGGATGCAATGGACGAACGCTGCTGGGTGCGGCTGCAT
GGGGCAAAAGCGACAAGGTGGTCCGGGCGTTGCTCGAAGCTGGGGCGGGG
GATGATGTAAACGTCCTGTTCGGACCTGAAGGCAAGTCCGCTCTCCACGT
TGCGGCAGCACGGGGTGCAGAGGAGGCCTCCAAGGCCCTCATGGTGGCTG
GAGCAGACCCGAATTTGTTTGATTGCAAAGGATACCGTCCGCTCCACGTC
GCTGCCAAAACGGGGCACGACCGAGTTATCAGCCTCCTTCTCCTGAAAGG
AGCCCACGTAGACGGGAAGACATCTTCGGGAGAGACTCCTCTCCACCTCG
CTGCTTCCAAGGGCCATGCGCTATGCATCTCTGAGCTTTTGCTGGGAGGC
GCAGACAAGGACGTGGCCGATTTTGGAGACCAAACGCCACTATACAAGGC
AGCAAACTACAACCACCTCCGGATTTTTAAACAGCTTTTGTCTGCGGGTG
CCGACCGTTGCCGTACCAACGTCAACGGCTGGTCTCCACTGGAGGTGGCT
GCACACCTAGGACACACGACCATCGTGAAAGCCTTCCTTGAAACGGGAAG
TGAAGTCGACACAGGTGATGATCAAGGATACACAGCTATACACTGTGCTG
TTAATAGACATGGGCCTCTGGACAACGGCGCCGTTGTCCGTTTACTGTTG
GAAGCTGGGGGTGGTGTCAACGCAGAGACCGGCAGAGATTTTCTCCGATG
GACGCCGCTCCATTTTGCCGTAGAACGTCGGATAGCATCGATCGACACGA
CGCTCGCCCTGTTAGAGGGAGGGGCCAACACCAATGCGCACGGTGACCAC
AGCGGGACGCCACTGCACGTAGCCTGCATGCACTCCAACGTGGCGGCTGT
GGAGCTGCTGCTGCGTTGGGGGGCAGATGAGACTTGTTCGAATGACAACG
GAGACGTCCCAGCAGACGTGATAGGAGTGTACGATCGGGGCGACGTCAAT
GACGAAGACGTCAAGGCCGACCACAAGCGCATTCGTCGAATGCTGGCACG
TGCTCCAGCCGACCGGTCATGGCGTCGCCGCGGTTGGCTGGTGCTGAGCC
GTTCCTGCCCAACAAGGGTGCAAATAGCAAACAAAGGCAGCAGGGTCAAT
CGCAACAGTTGCCCCGCCAAGGTGGCAAGGGTTAGCGGCGAGGATTTGGG
TGGGGATGAGGAGGAGGCGGAAAACCAGATGACGGTCGACTGGGGAGGTT
TGGTGGGAAGCCTGCTCGGACTGGAGGCTGACGGGTTGTTCCGGTTGGTG
GTGGGCTTTCTGTGAGGTACGAAGGAGGGGAAATCGTTGCCTTCGAGTAG
TGGTGATTTCGTTGCCATCGAAGCAAAGATGGACGACGTGCTCTCGTGAG
TGTTACCGGGCACGAGCACGGGACTTTGAAAATATGTATTTCTCGATATC
TTCGTATCACCACTTCCGTGGTCGTGGCATACGGGCGTTTGATGGATTTG
GCCCGATTTCTTTGCTCCACATATGATGCAACCCTGCGAAACGTTTTGCG
TAGCGGATGTGGGAAAAGTTTCGAATACCATGTACTTGAAACAATCGTGC
CGGGGTGCGAAGCGAACGGGTCTTCGAACGGGGCCGGCCGAACAAGAAGA
ATCTCTATTTTAGTGTCACGATCGATCATTTGTTGGTTGCCTGCTGCAAT
TCTGTTTCGCCTGTAACTGGAGCGAGAGCCAGGTATTTGTAATGCTGTGC
CCTCGTCTTGGTTTCTGCAGTGGGCGGTCGTGTCGTCTTGGCGGTTGTCG
AACAGCCTGCAAGAAAACTATTGTGCTCGTGCCGTAGCTGGTCCTGCCGT
TCAGGAGGCTAGCGAATACGCCAAGTCAACTTCCTGCACAAACTTGTTGT
CCTATGCGCACCAGCGGCCGCGCAGTCCATGGCTTGTCTAGTACGCGATA
TACATCGTTTCGGATTGCATCACTTTCTTCTCTACCTTTAGATTCTCCTC
ACGACTTGAGCTACTGCCAATGGGCATGTAGGTCCCTCTGATAAGATGGA
ACGATCCACATATTGCTGCGCATATGTGCGGAATAACCAAGCACTACCTT
CTCCTGCCCCTCCGCCCCGTCCCCCATGACCACCGCTTCGTAGGATTCAA
GCACAGGAAAAGGTTGGAGCGGTGTCCCTTTCTCGAGCCAACGGTAGCCG
GTAG
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Coding sequence (CDS) from alignment at chr_27:4939967..4942370-

>Ec-27_005470.1 ID=Ec-27_005470.1|Name=Ec-27_005470.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1572bp|location=Sequence derived from alignment at chr_27:4939967..4942370- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGTCAACTTATCAGTCAAAGCGCGAAGATGGCCGCTCACGGCTTGACGG
CTTCGAGATCGAGATCTTCAAACTCGTGCAGGAGGAGGTGACTTCAGAGC
AATGGAAGCAGTGGCTTCAAGTACCTCTGGAGCATGCCGCGGCTAGAGGA
AACTTGGATCTCTTCACACGACTGATGGACGCTGGTGGTTTTGGCGGGGA
ACGAGGCTGGCGGGGATGCAATGGACGAACGCTGCTGGGTGCGGCTGCAT
GGGGCAAAAGCGACAAGGTGGTCCGGGCGTTGCTCGAAGCTGGGGCGGGG
GATGATGTAAACGTCCTGTTCGGACCTGAAGGCAAGTCCGCTCTCCACGT
TGCGGCAGCACGGGGTGCAGAGGAGGCCTCCAAGGCCCTCATGGTGGCTG
GAGCAGACCCGAATTTGTTTGATTGCAAAGGATACCGTCCGCTCCACGTC
GCTGCCAAAACGGGGCACGACCGAGTTATCAGCCTCCTTCTCCTGAAAGG
AGCCCACGTAGACGGGAAGACATCTTCGGGAGAGACTCCTCTCCACCTCG
CTGCTTCCAAGGGCCATGCGCTATGCATCTCTGAGCTTTTGCTGGGAGGC
GCAGACAAGGACGTGGCCGATTTTGGAGACCAAACGCCACTATACAAGGC
AGCAAACTACAACCACCTCCGGATTTTTAAACAGCTTTTGTCTGCGGGTG
CCGACCGTTGCCGTACCAACGTCAACGGCTGGTCTCCACTGGAGGTGGCT
GCACACCTAGGACACACGACCATCGTGAAAGCCTTCCTTGAAACGGGAAG
TGAAGTCGACACAGGTGATGATCAAGGATACACAGCTATACACTGTGCTG
TTAATAGACATGGGCCTCTGGACAACGGCGCCGTTGTCCGTTTACTGTTG
GAAGCTGGGGGTGGTGTCAACGCAGAGACCGGCAGAGATTTTCTCCGATG
GACGCCGCTCCATTTTGCCGTAGAACGTCGGATAGCATCGATCGACACGA
CGCTCGCCCTGTTAGAGGGAGGGGCCAACACCAATGCGCACGGTGACCAC
AGCGGGACGCCACTGCACGTAGCCTGCATGCACTCCAACGTGGCGGCTGT
GGAGCTGCTGCTGCGTTGGGGGGCAGATGAGACTTGTTCGAATGACAACG
GAGACGTCCCAGCAGACGTGATAGGAGTGTACGATCGGGGCGACGTCAAT
GACGAAGACGTCAAGGCCGACCACAAGCGCATTCGTCGAATGCTGGCACG
TGCTCCAGCCGACCGGTCATGGCGTCGCCGCGGTTGGCTGGTGCTGAGCC
GTTCCTGCCCAACAAGGGTGCAAATAGCAAACAAAGGCAGCAGGGTCAAT
CGCAACAGTTGCCCCGCCAAGGTGGCAAGGGTTAGCGGCGAGGATTTGGG
TGGGGATGAGGAGGAGGCGGAAAACCAGATGACGGTCGACTGGGGAGGTT
TGGTGGGAAGCCTGCTCGGACTGGAGGCTGACGGGTTGTTCCGGTTGGTG
GTGGGCTTTCTGATTCAAGCACAGGAAAAGGTTGGAGCGGTGTCCCTTTC
TCGAGCCAACGGTAGCCGGTAG
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Synonyms
The feature 'Ec-27_005470.1' has the following synonyms
Synonym
Esi0000_0201
Esi_0000_0201