|
Homology
BLAST of Ec-27_005160.1 vs. uniprot
Match: D8LB54_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB54_ECTSI) HSP 1 Score: 1625 bits (4209), Expect = 0.000e+0 Identity = 943/1004 (93.92%), Postives = 943/1004 (93.92%), Query Frame = 1
Query: 1 MEAIGLSTQDTFYVDPRVEGCDSLSSRAQRLGFKTRGFLGEGVTICVAASTTPSAGDGGASEGAATPGAAGGVGQSRGQRLSRIHRMVTQAQTESSARPGQQAHTSIVDQARQLRAAVVTGQTFRLWLGRQESKRGAGKGEGGRVTVAAGAAVAGEGKKAADRPLISRRGGGQQRAAGASRFKSREHPRVVIKDLDGLEPDRVQAFPPELLRKCFLLTDAPPGICPFTPREQWDREVLKVKKKDAQCVGAKVAARMPPAGSQKPRRGGWCECCEIQYIGTMSEHCASDRHTAAVEADPNFAALLAFESWTGAEGDSSVVSDTAPGRTAAYPTPKAEVAGRDSTAVSPALPGPATKEGHEEGGGEEPLLPPVAGSEAPQGCGEHNDQNPIALGTGSPPSGRRQGSAVSSSREGEREAPTAKKEDSVLEGGAISPSGLREATGGXXXXXXXXXCARASRGSPRLRPKLEQPSGVALCSSEPGAPGECRQAPPRFMRGTCPPNGDSRKDHRRPGSPVADTPATSVASVPSSLADCRSKQDSSSKSSVCPAESPEHDVQGPDELPPLSASSSPTXXXXXXXXXXXXXXXXXXXENSSSVVGGASSSSPDAARRMDLRVRRGGTGGVPEAPGSSRSPPKRGDDKPDTDPQQQRLTRPAPPREIGTAPSPPSATTSEQEQIDERKKEKRQKRALALLEASAGWVASVRGAAGPCPGDRAARSLATTSGGRSCRKVAKASPPSXXXXTAAQSQRVSKEKSPREDVGXXXXXXSPSTGRTTGPSRENEEGQQQCGAARSGVAVETGSNAEARDGCGGSAGTSARQXXXXXXXXXXXSPAEDAHGRERLPKRARLLPDNGHGYGEEVENIAPSNIAPSSGRTPPSVETNSGGTSSSGRNRCSARQAQASSTASRMGLETAAAGQHSSPASSERTRSISRRLGSKFAENQTGSSNAASTARTKRAAVGASSNIEPPTSKRARANATRPCTRSELPRPTRRKCLSSPGSFLTEFS 3012
MEAIGLSTQDTFYVDPRVEGCDSLSSRAQRLGFKTRGFLGEGVTICVAASTTPSAGDGGASEGAATPGAAGGVGQSRGQRLSRIHRMVTQAQTESSARPGQQAHTSIVDQARQLRAAVVTGQTFRLWLGRQESKRGAGKGEGGRVTVAAGAAVAGEGKKAADRPLISRRGGGQQRAAGASRFKSREHPRVVIKDLDGLEPDRVQAFPPELLRKCFLLTDAPPGICPFTPREQWDREVLKVKKKDAQCVGAKVAARMPPAGSQKPRRGGWCECCEIQYIGTMSEHCASDRHTAAVEADPNFAALLAFESWTGAEGDSSVVSDTAPGRTAAYPTPKAEVAGRDSTAVSPALPGPATKEGHEEGGGEEPLLPPVAGSEAPQGCGEHNDQNPIALGTGSPPSGRRQGSAVSSSREGEREAPTAKKEDSVLEGGAISPSGLREATGGXXXXXXXXXCARASRGSPRLRPKLEQPSGVALCSSEPGAPGECRQAPPRFMRGTCPPNGDSRKDHRRPGSPVADTPATSVASVPSSLADCRSKQDSSSKSSVCPAESPEHDVQGPDELPPLSASSSPTXXXXXXXXXXXXXXXXXXXENSSSVVGGASSSSPDAARRMDLR IDERKKEKRQKRALALLEASAGWVASVRGAAGPCPGDRAARSLATTSGGRSCRKVAKASPPSXXXXTAAQSQRVSKEKSPREDVGXXXXXXSPSTGRTTGPSRENEEGQQQCGAARSGVAVETGSNAEARDGCGGSAGTSARQXXXXXXXXXXXSPAEDAHGRERLPKRARLLPDNGHGYGEEVENIAPSNIAPSSGRTPPSVETNSGGTSSSGRNRCSARQAQASSTASRMGLETAAAGQHSSPASSERTRSISRRLGSKFAENQTGSSNAASTARTKRAAVGASSNIEPPTSKRARANATRPCTRSELPRPTRRKCLSSPGSFLTEFS
Sbjct: 1 MEAIGLSTQDTFYVDPRVEGCDSLSSRAQRLGFKTRGFLGEGVTICVAASTTPSAGDGGASEGAATPGAAGGVGQSRGQRLSRIHRMVTQAQTESSARPGQQAHTSIVDQARQLRAAVVTGQTFRLWLGRQESKRGAGKGEGGRVTVAAGAAVAGEGKKAADRPLISRRGGGQQRAAGASRFKSREHPRVVIKDLDGLEPDRVQAFPPELLRKCFLLTDAPPGICPFTPREQWDREVLKVKKKDAQCVGAKVAARMPPAGSQKPRRGGWCECCEIQYIGTMSEHCASDRHTAAVEADPNFAALLAFESWTGAEGDSSVVSDTAPGRTAAYPTPKAEVAGRDSTAVSPALPGPATKEGHEEGGGEEPLLPPVAGSEAPQGCGEHNDQNPIALGTGSPPSGRRQGSAVSSSREGEREAPTAKKEDSVLEGGAISPSGLREATGGXXXXXXXXXCARASRGSPRLRPKLEQPSGVALCSSEPGAPGECRQAPPRFMRGTCPPNGDSRKDHRRPGSPVADTPATSVASVPSSLADCRSKQDSSSKSSVCPAESPEHDVQGPDELPPLSASSSPTXXXXXXXXXXXXXXXXXXXENSSSVVGGASSSSPDAARRMDLR-------------------------------------------------------------IDERKKEKRQKRALALLEASAGWVASVRGAAGPCPGDRAARSLATTSGGRSCRKVAKASPPSXXXXTAAQSQRVSKEKSPREDVGXXXXXXSPSTGRTTGPSRENEEGQQQCGAARSGVAVETGSNAEARDGCGGSAGTSARQXXXXXXXXXXXSPAEDAHGRERLPKRARLLPDNGHGYGEEVENIAPSNIAPSSGRTPPSVETNSGGTSSSGRNRCSARQAQASSTASRMGLETAAAGQHSSPASSERTRSISRRLGSKFAENQTGSSNAASTARTKRAAVGASSNIEPPTSKRARANATRPCTRSELPRPTRRKCLSSPGSFLTEFS 943
BLAST of Ec-27_005160.1 vs. uniprot
Match: A0A6H5K9H1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9H1_9PHAE) HSP 1 Score: 1402 bits (3630), Expect = 0.000e+0 Identity = 847/1031 (82.15%), Postives = 874/1031 (84.77%), Query Frame = 1
Query: 28 DTFYVDPRVEGCDSLSSRAQRLGFKTRGFLGEGVTICVAASTTPSAGDGGASEGAATP--GAAGGVGQSRGQRLSRIHRMVTQAQTESSARPGQQAHTSIVDQARQLRAAVVTGQTFRLWLGRQESKRGAGKGEGGRVTVAAGAAVAGEGKKAADRPLISRRGGGQQRAAGASRFKSREHPRVVIKDLDGLEPDRVQAFPPELLRKCFLLTDAPPGICPFTPREQ-------------------------WDREVLKVKKKDAQCVGAKVAARMPPAGSQKPRRGGWCECCEIQYIGTMSEHCASDRHTAAVEADPNFAALLAFESWTGAEGDSSVVSDTAPGRTAAYPTPKAEVAGRDSTAVSPAL----PGPATK-EGHEEGGGEEPLLPPVAGSEAPQGCGEHNDQNPIALGTGSPPSGRRQGSAVSSSREGEREAPTAKKEDSVLEGGAISPSGLREATGGXXXXXXXXXCARASRGSPRLRPKLEQPSGVALCSSEPGAPGECRQAPPRFMRGTCPPNGDSRKDHRRPGSPVADTPATSVASVPSSLADCRSKQDSSSKSSVCPAESPEHDVQGPDELPPLSASSSPTXXXXXXXXXXXXXXXXXXXENSSSVVGGASSSSPDAARRMDLRVRRGGTGGVPEAPGSSRSPPKRGDDKPDTDPQQQRLTRPAPPREIGTAPSPPSATTSEQEQIDERKKEKRQKRALALLEASAGWVASVRGAAGPCPGDRAARSLATTSGGRSCRKVAKASPPSXXXXTAAQSQRVSKEKSPREDVGXXXXXXSPSTGRTTGPSRENEEGQQQCGAARSGVAVETGSNAEARDGCGGSAGTSARQXXXXXXXXXXX----SPAEDAHGRERLPKRARLLPDNGHGYGEEVENIAPSNIAPSSGRTPPSVETNSGGTSSSGRNRCSARQAQASSTASRMGLETAAAGQHSSPASSERTRSISRRLGSKFAENQTGSSNAASTARTKRAAVGASSNIEPPTSKRARANATRPCTRSELPRPTRRKCLSSPGSFLTEFS 3012
+TFYVDPRVEGC SLSSRAQRLGFKTRGFLGEGVT+CVAAST P+AGDGGASE AAT GA GG Q RG+RLSRIHRM AQTE SA+PG+Q HTSIVDQARQLRA VVTGQ FRLWLGRQESKRGAG+GEGGRV AAGAAVA EGK+ ADRPL+SR GGGQQRAAGASRFKSREHPRVVIKDLDGLEPDRVQAFPPELLRKCFL TDAPPGICPFTPREQ WDREVLK+KKKDAQCVGAKVAARMPPAGSQKPRRGGWCECCEIQYIGTMSEHCASDRHTAAVEADP+FAALLAFESWTGAEGDSSVV DTAPGRTAAYPTPKAE+AGRDSTAVSPAL PGPATK EGHEEGGGEEPLLPPVAGSE QGCGE NDQNP+ALGTGSPP GRRQGSAVSSSREGEREAP A EDS+LEGGAISPSGLREATGG XXX ARASRGSPRLRPK +QPSGVAL SSEPGAPGECR APPR RGTCPP+ DSRKDHR+PGSP ADTPATS ASVPSSL DCRS QDSSSKSSV PAESP +DVQGPD LPPLSASSSPTXXXXXXXXXXXXXXXXXXXENSSSVVGGASSS PDAARRMDLRV RGGTGG PEAPG+ SPPK +QQRLTRP+PPREIGT+PSP S TTS+QEQIDER KRALALLEASAGW ASVR AAGPCPGDR RSL TTSGGR CRKV KASP S TAAQSQRVSKEKSPREDVG XXXX SPST RT GPSRENEEG+Q CG RSGV VE GSNAEARDGCGGSA XXXXXXXXXXX SPAEDAHGRER+PKRARL PDNGH YGEE ENI PS S RTPPS E NSGGTSSSGRNR SARQ QASSTASRMGLETAAAGQHSSP SSE TRSISRRLGSKFAENQT SSNAAS ART R AVGA+S IEPPTSKRA+ANATRPCTRSELPRPTRR CLSSPGSFLTEFS
Sbjct: 4 ETFYVDPRVEGCGSLSSRAQRLGFKTRGFLGEGVTVCVAASTNPAAGDGGASEDAATATAGAVGGARQLRGRRLSRIHRM---AQTEFSAQPGRQTHTSIVDQARQLRATVVTGQAFRLWLGRQESKRGAGRGEGGRVPAAAGAAVAVEGKETADRPLMSRGGGGQQRAAGASRFKSREHPRVVIKDLDGLEPDRVQAFPPELLRKCFLHTDAPPGICPFTPREQASVRRRGAQLGSNSSNGVFVLLEEEWDREVLKMKKKDAQCVGAKVAARMPPAGSQKPRRGGWCECCEIQYIGTMSEHCASDRHTAAVEADPHFAALLAFESWTGAEGDSSVVRDTAPGRTAAYPTPKAEMAGRDSTAVSPALSPALPGPATKGEGHEEGGGEEPLLPPVAGSEVLQGCGEDNDQNPVALGTGSPPIGRRQGSAVSSSREGEREAPAATNEDSILEGGAISPSGLREATGGGXXXS-----ARASRGSPRLRPKPDQPSGVALRSSEPGAPGECRPAPPRVKRGTCPPDWDSRKDHRKPGSPTADTPATSAASVPSSLTDCRSNQDSSSKSSVFPAESPVYDVQGPDMLPPLSASSSPTXXXXXXXXXXXXXXXXXXXENSSSVVGGASSSPPDAARRMDLRVGRGGTGGAPEAPGTWPSPPKG---------EQQRLTRPSPPREIGTSPSPASVTTSKQEQIDERXXXXX-KRALALLEASAGWAASVREAAGPCPGDRTPRSLTTTSGGRPCRKVTKASPSSSRGSTAAQSQRVSKEKSPREDVGGXXXX-SPSTSRTNGPSRENEEGEQPCGTDRSGVTVEAGSNAEARDGCGGSAXXXXXXXXXXXXXXXXXQCPPSPAEDAHGRERMPKRARLPPDNGHTYGEEFENIPPS-----SDRTPPSGEKNSGGTSSSGRNRSSARQPQASSTASRMGLETAAAGQHSSPVSSEGTRSISRRLGSKFAENQTRSSNAASRARTNRVAVGATSKIEPPTSKRAQANATRPCTRSELPRPTRRNCLSSPGSFLTEFS 1010
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Length | 3015 |
Hectar predicted targeting category | other localisation |
Gene id | Ec-27_005160.1 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ec-27_005160.1 ID=Ec-27_005160.1|Name=Ec-27_005160.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1005bp MEAIGLSTQDTFYVDPRVEGCDSLSSRAQRLGFKTRGFLGEGVTICVAAS TTPSAGDGGASEGAATPGAAGGVGQSRGQRLSRIHRMVTQAQTESSARPG QQAHTSIVDQARQLRAAVVTGQTFRLWLGRQESKRGAGKGEGGRVTVAAG AAVAGEGKKAADRPLISRRGGGQQRAAGASRFKSREHPRVVIKDLDGLEP DRVQAFPPELLRKCFLLTDAPPGICPFTPREQWDREVLKVKKKDAQCVGA KVAARMPPAGSQKPRRGGWCECCEIQYIGTMSEHCASDRHTAAVEADPNF AALLAFESWTGAEGDSSVVSDTAPGRTAAYPTPKAEVAGRDSTAVSPALP GPATKEGHEEGGGEEPLLPPVAGSEAPQGCGEHNDQNPIALGTGSPPSGR RQGSAVSSSREGEREAPTAKKEDSVLEGGAISPSGLREATGGGGGGGGGG GCARASRGSPRLRPKLEQPSGVALCSSEPGAPGECRQAPPRFMRGTCPPN GDSRKDHRRPGSPVADTPATSVASVPSSLADCRSKQDSSSKSSVCPAESP EHDVQGPDELPPLSASSSPTSTSSTPRTGRRRGTRGSRGENSSSVVGGAS SSSPDAARRMDLRVRRGGTGGVPEAPGSSRSPPKRGDDKPDTDPQQQRLT RPAPPREIGTAPSPPSATTSEQEQIDERKKEKRQKRALALLEASAGWVAS VRGAAGPCPGDRAARSLATTSGGRSCRKVAKASPPSSGGRTAAQSQRVSK EKSPREDVGGGGGGGSPSTGRTTGPSRENEEGQQQCGAARSGVAVETGSN AEARDGCGGSAGTSARQRRAPPPPPPPPSPAEDAHGRERLPKRARLLPDN GHGYGEEVENIAPSNIAPSSGRTPPSVETNSGGTSSSGRNRCSARQAQAS STASRMGLETAAAGQHSSPASSERTRSISRRLGSKFAENQTGSSNAASTA RTKRAAVGASSNIEPPTSKRARANATRPCTRSELPRPTRRKCLSSPGSFL TEFS* back to topspliced messenger RNA >Ec-27_005160.1 ID=Ec-27_005160.1|Name=Ec-27_005160.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=3015bp|location=Sequence derived from alignment at chr_27:4669218..4675632+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.
ATGGAAGCTATAGGGTTGTCCACGCAGGACACGTTCTACGTAGATCCTCG CGTTGAAGGGTGTGACAGCCTGTCGTCAAGAGCCCAGCGACTGGGCTTCA AGACGAGAGGCTTCTTGGGCGAGGGGGTGACGATATGCGTTGCGGCATCA ACAACCCCCTCGGCGGGGGACGGGGGAGCGAGTGAAGGTGCAGCGACACC GGGGGCGGCGGGCGGGGTGGGTCAGTCGCGCGGCCAGCGTCTAAGCCGAA TCCACCGAATGGTCACTCAGGCTCAAACCGAGTCCAGCGCACGGCCGGGG CAACAAGCGCACACGTCCATCGTGGACCAAGCGCGACAGCTCCGCGCGGC CGTCGTTACCGGGCAGACCTTCCGGCTCTGGCTCGGGCGGCAGGAGTCCA AACGGGGGGCCGGCAAAGGAGAAGGAGGGAGGGTGACGGTGGCGGCAGGG GCGGCGGTGGCGGGCGAGGGGAAGAAGGCAGCCGATCGCCCGTTGATCTC CCGCAGGGGTGGTGGGCAGCAGCGGGCGGCGGGCGCGAGCAGGTTCAAGT CGCGGGAGCACCCGCGGGTCGTGATCAAGGACTTGGATGGACTGGAGCCT GATCGGGTGCAGGCGTTCCCCCCGGAGCTTTTGCGCAAGTGTTTTCTTCT CACGGACGCCCCGCCGGGAATCTGCCCGTTCACCCCTCGAGAGCAGTGGG ACCGCGAGGTGCTCAAGGTGAAGAAAAAGGACGCTCAGTGCGTCGGGGCA AAAGTTGCGGCGAGAATGCCGCCGGCCGGCTCGCAGAAGCCCCGCCGGGG AGGCTGGTGCGAGTGCTGCGAGATCCAGTACATCGGAACCATGTCGGAGC ACTGCGCTAGTGATCGGCACACGGCTGCCGTCGAGGCGGACCCTAACTTT GCGGCGCTGCTCGCGTTTGAGAGCTGGACGGGTGCGGAGGGCGACTCGAG CGTCGTCAGCGATACAGCTCCGGGCCGAACGGCAGCGTACCCGACACCCA AAGCGGAGGTCGCCGGCCGCGACAGTACCGCCGTGTCGCCGGCGTTGCCG GGACCGGCTACGAAGGAAGGCCACGAAGAGGGGGGTGGTGAGGAGCCCCT CCTTCCGCCGGTGGCGGGAAGCGAGGCGCCGCAGGGATGCGGGGAACACA ACGACCAAAATCCTATCGCCCTGGGTACAGGTAGCCCCCCGTCAGGCCGC CGACAGGGCAGCGCTGTCTCGTCAAGCCGCGAAGGCGAGCGGGAGGCACC CACGGCGAAGAAGGAAGACTCGGTCTTGGAAGGAGGAGCGATCTCTCCCT CCGGGCTGCGAGAAGCGACCGGAGGTGGCGGCGGCGGCGGCGGCGGCGGC GGCTGCGCGAGGGCCTCGCGGGGCTCGCCACGCCTCCGGCCGAAGCTGGA ACAGCCGAGCGGGGTGGCTCTTTGCAGCAGCGAACCAGGAGCACCAGGAG AGTGTCGACAAGCGCCACCGAGATTCATGCGTGGGACTTGTCCGCCGAAC GGAGACAGCCGGAAGGACCATCGAAGACCAGGCTCCCCTGTCGCCGACAC GCCGGCAACGTCTGTCGCGAGCGTCCCGTCCTCCCTAGCGGACTGCCGCA GCAAGCAGGACAGCAGCAGCAAGAGCTCGGTATGCCCGGCCGAATCGCCG GAGCATGATGTTCAAGGGCCGGACGAGTTGCCCCCGTTGTCGGCGTCATC TTCGCCCACGTCGACGTCGTCCACACCGCGCACCGGGCGACGGCGCGGCA CCCGCGGCTCCCGGGGAGAAAATTCAAGCTCCGTGGTGGGCGGCGCCTCA TCTTCGTCGCCCGATGCGGCACGGAGAATGGACCTGCGGGTGAGACGCGG GGGGACGGGCGGGGTGCCTGAAGCCCCCGGTAGTTCGCGCTCCCCGCCGA AACGCGGCGACGACAAGCCGGACACCGATCCGCAACAACAGCGGTTGACC CGTCCTGCTCCACCGCGCGAGATCGGGACCGCGCCCTCTCCCCCATCCGC GACGACGAGCGAGCAAGAGCAGATCGACGAGCGGAAGAAGGAGAAGAGGC AGAAGCGCGCGCTGGCGCTGCTCGAAGCCAGCGCGGGCTGGGTCGCGTCG GTCCGAGGAGCGGCCGGCCCGTGTCCAGGCGACCGCGCCGCCAGAAGCCT GGCGACCACCAGCGGCGGTCGTTCTTGCAGAAAGGTCGCCAAAGCCTCGC CGCCCTCCTCGGGGGGAAGAACGGCGGCACAAAGCCAGCGAGTGTCGAAG GAGAAGAGCCCGAGGGAAGACGTCGGCGGTGGCGGCGGCGGCGGCTCGCC TTCGACGGGCCGCACCACGGGTCCATCGCGCGAGAACGAGGAAGGACAAC AACAGTGTGGTGCTGCCCGTTCGGGGGTGGCGGTAGAGACAGGGTCGAAC GCGGAGGCACGCGATGGCTGCGGGGGGTCGGCTGGGACCTCGGCACGACA ACGTCGCGCGCCGCCGCCGCCGCCGCCGCCGCCGTCTCCTGCTGAGGATG CCCATGGAAGGGAGCGGCTGCCCAAGAGAGCAAGGCTTCTGCCTGACAAC GGACACGGCTACGGCGAGGAGGTCGAAAACATCGCCCCCTCGAACATCGC CCCCTCGAGCGGCCGGACACCACCCAGCGTGGAGACGAACAGCGGTGGAA CCAGCAGCAGTGGAAGAAACCGTTGCAGCGCTCGCCAAGCACAAGCCTCG AGCACCGCTAGCAGGATGGGGCTAGAAACTGCCGCAGCGGGCCAGCACAG CTCGCCGGCGTCGAGCGAAAGGACTCGAAGCATTTCGCGCAGGCTAGGCT CGAAGTTTGCGGAGAACCAGACCGGTAGCTCCAACGCCGCGAGCACAGCG CGTACGAAACGCGCCGCGGTGGGCGCAAGCAGCAATATAGAACCACCCAC AAGTAAGCGAGCGAGGGCGAATGCGACCCGCCCGTGCACACGCTCGGAGT TGCCAAGACCAACGCGCCGGAAGTGCTTGTCTTCACCGGGGTCTTTTTTG ACCGAATTTTCGTAG back to topprotein sequence of Ec-27_005160.1 >Ec-27_005160.1 ID=Ec-27_005160.1|Name=Ec-27_005160.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=1005bp
MEAIGLSTQDTFYVDPRVEGCDSLSSRAQRLGFKTRGFLGEGVTICVAAS TTPSAGDGGASEGAATPGAAGGVGQSRGQRLSRIHRMVTQAQTESSARPG QQAHTSIVDQARQLRAAVVTGQTFRLWLGRQESKRGAGKGEGGRVTVAAG AAVAGEGKKAADRPLISRRGGGQQRAAGASRFKSREHPRVVIKDLDGLEP DRVQAFPPELLRKCFLLTDAPPGICPFTPREQWDREVLKVKKKDAQCVGA KVAARMPPAGSQKPRRGGWCECCEIQYIGTMSEHCASDRHTAAVEADPNF AALLAFESWTGAEGDSSVVSDTAPGRTAAYPTPKAEVAGRDSTAVSPALP GPATKEGHEEGGGEEPLLPPVAGSEAPQGCGEHNDQNPIALGTGSPPSGR RQGSAVSSSREGEREAPTAKKEDSVLEGGAISPSGLREATGGGGGGGGGG GCARASRGSPRLRPKLEQPSGVALCSSEPGAPGECRQAPPRFMRGTCPPN GDSRKDHRRPGSPVADTPATSVASVPSSLADCRSKQDSSSKSSVCPAESP EHDVQGPDELPPLSASSSPTSTSSTPRTGRRRGTRGSRGENSSSVVGGAS SSSPDAARRMDLRVRRGGTGGVPEAPGSSRSPPKRGDDKPDTDPQQQRLT RPAPPREIGTAPSPPSATTSEQEQIDERKKEKRQKRALALLEASAGWVAS VRGAAGPCPGDRAARSLATTSGGRSCRKVAKASPPSSGGRTAAQSQRVSK EKSPREDVGGGGGGGSPSTGRTTGPSRENEEGQQQCGAARSGVAVETGSN AEARDGCGGSAGTSARQRRAPPPPPPPPSPAEDAHGRERLPKRARLLPDN GHGYGEEVENIAPSNIAPSSGRTPPSVETNSGGTSSSGRNRCSARQAQAS STASRMGLETAAAGQHSSPASSERTRSISRRLGSKFAENQTGSSNAASTA RTKRAAVGASSNIEPPTSKRARANATRPCTRSELPRPTRRKCLSSPGSFL TEFS* back to topmRNA from alignment at chr_27:4669218..4675632+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Ec-27_005160.1 ID=Ec-27_005160.1|Name=Ec-27_005160.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=6415bp|location=Sequence derived from alignment at chr_27:4669218..4675632+ (Ectocarpus species7 Ec32 male_plus_femaleSDR) ATGGAAGCTATAGGGTTGTCCACGCAGGTCAGTGAATGGAAACTCGCGCG
TTTTTGGCGGCTTGTATTTTTGGCGGCGAAAACTCCGTGCACAGCCTCAA
ACTTGCCACAGGCAACGAAGGTTGCATCTTGGACGTTGGTCTCAATGCAC
GGTCCGTGCCGTAAGCCATTTTCGTCAGCCAGCGGGCACCGTCAAGAATT
TCCACACGTTCTCAAGCTACAACGGCAAGCAGATATTCTTGGAGCCGACT
GGTGGTAGACAAGACTGCCGGTCGATATAGTTGCATCAAATTCCACAAAA
CCCCTGGACCGATTTTGGAAACCCGACAAAGCCTGCAGCAATAACAGCAG
TGGCGTCGTCGAAAATTGCGGTTTTGGAACCGTCTCGTCGAGAGCATCCC
GAAAAGACATCGTTTGATTTTGGCATCCCTCTTCGTCGTGGAGTAATCGA
GCTTCAAAAATCGGTCCATATAGCATGCACAGCAACCAACGGCAATGTGT
TTGCATTGCCGAAGTTCGCGCACCCGGTTTACTGCTGTCGTCTGCCTGCT
GCTTGGGGCTCCTTTCACCTACGAGTATATCACTGGTGCAAGTTGTCTGC
ACTCAGCTGCGGTCTTGTAAACATATACTTGTCTATCATACTACAGAGCA
CACCAATTCTGTTGGTCATAGACCTGCTTCTATGTAGTGTTTGCGAACTT
TTTCCGAAAGTACTTTGCTCGCACACTTGTCGCGCACAATTAAAATTTTG
ACAGCACCCGTGGGAAAGGTGAAAGAAGGAAGAAATTCCTGCTGTGTAGC
CACGGCTGGTGCGCCAAACATGTACCGAATGGTGTGGACTGAGGCCCAAA
ATAGTTGAATTATGGGACAATACCCAAACGCAAAACTCTGCCCTCTTCCC
TCACAGCTGTTGGCAGCCCCAATTTCGTCCAAACGCCATCCCGAAGTACA
CCTTGTGCGAGAGAGCTGCCTTGGTGATTGTGCTTCTACTTCGCAACACT
TGTGCATACAGGTGTTTTTTTTATGTTTGGTTTTGAATCCATCATCAAGT
CTCTTCTCTCTGTACCCTGTACCACCAACTGCCTGCCAATCTCCTTCACA
CCGTTGTAAGGCAGGACCGCGGCCACACAGGGAGGCTCGTCTGCCGAGGC
CCCTTATATACATCTCGACTGCACATAGAGCTCATGCGTACCACCGTCCG
TACCTACGCGAAGTGATCGCAACCCCCCTAGACCGACTCCCATAGCTCGA
TTGCTCCGCACCGGAGAGGTCACCACTGCCGAAACGGGTTAGGATCGGGT
TAGGGTTGCTTTAGAAAAAGTATCTCGCCGAGCGTTCCTTACGCGCACGG
GCCGTTTTTTTTTAGCCCTCTTGTTTGTGGAAAGTAGAGCTACGGAAATC
GGTCTTGGGGTTTTACGATCACTCTCGCAATTGCTAAAGTCGGGGCCGCT
AGTTCTCTGTTGAAACCCAGCTCATCGACTGTCCTGTTTTCGGGAGAATT
GCCTTCCACGTGAAATTCTCATGCCATCCGTCAGTGTTTTCATCGTTGGT
TTCAAGTCCTTCGTCACCGGTCAACCCGTTCAAAGGCTCGCTAAGATATC
TACGCCCAGACATCGAGGAGGCACAGCATTCTCTAAGCACCACACAAATC
AATGGAGACGTGGTACAGTGTACATTGTATACCCCAAACATGAAGAATAT
CCGATCTTCGATCTTCGATGAAACTGTCCTTCTTGCCACCGAGCGTCTCG
TGGGCCTTGTCGTACTCATCCTCCGTAGATGCTTACCGTAAGGCCCGACC
CCCTTGCTACAGCCCGTAATGCAAACCTCGTGCACACACTTCCGCTCGTT
GTAATCGTGCGTGCTAGGACACGTTCTACGTAGATCCTCGCGTTGAAGGG
TGTGACAGCCTGTCGTCAAGAGCCCAGCGACTGGGCTTCAAGACGAGAGG
CTTCTTGGGCGAGGGGGTGACGATATGCGTTGCGGCATCAACAACCCCCT
CGGCGGGGGACGGGGGAGCGAGTGAAGGTGCAGCGACACCGGGGGCGGCG
GGCGGGGTGGGTCAGTCGCGCGGCCAGCGTCTAAGCCGAATCCACCGAAT
GGTAAGAGATATCGCAGTAGCAGAAATCAGGCCGGGGCAAGCCACCCTTG
CGCGGTCTGGAACAAGTGCAGTACGGCGTGTCCAGCTTTTTTTAGGCCTT
TGCGACGAGTTGTTGTTGACATTTATGACGCATGGCACCAACCATGCAGC
GCACACCTTGGAATGCGGCCTGTGCAGCCGATTTATCCACTACTTGAAAA
AACCGCGAACGCTTTGGCAGGAAAGAGCATAGGTCTCCCATTAAGACGAA
GCGGACAAATACTTGGAGCGCAAGCTGCGTTGTTTGTCGTTCCGAAAGAT
TCGACCAATCACGTACCACACACGTGACAAAGAATCGTTGGCCCCGGGGC
GCCGTGTCGCGTACGTACCAAAACCCAGGTCACTCAGGCTCAAACCGAGT
CCAGCGCACGGCCGGGGCAACAAGCGCACACGTCCATCGTGGACCAAGCG
CGACAGCTCCGCGCGGCCGTCGTTACCGGGCAGACCTTCCGGCTCTGGCT
CGGGCGGCAGGAGTCCAAACGGGGGGCCGGCAAAGGAGAAGGAGGGAGGG
TGACGGTGGCGGCAGGGGCGGCGGTGGCGGGCGAGGGGAAGAAGGCAGCC
GATCGCCCGTTGATCTCCCGCAGGGGTGGTGGGCAGCAGCGGGCGGCGGG
CGCGAGCAGGTTCAAGTCGCGGGAGCACCCGCGGGTCGTGATCAAGGACT
TGGATGGACTGGAGCCTGATCGGGTGCAGGTGAGCATCGGGACAGCGACA
CCCCGGGGCGGTTTTGGGTCTTGCGCGGCGTGGGCGCATGCCTGGGATGG
ATGACCCTAACCCTATTGGTATGATGCTGTCTCCTGATTGCCCTCCTCGC
CTCCTCCCCGTCGTTTTTCCTCCTCCCCCTGTGAATGCAGGCGTTCCCCC
CGGAGCTTTTGCGCAAGTGTTTTCTTCTCACGGACGCCCCGCCGGGAATC
TGCCCGTTCACCCCTCGAGAGCAGGCAAGTTCGCAGAAGATGTAGACATA
CATGATCGTGCAGCTGTGGTGCTCTCAGTGGTAGGAGTCCAGGCAGTCTT
CGAGTGGCCGTAGGCAAGCGGAAGCACGACGCAGCACAACTTGGCAGCAA
CAGTAGCAACAGTGTTATTGTTCTTCTGGAGGAAGGTACTGCCGTACAAA
GGTACCGTTCGCCTGGCGCTCTTACCTTTGAGTGTTTCGCTCGTTTCCGA
TAATGCCTCGATTCCCGTGGCACCGTGCGGACGCATCCCCCATGCCAGCA
AGCCCAGAACCCGATCTCTGTGGTTTCCCCCCCCTTCCTCTCTGCGCTTG
GGTGATAAAAACAGTGGGACCGCGAGGTGCTCAAGGTGAAGAAAAAGGAC
GCTCAGTGCGTCGGGGCAAAAGTTGCGGCGAGAATGCCGCCGGCCGGCTC
GCAGAAGCCCCGCCGGGGAGGCTGGTGCGAGTGCTGCGAGATCCAGTACA
TCGGAACCATGTCGGAGGTTAGTGGACGGGGTGGGGATTGCAGACACAAA
AGAGTCTTGAGTGCATCTGCAACGTTGAGGATCCCGGCTTTCCCCTTCCT
TTGGGCGGAGAGCGGGTGGTCTTCGATGGGTGGTGTCGGCATCGAGGGTT
TAGGCTTGTGAGCAATGGCGCGGCGTGCTGCAGGAGCATAGTAGACACGT
GTCTTGCAAGAGCTACATAGCTTTGTCGTTGTTTGCCCGATCTATTGGGC
GTCTGCTTTTTCCAAAGTCACCGGCTTCGGGGTTACCTCTCTTTACTCTG
AGGCGTTTTTGGCAACTTGATGCATGTTGGGTGCAGACAAAATGATGTGG
GTATTTCGTCTTTCGATGGCAGAGGGTGGCGCACGTACGATTTGGTAGGC
CACGTTTCTCGCCTCGCAAATTCCAGGGGATTCACGGTGTGATTGCTCTG
CTGCTTTACCGCATTGTATCCTCGTTTCAGTCTATGCCCTTGACCCTAGG
CACGCCTTCCCTCTCCACACTCCAAACGAAACACGTCGTCGCACGTCAGG
CCTGCCTGTACGATGCTGCACTGGCTTCTCCGTACTTGAACGGACTTGCT
GTTAGTGATGTTGCGATTCAATGCCCGTGTTCTTTACACATTCTCTTCTA
ACGACAAATCCTTATGCTGTATCCCCGTCATGTCATGTCTTGCCCGCAGC
ACTGCGCTAGTGATCGGCACACGGCTGCCGTCGAGGCGGACCCTAACTTT
GCGGCGCTGCTCGCGTTTGAGAGCTGGACGGGTGCGGAGGGCGACTCGAG
CGTCGTCAGCGATACAGCTCCGGGCCGAACGGCAGCGTACCCGACACCCA
AAGCGGAGGTCGCCGGCCGCGACAGTACCGCCGTGTCGCCGGCGTTGCCG
GGACCGGCTACGAAGGAAGGCCACGAAGAGGGGGGTGGTGAGGAGCCCCT
CCTTCCGCCGGTGGCGGGAAGCGAGGCGCCGCAGGGATGCGGGGAACACA
ACGACCAAAATCCTATCGCCCTGGGTACAGGTAGCCCCCCGTCAGGCCGC
CGACAGGGCAGCGCTGTCTCGTCAAGCCGCGAAGGCGAGCGGGAGGCACC
CACGGCGAAGAAGGAAGACTCGGTCTTGGAAGGAGGAGCGATCTCTCCCT
CCGGGCTGCGAGAAGCGACCGGAGGTGGCGGCGGCGGCGGCGGCGGCGGC
GGCTGCGCGAGGGCCTCGCGGGGCTCGCCACGCCTCCGGCCGAAGCTGGA
ACAGCCGAGCGGGGTGGCTCTTTGCAGCAGCGAACCAGGAGCACCAGGAG
AGTGTCGACAAGCGCCACCGAGATTCATGCGTGGGACTTGTCCGCCGAAC
GGAGACAGCCGGAAGGACCATCGAAGACCAGGCTCCCCTGTCGCCGACAC
GCCGGCAACGTCTGTCGCGAGCGTCCCGTCCTCCCTAGCGGACTGCCGCA
GCAAGCAGGACAGCAGCAGCAAGAGCTCGGTATGCCCGGCCGAATCGCCG
GAGCATGATGTTCAAGGGCCGGACGAGTTGCCCCCGTTGTCGGCGTCATC
TTCGCCCACGTCGACGTCGTCCACACCGCGCACCGGGCGACGGCGCGGCA
CCCGCGGCTCCCGGGGAGAAAATTCAAGCTCCGTGGTGGGCGGCGCCTCA
TCTTCGTCGCCCGATGCGGCACGGAGAATGGACCTGCGGGTGAGACGCGG
GGGGACGGGCGGGGTGCCTGAAGCCCCCGGTAGTTCGCGCTCCCCGCCGA
AACGCGGCGACGACAAGCCGGACACCGATCCGCAACAACAGCGGTTGACC
CGTCCTGCTCCACCGCGCGAGATCGGGACCGCGCCCTCTCCCCCATCCGC
GACGACGAGCGAGCAAGAGCAGATCGACGAGCGGAAGAAGGAGAAGAGGC
AGAAGCGCGCGCTGGCGCTGCTCGAAGCCAGCGCGGGCTGGGTCGCGTCG
GTCCGAGGAGCGGCCGGCCCGTGTCCAGGCGACCGCGCCGCCAGAAGCCT
GGCGACCACCAGCGGCGGTCGTTCTTGCAGAAAGGTCGCCAAAGCCTCGC
CGCCCTCCTCGGGGGGAAGAACGGCGGCACAAAGCCAGCGAGTGTCGAAG
GAGAAGAGCCCGAGGGAAGACGTCGGCGGTGGCGGCGGCGGCGGCTCGCC
TTCGACGGGCCGCACCACGGGTCCATCGCGCGAGAACGAGGAAGGACAAC
AACAGTGTGGTGCTGCCCGTTCGGGGGTGGCGGTAGAGACAGGGTCGAAC
GCGGAGGCACGCGATGGCTGCGGGGGGTCGGCTGGGACCTCGGCACGACA
ACGTCGCGCGCCGCCGCCGCCGCCGCCGCCGCCGTCTCCTGCTGAGGATG
CCCATGGAAGGGAGCGGCTGCCCAAGAGAGCAAGGCTTCTGCCTGACAAC
GGACACGGCTACGGCGAGGAGGTCGAAAACATCGCCCCCTCGAACATCGC
CCCCTCGAGCGGCCGGACACCACCCAGCGTGGAGACGAACAGCGGTGGAA
CCAGCAGCAGTGGAAGAAACCGTTGCAGCGCTCGCCAAGCACAAGCCTCG
AGCACCGCTAGCAGGATGGGGCTAGAAACTGCCGCAGCGGGCCAGCACAG
CTCGCCGGCGTCGAGCGAAAGGACTCGAAGCATTTCGCGCAGGCTAGGCT
CGAAGTTTGCGGAGAACCAGACCGGTAGCTCCAACGCCGCGAGCACAGCG
CGTACGAAACGCGCCGCGGTGGGCGCAAGCAGCAATATAGAACCACCCAC
AAGTAAGCGAGCGAGGGCGAATGCGACCCGCCCGTGCACACGCTCGGAGT
TGCCAAGACCAACGCGCCGGAAGTGCTTGTCTTCACCGGGGTCTTTTTTG
ACCGAATTTTCGTAG back to topCoding sequence (CDS) from alignment at chr_27:4669218..4675632+ >Ec-27_005160.1 ID=Ec-27_005160.1|Name=Ec-27_005160.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=3015bp|location=Sequence derived from alignment at chr_27:4669218..4675632+ (Ectocarpus species7 Ec32 male_plus_femaleSDR) ATGGAAGCTATAGGGTTGTCCACGCAGGACACGTTCTACGTAGATCCTCG CGTTGAAGGGTGTGACAGCCTGTCGTCAAGAGCCCAGCGACTGGGCTTCA AGACGAGAGGCTTCTTGGGCGAGGGGGTGACGATATGCGTTGCGGCATCA ACAACCCCCTCGGCGGGGGACGGGGGAGCGAGTGAAGGTGCAGCGACACC GGGGGCGGCGGGCGGGGTGGGTCAGTCGCGCGGCCAGCGTCTAAGCCGAA TCCACCGAATGGTCACTCAGGCTCAAACCGAGTCCAGCGCACGGCCGGGG CAACAAGCGCACACGTCCATCGTGGACCAAGCGCGACAGCTCCGCGCGGC CGTCGTTACCGGGCAGACCTTCCGGCTCTGGCTCGGGCGGCAGGAGTCCA AACGGGGGGCCGGCAAAGGAGAAGGAGGGAGGGTGACGGTGGCGGCAGGG GCGGCGGTGGCGGGCGAGGGGAAGAAGGCAGCCGATCGCCCGTTGATCTC CCGCAGGGGTGGTGGGCAGCAGCGGGCGGCGGGCGCGAGCAGGTTCAAGT CGCGGGAGCACCCGCGGGTCGTGATCAAGGACTTGGATGGACTGGAGCCT GATCGGGTGCAGGCGTTCCCCCCGGAGCTTTTGCGCAAGTGTTTTCTTCT CACGGACGCCCCGCCGGGAATCTGCCCGTTCACCCCTCGAGAGCAGTGGG ACCGCGAGGTGCTCAAGGTGAAGAAAAAGGACGCTCAGTGCGTCGGGGCA AAAGTTGCGGCGAGAATGCCGCCGGCCGGCTCGCAGAAGCCCCGCCGGGG AGGCTGGTGCGAGTGCTGCGAGATCCAGTACATCGGAACCATGTCGGAGC ACTGCGCTAGTGATCGGCACACGGCTGCCGTCGAGGCGGACCCTAACTTT GCGGCGCTGCTCGCGTTTGAGAGCTGGACGGGTGCGGAGGGCGACTCGAG CGTCGTCAGCGATACAGCTCCGGGCCGAACGGCAGCGTACCCGACACCCA AAGCGGAGGTCGCCGGCCGCGACAGTACCGCCGTGTCGCCGGCGTTGCCG GGACCGGCTACGAAGGAAGGCCACGAAGAGGGGGGTGGTGAGGAGCCCCT CCTTCCGCCGGTGGCGGGAAGCGAGGCGCCGCAGGGATGCGGGGAACACA ACGACCAAAATCCTATCGCCCTGGGTACAGGTAGCCCCCCGTCAGGCCGC CGACAGGGCAGCGCTGTCTCGTCAAGCCGCGAAGGCGAGCGGGAGGCACC CACGGCGAAGAAGGAAGACTCGGTCTTGGAAGGAGGAGCGATCTCTCCCT CCGGGCTGCGAGAAGCGACCGGAGGTGGCGGCGGCGGCGGCGGCGGCGGC GGCTGCGCGAGGGCCTCGCGGGGCTCGCCACGCCTCCGGCCGAAGCTGGA ACAGCCGAGCGGGGTGGCTCTTTGCAGCAGCGAACCAGGAGCACCAGGAG AGTGTCGACAAGCGCCACCGAGATTCATGCGTGGGACTTGTCCGCCGAAC GGAGACAGCCGGAAGGACCATCGAAGACCAGGCTCCCCTGTCGCCGACAC GCCGGCAACGTCTGTCGCGAGCGTCCCGTCCTCCCTAGCGGACTGCCGCA GCAAGCAGGACAGCAGCAGCAAGAGCTCGGTATGCCCGGCCGAATCGCCG GAGCATGATGTTCAAGGGCCGGACGAGTTGCCCCCGTTGTCGGCGTCATC TTCGCCCACGTCGACGTCGTCCACACCGCGCACCGGGCGACGGCGCGGCA CCCGCGGCTCCCGGGGAGAAAATTCAAGCTCCGTGGTGGGCGGCGCCTCA TCTTCGTCGCCCGATGCGGCACGGAGAATGGACCTGCGGGTGAGACGCGG GGGGACGGGCGGGGTGCCTGAAGCCCCCGGTAGTTCGCGCTCCCCGCCGA AACGCGGCGACGACAAGCCGGACACCGATCCGCAACAACAGCGGTTGACC CGTCCTGCTCCACCGCGCGAGATCGGGACCGCGCCCTCTCCCCCATCCGC GACGACGAGCGAGCAAGAGCAGATCGACGAGCGGAAGAAGGAGAAGAGGC AGAAGCGCGCGCTGGCGCTGCTCGAAGCCAGCGCGGGCTGGGTCGCGTCG GTCCGAGGAGCGGCCGGCCCGTGTCCAGGCGACCGCGCCGCCAGAAGCCT GGCGACCACCAGCGGCGGTCGTTCTTGCAGAAAGGTCGCCAAAGCCTCGC CGCCCTCCTCGGGGGGAAGAACGGCGGCACAAAGCCAGCGAGTGTCGAAG GAGAAGAGCCCGAGGGAAGACGTCGGCGGTGGCGGCGGCGGCGGCTCGCC TTCGACGGGCCGCACCACGGGTCCATCGCGCGAGAACGAGGAAGGACAAC AACAGTGTGGTGCTGCCCGTTCGGGGGTGGCGGTAGAGACAGGGTCGAAC GCGGAGGCACGCGATGGCTGCGGGGGGTCGGCTGGGACCTCGGCACGACA ACGTCGCGCGCCGCCGCCGCCGCCGCCGCCGCCGTCTCCTGCTGAGGATG CCCATGGAAGGGAGCGGCTGCCCAAGAGAGCAAGGCTTCTGCCTGACAAC GGACACGGCTACGGCGAGGAGGTCGAAAACATCGCCCCCTCGAACATCGC CCCCTCGAGCGGCCGGACACCACCCAGCGTGGAGACGAACAGCGGTGGAA CCAGCAGCAGTGGAAGAAACCGTTGCAGCGCTCGCCAAGCACAAGCCTCG AGCACCGCTAGCAGGATGGGGCTAGAAACTGCCGCAGCGGGCCAGCACAG CTCGCCGGCGTCGAGCGAAAGGACTCGAAGCATTTCGCGCAGGCTAGGCT CGAAGTTTGCGGAGAACCAGACCGGTAGCTCCAACGCCGCGAGCACAGCG CGTACGAAACGCGCCGCGGTGGGCGCAAGCAGCAATATAGAACCACCCAC AAGTAAGCGAGCGAGGGCGAATGCGACCCGCCCGTGCACACGCTCGGAGT TGCCAAGACCAACGCGCCGGAAGTGCTTGTCTTCACCGGGGTCTTTTTTG ACCGAATTTTCGTAG back to top
Synonyms
The feature 'Ec-27_005160.1' has the following synonyms
Synonym |
Esi0000_0250 |
Esi_0000_0250 |
|