Ec-27_005150.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-27_005150.1
Unique NameEc-27_005150.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length560
Homology
BLAST of Ec-27_005150.1 vs. uniprot
Match: D8LB55_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB55_ECTSI)

HSP 1 Score: 1099 bits (2842), Expect = 0.000e+0
Identity = 559/559 (100.00%), Postives = 559/559 (100.00%), Query Frame = 1
Query:    1 MPPSSRPLDGLVWPLVPNSKKAGDRSTTWANKQALAAAIGAVDPALAQRVLDERNWRQKYTKYVYKHVEACLQSKEAAVASSKAGLEWVHNNFEFVREGKSMKLAAAMSSITGSFETAVIKGTKPKPTETVLQVPYKDEILTGNALEDQVDKWVSYGTIEPSAGAAIKDVSQKGEWRDLSDRYFVLLGAGSAMGPLKLLLELGANIVAIDLDRPGIWQRLLGLAENSCGTMIFPLKAGKPQASLSSREELCAAAGANLLAHTPEILNWLKTVSPEKPLVVGSYAYLDGELHVRLSLAMDAIVKGLTESRRDVMPAYLCTPTDVHVIPSAAHDAAASQARSLGLVNLLCKLTGNLAMTLTSNVKPAVVGADGGSLYLVDGLVNKQGPNYALAKRMQHWRAVVARQEYRCKVSSNIAPSTATASVVSNRLFAMAYGGMHFFQPMEVFQQETSNAVMGALLLRDVADPATPSNPTLPLKNPLQLFSFGSFHGGVWRMAYTIDSIGTASVLAYLLVGLLSLLKYFLLAFVVGFAAMKAKDGENPLEALDGVKDSVLGLFKGEL 1677
            MPPSSRPLDGLVWPLVPNSKKAGDRSTTWANKQALAAAIGAVDPALAQRVLDERNWRQKYTKYVYKHVEACLQSKEAAVASSKAGLEWVHNNFEFVREGKSMKLAAAMSSITGSFETAVIKGTKPKPTETVLQVPYKDEILTGNALEDQVDKWVSYGTIEPSAGAAIKDVSQKGEWRDLSDRYFVLLGAGSAMGPLKLLLELGANIVAIDLDRPGIWQRLLGLAENSCGTMIFPLKAGKPQASLSSREELCAAAGANLLAHTPEILNWLKTVSPEKPLVVGSYAYLDGELHVRLSLAMDAIVKGLTESRRDVMPAYLCTPTDVHVIPSAAHDAAASQARSLGLVNLLCKLTGNLAMTLTSNVKPAVVGADGGSLYLVDGLVNKQGPNYALAKRMQHWRAVVARQEYRCKVSSNIAPSTATASVVSNRLFAMAYGGMHFFQPMEVFQQETSNAVMGALLLRDVADPATPSNPTLPLKNPLQLFSFGSFHGGVWRMAYTIDSIGTASVLAYLLVGLLSLLKYFLLAFVVGFAAMKAKDGENPLEALDGVKDSVLGLFKGEL
Sbjct:    1 MPPSSRPLDGLVWPLVPNSKKAGDRSTTWANKQALAAAIGAVDPALAQRVLDERNWRQKYTKYVYKHVEACLQSKEAAVASSKAGLEWVHNNFEFVREGKSMKLAAAMSSITGSFETAVIKGTKPKPTETVLQVPYKDEILTGNALEDQVDKWVSYGTIEPSAGAAIKDVSQKGEWRDLSDRYFVLLGAGSAMGPLKLLLELGANIVAIDLDRPGIWQRLLGLAENSCGTMIFPLKAGKPQASLSSREELCAAAGANLLAHTPEILNWLKTVSPEKPLVVGSYAYLDGELHVRLSLAMDAIVKGLTESRRDVMPAYLCTPTDVHVIPSAAHDAAASQARSLGLVNLLCKLTGNLAMTLTSNVKPAVVGADGGSLYLVDGLVNKQGPNYALAKRMQHWRAVVARQEYRCKVSSNIAPSTATASVVSNRLFAMAYGGMHFFQPMEVFQQETSNAVMGALLLRDVADPATPSNPTLPLKNPLQLFSFGSFHGGVWRMAYTIDSIGTASVLAYLLVGLLSLLKYFLLAFVVGFAAMKAKDGENPLEALDGVKDSVLGLFKGEL 559          
BLAST of Ec-27_005150.1 vs. uniprot
Match: A0A835Z6A9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6A9_9STRA)

HSP 1 Score: 595 bits (1535), Expect = 8.620e-207
Identity = 320/527 (60.72%), Postives = 387/527 (73.43%), Query Frame = 1
Query:    4 PPSSRPLDGLVWPLVPNSKKAGDRSTTWANKQALAAAIGAVDPALAQRVLDERNWRQKYTKYVYKHVEACLQSKEAAVASSKAGLEWVHNNFEFVREGKSMKLAAAMSSITGSFETAVIKGTKPKP-TETVLQVPYKDEILTGNALEDQVDKWVSYGTIEPSAGAAIKDVSQKGEWRDLSDRYFVLLGAGSAMGPLKLLLELGANIVAIDLDRPGIWQRLLGLAENSCGTMIFPLKAGKPQASLSSREELCAAAGANLLAHTPEILNWLKTVSPEKPLVVGSYAYLDGELHVRLSLAMDAIVKGLTESRRD---VMPAYLCTPTDVHVIPSAAHDAAASQARSLGL-VNLLCKLT-----GNLAMTLTSNVKPAVVGADGGSLYLVDGLVNKQGPNYALAKRMQHWRAVVARQEYRCKVSSNIAPSTATASVVSNRLFAMAYGGMHFFQPMEVFQQETSNAVMGALLLRDVADP-ATPSNPTLPLKNPLQLFSFGSFHGGVWRMAYTIDSIGTASVLAYLLVGLLSL 1551
            PP  RP  G+ WPLVPNSKK GDRSTT+ANK AL AA GA+ P  A  +  ERNWR+ Y KY+ +HV ACL+ K+ AV +++AGL+WVH+NFEF+++GK+M L+ AM++I  +F+TA + G+ P+P T   L++PYK ++L G  LE QV +WV YGTIEPSAG AI  V +  EWRDLSD+YFVLLGA SAMGPL+LLLELGAN++A+DLDRP IW  LL LA  S GTM FP K     A L+  E++   AG NLL  TPEIL+WL++    KPLVVG+YAYLDGELHVR+SLAMDAI+KGLTE +     V PAYLCTPTD+HV  + A  AAA     L      L +LT     G L       +   V G +  + YLVDGLVN+QGPNYALAKRMQHWRAVVAR    C VSSNIAPSTATASV  NRLFAMAYGGMH+F+PMEVFQQETSNAVMGALLLRDV+D  A  ++P +PL  PLQ+FSFG+FHGGVWR+ + +D+IG AS+L YLLV LL L
Sbjct:    3 PPPRRPPAGIQWPLVPNSKKEGDRSTTYANKAALKAASGAIRPEEAAAIDAERNWRKNYGKYLLRHVSACLEVKDGAVTAAEAGLQWVHDNFEFIKDGKTMPLSTAMATIKSTFKTATVTGSVPRPETPPPLRIPYKGKVLEGGELERQVVRWVEYGTIEPSAGDAILTVMRTDEWRDLSDKYFVLLGASSAMGPLRLLLELGANVIAVDLDRPHIWTSLLALARASSGTMTFPTKGDT--AGLTD-EQIAGVAGCNLLTETPEILDWLRSTHAGKPLVVGAYAYLDGELHVRVSLAMDAIIKGLTEDKAAHPAVTPAYLCTPTDIHVSTADARAAAAKNYSPLSSPFAALLRLTPLFWFGPLRPNFGGRL--TVKGPEE-TYYLVDGLVNRQGPNYALAKRMQHWRAVVARARGGCAVSSNIAPSTATASVTHNRLFAMAYGGMHWFRPMEVFQQETSNAVMGALLLRDVSDRRAKGASPAVPLSTPLQIFSFGAFHGGVWRLGFKMDTIGEASILMYLLVKLLKL 523          
BLAST of Ec-27_005150.1 vs. uniprot
Match: W7TMF0_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TMF0_9STRA)

HSP 1 Score: 525 bits (1352), Expect = 2.790e-178
Identity = 288/531 (54.24%), Postives = 363/531 (68.36%), Query Frame = 1
Query:   31 LVW---PLVPNSKKAGDRS--------TTWANKQALAAAIGAVDPALAQRVLDERNWRQKYTKYVYKHVEACLQSKEAAVASSKAGLEWVHNNFEFVREGKSMKLAAAMSSITGS--FETAVIKGTKPKPT-ETVLQVPYKDEILTGNALEDQVDKWVSYGTIEPSAGAAIKDVSQKGEWRDLSDRYFVLLGAGSAMGPLKLLLELGANIVAIDLDRPGIWQRLLGLAENSCGTMIFPLKAGKPQASLSSREELCAAAGANLLAHTPEILNWLKTVSPEKPLVVGSYAYLDGELHVRLSLAMDAIVKGLTESRRDVMPAYLCTPTDVHVIPSAAHDAAASQARSLGLVNLLCKLT-GNLAMT--LTSNVKPAVVGADGGSLYLVDGLVNKQGPNYALAKRMQHWRAVVARQEYRCKVSSNIAPSTATASVVSNRLFAMAYGGMHFFQPMEVFQQETSNAVMGALLLRDVADPATPSNPTLPLKNPLQLFSFGSFHGGVWRMAYTIDSIGTASVLAYLL---VGLLSLLKYF 1563
            L+W   P VP  +K    S        +T+ NK A AAA+GAVD A   ++  E+ WRQKY KY+ + V+  L+S + AV+ ++ GLE+ + NFEF+R+GK+ KL  AM    GS  +ET VIKG    P    V QVPY  ++L G AL  Q ++W  YGT+EPSA  AI  +    +  DLSD+YFVLLGAGSAMGP   LL LGANI+AIDLDR GIW+RL+     S GT+IFPLK  K Q++L +  E+ A AG NL   TPE+  WL  V   K LVVG+YAYLDGELHV++SLAMDAI++ LT  R+   PAYLCTPTDVHVI   AHDAAA+Q   L LVNL+CKL+  NL  +  L  N  P V   DG  +Y VDG+V +QGPNYALAKR+QHWRAVVAR+  +  VSSNIAPSTAT SV SN+LFA+AY G HFF+P+EVFQQETSNAVM A+L+ D+ +P  PSNP   ++NPL+LF++GS HGG+WRMAY IDSIG  +   YL    +G+L L+ ++
Sbjct:   35 LIWGNQPRVPRDQKLASYSLRIKRAAGSTFGNKGAWAAAVGAVDKAEGLKIEKEKQWRQKYAKYIVRQVQVGLKSPKNAVSVAQGGLEYCYQNFEFIRDGKTYKLGEAMEKFGGSHSYETGVIKGEGKLPKFGPVCQVPYGKKVLEGEALRAQFEQWARYGTVEPSARDAISYLIDNPKVLDLSDKYFVLLGAGSAMGPFLTLLALGANIIAIDLDRQGIWERLIRETRKSPGTLIFPLK--KKQSTLKTDPEVAAQAGGNLFTDTPELRAWLMGVETGKDLVVGAYAYLDGELHVKVSLAMDAIIRDLTRLRK-ATPAYLCTPTDVHVISKEAHDAAAAQHCELSLVNLVCKLSLFNLPGSGYLVKNALPPVRAEDGEEIYFVDGIVGRQGPNYALAKRIQHWRAVVAREVDKVNVSSNIAPSTATVSVTSNKLFALAYKGFHFFKPLEVFQQETSNAVMAAMLIHDIRNPNVPSNPKNKIRNPLELFTYGSLHGGIWRMAYKIDSIGEPAAFLYLFTTPLGMLVLVAFY 562          
BLAST of Ec-27_005150.1 vs. uniprot
Match: A0A139AEM4_GONPJ (Uncharacterized protein n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139AEM4_GONPJ)

HSP 1 Score: 491 bits (1264), Expect = 4.700e-166
Identity = 271/507 (53.45%), Postives = 351/507 (69.23%), Query Frame = 1
Query:   19 PLDGLVWPLVPNSKKAGDRSTTWANKQALAAAIGAVDPALAQRVLDERNWRQKYTKYVYKHVEACLQSKEAAVASSKAGLEWVHNNFEFVREGKSMKLAAAMSSITGS-FETAVIKGTKPKPTET-VLQVPYKDEILTGNALEDQVDKWVSYGTIEPSAGAAIKDVSQKGEWRDLSDRYFVLLGAGSAMGPLKLLLELGANIVAIDLDRPGIWQRLLGLAENSCGTMIFPLKAGKPQASLSSREELCAAAGANLLAHTPEILNWLKTVSPEKPLVVGSYAYLDGELHVRLSLAMDAIVKGLTESRRDVMPAYLCTPTDVHVIPSAAHDAAASQARSLGLVNLLCKLTGNLAMTLTSNVKPAVVGADGGS-LYLVDGLVNKQGPNYALAKRMQHWRAVVARQEYRCKVSSNIAPSTATASVVSNRLFAMAYGGMHFFQPMEVFQQETSNAVMGALLLRDVADPATPSNPTLPLKNPLQLFSFGSFHGGVWRMAYTIDSIGTASVLAYL 1530
            P DGLV+P  P+ K+ G+R +T+ NK A AAAIGA+ PA A+++  E++WR  YTKY+ K VE   +S + A+A +K GL++ +NNFEFVREGK   L  A+ + T   F+T  IKGT  KP    VL+VPYK + L+G+AL  Q+D+W SYGTIE +A   I +V +  +W DLSD+YF LLGAGSAMGP   L+ LGANI+AIDL+R  IW+RL+ +A NS GT+ FPL   + +    S EEL   AG NL   TPEI  W+ +V P+K + VG+YAYLDGELHV++SLAMDAI++ +T ++R    AYLCTPTDVHVI S A  A      S G+  L   L G     +  N +  V   DG   +  V+G+V++QGPNYALAKR+QHWRA+VAR E    VSSNIAPST+TASV  NRLFA AYGGMH F+PMEVF  ETSNAVM ALL+ DV +P + ++P++ L NPL+LF  GSFHGGVWR A+ +++IGT S + YL
Sbjct:    9 PEDGLVFP--PDPKRPGERGSTFGNKGAWAAAIGAISPADAEKIQKEKDWRNNYTKYIIKQVEESARSPQKAIAVAKGGLDYCYNNFEFVREGKVSTLQQALDTYTTPIFKTGFIKGTGEKPKGGYVLKVPYKGKELSGDALLAQLDRWYSYGTIEKTARDYIAEVVKNQQWLDLSDKYFCLLGAGSAMGPFLTLMALGANIIAIDLNRAPIWKRLISVARNSPGTITFPLLGDQDK---MSDEELFEKAGCNLFTQTPEIRTWVLSVYPDKHITVGAYAYLDGELHVKVSLAMDAIIRDMT-TKRKAGAAYLCTPTDVHVITSDAAKAERDNYSSFGVATLFKYLPG-----MPPNFRKPVKTDDGKKEINYVNGIVDRQGPNYALAKRIQHWRAMVARTEGSI-VSSNIAPSTSTASVTHNRLFAWAYGGMHHFKPMEVFAPETSNAVMAALLINDVRNPNSVAHPSVTLDNPLELFREGSFHGGVWRTAFPVNAIGTPSAIVYL 503          
BLAST of Ec-27_005150.1 vs. uniprot
Match: A0A448ZLX2_9STRA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZLX2_9STRA)

HSP 1 Score: 471 bits (1212), Expect = 1.120e-156
Identity = 265/507 (52.27%), Postives = 337/507 (66.47%), Query Frame = 1
Query:   19 PLDGLVWPLVPNSKKAGDRSTTWANKQALAAAIGAVDPALAQRVLDERNWRQKYTKYVYKHVEACLQSKEAAVASSKAGLEWVHNNFEFVR-EGKSMKLAAAMS-SITGSFETAVIKGTKPKPTETVLQVPYKDEILTGNALEDQVDKWVSYGTIEPSAGAAIKDVSQKGEWRDLSDRYFVLLGAGSAMGPLKLLLELGANIVAIDLDRPGIWQRLLGLAENSCGTMIFPLKAGKPQASLSSREELCAAAGANLLAHTPEILNWLKTVSPEKPLVVGSYAYLDGELHVRLSLAMDAIVKGLTESRRDVMPAYLCTPTDVHVIPSAAHDAAASQARSLGLVNLLCKLTGNLAM--TLTSNVKPAVVGADGGSLYLVDGLVNKQGPNYALAKRMQHWRAVVARQEYRCKVSSNIAPSTATASVVSNRLFAMAYGGMHFFQPMEVFQQETSNAVMGALLLRDVADPATPSNPTLPLKNPLQLFSFGSFHGGVWRMAYTIDSIGTASVLAY 1527
            P  G+V+P+    K    RS+T  NK+ LA+A+GAV+P+ A+++   + +R  Y K++   VE   +S EA +  ++AGL+  ++ FEFV  +G ++ +  AMS   T  F T  IKG   K T T+++VPYK  IL G +L+DQV KWV YGTIEPSAG AI        W DLSD+YFVLLGAGSAMGPL +LL LGAN++A+DLDRP IW+RL+GLA+ S GT+ FPLK  + Q+SL S + L AAAG NL  HTP I +WL  + P K   VGSYAYL+G LHV++SLAMDAI + L+E R     AYLCTPTD+H++P  A DA+ S  +  G   LLC     L+    L  N K  V G +GG  Y+++G+   QGPNY LAKRMQHWRAVVAR +  C VSSNIAP+T+T SV  NR FA AY GM +F+P E+F  ETSNAVM A+L  D+  P +  NP   L NP QLFS GSFHGG WR AY +DSIG  SVL Y
Sbjct:  115 PPRGIVFPVEEGKKS---RSSTPVNKEILASAVGAVNPSKAEKIRSAKGYRFTYVKHLTGLVEEQCKSPEACLKIAQAGLDKAYDIFEFVAPDGSAVSVREAMSMKNTEKFCTGFIKGEGAKDT-TMMEVPYKGTILKGQSLKDQVKKWVDYGTIEPSAGEAIIGCVDNPNWCDLSDKYFVLLGAGSAMGPLLVLLALGANVIAVDLDRPNIWKRLIGLAKKSPGTITFPLK--QEQSSLDSDDALYAAAGCNLFTHTPMIRDWLMDLYPGKSFTVGSYAYLNGALHVQVSLAMDAITRDLSEKRPGTSLAYLCTPTDLHLVPKEAWDASVSNFKEYGS-RLLCMFVRLLSSGRLLKKNAKAPVAG-EGGDFYMINGVSVAQGPNYILAKRMQHWRAVVARSKG-CIVSSNIAPATSTVSVTQNRTFAWAYEGMPYFEPYEIFAPETSNAVMSAILFSDLNSPKSVGNPKTSLNNPNQLFSQGSFHGGNWRCAYEVDSIGETSVLIY 612          
BLAST of Ec-27_005150.1 vs. uniprot
Match: A0A1Z5JSJ0_FISSO (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JSJ0_FISSO)

HSP 1 Score: 474 bits (1220), Expect = 1.780e-156
Identity = 264/509 (51.87%), Postives = 335/509 (65.82%), Query Frame = 1
Query:   19 PLDGLVWPLVPNSKKAGDRSTTWANKQALAAAIGAVDPALAQRVLDERNWRQKYTKYVYKHVEACLQSKEAAVASSKAGLEWVHNNFEFVR-EGKSMKLAAAMSSITGS-FETAVIKGTKPKPTETVLQVPYKDEILTGNALEDQVDKWVSYGTIEPSAGAAIKDVSQKGEW--RDLSDRYFVLLGAGSAMGPLKLLLELGANIVAIDLDRPGIWQRLLGLAENSCGTMIFPLKAGKPQASLSSREELCAAAGANLLAHTPEILNWLKTVSPEKPLVVGSYAYLDGELHVRLSLAMDAIVKGLTESRRDVMPAYLCTPTDVHVIPSAAHDAAASQARSLGLVN--LLCKLTGNLAMTLTSNVKPAVVGADGGSLYLVDGLVNKQGPNYALAKRMQHWRAVVARQEYRCKVSSNIAPSTATASVVSNRLFAMAYGGMHFFQPMEVFQQETSNAVMGALLLRDVADPATPSNPTLPLKNPLQLFSFGSFHGGVWRMAYTIDSIGTASVLAY 1527
            P  GL WP+     K G+RS+T  N+  +AAA+ A+D +L Q+ L ER WR  Y K++   VEA   S EAA+ S++AGL+  +  FEFV  +GK++    AMS+     + T  ++G +    +  L+VPY  + L+G  L+DQV  WV YGTIEPSAG AI       +W   + S RYFVLLGAGSAMGPLK+LL LGAN++A+DLDRPGIW+ L+GLA+ S GTM FPLK       + + + LC  AG NL  +TP I +WL  + P K   VGSYAYLDG LHV++SLAMDAI + LTE R++   AYLCTPTD+H+IP  AHDAAA+  +        +   L G     L SNVK  V G  GG  YLV+G+   QGPNYALAKRMQHWRA++AR +  C VSSNIAPST+T SVV NR FA AY GM +F+P E+   + S AVM ALL  D+ DP++ +NP   L NP QLFS+GSFHGG+WR AY +DSIG ASVL Y
Sbjct:  218 PPRGLCWPV----DKKGERSSTEVNRAIVAAALSAMDESLGQKCLKERGWRFGYVKHLRAMVEAQCASPEAAIQSAQAGLDKAYELFEFVYPDGKAVSFKEAMSAKNSEKYHTGFVQG-EGSSKKDKLEVPYNGKQLSGQELKDQVQAWVDYGTIEPSAGEAIIKCVDNPKWFSEEFSKRYFVLLGAGSAMGPLKVLLALGANVIAVDLDRPGIWKHLIGLAKESTGTMTFPLKEDPATFDVKNEDALCERAGCNLFTNTPLIRDWLLDLYPGKSFTVGSYAYLDGALHVQVSLAMDAITRDLTEKRKNTSLAYLCTPTDLHLIPKEAHDAAAANLKEFSKKPYCMFLSLLGG-GKFLRSNVKKPVSGK-GGDYYLVNGISVAQGPNYALAKRMQHWRAIIARSKG-CIVSSNIAPSTSTVSVVHNRTFAWAYEGMPYFKPFEIATPDLSKAVMLALLAYDLNDPSSAANPKTALSNPNQLFSYGSFHGGLWRCAYEVDSIGEASVLLY 718          
BLAST of Ec-27_005150.1 vs. uniprot
Match: A0A7S3W6Z5_9SPIT (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=2 Tax=Choreotrichia TaxID=141411 RepID=A0A7S3W6Z5_9SPIT)

HSP 1 Score: 473 bits (1217), Expect = 3.030e-156
Identity = 251/520 (48.27%), Postives = 338/520 (65.00%), Query Frame = 1
Query:   19 PLDGLVWPLVPNSKKAGD-RSTTWANKQALAAAIGAVDPALAQRVLDERNWRQKYTKYVYKHVEACLQSKEAAVASSKAGLEWVHNNFEFVREGKSMKLAAAMSSITGSFETAVIKGTKPKPTETVLQVPYKDEILTGNALEDQVDKWVSYGTIEPSAGAAIKDVSQKGEWRDLSDRYFVLLGAGSAMGPLKLLLELGANIVAIDLDRPGIWQRLLGLAENSCGTMIFPLKAGKPQASLSSREELCAAAGANLLAHTPEILNWLKTVSPEKPLVVGSYAYLDGELHVRLSLAMDAIVKGLTESRRDVMPAYLCTPTDVHVIPSAAHDAAASQARSLGLVNLLCKLTGNLAMTLTSNVKPAVVGADGGSLYLVDGLVNKQGPNYALAKRMQHWRAVVARQEYRCKVSSNIAPSTATASVVSNRLFAMAYGGMHFFQPMEVFQQETSNAVMGALLLRDVADPATPSNPTLPLKNPLQLFSFGSFHGGVWRMAYTIDSIGTASVLAYLLVGLLSLLKYFLLAF 1575
            P+DGL WP+    ++    RST    K+ LA A+ AVD + A  V  E+ WR KY ++  K VE    S EAA+  + AGL+++++ FEF+R+GK+  L  A++   GSF T  IKG KPKP +  L+VPY  +IL G++L+ Q+DKWV  G  E S G+AI  V+    W DLSDRYFVLLGAG+AMGP ++LL LGANI+A+D+ RP IW+RL+   ++SCGT+ FP+K G  Q S    + L  AAG NL   TPEI NWL+ V+P +   VG YAY+ G+L  R++LAMD I+K L E+R     A+LCTPTD H++P AAH AA +  +   L   +  L  ++      N +  +  + G +LY+VD LV  QGPNYALAKRMQHWRA++AR E    VSSN+APST T SV+ N+LF+  Y  MH F+P E+   E SN+VM ALL+ D+ +P    NP +PL NP Q+FS GSFHGG WR A+T DSIG  SVL Y ++  +  +KY+L A+
Sbjct:   10 PIDGLSWPVTGVDEEGKQARSTQTTGKEILAVALEAVDASAAAAVRSEKGWRFKYRRHFVKSVEVSASSPEAALKVAAAGLDYMYDKFEFIRDGKTYVLRDALAQFKGSFATGFIKGNKPKPNKFELEVPYNGQILKGDSLQRQIDKWVRQGVCELSCGSAISQVANAEPWLDLSDRYFVLLGAGAAMGPFQVLLALGANIIAVDIGRPDIWKRLISQTKDSCGTLTFPMKPGFKQPSTPD-DSLYEAAGCNLFTQTPEIKNWLREVTPSEKACVGGYAYIPGDLFPRVALAMDVIIKELVETR-GASVAFLCTPTDAHLVPPAAHAAAKAAIKKAPLWQKMANLV-SMGKWCVPNARKPITTSAGETLYVVDALVVPQGPNYALAKRMQHWRAMLAR-EAGVIVSSNVAPSTRTYSVMQNKLFSYGYATMHHFKPFEIPGPELSNSVMTALLIHDLNEPMHAGNPKMPLVNPQQIFSQGSFHGGAWRCAFTFDSIGAPSVLLYYVLNFV--VKYYLAAY 523          
BLAST of Ec-27_005150.1 vs. uniprot
Match: A0A7S3V160_9STRA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3V160_9STRA)

HSP 1 Score: 473 bits (1216), Expect = 7.300e-156
Identity = 268/518 (51.74%), Postives = 335/518 (64.67%), Query Frame = 1
Query:   13 SRPLDGLVWPLVPNSKKAGDRSTTWANKQALAAAIGAVDPALAQRVLDERNWRQKYTKYVYKHVEACLQSKEAAVASSKAGLEWVHNNFEFVREGKSMKLAAAMSSITGSFETAVIKGTKPKPTETVLQVPYK-------DEILTGNALEDQVDKWVSYGTIEPSAGAAIKDVSQKGEWRDLSDRYFVLLGAGSAMGPLKLLLELGANIVAIDLDRPGIWQRLLGLAENSCGTMIFPLKAGKPQASLSSREELCAAAGANLLAHTPEILNWLKTVSPEKPLVVGSYAYLDGELHVRLSLAMDAIVKGLTESRRDVMPAYLCTPTDVHVIPSAAHDAAASQARSLG----LVNLLCKLTGNLAMTLTSNVKPAVVGADGGSLYLVDGLVNKQGPNYALAKRMQHWRAVVARQEYRCKVSSNIAPSTATASVVSNRLFAMAYGGMHFFQPMEVFQQETSNAVMGALLLRDVADPATPSNPTLPLKNPLQLFSFGSFHGGVWRMAYTIDSIG-TASVLAYL 1530
            +RP DGLVWP+   ++  G+RST+  NK    A++  VD +LA  +   R+WR  Y KYV K++  CL+S+  A+A +K GL      F FVR+GK+  L  AM+SITG+F T  +KGT  KP    L +PY        ++ L G     Q+D WV  GTIEPSAG  IK   Q   W DLSDRYFVLLGA SAMGPL  LL LGANI+AID+DR G+W+ L+  A  SCGT+ FPL   KPQ+ +SS EEL   AG+NLLA TPEI NW+ +V  ++PL +G+Y YLDG LHV+LSLA D+I++ L   R+D   A+LCTPTD H IP  A++AAA+  +S      +V LL  + G   M     VK A+   +   LYLVDG+V  QGPNY LAKR+QHWRAV+A       VSSNIAPSTAT SVVSN  FA AY G   F+PMEV  QETS+AVM ALL+ D+ +  + +NP   L NP QLF  GSFHGGVWR AY  D+IG TA+V  YL
Sbjct:  209 ARPADGLVWPVT--NEATGERSTSVTNKAIWEASVRGVDNSLADSIKKTRSWRFGYVKYVEKNLRCCLKSEANALAVAKQGLSAAKEKFLFVRDGKTQSLKDAMNSITGTFHTGFVKGTGSKP-NFKLTIPYTKFGSNNPEKQLEGVEAMKQIDAWVEAGTIEPSAGDGIKMCIQNPAWMDLSDRYFVLLGATSAMGPLNALLALGANIIAIDIDREGVWKTLIEKARASCGTLTFPLS--KPQSEISSDEELFKCAGSNLLAKTPEIANWICSVHTDRPLTIGNYTYLDGALHVQLSLACDSIMERLCSERKDTSIAFLCTPTDCHAIPKEANEAAAANYKSRPSWQKVVELL--IGGTNIMGAKQLVKNALKPVEESGLYLVDGIVAAQGPNYGLAKRLQHWRAVIAHSNGHV-VSSNIAPSTATKSVVSNAQFAAAYNGFKLFKPMEVMYQETSSAVMLALLINDLRNLNSVANPKNKLDNPFQLFQSGSFHGGVWRCAYKCDAIGVTAAVYFYL 718          
BLAST of Ec-27_005150.1 vs. uniprot
Match: A0A7S2SGL6_9STRA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SGL6_9STRA)

HSP 1 Score: 470 bits (1209), Expect = 1.100e-154
Identity = 263/546 (48.17%), Postives = 334/546 (61.17%), Query Frame = 1
Query:   10 SSRPLDGLVWPLVPNSKKAGDRSTTWANKQALAAAIGAVDPALAQRVLDERNWRQKYTKYVYKHVEACLQSKEAAVASSKAGLEWVHNNFEFVREGKSMKLAAAMSSITGSFETAVIKGTKPKPTETVLQVPY--------------KDEILTGNALEDQVDKWVSYGTIEPSAGAAIKDVSQKGEWRDLSDRYFVLLGAGSAMGPLKLLLELGANIVAIDLDRPGIWQRLLGLAENSCGTMIFPLKAGKPQASLSSREELCAAAGANLLAHTPEILNWLKTVSPEKPLVVGSYAYLDGELHVRLSLAMDAIVKGLTESRRDVMPAYLCTPTDVHVIPSAAHDAA-ASQARSLGLVNLLCKLTGNLAMTLTSNVKPAVVGADGGSLYLVDGLVNKQGPNYALAKRMQHWRAVVARQEYRCKVSSNIAPSTATASVVSNRLFAMAYGGMHFFQPMEVFQQETSNAVMGALLLRDVADPATPSNPTLPLKNPLQLFSFGSFHGGVWRMAYTIDSIGTASVLAYLLVGLLSLLKYFLLAFVVGFAAMKA 1602
            S RPL+GLVWP+   + K  +RST+  NK     ++  VD A A     E+NWR  Y  +V  HV   L     A+A ++AGL   H  FEF R   +  L  AM  I+GSF T  I GT  +  +  L +PY              +++++   AL  Q++ WV  G IEP  G A++  + K  W DLS+ YF+LLGA SAMGP+K LL LGAN++AIDLDRP IW++L  LA  SCGT+IFP++ G     LS  ++L A +GANLL HTPEI NWL  V PEK + VG+Y YLDG LHV+LSLA DAI+  L   R ++  A+LCTPTD H IP AAHDAA A +A +     L   L GN       ++ P    + G  +YLVDG+V  QGPNY LAKR+QHWRA++ R      +SSNIAPSTATASVV N  FA AYGGMH FQP+EV  QETSNA+MGALLL DV +     NP +PL NPL++F +GSFHGGVWR  + + +IG  S LAY L       K++  A   G AA+ A
Sbjct:  209 SPRPLEGLVWPVT--NPKTQERSTSRTNKTIWVQSVEGVDAAAATAAKKEKNWRYGYVAHVETHVRLSLADTTNALAIAEAGLGAAHEAFEFKRGSDTFSLRQAMEKISGSFGTHKITGTAQRDPKASLAIPYGGRRGRPYYEGLEQRNDLIEDKALLAQINVWVEDGVIEPDCGEALRLCATKKAWLDLSEHYFILLGATSAMGPIKFLLSLGANVIAIDLDRPQIWKKLFQLARESCGTLIFPVREGTRVEGLSE-DDLAAVSGANLLQHTPEIANWLCQVCPEKKITVGNYTYLDGALHVQLSLACDAIIAKLAAVRSELAIAFLCTPTDCHPIPKAAHDAARAKRAAAPFWQKLSPLLVGN-------DIAPVTEKSSGDQIYLVDGVVAAQGPNYILAKRIQHWRAIIERSRGHV-ISSNIAPSTATASVVHNPQFAAAYGGMHLFQPLEVMFQETSNAIMGALLLHDVQNERAAGNPKVPLSNPLRMFEYGSFHGGVWRCGFKMGTIGEMSALAYYL-------KFYWFAMGAGSAAVAA 736          
BLAST of Ec-27_005150.1 vs. uniprot
Match: A0A7S4BKX7_CHRCT (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BKX7_CHRCT)

HSP 1 Score: 468 bits (1205), Expect = 1.340e-154
Identity = 262/528 (49.62%), Postives = 341/528 (64.58%), Query Frame = 1
Query:   25 DGLVWPLVPNSKKAGDRSTTWANKQALAAAIGAVDPALAQRVLDERNWRQKYTKYVYKHVEACLQSKEAAVASSKAGLEWVHNNFEFVREGKSMKLAAAMSSITGSFETAVIKGTKPKPTETVLQVPYKDEILTGNALEDQVDKWVSYGTIEPSAGAAIKDVSQKGEWRDLSDRYFVLLGAGSAMGPLKLLLELGANIVAIDLDRPGIWQRLLGLAENSCGTMIFPLKAGKPQASLSSREELCAAAGANLLAHTPEILNWLKTVSPEKPLVVGSYAYLDGELHVRLSLAMDAIVKGLTESRRDVMPAYLCTPTDVHVIPSAAHDAAASQARSLGLVNLLCKLTGNLAMTLTSNVKPAVVGADGGSLYLVDGLVNKQGPNYALAKRMQHWRAVVARQEYRCKVSSNIAPSTATASVVSNRLFAMAYGGMHFFQPMEVFQQETSNAVMGALLLRDVADPATPSNPTLPLKNPLQLFSFGSFHGGVWRMAYTIDSIGTASVLAYLLVGLLSLLKYFLLAF----VVGFAAM 1596
            +GL WP+     K   RST    K+ L AA+ AVD   A  V  ER WR KY K+  K VE   +S E A+  + AGL++++++FEF+R+G+   L  A+    G F T V+ G KPKP    L VPY    LTG+AL+ Q+DKWV  G  E S GAAI  V+Q   W DLSDRYFVLLGAG+AMGPL++LL  GAN++A+DL+   IW+RL+GLA++SCGT+ FPLK G  Q+ LS  +EL  AAG NL   TPEI NWL TV P K L VG YAYL G+L  R++LAMD I+K LTE R+  + A+LCTPTD H++P  A++AA    R   L   +  L     M + ++ +P    A G +LY+ D LV+ QGPNYALAKR+QHWRA++AR E  C VSSN+APST T SV  N+ FA AY  MH F+P E+   ETSNAVM ALL+ D+  P    N  +P+ NP Q+FS G+FHGG WR  +T DSIG  +VL Y +  L+  +K +L+A+     VG+AA+
Sbjct:    7 EGLCWPVTSTDDKGEVRSTQDTGKRILEAALRAVDDEAADAVHRERGWRFKYKKHFVKSVEISAKSPENALKVAGAGLDYMYDHFEFIRDGQRHVLREALRIYKGGFGTGVVAGQKPKPDSFELGVPYNGTTLTGDALQAQLDKWVRLGVCELSCGAAISQVAQAKPWLDLSDRYFVLLGAGAAMGPLQVLLAHGANVIAVDLNLDKIWRRLIGLAKDSCGTLTFPLKEGCEQSRLSD-DELYTAAGCNLFTQTPEIKNWLLTVHPGKQLCVGGYAYLMGDLFPRVALAMDVIIKELTEKRKASV-AFLCTPTDCHLVPVGAYNAAKDNLRKAPLWQKMIGLLSMGKMCVKNSRRPVTTAA-GETLYVCDALVSAQGPNYALAKRLQHWRAMLAR-EIGCVVSSNVAPSTRTQSVTQNKNFAYAYETMHNFKPYEIPGPETSNAVMTALLIYDLNTPMQNGNKLMPIANPQQIFSQGAFHGGTWRCGFTFDSIGVPAVLLYYVQNLV--VKNYLIAYNAVQTVGWAAV 528          
The following BLAST results are available for this feature:
BLAST of Ec-27_005150.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LB55_ECTSI0.000e+0100.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z6A9_9STRA8.620e-20760.72Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7TMF0_9STRA2.790e-17854.24Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A139AEM4_GONPJ4.700e-16653.45Uncharacterized protein n=1 Tax=Gonapodya prolifer... [more]
A0A448ZLX2_9STRA1.120e-15652.27Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
A0A1Z5JSJ0_FISSO1.780e-15651.87Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
A0A7S3W6Z5_9SPIT3.030e-15648.27Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
A0A7S3V160_9STRA7.300e-15651.74Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
A0A7S2SGL6_9STRA1.100e-15448.17Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
A0A7S4BKX7_CHRCT1.340e-15449.62Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_27contigchr_27:4662658..4667546 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score1103.6
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D8LB55
Length1680
Hectar predicted targeting categoryother localisation
Gene idEc-27_005150.1
EggNOG OGs2A24T@1,2RY25@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-27_005150Ec-27_005150Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_27 4662658..4667546 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_005150.1Ec-27_005150.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_27 4662658..4667546 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_005150.1.1Ec-27_005150.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 4662658..4663056 +
Ec-27_005150.1.2Ec-27_005150.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 4665212..4665615 +
Ec-27_005150.1.3Ec-27_005150.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 4665991..4666126 +
Ec-27_005150.1.4Ec-27_005150.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 4666649..4667038 +
Ec-27_005150.1.5Ec-27_005150.1.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_27 4667196..4667546 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-27_005150.1CDS:Ec-27_005150.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_27 4662658..4663056 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-27_005150.1 ID=Ec-27_005150.1|Name=Ec-27_005150.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=560bp
MPPSSRPLDGLVWPLVPNSKKAGDRSTTWANKQALAAAIGAVDPALAQRV
LDERNWRQKYTKYVYKHVEACLQSKEAAVASSKAGLEWVHNNFEFVREGK
SMKLAAAMSSITGSFETAVIKGTKPKPTETVLQVPYKDEILTGNALEDQV
DKWVSYGTIEPSAGAAIKDVSQKGEWRDLSDRYFVLLGAGSAMGPLKLLL
ELGANIVAIDLDRPGIWQRLLGLAENSCGTMIFPLKAGKPQASLSSREEL
CAAAGANLLAHTPEILNWLKTVSPEKPLVVGSYAYLDGELHVRLSLAMDA
IVKGLTESRRDVMPAYLCTPTDVHVIPSAAHDAAASQARSLGLVNLLCKL
TGNLAMTLTSNVKPAVVGADGGSLYLVDGLVNKQGPNYALAKRMQHWRAV
VARQEYRCKVSSNIAPSTATASVVSNRLFAMAYGGMHFFQPMEVFQQETS
NAVMGALLLRDVADPATPSNPTLPLKNPLQLFSFGSFHGGVWRMAYTIDS
IGTASVLAYLLVGLLSLLKYFLLAFVVGFAAMKAKDGENPLEALDGVKDS
VLGLFKGEL*
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spliced messenger RNA

>Ec-27_005150.1 ID=Ec-27_005150.1|Name=Ec-27_005150.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1680bp|location=Sequence derived from alignment at chr_27:4662658..4667546+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGCCGCCGTCTTCGCGTCCGCTGGACGGCCTGGTGTGGCCGCTCGTGCC
GAACTCCAAGAAAGCCGGCGACCGCAGTACCACGTGGGCGAACAAGCAGG
CGCTGGCAGCGGCGATCGGTGCTGTGGACCCCGCGCTGGCGCAGAGGGTT
CTGGACGAGCGCAACTGGCGGCAGAAGTACACCAAGTACGTGTACAAGCA
CGTGGAGGCGTGCCTGCAGAGCAAGGAGGCGGCCGTGGCCAGCAGCAAGG
CGGGCCTGGAGTGGGTGCACAACAACTTCGAGTTCGTGCGGGAGGGCAAG
AGCATGAAGCTCGCCGCGGCCATGTCGAGCATCACGGGGTCCTTCGAGAC
CGCCGTCATCAAGGGCACCAAGCCCAAGCCCACGGAGACAGTGTTGCAGG
TGCCCTACAAAGATGAGATCCTGACGGGAAATGCCCTCGAAGACCAGGTG
GACAAGTGGGTCTCCTATGGCACCATCGAGCCCAGCGCGGGGGCCGCCAT
CAAGGACGTCTCCCAGAAGGGGGAGTGGAGGGACCTAAGCGACAGGTATT
TCGTTCTTCTCGGCGCGGGCTCGGCCATGGGTCCGCTGAAGCTGCTGCTG
GAGCTCGGCGCCAACATCGTGGCGATCGACTTGGATCGCCCCGGGATCTG
GCAGCGGTTGCTAGGCCTGGCGGAAAACTCGTGCGGGACGATGATCTTCC
CGCTCAAGGCGGGGAAGCCGCAGGCGTCTCTCTCTAGCAGGGAGGAGCTG
TGCGCGGCGGCCGGGGCTAACCTCCTGGCGCACACCCCGGAGATTTTGAA
CTGGCTGAAGACGGTCAGCCCAGAAAAGCCGCTGGTAGTGGGTTCTTACG
CCTATCTGGACGGCGAGCTGCACGTTCGGCTGTCTCTCGCCATGGACGCG
ATCGTGAAGGGGCTGACGGAGTCACGGCGCGACGTGATGCCGGCATACCT
TTGCACGCCGACGGACGTCCACGTCATCCCGTCGGCGGCCCACGACGCCG
CCGCTAGCCAGGCCCGATCTCTGGGTCTCGTGAACCTCCTCTGCAAGCTC
ACAGGCAACCTGGCGATGACCCTGACGTCCAACGTGAAGCCCGCGGTAGT
GGGCGCGGACGGCGGCAGCTTGTACCTCGTGGATGGGCTCGTGAACAAGC
AGGGGCCCAACTACGCGCTGGCCAAGCGGATGCAGCACTGGCGGGCGGTG
GTGGCGAGGCAGGAGTACCGGTGCAAGGTGTCGAGCAACATCGCTCCGTC
GACGGCGACGGCCTCGGTCGTGTCCAACAGGCTCTTCGCGATGGCCTACG
GAGGCATGCACTTCTTCCAGCCCATGGAGGTGTTCCAGCAGGAGACGTCA
AACGCGGTCATGGGGGCGCTGCTGCTGCGCGACGTGGCCGACCCCGCCAC
CCCTTCCAACCCCACGCTCCCGCTCAAGAACCCCCTTCAGCTCTTCTCTT
TCGGGTCGTTCCACGGCGGCGTGTGGCGCATGGCATACACGATCGACTCG
ATCGGGACCGCGTCAGTCCTGGCGTACCTCCTGGTGGGGTTGCTGTCGCT
GTTGAAGTACTTCCTCCTGGCCTTTGTCGTCGGTTTCGCCGCGATGAAGG
CGAAGGACGGGGAGAACCCGCTGGAGGCGCTTGACGGCGTCAAGGACAGC
GTGTTGGGCCTGTTCAAGGGGGAACTGTGA
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protein sequence of Ec-27_005150.1

>Ec-27_005150.1 ID=Ec-27_005150.1|Name=Ec-27_005150.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=560bp
MPPSSRPLDGLVWPLVPNSKKAGDRSTTWANKQALAAAIGAVDPALAQRV
LDERNWRQKYTKYVYKHVEACLQSKEAAVASSKAGLEWVHNNFEFVREGK
SMKLAAAMSSITGSFETAVIKGTKPKPTETVLQVPYKDEILTGNALEDQV
DKWVSYGTIEPSAGAAIKDVSQKGEWRDLSDRYFVLLGAGSAMGPLKLLL
ELGANIVAIDLDRPGIWQRLLGLAENSCGTMIFPLKAGKPQASLSSREEL
CAAAGANLLAHTPEILNWLKTVSPEKPLVVGSYAYLDGELHVRLSLAMDA
IVKGLTESRRDVMPAYLCTPTDVHVIPSAAHDAAASQARSLGLVNLLCKL
TGNLAMTLTSNVKPAVVGADGGSLYLVDGLVNKQGPNYALAKRMQHWRAV
VARQEYRCKVSSNIAPSTATASVVSNRLFAMAYGGMHFFQPMEVFQQETS
NAVMGALLLRDVADPATPSNPTLPLKNPLQLFSFGSFHGGVWRMAYTIDS
IGTASVLAYLLVGLLSLLKYFLLAFVVGFAAMKAKDGENPLEALDGVKDS
VLGLFKGEL*
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mRNA from alignment at chr_27:4662658..4667546+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-27_005150.1 ID=Ec-27_005150.1|Name=Ec-27_005150.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=4889bp|location=Sequence derived from alignment at chr_27:4662658..4667546+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGCCGCCGTCTTCGCGTCCGCTGGACGGCCTGGTGTGGCCGCTCGTGCC GAACTCCAAGAAAGCCGGCGACCGCAGTACCACGTGGGCGAACAAGCAGG CGCTGGCAGCGGCGATCGGTGCTGTGGACCCCGCGCTGGCGCAGAGGGTT CTGGACGAGCGCAACTGGCGGCAGAAGTACACCAAGTACGTGTACAAGCA CGTGGAGGCGTGCCTGCAGAGCAAGGAGGCGGCCGTGGCCAGCAGCAAGG CGGGCCTGGAGTGGGTGCACAACAACTTCGAGTTCGTGCGGGAGGGCAAG AGCATGAAGCTCGCCGCGGCCATGTCGAGCATCACGGGGTCCTTCGAGAC CGCCGTCATCAAGGGCACCAAGCCCAAGCCCACGGAGACAGTGTTGCAGG TGCGATGCCGTGTGTGTGTGTTGGGCGCGATGAGTTGCATACGACTGCTG CTACAACTGCTGCTGGCAACTTTTGTAACGTTGGGGGCGTGCGTCCGCAT GCATGTTGCAGACGCCACTGCTTGTACAAGTAGCGGCTGCTGGGCTGATC TTCATTGGAAATGTCGGCTGCTGCTGCTGCGTCCCAGAGGAGAGCGCTCA TGTGTTGCTTTCGCAATCCTTTTCGCGTCCAAGGATATTTCAAATAGGTC TCTTGCACTCGAATGCGCCATAAGCGGGCAATCCAAGAAAAATCCCTGCT CCTGATAGATCTTCTTTCACCTCAATGCACTTGATTAGAGGAAGCAACAC AGGGAGTATCCATGTTCGATGCTCATTGAAGATTAGGCTGTTTGGTTGGG TGTTGACCAGTCGCGTGTGCATGTATGTTCAGCAGAAGTGCATCGATCGA TGATGATGTGGAGGATGATAACGCGCGGAGAGATTCGGATCTATTGAAGA GAGCGCCCAACACCCATTCCTCGAGACTTCATCAATTGTACATACATCGT ACAGCAGTAACCGTGAGCTAGACTGGTATGCACGTCTGTCTGCGGGAGAA CGAGCGACACAAGACACCTGCTTCTGTTCTGCATCGCCACCATCACAAAA AAATGCATAGACTGGTTTGGTGTGTTGTTGATATAATGGGTGGGTGTGGA GTTAATGCGAGTGTGTCATCGTAACTCGCTTCGCTCGAAGGCACTTCACG GTATTTCGGGCGTGGTGCAGTGTGCGGTCCCAGTGCGGGTCGACGTGCAT GTACTCAACGGGAGTTCGTGCGCAGGCAATGTATGCCTCCCCCTCTCGAG GAAATCGCTTTGTTCACTGGTGTGGCTCTCTTCGCTCGTTGACACTTGGC TGTATGGGACAAGAGGATTAATCGTTCGAACGCTCGGCAAGTGCATACTC GCCCTCGATACGTCTTGCCGCACCCGAACCGTTGTACAGTACCCCAGGCC ACATACCCATCCACTCGCCTGGGGCATTGTACGTCTGTCTTTCATCCCAG AGAGTAGCGTACGCAACTCCCCTACCCCTCACGTCAATCGCCACCATCAC ATAAAAAACATGGATGCCGTCATGCCGTCGGAGGGATCGCGGCCGATTTG CCGTTACCCCGCTTTTCGAGCCGCAGTTCACATTTCCATGGGTCCCATGT GTACCTTTCGAGCAGAGGGAAAAGCAATACCAAGTGCATAAACTTTGAGG GAGCGACTGCTGTTTTATAGTGGCATCAATAAACGCTGAACACAAACACA GGATTGACCCCGATGTAGCGACTCCCTGTTTGGCGACATCCCATGTGTAG GGGTTACAATACCTCGTGGCACCGATCCACCGCGGGTTGTAACAGTCGAA CGATCGGGTCGCCCCCACGACAGCAACTTTTTGAGCTTTTTTCAGCTATG CATAGCAATATCGGTCATAGATTCTATGTTTTGCGGAGATCTCGCAGTCT TTCATGCACGCGTAAAGAGAAGCACACACCGCGGGCCGCACCGTACACAT CAACGCACCATGCCGTGCGCCGCGGTGGAGAGTAGCGCACAATCTTCCGG ATGTCGCACTGGATCCAACCGAGGAGCATGATTGGTCATGGTGGCTGTGG TGGACGTACACACGCACGACATTGCGGGGAGGTGGAGGATCCAGATATCG ACGGCGAGATGCAGCGCATTGTCAAGCTTGTGCACCCCAAGAAACGGATT TAGTACGTGTACTGTGGCCATGTCTGAACAAATAGTTGAGCACGCGGGCT TAACAACACCATACACAGGACACACTCTTGGGTACTGCTGTTGAGATATT TTTGAAAGCAGATCCGGCGGTAGAACAGCAGCCTCTGCTTTTCATTGGCA TTTTTTTGCACATGCCGGAGATTGTTTAATCCGGGTATGAAACGGCACAA AGGATCAGCAGCAACACAAGACCACGCCATTGCCACACCCTGACACCTAC CCCGACCGCAGCAAGGTTACAGCACGCTGACGACGTTGGGCAAGCAGGCC TTCGGGACGGCGCCTGTATTCTCAAGCAACGCAACACCATTTCGGCGCTC ACGCATCTCTGCTCTCCCCTTGTGCCTGTTCAACGCTCCCCCACCCCCCC ACAGGTGCCCTACAAAGATGAGATCCTGACGGGAAATGCCCTCGAAGACC AGGTGGACAAGTGGGTCTCCTATGGCACCATCGAGCCCAGCGCGGGGGCC GCCATCAAGGACGTCTCCCAGAAGGGGGAGTGGAGGGACCTAAGCGACAG GTATTTCGTTCTTCTCGGCGCGGGCTCGGCCATGGGTCCGCTGAAGCTGC TGCTGGAGCTCGGCGCCAACATCGTGGCGATCGACTTGGATCGCCCCGGG ATCTGGCAGCGGTTGCTAGGCCTGGCGGAAAACTCGTGCGGGACGATGAT CTTCCCGCTCAAGGCGGGGAAGCCGCAGGCGTCTCTCTCTAGCAGGGAGG AGCTGTGCGCGGCGGCCGGGGCTAACCTCCTGGCGCACACCCCGGAGATT TTGAACTGGTGAGGGGGCAGCGGAAGACGGGGGGAGACCCAAGAAGAGAA AGCACGGGGGCGTTGGCGGGGGGGATAGGAGAAAGATGGGGATACGGGAG AGTAATGTACAGAGCTTGGGCGGATACAACCGATGTGCAGACGCTGTGGT TGTGTGGTAAATTCGCCTTGGGTGATGCCGGTGAACATGCACTTCTTGTC GCACCCGTCCTCTCAGACAGCATGGTATTCTCCTGTCATTGCTTCGCTAT ATGTAAAACGGAAGGGGTGACACTGCACACACCGTAAACCACCCCATTTT AGTTCTGTGCCCAAAGAACACCCTGGCGCGACCAGACCCCCCCCTCAACC CGACCGATGACTTTTGTGCCTTTTCATCCAAAGGCTGAAGACGGTCAGCC CAGAAAAGCCGCTGGTAGTGGGTTCTTACGCCTATCTGGACGGCGAGCTG CACGTTCGGCTGTCTCTCGCCATGGACGCGATCGTGAAGGGGCTGACGGA GTCACGGCGCGACGTGATGGTGAGCGGTTGTAAAGAACACGGTTGCGATA TCGGTACAGCGGTGGTGGTGCCTGAATAGTGCCGGTATGTGCCCGCCAGA GTCGCCAGCATTATTCAGAGAAGGAGGCAACTTGAATATCCCATAATTGT AGTGCGATGTCACCGGCATGTAGTACGGACAGTGGCACTATTCAGTGAAG GGCCCCGCTGCTACCTGCAGTATCTACCCAAGGCTTTTCGTTGGCTGGTG GTCCTGAGGCGGTGAAGGTAGAAGTGGCGACCGTGCTTGAGAACTGGTTG GGTCGTCAACAACCGAGAGCTTCCAACCAATACGCTCAGAAATGTCTCTC TATCCATGCATACCACCGTTGACACTTTTTTGTGATCAACGGTCCCATTG CCGTAAGGTTGTGAAGCGACCAAATGAGCCTTCGCCCCGCCCGGGCGCGC GTTCCATGTAACAACCGTTCGCGACGCGTGCTTATGGTCCCCTTTCGCGC CCCGCGTCTGTCCTTCCCCCCCCAAATGCCCTCCCTCCCAGCCGGCATAC CTTTGCACGCCGACGGACGTCCACGTCATCCCGTCGGCGGCCCACGACGC CGCCGCTAGCCAGGCCCGATCTCTGGGTCTCGTGAACCTCCTCTGCAAGC TCACAGGCAACCTGGCGATGACCCTGACGTCCAACGTGAAGCCCGCGGTA GTGGGCGCGGACGGCGGCAGCTTGTACCTCGTGGATGGGCTCGTGAACAA GCAGGGGCCCAACTACGCGCTGGCCAAGCGGATGCAGCACTGGCGGGCGG TGGTGGCGAGGCAGGAGTACCGGTGCAAGGTGTCGAGCAACATCGCTCCG TCGACGGCGACGGCCTCGGTCGTGTCCAACAGGCTCTTCGCGATGGCCTA CGGAGGCATGCACTTCTTCCAGCCCATGGAGGTGAGTATTGCCACGGGAG AGAGGTAGCGCTGCTTCTCTGCAGGCCAAGCTGTTACAGGGGGGGCACAC AGGGTATGGTGCAGACCGTTTGTTTGGCTACATATCCGGAACGTTTCTCA CCAGATCCCGCTCCCTCCCTCCCCCCACGCGCCCGCAGGTGTTCCAGCAG GAGACGTCAAACGCGGTCATGGGGGCGCTGCTGCTGCGCGACGTGGCCGA CCCCGCCACCCCTTCCAACCCCACGCTCCCGCTCAAGAACCCCCTTCAGC TCTTCTCTTTCGGGTCGTTCCACGGCGGCGTGTGGCGCATGGCATACACG ATCGACTCGATCGGGACCGCGTCAGTCCTGGCGTACCTCCTGGTGGGGTT GCTGTCGCTGTTGAAGTACTTCCTCCTGGCCTTTGTCGTCGGTTTCGCCG CGATGAAGGCGAAGGACGGGGAGAACCCGCTGGAGGCGCTTGACGGCGTC AAGGACAGCGTGTTGGGCCTGTTCAAGGGGGAACTGTGA
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Coding sequence (CDS) from alignment at chr_27:4662658..4667546+

>Ec-27_005150.1 ID=Ec-27_005150.1|Name=Ec-27_005150.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1680bp|location=Sequence derived from alignment at chr_27:4662658..4667546+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGCCGCCGTCTTCGCGTCCGCTGGACGGCCTGGTGTGGCCGCTCGTGCC
GAACTCCAAGAAAGCCGGCGACCGCAGTACCACGTGGGCGAACAAGCAGG
CGCTGGCAGCGGCGATCGGTGCTGTGGACCCCGCGCTGGCGCAGAGGGTT
CTGGACGAGCGCAACTGGCGGCAGAAGTACACCAAGTACGTGTACAAGCA
CGTGGAGGCGTGCCTGCAGAGCAAGGAGGCGGCCGTGGCCAGCAGCAAGG
CGGGCCTGGAGTGGGTGCACAACAACTTCGAGTTCGTGCGGGAGGGCAAG
AGCATGAAGCTCGCCGCGGCCATGTCGAGCATCACGGGGTCCTTCGAGAC
CGCCGTCATCAAGGGCACCAAGCCCAAGCCCACGGAGACAGTGTTGCAGG
TGCCCTACAAAGATGAGATCCTGACGGGAAATGCCCTCGAAGACCAGGTG
GACAAGTGGGTCTCCTATGGCACCATCGAGCCCAGCGCGGGGGCCGCCAT
CAAGGACGTCTCCCAGAAGGGGGAGTGGAGGGACCTAAGCGACAGGTATT
TCGTTCTTCTCGGCGCGGGCTCGGCCATGGGTCCGCTGAAGCTGCTGCTG
GAGCTCGGCGCCAACATCGTGGCGATCGACTTGGATCGCCCCGGGATCTG
GCAGCGGTTGCTAGGCCTGGCGGAAAACTCGTGCGGGACGATGATCTTCC
CGCTCAAGGCGGGGAAGCCGCAGGCGTCTCTCTCTAGCAGGGAGGAGCTG
TGCGCGGCGGCCGGGGCTAACCTCCTGGCGCACACCCCGGAGATTTTGAA
CTGGCTGAAGACGGTCAGCCCAGAAAAGCCGCTGGTAGTGGGTTCTTACG
CCTATCTGGACGGCGAGCTGCACGTTCGGCTGTCTCTCGCCATGGACGCG
ATCGTGAAGGGGCTGACGGAGTCACGGCGCGACGTGATGCCGGCATACCT
TTGCACGCCGACGGACGTCCACGTCATCCCGTCGGCGGCCCACGACGCCG
CCGCTAGCCAGGCCCGATCTCTGGGTCTCGTGAACCTCCTCTGCAAGCTC
ACAGGCAACCTGGCGATGACCCTGACGTCCAACGTGAAGCCCGCGGTAGT
GGGCGCGGACGGCGGCAGCTTGTACCTCGTGGATGGGCTCGTGAACAAGC
AGGGGCCCAACTACGCGCTGGCCAAGCGGATGCAGCACTGGCGGGCGGTG
GTGGCGAGGCAGGAGTACCGGTGCAAGGTGTCGAGCAACATCGCTCCGTC
GACGGCGACGGCCTCGGTCGTGTCCAACAGGCTCTTCGCGATGGCCTACG
GAGGCATGCACTTCTTCCAGCCCATGGAGGTGTTCCAGCAGGAGACGTCA
AACGCGGTCATGGGGGCGCTGCTGCTGCGCGACGTGGCCGACCCCGCCAC
CCCTTCCAACCCCACGCTCCCGCTCAAGAACCCCCTTCAGCTCTTCTCTT
TCGGGTCGTTCCACGGCGGCGTGTGGCGCATGGCATACACGATCGACTCG
ATCGGGACCGCGTCAGTCCTGGCGTACCTCCTGGTGGGGTTGCTGTCGCT
GTTGAAGTACTTCCTCCTGGCCTTTGTCGTCGGTTTCGCCGCGATGAAGG
CGAAGGACGGGGAGAACCCGCTGGAGGCGCTTGACGGCGTCAAGGACAGC
GTGTTGGGCCTGTTCAAGGGGGAACTGTGA
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Synonyms
The feature 'Ec-27_005150.1' has the following synonyms
Synonym
Esi0000_0251
Esi_0000_0251