Ec-27_005050.2 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Ec-27_005050.2
Unique Name	Ec-27_005050.2
Type	mRNA
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	100

Homology

The following BLAST results are available for this feature:

BLAST of Ec-27_005050.2 vs. uniprot

BLAST of Ec-27_005050.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0


Match Name	E-value	Identity	Description

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_27	contig	chr_27:4574542..4588160 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Properties


Property Name	Value
Length	1312
Hectar predicted targeting category	other localisation
Gene id	Ec-27_005050.2

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-27_005050	Ec-27_005050	Ectocarpus species7 Ec32 male_plus_femaleSDR	gene	chr_27 4574542..4588160 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-27_005050.2.2	Ec-27_005050.2.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_27 4574542..4575291 -
Ec-27_005050.2.1	Ec-27_005050.2.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_27 4587599..4588160 -

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-27_005050	3UTR:Ec-27_005050.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	three_prime_UTR	chr_27 4574542..4575197 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-27_005050.2	CDS:Ec-27_005050.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	CDS	chr_27 4575198..4575291 -

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-27_005050	5UTR:Ec-27_005050.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	five_prime_UTR	chr_27 4587805..4588160 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-27_005050.2	Ec-27_005050.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	polypeptide	chr_27 4575198..4587804 -

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at chr_27:4574542..4588160-
coding sequence from alignment at chr_27:4574542..4588160-

mRNA sequence

>Ec-27_005050.2 ID=Ec-27_005050.2|Name=Ec-27_005050.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=100bp
MRSTGLLVQRWHRGTQSTRVGERGWHRGKRSKGLRAPKWHRGKQSIRAGR
APELGWYREVQSTRAGEQGWHRGKRSMGQRVQPFGLRWVEGSIRVGERR*

spliced messenger RNA

>Ec-27_005050.2 ID=Ec-27_005050.2|Name=Ec-27_005050.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1312bp|location=Sequence derived from alignment at chr_27:4574542..4588160- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
CTCACCGGGGGATGCGGTCCACGGGGCTGCCGGTGCCCAGGTAGCTCCGG
GGGATGCCGTCCACTCGCGTTGGGGGGCGGGTGTGGCACCGGGGGATGCG
GTCCAAGGGGCTGCTGGCGCAAAGGTGGCACCGGGGGACGCAGTCCACTC
GCGTTGGGGAGCGGGGGTGGCACCGGGGGATGCGGTCCAAGGGGCTGCTG
GTGCAACGGTGGCACCGGGGGACGCAGTCCACTCGCGTTGGGGAGCGGGG
GTGGCACCGGGGGAAGCAGTCCATTCGCGTAGGGCGGGCACCGGAGCTAG
GGTGGTACCGGGGGAAGCGGTCCATTCGCGTTGGGGGGCGGGGGTAGCAC
CGGGGGATGCGGTCCACGGGGCTGCTGGTGCAAAGGTGGCACCGGGGGAC
GCAGTCCACTCGCGTTGGGGAGCGGGGGTGGCACCGGGGGAAGCGGTCCA
AGGGGCTGCGGGCGCCCAAGTGGCACCGGGGGAAGCAGTCCATTCGCGCA
GGGCGGGCACCGGAGCTTGGGTGGTACCGGGAGGTGCAGTCCACTCGCGC
TGGGGAGCAGGGGTGGCACCGGGGGAAGCGGTCCATGGGGCAGCGGGTGC
AACCGTTTGGACTTCGGTGGGTGGAGGGGTCCATTCGCGTTGGGGAGCGG
CGGTAGCACCGGGGGAAGCAGTCCACGGGGCAGCGGGTGCCCATGTGGCA
CCGGGGGAAGCGGTCCACGGGGCCGCGGGTGCCCATGTGGCACCGGGGGA
TGCAGTCCACTCACGTTGGGCAGCGGGTGCGACTGTTTGCACTTCGGTGA
GGGGAGGGGTCCAATCGCGCTGAGGTGCGGAGGTAGCACCGGGGGAGGCA
GTCCATGGGGCCGCGGGTGCCCAGGTAGCACCAGGGGATGCAGTCCATGG
GGGAGCGGGTGCAACCGTTCGAACTTCGGTAGGCGGAGGCGTCCATTCGC
GTTCAGGTGCGGAGGTGGTTCCTGATTTACCCAAGATGTTCACAAGGGGA
AGAGATGGTTGATATCGGGGTGAAAACAAAGGCTGGCTTCACTGCCTCGG
CTAGCAACTAGCAGCAAACACGTTAAAGAGGAGCACGGCACAATATACAT
AAAGAGTAGTTCAAAACAACACCACAAAGATCATTTTGGTTATACGCTTA
CGGAACGATTCAATTGAATAGGAAAGAGCCCGCTTGACCATGCTGTCTAC
AATTTGTCGTGTGGCCCATCCTGAGAACTTCTCGTCGCTGGTGTCGAGGC
ACGCTCGTACGCATACGGCGACGACGGGGGCAGCAGAAAAACAAGGTACA
TACGTACCCGNN

protein sequence of Ec-27_005050.2

>Ec-27_005050.2 ID=Ec-27_005050.2|Name=Ec-27_005050.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=100bp
MRSTGLLVQRWHRGTQSTRVGERGWHRGKRSKGLRAPKWHRGKQSIRAGR
APELGWYREVQSTRAGEQGWHRGKRSMGQRVQPFGLRWVEGSIRVGERR*

mRNA from alignment at chr_27:4574542..4588160-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>Ec-27_005050.2 ID=Ec-27_005050.2|Name=Ec-27_005050.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=13619bp|location=Sequence derived from alignment at chr_27:4574542..4588160- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
CTCACCGGGGGATGCGGTCCACGGGGCTGCCGGTGCCCAGGTAGCTCCGG
GGGATGCCGTCCACTCGCGTTGGGGGGCGGGTGTGGCACCGGGGGATGCG
GTCCAAGGGGCTGCTGGCGCAAAGGTGGCACCGGGGGACGCAGTCCACTC
GCGTTGGGGAGCGGGGGTGGCACCGGGGGATGCGGTCCAAGGGGCTGCTG
GTGCAACGGTGGCACCGGGGGACGCAGTCCACTCGCGTTGGGGAGCGGGG
GTGGCACCGGGGGAAGCAGTCCATTCGCGTAGGGCGGGCACCGGAGCTAG
GGTGGTACCGGGGGAAGCGGTCCATTCGCGTTGGGGGGCGGGGGTAGCAC
CGGGGGATGCGGTCCACGGGGCTGCTGGTGCAAAGGTGGCACCGGGGGAC
GCAGTCCACTCGCGTTGGGGAGCGGGGGTGGCACCGGGGGAAGCGGTCCA
AGGGGCTGCGGGCGCCCAAGTGGCACCGGGGGAAGCAGTCCATTCGCGCA
GGGCGGGCACCGGAGCTTGGGTGGTACCGGGAGGTGCAGTCCACTCGCGC
TGGGGAGCAGGGGTGGCTCCTGATGAACACGCCGGCAATGAAAAAAGGTT
GAGGCATGTATGGTATGTGGTGGGCGGGTGGGCAAAAAATAAACAAGTGA
GAGCCTGTTTGAGTTTGCTTTGAGTTCGAGCAAAGACTTGCAGTTCAGTC
AAGGTCTAACCTTAAAAAAAAGCAAGGCACCCTGCGCTCTCACGTTGAAC
GTTCACTTTTCGCTGGTCGGATAAATTGCCACCGACAAGGTTGCAAAAAG
AACAACTCCTCTTTTTTTTTTCTGAATACGACCCAACGAATCCATCTATA
AAGAGTCTAAAATAGATGAGCAATTAACTCATAGCGCCAGAGAAAGCTAC
CTGTATTACCACGGTCTATTCTTATTTCGCCGGCGCGTATTCATGCCGCG
TTTCGGTTCGAAATGACGCCGCGTGTCGGTTCGCATCACAACTCGTTTCG
GTTCGTATCATACCGCGTTTGGGGCCGTTTCGCGCCTTAGCAGCCGGTTG
CTGTGCGTTGTGCATCGCGGGGGAGGGGGGGAAAGGTCCGTAATACCTCC
CCTCGTCGGCCGGTCGCTCGCTCGCATCGCATCGCATCGCATCGTCGAAA
ACACCGCGTGCTAATCGTACCTGGGGAAGCGGTCCAAGGGGCAGCTGGCG
CCCAGGTAGCACCGGGGGAAGCAGTCCATTCACGTTGGGGAGCGGGCGTG
GCACCAGGGGAAGCCGTCCATTCACGCTGGGGAGCGGGCGTGGCACCCGG
CGACGCGGTCCATTCGCGTTGGGGGGCGGGCGTGGCACCTGAAAATAATA
ACATCCATGAACAAATTGCGAACGTTTTGAGTCATGGGAGGGGTGGGGGG
AGGGTGGGGGGTGGGGACGAACTGTGCGGAAAGGAAGAACCGCGTACCGT
AGCAGCCCGGACAAAAAAGCACGACATTGCGTATGTCGTTTTCAAGTCTT
TTTGACACGCGGCAGACGAGCAGCAGAGAGACGCCTACGCAATTGATTCA
AGGCGATCTTGAAAACACTATTCTAACGATCACGCCTACGATGGCATTAC
TCACAGCCCATCCACTAAGCAAGAAGAGCGGTCCGGAGTAAGCAACGCGG
GAGGGCCGGACATTCGTCGTCAAGCCCATACTTCGTGTGCAGTTGGGCGC
ACCTCCCGACGCTGGGTCAATTTTCACTTAAAATCCAATATACCAAAACA
AAAGCAACCTTCCCACCATTGAGTTCTGACAAATTCTACTGCTGTTATCA
GTAGAGGGCCGGCCCCATGAAGAGGCATCAGCGTGCTGGCACGTGCAGGT
TCGGTACTGAAGCTGAAACATCGAAGGTCGCGGCACTCTCTGAAAGAAGT
CCGTACCCTGTGCGCCAGGACCCAACATGTCTCACAGTCGTGCTCAGTAC
AAGACACGGGGTGTCGGTTCGAATTTGCGGAGATTGTAGGCCGCTACTCC
GACTGAATCTCGATATCACCACTAAAGAAGAAGCTTTGGGCGCGCAAACA
CCCCCACCCCTCCCGGCTGCTATTGTCCTGTAATGACATATTTGAAAAGA
GGGAATCGTCCTCGACAGACGTGGGGGAGATTGCTTTATGAGGTGGTCTC
CACACACCAGTAGAATGAAAAAAAGCTACAAGTTCAAACCCGATAGTTTT
GAGGGTCGGCCGTTTTGGGCCTGACTTGAATATAGACTAGTGCAATTGGC
TCGTGTGAATGAAGACAGACGTGTGGAGGTCGACACATGTTACTTGTGTT
AAGAGCAGCCTCTATTGCCGCCCTGTGCGAGAATCAAAGATTTCTGTTTT
TCCCGATGCCTTCCGACTGATCTCGTATGCGCGAATTTAGACACATAGCC
CCGCCTCCATCCCCGGGGGAGGGGGAAATTCAGAAAAATTACCACGAGAT
AACTCGAACCCACCAGGGGAAGCGGTCCAAGGAGCGACAGGGGCGAACGT
GGCCCCCGGGGGGGCTGTCCATTCGCGTTGGGGAGCAGGGGTGGCACCAG
GGGAAGCGGTCCATTCGCGTTGAGGTGCGGGGGTAGCACCAGGGGATGCG
GTCCAAGGGGCTACGGGCGCGGCAGTGGCCCCGGGGGATGCGGTCCAAGG
GGCTACGGGTGCGGCAGTGGCACCTGGGGATGCGGTCCATTCACGTTGGG
GGGCGGGAGTAGCACCGGGGGATGCGGTCCAAGGAGCTACGGGTGCGGCA
GTGGCACCGGGGGATGCGGTCCATTCGCGTTGGGGGGCGGGGGTGGCACC
GGGGGATGCGGTCCAAGGGGCAACGGGTGCGGCAGTGGCACCGGGGGATG
CGGTCCATTCACGTTGGGGGGCGGGAGTAGCACCGGGGGATGCGGTCCAA
GGAGCTACGGGTGCGGCAGTGGCACCTGGGGATGCGGTCCATTCGCGTTG
GGGAGCAGGGGTGGCACCAGGGGATGCGGTCCAAGGGGCTACGGGTGCGG
CAGTGGCACCTGGGGATGCGGTCCACTCGCGTTGGGGAGCGGGTGTGGCA
CCGGGGGATGCAGTCCATTCGCGTTGAGGTGCAGGGGTGGCACCTGGTAA
ACATCCACCGGTAAATGATGGCAAAAAAAAGGAAAGATAGGTCTTCATTG
ACTGCCTGTGTCGAGGAGATGTGGACCAACCGTCAAGGTTATTCTTCAAC
TTTGCCGAGACCGCTTGGAGGTCGCAGGCTACACAAATGAAAACAACAAG
GAAGGGTGTTCTTTAGTATTACCGCGGACAGTCGTCAATCGAGCCTCAAG
AACGCGCAACTATTAATCGATCACCTGTGATTCGATTTTCCTGAGACATG
GTTGTTGGCGGATGATTTGGAGGTCAACACAACGAGCGCATTGAACCGGG
CGCTTCTGACAGGTGGACACCCACGTGATATTTCGAACACATTTAATTCC
CCTACTTGACGGTCTGAGATGAATTTACAGGCCGTCGATGGCATCAGACA
CGACTTGCTGTAGACTGTGTTGAACAAGACGTGATTGAGGTGACAACTAA
CAACTAAATGGGTTCGATTTAGCCGAAATTATTTTTTTGAGCGCTGCACA
GACGTTTATTTGTGACCAACTATTCTTTGGCTCTCCTTGCCACCAATGGA
CAAAAAATTCGACAAGTAGCATTTCGTAAACAAACGTACGTTTGATTTTT
TCAGTGGGACACGTTTTTCGATTGATCTCTTGCCGCCACTCGCTGAACAA
TCGCATCAAACATGGCTCTGAACCCAGACGCCTGTCACTGCCAAACCGTG
CGGGTTCACAGGCAATGCATAGTAGTTAAAAAGGTGCACCAGAGAGGCCG
GAAGCATCGGCAGCATGCTGTACCGAACGTTTTTTTGTCGCCGTCCAAGA
CCGTTCCATTGCCGTCCAAGACCTCTCTATTCACGTTGTCGTTCCGCAAC
ACAATACAAGACAAGAAGTACACAACCAACCCCGCATAATGGGCGTTGTC
TGTGTCACACGACGACTCACATGCGTCGCTACTGACAAAAGAAAAAGACA
TGAACACACACCCCGAAGTCAAGCGATGGTTGGCACGAATAGGTAGGTGT
GTTTGTTTCGGTACGAACAAAATGGGTTTCCATTAGAGTAATAGGCGGAG
TGTCCCAAGTAGGCGCAACACGACGGGCGGAATCTGTTGGAGGTCGCACG
AGAGGATAGATGTCGCACAAGAGGCAGAGGGAGGGAGGAAGGGACGAAGC
TTGGTTTCGGTTGGCGAAACAACGCGCTGTTTCAGCTTGACGAACGGCTC
GAGGTTTGCTTGCTGGTGTTCCAGAGCGCACGGGGACCAGCCCATACGAC
AGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
CAGCAGCAAGGGTTTCGGCCGGTATACCTTGTCCATCTACAGTGATGTGT
TTGTTCCTTCAAGCGGAGGACAAGTTTTTCGTTTTCTAGAGGAACAAAGC
GACACCCGGAAAGAGAAACTGGAGCTGTCGCCCCGCTTTTATTCGATTCT
GCGGACTCTCTACCGCCCCCTAGAATCAACAATCAGCGCGCCGTCGGGGT
TTCTGCATACCCCACCACGTCGAGGAGATCGGCACAGAAGGAGCGGTGGT
CTCTCCCTTGGCAGCACAACAAAAGAAATACCAAAATCGGCAAAATATCA
CAGTTTAATACATCTCGTCATCGTCGCGCCGCGCGGAGGGGTTTCGGGAG
GGATTCGCTGTCCCCTACTCGGGGCCGTTCGTGGTCGGTCGTGCCTGTGC
GGTCGGGCTGTTCGCGCCGTCGATCGGGCGAAGCGCGTCGCGCGCGAACA
AAGCGTCGTCGGGGGCGGGTACCTTACCTGGAGACTGCGTCCATTCGCGC
AGGGCGGCCACAGGAGTTAGGGTGGTACCGGGCGAGGCGGTCCATTCGCG
TTGGGGGGCGGGCGTGGCACCGGGGGATGCGGTCCAAGGGGCTGCTGGCG
CCCAGGTGGCACCGGGGGAAGCAGTCCATTCGCGTAGGGCGGGCACAGGA
GCTAGGGTGGTACCGGGGGATGCGGTCCATTCGCGTTGGGGAGCGAGGGT
AGCACCGGGGGATGCGGTCCAAGGCGCGGCGGGCGCCCAGGTGGCACCGG
GAGATGCAGTCCACTCGCGTTGGGGAGCGGGAGTGGCACCGGGGGAAGCG
GTCCACGGGGCCGCGGGTGCCCAAGTGGCGCCGGGGGAAGCGGTCCATGG
GGCAGCGGGTGCAACCGTTTGGACTTCGGTGGGTGGAGGGGTCCATTCGC
GTTGGGGAGTGGCGGTAGCACCGGGGGGAGCGGTCCATGGCGCGGCGGGT
GCCCATGTGGCACCGGGGGAAGCTGTCCACGGGGCAGCAGGTGCCCACGT
TTGTTTTTCGGTGGGAGGAGGGGTCCATTCGCGTTGTGGCGCGGGGGTGG
CTCCTGACATGTCCAAGATATTCCAAAAGGGGAAACCATGGGTGGAAGCG
GAGTGAACAACGAGGCTAGCTTAACCACGTCGGCGAACCACTAGCAGCAG
AGCAAAAGGAAGCACGATCTCACTTTTCTTCTCCTGTGTAACGATAAAGA
ATATAGAGAGGGCACGCCGCATGTTTTCTAGACTACTCGAATCATGTATG
TTGGCGTACGCTTGTAGGGTAACGACGCAGCACCTCTTCCAACCAGTAGC
GATAGCAGCAGGAAAATATATAAATATGAAAGCGACCCACACGGGCGGGG
GCCTGCATTCGTCTTCTGTGCTTGTGCTGGCAAAGTCGTATACCGCAGGA
CCGCCGTCGATGTGCGGACGAACGGCCGCGCACACGTGTGGGAGGTGAGT
TTTCGTTTCCTTCTCTATCATGCCGTTTAGTTCCGGTGTTGACTTTTCTT
ACGGTGGGGTTTCGCAAAAATCCTTCCATCGCCGGTCGTTCGTTCGTTCG
TATATCATAGACAGCATGAGCAATACGTGCCTCGGCAAAGCTTGGACAAA
TTGATGTTCCCTTCCGAAATAGCCACTGGTCGCAAGACCCTCCGGAATTA
AATTAAACACCGAAGGGTTAAGGAGCTATGATGACGTAAATCTGTGTAGC
ATTTCCATGATGACAACATCGTGGATACCTGGGGAAGCGGTCCACGGGAC
TGCTGGTGCCCAAGTGGTACCGGGGGAAGCAGTCCATGGGGCCGCGGGTG
CAACCGTTTGTTTTTCGGTGGGAGGAGGGGTCCATTCGCGTTGGGGAGCG
GGGGTAGCACCGGGGGAAGCGGTCCACGGGGCCGCCGGTGCCCCGGTGGC
ACCGGGGGATGCGGTCCACTCGCGTTGGGCAGCGGGTGCAACCGTTTGTA
CCTCTGCTGGGGGAGGGGTCCATTCGCGTTGGGGAGCGGCGGTAGCACCG
GGGGAAGCAGTCCACGGGGCTGCTGGTGCCCATGTTGCACCGGGGGATGC
AGTCCATTCGCGTTGGGGAGCGGGAGTGGCACCGGGGGATGCGGTCCATG
GGGCGGCCGGTGCCCATGTGGCACCGGGGGATGCAGTCCACTCGCGTTGG
GCAGCGGGTGCAACCGTTTGTACCTCTGCTGGGGGTGGGGTCCATTCGCG
TTGGGGCGCGGCGGTAGCACCGGGGGAAGCAGTCCACGGGGCTGCTGGTG
CCCATGTGGCACCGGGAGATGCAGTCCATTCGCGTTGGGGAGCGGGAGTG
GCACCGGGGGAAGCGGTCCACTCGCGTTGGGCAGCGGGTGCAACCGTTTG
TACCTCTGCTGGGGGAGGGGTCCATTCGCGTTGGGGCGCGGCGGTAGCAC
CGGGGGAAGCAGTCCACGGGGCTGCTGGTGCCCATGTGGCACCGGGAGAA
GCGGTCCATGGCGCGGCGGGTGCCCATGTGGCACCGGGGGAGGCGGTCCA
CGGGGCAGCAGGTGCCCACGTTTGTTTTTCGGTAGGAGGAGGGGTCCATT
CGCGTTGTGGCGCGGGGGTGGCTCCTGACATGCCCAAGATATTCCAAAAG
GGGAAACCATGGGTGGAAGCGAAGTGAACAACGAGGCTAGCTGAACCACG
TCGGCGAGCCACTAGCAGCAGAGCAAAAGGAAGCACGATCTCACTTTTCT
TCTCCAGTGTAACGATAAAGAACATAGAGAGGGCACGCCGCATGTTTTCT
AGACTACTCGAATCATGTATGTTGGCGTACGCTTGTAGGGTAACGACGCA
GCACCTCTTCCAATCAGTTGCGATAGCAGCAGGAAAATATATAAATATGA
AAGCGACCCTCATGGGCGGACCTGTATTCGTCTTCTGTGCTTGTGCCGGC
AAAGTCGTATACCGCAGGACCGCCGTCGATGTGCGGACGAACGGCCGCGC
ACACGTGTGGGATGTGAGTTTTCGTTTCCTTCTCTATCATGCCGTTTAGT
TCGACTTTTCTTACGGTGGGGTTTCGCAAAAACTCCTTCCTTCGCCGGTC
GTTCGTTCGTTCGTTCGTTCGTTAGCATATCATAGACAGCATGAGCATTA
CGTGCCTCGGCAAAGCTTGGACAAATTGATGTTCCCTTCCGAAATAGCCA
CTGGTCGCAAGACCCTCCGGAATTAAATTAAACACCGAAGGGAAATTAAA
CACCGAAGGGTTAAGCAGCTATGATGATGTAAATCTGTGTAGCATTTCCA
TGATGACAACATCGTTGATACCTGGGGAAGCGGTCCACGGGGCTGCTGGT
GCCCATGTGGCACCGGGGGAAGCAGTCCATGGGGCCGCGGGTGCAACCGT
TTGTTTTTCGGTGGGAGGAGGGGTCCATTCGCGCTGAGGTGCGGGGGTAG
CACCGGGGGAAGCGGTCCACGGGGCCGCCGGTGCCCAAGTGGCACCGGGG
GATGCGGTCCACTCGCGTTGGGCAGCGGGTGCAACCGTTTGTACCTCTGC
TGGGGGAGGGGTCCATTCGCGTTGGGGAGCGGCGGTAGCACCGGGGGAAG
CAGTCCACGGGGCTGCTGGTGCCCAAGTGGCACCGGGGGATGCGGTCCAC
GGGGCGGCAGGTGCCCATGTGGCACCGGGAGATGCGGTCCACTCGCGTTG
GGCAGCGGGTGCAATCGTTTGTACCTCTGCTGGGGGAGGGGTCCATTCGC
GTTGGGGCGCGGCGGTAGCACCGGGGGAAGCAGTCCATTCGCGTTGGGGA
GCGGGAGTGGCACCGGGGGAAGCGGTCCACGGGGCCGCTGGTGCCCAAGT
GGCACCGGGGGATGCGGTCCACTCGCGCTGGGCAGCGGGTGCAACCGTTT
GCACTTCGGTAGGGGGAGGGGTCCATTCGCGTTGAGGTGCGGGGGTGGCT
CCTGATATACCCAAGGTGTTCACAAGGGGAAGCGATGAGTGATAACGGTG
TGAAAACGAAGGCTGGCTTCACTGCCTGTAAGACTGTAAGAGCCACTTGC
AGCACAATAAAAAGAGGATCACGGTCAAAAAAATAATGGATTTTGATTAC
ATGCACACGGACGATTGTAATCGAATAGGAAAGAGCACGCACGACCATAC
CGTCTATGTGGCGTGGCTCAAGCCGAGAACGTCTCGTCACCTGTGTCGGT
ACGCTCTCGTGCGGCGACGACGGGGGCAGCAGAAAGAACAAGGTACACAC
GTGCTTTTCGCGCGAACGATCGCCTTCTGAGCTTGTACTGCCGAAGTGTA
TACCGCAAGATCGATGTGCACAAGACATCGCACACGTCTAGCGGTAATCG
GACAGCAGTGTCCCCTGGTCTTTCTTGACCGTACTCGCGTCGTCGTTCGG
GTGTGTTCTTATCGCGCGGCCGGTTTCGGAATGCTATTGAGTCGATCGCT
CGTTCGAATCCGAACCGGCACAAACCAACCGAAATCATACCTGGGGAAGC
GGTCCATGGGGCTGCTGGTGCCCAAGTGGCACCGGGGGAAGCAGTCCAAG
GCGGGGCGGGTGCCCAGGTGGCACCGGGGGAAGCGGTCCATGGGGCAGCG
GGTGCAACCGTTTGGACTTCGGTGGGTGGAGGGGTCCATTCGCGTTGGGG
AGCGGCGGTAGCACCGGGGGAAGCGGTCCATGGCGCGGCGGGTGCCCATG
TGGCACCGGGGGAGGCGGTCCACGGGGCAGCAGGTGCCCACGTTTGTTTT
TCGGTGGGGGGAGGGGTCCATTCGCGTTGTGGCGCGGGGGTGGCTCCTGA
CATGTCCAAGATATTCCAAAAGGGGAAACCATGGGTGGAAGCGAAGTGAA
CAACGAGGCTAGCTGAACCACGTCGGCGAGCCACTAGCAGCAGAGCAAAA
GGAAGCACGGTCTCACTTTTCTTCTCCTGTGTAACGATAAAGAATATAGA
GAGGGCACGCCGCATGTTTTCTAGACTACTCGAATCATGTATGTTGGCGT
ACGCTCGTAGGGTAACGACGCAGCACCTCTTCCAACCAGTAGCGATAGCA
GCAGGAAAATATATAAATATGAAAGCGACCCTCATGGGCGGACCTGTATT
CGTCTTCTGTGCTTGTGCCGGCAAAGTCGTATACCGCAGGACCGCCGTCG
ATGTGCGGACGAACGGCCGCGCACACGTGTGGGAGGTGAGTTTTCGTTTC
CTTCTCTATCATGCCGTTTAGTTCCGGTGTTGACTTTTCTTACGGTGGGG
TTTCGCAAAAACTCCTTCCTTCGCCGGTCGTTCGTTCGTTCGTATATCAT
AGACAGCATGAGCATTACGTGCCTCGGCAAAGCTTGGACAAATTGATGTT
CCCTTCCGAAATAGCCACTGGTCGCAAGACCCTCCGGAATTAAATTAAAC
ATCGAAGGGAAATTAAACACCGAAGGGTTAAGCAGCTATGATGATGTAAA
TCTGTGTAGCATTTCCATGATGACAACATCGTTGATACCTGGGGAAGCGG
TCCACGGGGCTGCTGGTGCCCAAGTGGTACCGGGGGAAGCAGTCCATGGG
GCCGCGGGTGCAACCGTTTGTTTTTCGGTGGGAGGAGGGGTCCATTCGCG
CTGAGGTGCGGGGGTAGCACCGGGGGAAGCGGTCCACGGGGCCGCCGGTG
CCCAAGTGGCACCGGGGGATGCGGTCCACTCGCGTTGGGCAGCGGGTGCA
ACCGTTTGTACCTCTGCTGGGGGAGGGGTCCATTCGCGTTGGGGAGCGGC
GGTAGCACCGGGGGAAGCAGTCCACGGGGCTGCTGGTGCCCAAGTGGCAC
CGGGGGAAGCGGTCCACGGGGCCGCCGGTGCCCAAGTGGCACCGGGAGAT
GCGGTCCACTCGCGTTGGGCAGCGGGTGCAACCGTTTGTACCTCTGCTGG
GGGAGGGGTCCATTCGCGTTGGGGCGCGGCGGTAGCACCGGGGGAAGCAG
TCCACGGGGCCGCTGGTGCCCATGTGGCACCGGGGGAAGCGGTCCACGGG
GCCGCCGGTGCCCAAGTGGCACCGGGGGATGCGGTCCACTCGCGTTGGGC
AGCGGGTGCAACCGTTTGTACCTCTGCTGGGGGAGGGGTCCATTCGCGTT
GGGGCGCGGCGGTAGCACCGGGGGAAGCAGTCCATTCGCGTTGGGGAGCG
GGAGTGGCACCGGGGGAAGCGGTCCACGGGGCGGCCGGTGCCCAAGTGGC
ACCGGGGGATGCAGTCCACTCGCGTTGGGCAGCGGGTGCAACCGTTTGTA
CCTCTGCTGGGGGAGGGGTCCATTCGCGTTGGGGTGCGGCGGTAGCACCG
GGGGAAGCAGTCCACGGGGCCGCTGGTGCCCATGTGGCACCGGGGGAAGC
AGTCCACGGGGCCGCGGGTGCAACCGTTTGTTTTTCGGTGGGAGGAGGGG
TCCATTCGCGCTGAGGTGCGGGGGTAGCACCGGGGGAAGCGGTCCACGGG
GCCGCCGGTGCCCAAGTGGCACCGGGGGATGCGGTCCACTCGGCAGCAGG
TGCCCACGTTTGTTTTTCGGTGGGGGGAGGGGTCCATTCGCGTTGTGGCG
CGGGGGTGGCTCCTGACATGTCCAAGATATTCCAAAAGGGGAAACCATGG
GTGGAAGCGAAGTGAACAACGAGGCTAGCTGAACCACGTCGGCGAGCCAC
TAGCAGCAGAGCAAAAGGAAGCACGGTCTCACTTTTCTTCTCCTGTGTAA
CGATAAAGAATATAGAGAGGGCACGCCGCATGTTTTCTAGACTACTCGAA
TCATGTATGTTGGCGTACGCTCGTAGGGTAACGACGCAGCACCTCTTCCA
ACCAGTAGCGATAGCAGCAGGAAAATATATAAATATAAAAGCGACCCTCA
TGGGCGGACCTGTATTCGTCTTCTGTGCTTGTGCCGGCAAAGTCGTATAC
CGCAGGACCGCCGTCGATGTGCGGACGAACGGCCGCGCACACGTGTGGGA
GGTGAGTTTTCGTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNTGCACGTTGGGGCGCGGCGGTAGCACCGGGGGAAG
CAGTCCATGGGGCCGCTGGAGCCCATGTGGCACCGGGGGAAGCGGTCCAC
GGGGCCGCCGGTGCCCAAGTGGCACCGGGGGATGCGGTCCACTCGCGTTG
GGCAGCGGGTGCAACCGTTTGTACCTCTGCTGGGGGAGGGGTCCATTCGC
GTTGGGGCGCGGCGGTAGCACCGGGGGAAGCAGTCCATTCGCGTTGGGGA
GCGGGAGTGGCACCGGGGGAAGCGGTCCACGGGGCGGCCGGTGCCCAAGT
GGCACCGGGGGATGCAGTCCACTCGCGTTGGGCAGCGGGTGCAACCGTTT
GTACCTCTGCTGGGGGAGGGGTCCATTCGCGTTGGGGTGCGGCGGTAGCA
CCGGGGGAAGCAGTCCACGGGGCCGCTGGTGCCCATGTGGCACCGGGGGA
AGCAGTCCACGTGGGCCGCGGGTGCAACCGTTTGTTTTTTCGGTGGGAGG
AGGGGTCCATTCGCGCTGAGGTGCGGGGGTAGCACCGGGGGAAGCGGTCC
ACGGGGCCGCCGGTGCCCAAGTGGCACCGGGGGATGCGGTCCACTCGCGT
TGGGCAGCGGGTGCAACCGTTTGTACCTCTGCTGGGGGAGGGGTCCATTC
GCGTTGGGGAGCGGCGGTAGCACCGGGGGAAGCAGTCCACGGGGCTGCTG
GTGCCCAAGTGGCACCGGGGGAAGCGGTCCACGGGGCGGCTGGTGCCCAT
GTGGCACCGGGAGATGCGGTCCACTCGCGCTGGGCAGCGGGTGCAACCGT
TTGCACTTCGGTAGGGGGAGGGGTCCATTCGCGTTGAGGTGCGGGGGTGG
CTCCTGATATACCCAAGGTGTTCACAAGGGGAAGCGATGAGTGATAACGG
TGTGAAAACGAAGGCTGGCTTCACTGCCTGTAAGACTGTAAGCGCCACTT
GCTGCACAATAAAAAGAGGATCACGGTCAAAAAAATAATGGATTTTGATT
ACATGCACACGGACGATTGTAATCGAATAGGAAAGAGCACGCACGACCAT
ACCGTCTATGTGGCGTGGCTCAAGCCGAGAACGTCTCGTCACCTGTGTCG
GTACGCTCTCGTGCGGCGACGACGGGGGCAGCAGAAAGAACAAGGTACAC
ACGTGCTTTTCGCGCGAACGATCGCCTTCTGAGCTTGTACTGCCGAAGTG
TATACCGCAACATCGATGTCCACAAGACATCGCACACGTCTAGCGGTAAT
CGGACAGCAGTGTCCCCTGGTCTTTCTTGACCGTACTCGCGTCGTCGTTC
GGGTGTGTTCTTATCGCGCGGCCGGTTTCGGAATGCTATTAAGTCGATCG
CTCGTTCGAATCCGAACCGGCACAAACCAACCGAAATCATACCTGGGGAA
GCGGTCCATGGGGCTGCTGGTGCCCAAGTGGCACCGGGGGAAGCAGTCCA
AGGCGGGGCGGGTGCCCAGGTGGCACCGGGGGAAGCGGTCCATGGGGCAG
CGGGTGCAACCGTTTGGACTTCGGTGGGTGGAGGGGTCCATTCGCGTTGG
GGAGCGGCGGTAGCACCGGGGGAAGCAGTCCACGGGGCAGCGGGTGCCCA
TGTGGCACCGGGGGAAGCGGTCCACGGGGCCGCGGGTGCCCATGTGGCAC
CGGGGGATGCAGTCCACTCACGTTGGGCAGCGGGTGCGACTGTTTGCACT
TCGGTGAGGGGAGGGGTCCAATCGCGCTGAGGTGCGGAGGTAGCACCGGG
GGAGGCAGTCCATGGGGCCGCGGGTGCCCAGGTAGCACCAGGGGATGCAG
TCCATGGGGGAGCGGGTGCAACCGTTCGAACTTCGGTAGGCGGAGGCGTC
CATTCGCGTTCAGGTGCGGAGGTGGTTCCTGATTTACCCAAGATGTTCAC
AAGGGGAAGAGATGGTTGATATCGGGGTGAAAACAAAGGCTGGCTTCACT
GCCTCGGCTAGCAACTAGCAGCAAACACGTTAAAGAGGAGCACGGCACAA
TATACATAAAGAGTAGTTCAAAACAACACCACAAAGATCATTTTGGTTAT
ACGCTTACGGAACGATTCAATTGAATAGGAAAGAGCCCGCTTGACCATGC
TGTCTACAATTTGTCGTGTGGCCCATCCTGAGAACTTCTCGTCGCTGGTG
TCGAGGCACGCTCGTACGCATACGGCGACGACGGGGGCAGCAGAAAAACA
AGGTACATACGTACCCGNN

Coding sequence (CDS) from alignment at chr_27:4574542..4588160-

>Ec-27_005050.2 ID=Ec-27_005050.2|Name=Ec-27_005050.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=300bp|location=Sequence derived from alignment at chr_27:4574542..4588160- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGCGGTCCACGGGGCTGCTGGTGCAAAGGTGGCACCGGGGGACGCAGTC
CACTCGCGTTGGGGAGCGGGGGTGGCACCGGGGGAAGCGGTCCAAGGGGC
TGCGGGCGCCCAAGTGGCACCGGGGGAAGCAGTCCATTCGCGCAGGGCGG
GCACCGGAGCTTGGGTGGTACCGGGAGGTGCAGTCCACTCGCGCTGGGGA
GCAGGGGTGGCACCGGGGGAAGCGGTCCATGGGGCAGCGGGTGCAACCGT
TTGGACTTCGGTGGGTGGAGGGGTCCATTCGCGTTGGGGAGCGGCGGTAG

Synonyms

The feature 'Ec-27_005050.2' has the following synonyms


Synonym
Esi000_0756
Esi_000_0756