Ec-00_007980.3 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_007980.3
Unique NameEc-00_007980.3
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length287
Homology
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BLAST of Ec-00_007980.3 vs. uniprot
Match: A0A6H5JHG7_9PHAE (ANAPC8 domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JHG7_9PHAE)

HSP 1 Score: 474 bits (1221), Expect = 3.610e-156
Identity = 264/288 (91.67%), Postives = 271/288 (94.10%), Query Frame = 3 
Query:  645 MDIDTPRPGERDGASASASFATTSGPKMPPTAEIRRALLGAVEELSNHGLKLATKWATEQLVGLPDDEAPDDLRYAAEPNPATPQKQEGGANLRLQGRVAFAKSLMDVGEFERASQAFGNKSWPAAAAAGSVPGGLYSRARFLGWYSLFLAGERRREE-SQLTDALQRRRLVNPHLKTLHAELSQCDQAGTLDAFGLYIYAAVLKALREEGRGGXXXXXXXTPTPRTPHSSXXXXXANSLGGSXXGAFVTPRARAPSGGRGDATGXXXXTTSTEKTAVTTATAQEVLA 1505
            MDIDTPRPGE +GASASASFATTSGPKMPPTAEIRRALLGAVEELSNHGLKLATKWATEQLVGLPDDE PDDLRYAAEP+PATPQK+EGGANL LQGRVAFAKSLMDVGEFERASQAFGNKSWPAAAAAGSVPGGLYSRA+FLGWYSLFLAGERRREE SQLTDALQRRRLVNPHLKTLHAELSQCD+ GTLDAFGLYIYAAVLKALREEGRGGXXXXXXX PTP+TPHSS     ANSLGGS  GAFVTPRARAPSG RGD+TGXXXX   TEKTAVTTATAQEVLA
Sbjct:    1 MDIDTPRPGEGNGASASASFATTSGPKMPPTAEIRRALLGAVEELSNHGLKLATKWATEQLVGLPDDETPDDLRYAAEPDPATPQKREGGANLWLQGRVAFAKSLMDVGEFERASQAFGNKSWPAAAAAGSVPGGLYSRAQFLGWYSLFLAGERRREEESQLTDALQRRRLVNPHLKTLHAELSQCDEDGTLDAFGLYIYAAVLKALREEGRGGXXXXXXXXPTPKTPHSSGGGVGANSLGGSGGGAFVTPRARAPSGDRGDSTGXXXXXXXTEKTAVTTATAQEVLA 288
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BLAST of Ec-00_007980.3 vs. uniprot
Match: D7G4Y9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Y9_ECTSI)

HSP 1 Score: 178 bits (452), Expect = 1.230e-50
Identity = 92/94 (97.87%), Postives = 93/94 (98.94%), Query Frame = 3 
Query:  960 MDVGEFERASQAFGNKSWPAAAAAGSVPGGLYSRARFLGWYSLFLAGERRREE-SQLTDALQRRRLVNPHLKTLHAELSQCDQAGTLDAFGLYI 1238
            MDVGEFERASQAFGNKSWPAAAAAGSVPGGLYSRARFLGWYSLFLAGERRREE SQLTDALQRRRLVNPHLKTLHAELSQCDQAGTLDAFGLY+
Sbjct:    1 MDVGEFERASQAFGNKSWPAAAAAGSVPGGLYSRARFLGWYSLFLAGERRREEESQLTDALQRRRLVNPHLKTLHAELSQCDQAGTLDAFGLYM 94
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BLAST of Ec-00_007980.3 vs. uniprot
Match: A0A835YMH9_9STRA (ANAPC8 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMH9_9STRA)

HSP 1 Score: 105 bits (262), Expect = 1.980e-20
Identity = 65/169 (38.46%), Postives = 101/169 (59.76%), Query Frame = 3 
Query:  765 AVEELSNHGLKLATKWATEQLVGLPDDEAPDDLRYAAEPNPATPQKQEGGANLRLQGRVAFAKSLMDVGEFERASQAFGNKSWPAAAAAGSVPGGLYSRARFLGWYSLFLAGERRR--EESQLTDALQRRRLVNPHLKTLHAELSQCDQAGTLDAFGLYIYAAVLKALR 1265
            AV +LS  GLKLA+KWA EQL+GLP    P      +   P     +  G +     ++ FA++L+D GE++RA+  FG+     A A   +P    + A+F+  Y+L+LAGE+R+  E+++L+  L+R  + NP+L TLH ELS   + G LD FGLY++  VL+ ++
Sbjct:   30 AVRDLSARGLKLASKWAAEQLLGLP----PGPASAHSSLYPRVEFTEGDGMDSMWHDQLLFARTLLDTGEYQRAAAVFGSD----AQAVAELP----AHAQFVRHYALYLAGEKRKAEEKAKLSGPLERCSVTNPNLLTLHEELSTLHERGQLDGFGLYMFGVVLREMK 186
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BLAST of Ec-00_007980.3 vs. uniprot
Match: A0A7S1ZWA1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZWA1_9STRA)

HSP 1 Score: 102 bits (254), Expect = 1.820e-19
Identity = 72/181 (39.78%), Postives = 102/181 (56.35%), Query Frame = 3 
Query:  738 AEIRRALLGAVEELSNHGLKLATKWATEQLVGLPDDEAPDDLRYAAEPNPATPQKQEGGANLRLQGRVAFAKSLMDVGEFERASQAFGNKSWPAAAAAGSVPGGLY---SRARFLGWYSLFLAGERRREES--QLTDALQRRRLVNPHLKTLHAELSQCDQAGTLDAFGLYIYAAVLKALR 1265
            AE R  L  A +  S +GLKL+TKW  EQL+GLP    P         +  TP ++E   +  L     +AKSL+D+GE+ERA+    + +  +A A  ++P  L    S   F+  Y+L++AGERR+ E   +L + L+R +L NP+L  L  EL     +G LDAFGLYIY  VLK L+
Sbjct:   84 AEARMELRKASKITSTYGLKLSTKWICEQLIGLPPSPPPSSFNGTN--HFFTPFEEENENDATL-----YAKSLLDLGEYERAALVLSSGNNASAVAGSTIPPPLEELSSLGFFIRCYALYMAGERRKGEDVEELREPLERTKLRNPNLTQLSHELYDYYTSGALDAFGLYIYGVVLKELQ 257
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BLAST of Ec-00_007980.3 vs. uniprot
Match: A0A7S1ZX13_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZX13_9STRA)

HSP 1 Score: 102 bits (254), Expect = 2.670e-19
Identity = 72/181 (39.78%), Postives = 102/181 (56.35%), Query Frame = 3 
Query:  738 AEIRRALLGAVEELSNHGLKLATKWATEQLVGLPDDEAPDDLRYAAEPNPATPQKQEGGANLRLQGRVAFAKSLMDVGEFERASQAFGNKSWPAAAAAGSVPGGLY---SRARFLGWYSLFLAGERRREES--QLTDALQRRRLVNPHLKTLHAELSQCDQAGTLDAFGLYIYAAVLKALR 1265
            AE R  L  A +  S +GLKL+TKW  EQL+GLP    P         +  TP ++E   +  L     +AKSL+D+GE+ERA+    + +  +A A  ++P  L    S   F+  Y+L++AGERR+ E   +L + L+R +L NP+L  L  EL     +G LDAFGLYIY  VLK L+
Sbjct:   84 AEARMELRKASKITSTYGLKLSTKWICEQLIGLPPSPPPSSFNGTN--HFFTPFEEENENDATL-----YAKSLLDLGEYERAALVLSSGNNASAVAGSTIPPPLEELSSLGFFIRCYALYMAGERRKGEDVEELREPLERTKLRNPNLTQLSHELYDYYTSGALDAFGLYIYGVVLKELQ 257
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BLAST of Ec-00_007980.3 vs. uniprot
Match: A0A5D6Y6S1_9STRA (ANAPC8 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y6S1_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 3.350e-15
Identity = 80/214 (37.38%), Postives = 98/214 (45.79%), Query Frame = 3 
Query:  741 EIRRALLGAVEELSNHGLKLATKWATEQLVGLPDDEAPDDLRYAAEPNPATPQKQEGGANLRLQG--------RVAFAKSLMDVGEFERASQAFGNKSWPAAAAAGSVPGGLYSRARFLGWYSLFLAGERRREESQL--------TDALQRRRLVNPHLKTLHAELSQCDQAGTLDAFGLYIYAAVLKAL---REEGRGGXXXXXXXTPTPRTP 1325
            EI   L  AV EL   GLK A K+A+E ++G+PD+     LR           +  GGA  R  G        R   A +  D GEF RA Q          A+A   PG   SRA FL  Y+LF+AGE+ +EE  L        ++   +R   NPHLK L+  LS   Q   LDAFGLY+YA VLK L      GR         TPT   P
Sbjct:    9 EILAQLRAAVRELRLRGLKQAAKFASELVLGVPDE-----LRAQL--------RGGGGAFGRFDGADEDDDSDRYDAASASFDAGEFLRAHQLL--------ASARCAPG---SRAHFLRHYALFMAGEKAKEEMDLEIGVTGAKSERSPQRNGSNPHLKALYLSLSGAYQQSELDAFGLYLYAVVLKRLGYRTSAGRADVPLSAASTPTHHPP 198
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BLAST of Ec-00_007980.3 vs. uniprot
Match: R1ER78_EMIHU (Putative cell division cycle protein 23, CDC23 n=3 Tax=Emiliania huxleyi TaxID=2903 RepID=R1ER78_EMIHU)

HSP 1 Score: 84.7 bits (208), Expect = 9.430e-14
Identity = 65/188 (34.57%), Postives = 94/188 (50.00%), Query Frame = 3 
Query:  747 RRALLGAVEELSNHGLKLATKWATEQLVGLP----DDEAPDDLRYAAEPNPATPQKQEGGANLRLQGRVAFAKSLMDVGEFERASQAFGNKSWPAAAAAGSVPGGLYSRARFLGWYSLFLAGERRREESQLTDA----------LQRRRLVNPHLKTLHAELSQCDQAGTLDAFGLYIYAAVLKALRE 1268
            R  L  AV +LS+ GLK + KWA EQLVGL     DDEA           P +P ++ G  +   + ++  AK+  D+ EF+RA+ A              V  G  +  RFL WYSLFLAG++R+ E +  +           L + R  N HL  L+AEL+   ++  LD FG Y++  VL+ L +
Sbjct:    5 RAQLRAAVRDLSDRGLKCSAKWAAEQLVGLAGGPLDDEA------GTSDAPMSPAEEVG--SREEEDQLLLAKAYFDLNEFKRAAHAL------------RVARG--ASGRFLRWYSLFLAGQKRQAEEEAEERSGGAGAPGSLLGKPRASNQHLPLLNAELTAARESEGLDGFGHYLHGIVLRELAQ 170
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BLAST of Ec-00_007980.3 vs. uniprot
Match: A0A7S3WLC8_EMIHU (Hypothetical protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3WLC8_EMIHU)

HSP 1 Score: 84.7 bits (208), Expect = 1.130e-13
Identity = 65/188 (34.57%), Postives = 94/188 (50.00%), Query Frame = 3 
Query:  747 RRALLGAVEELSNHGLKLATKWATEQLVGLP----DDEAPDDLRYAAEPNPATPQKQEGGANLRLQGRVAFAKSLMDVGEFERASQAFGNKSWPAAAAAGSVPGGLYSRARFLGWYSLFLAGERRREESQLTDA----------LQRRRLVNPHLKTLHAELSQCDQAGTLDAFGLYIYAAVLKALRE 1268
            R  L  AV +LS+ GLK + KWA EQLVGL     DDEA           P +P ++ G  +   + ++  AK+  D+ EF+RA+ A              V  G  +  RFL WYSLFLAG++R+ E +  +           L + R  N HL  L+AEL+   ++  LD FG Y++  VL+ L +
Sbjct:    5 RAQLRAAVRDLSDRGLKCSAKWAAEQLVGLAGGPLDDEA------GTSDAPMSPAEEVG--SREEEDQLLLAKAYFDLNEFKRAAHAL------------RVARG--ASGRFLRWYSLFLAGQKRQAEEEAEERSGGAGAPGSLLGKPRASNQHLPLLNAELTAARESEGLDGFGHYLHGIVLRELAQ 170
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BLAST of Ec-00_007980.3 vs. uniprot
Match: K3WCG3_GLOUD (ANAPC8 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WCG3_GLOUD)

HSP 1 Score: 82.0 bits (201), Expect = 7.560e-13
Identity = 75/215 (34.88%), Postives = 94/215 (43.72%), Query Frame = 3 
Query:  738 AEIRRALLGAVEELSNHGLKLATKWATEQLVGLPDD----------EAPDDLRYAAEPNPATPQKQEGGANLRLQGRVAFAKSLMDVGEFERASQAFGNKSWPAAAAAGSVPGGLYSRARFLGWYSLFLAGERRREESQL--------TDALQRRRLVNPHLKTLHAELSQCDQAGTLDAFGLYIYAAVLKALREEGRGGXXXXXXXTPTPRTPH 1328
            AEI   L  AV EL   GL  ATK+A+E ++G+PD            A D  RY +  + A P        L    R   AK+  DVGE+ RA     N            P G   +  FL  Y+L++AGE+ +EE  L        ++    R   NPHLK L+  LS   Q   LDAFGLY+YA VLK L      G         TP  PH
Sbjct:   10 AEILAQLRDAVSELRMRGLNQATKFASELVLGIPDALRKQLSSTGVRAFD--RYESASSDAFP--------LEDLDRYEAAKASFDVGEYLRAHHMLAN-----------APMGR--QTHFLKHYALYMAGEKAKEEMDLEISVTGAKSEPNPERNGTNPHLKELYISLSGSYQQNELDAFGLYLYAVVLKRLGYRTSAGRSDLQSSASTPTRPH 201
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BLAST of Ec-00_007980.3 vs. uniprot
Match: G5AH76_PHYSP (ANAPC8 domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=G5AH76_PHYSP)

HSP 1 Score: 79.7 bits (195), Expect = 4.440e-12
Identity = 72/210 (34.29%), Postives = 93/210 (44.29%), Query Frame = 3 
Query:  756 LLGAVEELSNHGLKLATKWATEQLVGLPD-------------DEAPDDLRYAAEPNPATPQKQEGGANLRLQGRVAFAKSLMDVGEFERASQ--AFGNKSWPAAAAAGSVPGGLYSRARFLGWYSLFLAGERRREESQL----------TDALQRRRLVNPHLKTLHAELSQCDQAGTLDAFGLYIYAAVLKALREEGRGGXXXXXXXTP 1310
            L  AV +L   GLK AT++A E L+G+ D             DEA D+L   AE +                 R   AK+  DVGE+ RA    A G+ S+        V      + RFL +Y+L+LAGE+ +EE  L           D    R+  NPHLK L+  LS   Q  +LD FGLY+YA VLK L      G       TP
Sbjct:   10 LRSAVRDLRVRGLKQATQFAAELLLGMGDAAHRRSSLEPRRCDEAEDELEDWAEAD-----------------RFEAAKACFDVGEYLRAHHMLAQGDGSFSLGPEGEDVCRIPTQKTRFLKYYALYLAGEKAKEEMDLEMNVTGSTKEVDRNLHRQGTNPHLKELYLSLSAAYQHNSLDGFGLYLYAVVLKRLGYSTSTGSTQVQSSTP 202
The following BLAST results are available for this feature:
BLAST of Ec-00_007980.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JHG7_9PHAE3.610e-15691.67ANAPC8 domain-containing protein n=3 Tax=Ectocarpu... [more]
D7G4Y9_ECTSI1.230e-5097.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YMH9_9STRA1.980e-2038.46ANAPC8 domain-containing protein n=1 Tax=Tribonema... [more]
A0A7S1ZWA1_9STRA1.820e-1939.78Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S1ZX13_9STRA2.670e-1939.78Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A5D6Y6S1_9STRA3.350e-1537.38ANAPC8 domain-containing protein n=1 Tax=Pythium b... [more]
R1ER78_EMIHU9.430e-1434.57Putative cell division cycle protein 23, CDC23 n=3... [more]
A0A7S3WLC8_EMIHU1.130e-1334.57Hypothetical protein n=2 Tax=Emiliania huxleyi Tax... [more]
K3WCG3_GLOUD7.560e-1334.88ANAPC8 domain-containing protein n=1 Tax=Globispor... [more]
G5AH76_PHYSP4.440e-1234.29ANAPC8 domain-containing protein n=5 Tax=Phytophth... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:12952107..12959515 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score266.2
Seed ortholog evalue1.8e-68
Seed eggNOG ortholog2880.D7FLS8
Preferred nameAPC8
Length1507
KEGG koko:K03355
KEGG Pathwayko04110,ko04111,ko04113,ko04114,ko04120,ko04914,ko05166,map04110,map04111,map04113,map04114,map04120,map04914,map05166
KEGG ModuleM00389
Hectar predicted targeting categoryother localisation
Gene idEc-00_007980.3
GOsGO:0008150,GO:0031347,GO:0048583,GO:0050789,GO:0065007,GO:0080134
EggNOG free text desc.regulation of mitotic metaphase/anaphase transition
EggNOG OGsCOG0013@1,KOG1155@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03036,ko04121
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_007980Ec-00_007980Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 12952107..12959515 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_007980.3Ec-00_007980.3Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 12952107..12957733 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_007980.3.8Ec-00_007980.3.8Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 12952107..12952177 -
Ec-00_007980.3.7Ec-00_007980.3.7Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 12952603..12952799 -
Ec-00_007980.3.6Ec-00_007980.3.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 12953478..12953599 -
Ec-00_007980.3.5Ec-00_007980.3.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 12955361..12955506 -
Ec-00_007980.3.4Ec-00_007980.3.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 12956426..12956583 -
Ec-00_007980.3.3Ec-00_007980.3.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 12957105..12957190 -
Ec-00_007980.3.2Ec-00_007980.3.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 12957653..12957852 -
Ec-00_007980.3.1Ec-00_007980.3.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 12958989..12959515 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_007980.3CDS:Ec-00_007980.3Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 12952107..12952177 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0079805UTR:Ec-00_007980.3Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_00 12957734..12957852 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_007980.3 ID=Ec-00_007980.3|Name=Ec-00_007980.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=287bp
MDIDTPRPGERDGASASASFATTSGPKMPPTAEIRRALLGAVEELSNHGL
KLATKWATEQLVGLPDDEAPDDLRYAAEPNPATPQKQEGGANLRLQGRVA
FAKSLMDVGEFERASQAFGNKSWPAAAAAGSVPGGLYSRARFLGWYSLFL
AGERRREESQLTDALQRRRLVNPHLKTLHAELSQCDQAGTLDAFGLYIYA
AVLKALREEGRGGAGGTGGNTPTPRTPHSSGGGGGANSLGGSGGGAFVTP
RARAPSGGRGDATGGGGGTTSTEKTAVTTATAQEVLA
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spliced messenger RNA

>Ec-00_007980.3 ID=Ec-00_007980.3|Name=Ec-00_007980.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1507bp|location=Sequence derived from alignment at chr_00:12952107..12959515- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
CGCTTTGTACCCCCTGCAGCTTCTTCAGCTCAGCATCCACCTCCGGGCTC
CTTCCAGGCTGGGCCATCTCTCAGCGCTCCTAGTTTCTTCACTCCTCGCT
GCTGTGCTACTGGCTTGCCCGCAGCTGCAGCTGCTCCTGTCAACCCTGGT
GTGCCTGTTGGGTGATCCTGAAGGTTGCCTTACCCTGCCCCTTCCCCGGT
CTCGAGACTATGCCAACGAACGCCAACTTCGAAACAGCCGTTCGGTGGAG
GTATGGTTTGTGTGCTGGGTCGCGTGTGCACCCTGCGGTGGGTATGGCGT
TGGTGCACAGTTGGTGTGCCGATCGGATGATCGGATCAGTCCTTGCTGCT
TGAAAACGCGGCGGGATTGCTTGTGCTGGGGCGACGCCCTCACACGATAC
CCCTAATTTTGTGCAGGTTGAGGATGCCCCCATCAGACGCAGCTGCGTGC
GGTGCCAGCGCTTCGCTTTGCCTCACCGCAGGAAGGAACAGAGGTGCTAA
CTAGCAAGGAGCGGGAGGTTTGGGGAGTCGGTGTTCACCAACCCCTCTTT
TTGCTTTGGAAGACACGCTCGAGGTTTGTGGGAGACTTTGCTCCAGCCCG
TGCTCACTCTGGGGTGTCTCTTTTTGGTCCGTTGACAGCGGTTGTCATGG
ACATCGACACGCCGCGCCCTGGGGAAAGGGACGGGGCCTCTGCATCGGCA
TCGTTCGCAACGACATCCGGGCCGAAGATGCCTCCAACCGCGGAGATACG
CAGGGCTCTGCTGGGCGCAGTGGAGGAGCTGTCCAACCACGGCCTCAAGC
TCGCCACGAAATGGGCTACTGAGCAGCTGGTCGGTCTGCCTGACGATGAG
GCGCCCGACGACTTGCGGTACGCGGCGGAACCAAACCCAGCCACCCCTCA
GAAGCAGGAAGGGGGGGCGAATCTGCGGCTTCAGGGCCGCGTAGCGTTTG
CGAAGTCCCTGATGGATGTCGGGGAATTCGAGAGGGCGTCGCAGGCTTTC
GGAAACAAGAGCTGGCCTGCTGCAGCGGCGGCAGGCTCCGTTCCGGGCGG
CCTCTACTCCCGAGCCCGGTTCCTTGGGTGGTACTCCCTCTTCCTTGCGG
GTGAAAGGCGGCGCGAGGAGTCGCAACTGACCGACGCTCTTCAGCGGCGA
AGACTGGTCAACCCGCACCTCAAGACGCTCCACGCAGAACTGTCGCAGTG
CGATCAGGCCGGGACTCTCGATGCCTTCGGCCTATACATATACGCCGCCG
TCCTCAAGGCCCTGCGAGAGGAAGGGCGTGGGGGTGCAGGGGGCACGGGA
GGAAATACCCCAACCCCTAGAACGCCTCACTCAAGCGGTGGTGGCGGCGG
TGCAAATTCTCTTGGTGGGAGTGGCGGTGGAGCTTTCGTGACGCCGAGAG
CACGAGCTCCATCGGGCGGCAGGGGTGACGCGACCGGAGGAGGGGGAGGA
ACGACGTCAACCGAGAAGACCGCGGTGACGACTGCGACAGCCCAGGAGGT
TTTGGCT
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protein sequence of Ec-00_007980.3

>Ec-00_007980.3 ID=Ec-00_007980.3|Name=Ec-00_007980.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=287bp
MDIDTPRPGERDGASASASFATTSGPKMPPTAEIRRALLGAVEELSNHGL
KLATKWATEQLVGLPDDEAPDDLRYAAEPNPATPQKQEGGANLRLQGRVA
FAKSLMDVGEFERASQAFGNKSWPAAAAAGSVPGGLYSRARFLGWYSLFL
AGERRREESQLTDALQRRRLVNPHLKTLHAELSQCDQAGTLDAFGLYIYA
AVLKALREEGRGGAGGTGGNTPTPRTPHSSGGGGGANSLGGSGGGAFVTP
RARAPSGGRGDATGGGGGTTSTEKTAVTTATAQEVLA
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mRNA from alignment at chr_00:12952107..12959515-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_007980.3 ID=Ec-00_007980.3|Name=Ec-00_007980.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=7409bp|location=Sequence derived from alignment at chr_00:12952107..12959515- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
CGCTTTGTACCCCCTGCAGCTTCTTCAGCTCAGCATCCACCTCCGGGCTC
CTTCCAGGCTGGGCCATCTCTCAGCGCTCCTAGTTTCTTCACTCCTCGCT
GCTGTGCTACTGGCTTGCCCGCAGCTGCAGCTGCTCCTGTCAACCCTGGT
GTGCCTGTTGGGTGATCCTGAAGGTTGCCTTACCCTGCCCCTTCCCCGGT
CTCGAGACTATGCCAACGAACGCCAACTTCGAAACAGCCGTTCGGTGGAG
GTATGGTTTGTGTGCTGGGTCGCGTGTGCACCCTGCGGTGGGTATGGCGT
TGGTGCACAGTTGGTGTGCCGATCGGATGATCGGATCAGTCCTTGCTGCT
TGAAAACGCGGCGGGATTGCTTGTGCTGGGGCGACGCCCTCACACGATAC
CCCTAATTTTGTGCAGGTTGAGGATGCCCCCATCAGACGCAGCTGCGTGC
GGTGCCAGCGCTTCGCTTTGCCTCACCGCAGGAAGGAACAGAGGTGCTAA
CTAGCAAGGAGCGGGAGGTTTGGGGAGGTGAGAGGATGAATAAATCACCG
CTGTATAGGAGTATCAAGAATTGATGTCTGTGGAGACTAGCAACGAACAC
ATCTTGTGTACGAGATCATCGTTAGCGTAATTTTTGAATTGGGATGCAAG
GCTGACTGCCCTGATAAGGGCGCGTTCGGTTGCGAGTGTCGAGAGGCCCG
CTGCCAACAGTACTGCTGTAGTGCGTTGGCGACACACCTTGTTTTGGCGG
CTACTGCAGTAGAACCTTGACTTCGCGAAACTATGCAACAGCTTGTTCCC
GTCGGCAGTTTGCAGGAGCAGGAGCTACTGCTGTGCTGAGTGCGCTGACT
ACATGTAGATACAGCAAGTAAGCAATCCTTGCAGAGCTGCTGCTGCTAAA
AATAATATTCTCCTATAACTTGAGACATGAGCCTTCCCCGTAGTGAAGTA
CGCACACGCGGTGGTGTTTTTTCTGGAGCTATGCGCATACCATTTCTTAA
CACCACCACCGCGGTACGGCTCGGCTAACAGAAGAAGAAGAAGTGCTGCA
GGTTTCGGGAGGCCAAAATGCCACGAGAGCGTCTCGCGTTGCATGCCTTG
AGCTTTAGCTTTTGACAAATCGGTATCGGGGGTGTGGTATCTACTGCAAC
ATACAATACTAAAGGTCGGAGGTCGTCTCTCCTGTTTTCGTATTACAGCA
TACAAAGCCTTCGCTGTGTAATCTATGTAGGACCGACTCGCCGCCGCCGC
CGTTCCGTCGACGCGAAGGACGCGGATATGAGAGAAGATTGCTCGTCTAC
ACTTTGTTCGCGATATCTATACTCCTGTACCTTTACAGCGATGACCCTCG
AGTGTGTTCTCTGAAGGGTCTTTCGGCGCGTGTGTCCACGACCGAAACGG
GCACAACCCAACAGCATGTGGAGTTTCACCTCGGTATGTAGCTATCGCTC
CCATCAGGGCGGGTGGCGTTACCGGCTATTTTTTTGCAGCTACGCAACCA
ATACTTCAGCTTCCCTACAACTCCCAGATACCTTCTTCTGCCGTTGCTTG
GCCAATCGAAAGCTGTGTGCCCCTGAGCTCATGCAGGACATCGTGGGACA
GGGCGTCGACAACACCGATCGCATGTGCCTCGTCTCTGTTGTGGTGTCGT
ATCCTTGCCGCAGTCGGTGTTCACCAACCCCTCTTTTTGCTTTGGAAGAC
ACGCTCGAGGTTTGTGGGAGACTTTGCTCCAGCCCGTGCTCACTCTGGGG
TGTCTCTTTTTGGTCCGTTGACAGCGGTTGTCATGGACATCGACACGCCG
CGCCCTGGGGAAAGGGACGGGGCCTCTGCATCGGCATCGTTCGCAACGAC
ATCCGGGCCGAAGGTACTTCTGTTCTGTTGCTGATTTATCATTTGCTGTT
GCTGTCACCTTTGTTTGTGGCGCTATTATGTTGAGAGCGTTGGCTTTGTT
TCTTGTATACCTTCTCCACAAGCGGGAAACAACCCTTTTTCTTGTTATCC
ACTATTTTCGTTCGGACGCCCTTCGCTTTTTGCCAATCTTGACGCACGTC
GAACATGCTATCCCGAGGAGCGATGTGTTTGCTGTACACTACTGTAGTAG
CCGTCGTTGCAGGCGGAAACCCCACGAGATTTTGCTTGTGAGTACGGCCT
GAATGGCCAATCAATGCCAGTCCGGGTGTATTTGTGTGCTGACTGCTAAT
TCCTCGGTTTGTGATTGGGTCGGAGCTTATTGCCCGCCTCACCGCTTCCC
CTACCCATCTCACATGGCGGGGGAGCAACCGGTATCAGTCGACGATTCCA
TTCCCACCTTTCGTTGACTCTACAGATGCCTCCAACCGCGGAGATACGCA
GGGCTCTGCTGGGCGCAGTGGAGGAGCTGTCCAACCACGGCCTCAAGCTC
GCCACGAAATGGTGAGTTTTTGGCTGTGTTGTGTTGCAGTTTTGCAGTTT
TCAACTGCAATTGTACCGGTATGCGGAGTCATTCTTGATGGCGGCGGGGA
TGTTGTGATGTTGTGATGTTGTTGCGGCTGCTTCCGCGGTGTTGCTGTCT
TTTTTTATTTTGTTTACGCACGAATGCCCTGTTCCTTACGGACGGTGCGG
GTGTGCTAGTGGTGATTCACGTCTCGGTTGTTTGGGTGGCCATGCGTCAT
GTTGGACGTGTGCGTAACCAAAGCGGCGACGTTGTGTTTGAACATCTCGG
GTGTTTTTCCGCCCGCACAACATTGTCCTGGCTTGAAGTTAAATTCAGGG
CTATCTATCGTATGGGATAGTGGTACTGCTTGAGACCTGTCCCCCCTTTG
TTCTTCTGGTGTTCTCCATCCGCATTTATTTCTCCCACAACTTGATGTGC
CCTGTACTATACTCCAAGTTTTTCAACTTTTTTTATTTCTTTGTCTTGTA
TATACAACACCATGGTCTTGTTGCAAAATCAGGGCTACTGAGCAGCTGGT
CGGTCTGCCTGACGATGAGGCGCCCGACGACTTGCGGTACGCGGCGGAAC
CAAACCCAGCCACCCCTCAGAAGCAGGAAGGGGGGGCGAATCTGCGGCTT
CAGGGCCGCGTAGCGTTTGCGAAGTCCCTGATGGATGTCGGTGAGAAGGC
CAAGTGTGAAGGTTGATTGATTGATCGCTCTTGTGGTTGCCAACCAGTGT
TTTTTTTAAATGTAATCGAGTTTGCACCATCCTGTGCTATTTAGATCGCA
GCTATGCCCATGTTGCCCCAGTTCTTTCCCCCCTTTTCTTCGCCTTTTCC
TTGTTGGCACTGCTGTTTTCTTGCTTTTGGCCTTTTTTTGTGATGACATG
TACTTGTTGTGGCCGTTGTCCAAGAGGTCGAGGTCGTGCTCAACTCATTC
TGCGGCAATATCCGGCACACACCAGGTGCACTTTTGCATACGGTAGGTTA
TTATCTCTTACACCAGGCTGGTATGTTTTGTTCTCATGGCCCCGCTCTGT
GGCATGTGTGGCGGCAGGGTTGGCTGTCCCTCTCAGCACCGTGGTAGCTA
TCTAAAAACATGGGGGGTTACTGTTCGCTTCCTGATTCCGATTGTCGAAA
CAGCCATCCAACGCACAGACGAACTACTTTTAACTCGCCTCTCAAGGAAA
GGAAAGAAAACAACGCACACACACGCACAAGTGTATGCACTCAGCTGGTC
GGTGGCGGGGACGACCGCCTCACCTCTCAAAATTTCTCGATACCGAGAAC
GCGACAGCTGTTGCACAGCAGTACACACTTTTACACAAGCACATGAATCA
GCAAGATTGTAGCGTTTTCGCCTCAAGACAAGACTGTTCCAATGCCCCGC
CGACGCGTTTGCAAGCACAACCGCGGGCGTTCGGCAACCTGGTTTTCAAG
CAGCTAGGATCGTAAAGGGCACGCTGTTTGGCTCGGAGTATGTGATGCCG
AGTGAATGCCGAGAGGGGGACGATGCAAACAACAACCCATCGACATAGCA
ACAACAGTGATGTGAAAACTGGAAAGTAACGAGCTCCCCGAAACCACGCC
GATGCCCAGGGGAATTCGAGAGGGCGTCGCAGGCTTTCGGAAACAAGAGC
TGGCCTGCTGCAGCGGCGGCAGGCTCCGTTCCGGGCGGCCTCTACTCCCG
AGCCCGGTTCCTTGGGTGGTACTCCCTCTTCCTTGCGGGTGAAAGGCGGC
GCGAGGTGAGGTTTGTGTAGACTTACCGGACTCCACTCGACGCAGAACAA
GAACCAGAACCGACTCATAGGGCTCGGAAGAGACTATCACGACGATCTAG
AATTTTGGAGGTGGGGCGATAGACCAAGAACTTTGCTTGCGGTCGGCGAG
ACGTTGAGCGCCCCTTGTTACGCTGCGATCAAACGCCAGGCCAAGAGGAA
CTACCTGCCAGACGTGAGCTTTGACGCAGTGGGTGGCCGGCTACTGCCAA
GAACTCAGATTTTTCTGGAGATGCGAACTACGCCTTGCCTTCTCGGCTGA
ACTAAAACGCGAGGCCGCATGCCGCGAGATGAGCAGTACCACCATCAATC
TCCTCCAACTGATCGGGGTGGTCCTGAACGCGTGGGTGCTGCACTAGTTA
GTAGGAGACCGTCCAGAAACTAAGGGCGATCCCTTTCGGATGCGACTTCG
CGGCATTCACGTGGTCGAAACGCTGCGGTGATGCGAAAGATAAACGCATG
CGCTTCTGGTAGTAACAGGCCAAGGGTGTACGTTCCGAAGAACTTGACGG
GCACAGTCGTGTTGTACGATTTGGTCTGTGGTGCGACGTGCAGCAGCAGC
AGCAGCAGCAGCGAGCGGGTCACCTCTTTCCTCGATGGTGGCATGCCCGG
GGTGTTTGATTACCTCTCGTGTACTTGGCTTGTTTTACGTGGAGGCCGCA
ACGCCCGATGGACAAGGCCCGCCTGCTGATGCTCGACAAGGATCGAGCAC
ACATCACCGACCAGTCCGCAAAGCAAATCACCTCGATGTCGGACTGGAAA
GTGGAGCACTTGTTCCCCCCCTTGCCCGAAGGCGTCGTCCCCACAGCCAC
GCCGGCAAAGTGGTCGATGATGTGTGCTCGATCCTTGTTGAGCATCAGCA
GGCGGGCCTTGTCCATCGGGCGGCCGACGACGTTGTAGCCTCCGCGTAGC
ACGAAGTCCTTGGGCCTTGCTGTCGAGTTCCATAGCTCGGAAAGTCTCTT
GTCGGTTTGCTTCACACCGGCGCTCTTTGGGTTGGGTGGAGCGGCTGGCA
CGGCGGCAGCCGGGACAGCTGGCGCCGGAAGCCGTGGGGGTGGGCGTAGG
CCACCAGCGGGTTGAAGGACGGCCCGGCTGTGCCTGTTGCGGCGGCTGCT
GCTGCTGCTGCTGTAGCGCCAGGATGGCCTGCTGATGCTGCTGACCTGCC
AGGAGTTGTTGGAGAGTCGCCTCTAAGTTGTTGGCGATGGCGCTATTTGC
ACCGCCTCCGCCTCCGACGTCTCCTCCCCCGGCATCTTCAACGGCAAACG
TCGCATCGATAACTTCCGCCTCGCCTTCTCCTGTCTCTGCCATGGCTTGC
ACCTCCCCATCCGCGGCGGCTGCGACGCCGTTCTTGTTGTTGTCGGCCGC
CGCCGCGGCCGCCACGGCTGCGGCGACGGGTGGACATGACGGAAAGTCGA
CCAATTCCTATAATCCACAGATATCCTCCTCACTCGTAAATCTGTAAGCT
ATTCACAGGGTCTGCTACCAACACGGTGCTCGTCCACTGTCTAGAAGTAT
TTGTCCGAATCCCTAGTGGTATCTTGCCTGTGATCCGAGCGACCTCGAGT
TCTCGCTTGGGTGTGTCCCAGATACAGCAGTTTCCTCTCGAAACGTTTTT
TTTTCAACCGTTACTGTGCCAAGAACTGTTGTTCTGCGAGGGGGGCGGGA
GTGGGGGTACAGCCACCTCCTTTGTGCTCTGATTGCGTTGTGATGGATCA
CGTTTGTCGGCAGGAGGAGTCGCAACTGACCGACGCTCTTCAGCGGCGAA
GACTGGTCAACCCGCACCTCAAGACGCTCCACGCAGAACTGTCGCAGTGC
GATCAGGCCGGGACTCTCGATGCCTTCGGCCTATACATGTGAGATCTGGT
TATGATTTGGTTCGGTTGTTGTTGTTGTTGTTATTATTGTTGTATCGTTT
TTGTGATGGGCAGGAAGACAGTCCCCTTGTTGCCTTGTTGGCACATCGGA
GTCGTTCCAATCGTGCTTACACTCACAGTAGTCGAGCAAGAACGGGGTGC
TCAACGCCTTGGAGCCTTCCATGAAACCCGCGGTAAAGCACAATTTTGTT
TTATCTCAGAAAAGCTTGTTCACGCGTGAAGGCGTCTTCAACATTCAGGG
GACAATAACTTACCATCCCCGGGGTCAATGGAGGCGTTCGCGCCACACGT
TTTTTTTTCTGGAGGGTATGCGTAGCAGCAGAAATGGTGTGCACGACAAG
ACGGCGAACAAGCCGGGGATAGCGTCCCTTCGACGTGACAGTGGAGGTCT
TGCCGTGTTGAGACTAGGCTTGGCGTTGGTGTCGGTCGGGCATGACTTGA
CATGACTCTCGGGAGTAGGGTGTCGCAGGATTGACAGCAGACAGGTAACA
ACCTTTTTCTTACGGATCCCATGGTCGCGTGTGTTCACGCAGAAGATGCT
GTGTCTGGCCCCAAGATGCTCGTGATGTACTTTTCGCTTGTAGTTTGAGA
GTTTCGAGCACATACCCCGCCCTATGTACCACTCAAGGCCATCAATCACT
TCTTGACCTGTCTCAGATACGCCGCCGTCCTCAAGGCCCTGCGAGAGGAA
GGGCGTGGGGGTGCAGGGGGCACGGGAGGAAATACCCCAACCCCTAGAAC
GCCTCACTCAAGCGGTGGTGGCGGCGGTGCAAATTCTCTTGGTGGGAGTG
GCGGTGGAGCTTTCGTGACGCCGAGAGCACGAGCTCCATCGGGCGGCAGG
GGTGACGCGACCGGTATGCATAAGGGGGTGGGGTTTTATTTTGTGTGTGT
GTGCGGTTGTGAGAATGTTGGTTTATGGTTTTCTGGGGTGAAGCGTCAGG
AGTTTCTCGTTTTGTATCTCGTTTTGGCATTCTTTTTTCAGTTTTTGGAA
TGATGCCATCTGTATGAGCAGGTTACCAACACATCATCCTTCGGCCGGGA
ATGGTTCGCCCATGCCTTCACCTCTACCGCCTTTGGTGTATTGATCGAGG
CGGTTTATGCCTGATACAGCCTGCTCACGGCATTGGCACAAAGCCGCTTC
TTAATCCAGAATTATTTATCCCAACACGCGACTTGCCCGTTCTTTGTCGC
ACCCGCGGGGCCCCTTGGCTCTGCATTCCGTTTCGTTTCCTCGCAATTTT
CTTTGAACCGGCTGGTCTGTGTGTGTCCCGCTGTCTAGGAGGAGGGGGAG
GAACGACGTCAACCGAGAAGACCGCGGTGACGACTGCGACAGCCCAGGAG
GTTTTGGCT
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Coding sequence (CDS) from alignment at chr_00:12952107..12959515-

>Ec-00_007980.3 ID=Ec-00_007980.3|Name=Ec-00_007980.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=861bp|location=Sequence derived from alignment at chr_00:12952107..12959515- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGACATCGACACGCCGCGCCCTGGGGAAAGGGACGGGGCCTCTGCATC
GGCATCGTTCGCAACGACATCCGGGCCGAAGATGCCTCCAACCGCGGAGA
TACGCAGGGCTCTGCTGGGCGCAGTGGAGGAGCTGTCCAACCACGGCCTC
AAGCTCGCCACGAAATGGGCTACTGAGCAGCTGGTCGGTCTGCCTGACGA
TGAGGCGCCCGACGACTTGCGGTACGCGGCGGAACCAAACCCAGCCACCC
CTCAGAAGCAGGAAGGGGGGGCGAATCTGCGGCTTCAGGGCCGCGTAGCG
TTTGCGAAGTCCCTGATGGATGTCGGGGAATTCGAGAGGGCGTCGCAGGC
TTTCGGAAACAAGAGCTGGCCTGCTGCAGCGGCGGCAGGCTCCGTTCCGG
GCGGCCTCTACTCCCGAGCCCGGTTCCTTGGGTGGTACTCCCTCTTCCTT
GCGGGTGAAAGGCGGCGCGAGGAGTCGCAACTGACCGACGCTCTTCAGCG
GCGAAGACTGGTCAACCCGCACCTCAAGACGCTCCACGCAGAACTGTCGC
AGTGCGATCAGGCCGGGACTCTCGATGCCTTCGGCCTATACATATACGCC
GCCGTCCTCAAGGCCCTGCGAGAGGAAGGGCGTGGGGGTGCAGGGGGCAC
GGGAGGAAATACCCCAACCCCTAGAACGCCTCACTCAAGCGGTGGTGGCG
GCGGTGCAAATTCTCTTGGTGGGAGTGGCGGTGGAGCTTTCGTGACGCCG
AGAGCACGAGCTCCATCGGGCGGCAGGGGTGACGCGACCGGAGGAGGGGG
AGGAACGACGTCAACCGAGAAGACCGCGGTGACGACTGCGACAGCCCAGG
AGGTTTTGGCT
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Synonyms
The feature 'Ec-00_007980.3' has the following synonyms
Synonym
Esi0589_0001
Esi_0589_0001