Ec-00_007970.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_007970.1
Unique NameEc-00_007970.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length435
Homology
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BLAST of Ec-00_007970.1 vs. uniprot
Match: D7G4Y8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Y8_ECTSI)

HSP 1 Score: 866 bits (2238), Expect = 0.000e+0
Identity = 434/434 (100.00%), Postives = 434/434 (100.00%), Query Frame = 1 
Query:    1 MQGGDCGRRQANHNGASKNGPPDGEPRLPDAQLVDEPEAPQRQDGKSVPGMHGSKEGPRQPQIRHCQERAFDGLREDLALVASIKKKQEHLKMSRALGVVVPRYPNPLDEVTFDRVEGCGMDVLHQSALNAGKKIMTFVLDALDSAGSEIVRGRFAWRRMLPPNVSPMADITSAGGWAALTGQQLWLVSSIFPFLVAPIFSHPNLLDDYVRAMVVAEVADRIDVNSGTPAGKAAVCAAFQDLIKACSWSSFVVRSPSFTAEGLRTLQKSQIDQVKQVTRVMGVALGSIHKGLHIARNVVVNGVVTNCNVGEAKNKQQKASAPSASGRDNAEHMWHTTNDSLAMQALADGVEWTASGWTGRKWETRTVTAGDLCRVTLQDVFAVLPLAPAQSDTVSAGRPWGYVEWEQNLVGTEAPVQGVGGADWQSVVSVWGGI 1302
            MQGGDCGRRQANHNGASKNGPPDGEPRLPDAQLVDEPEAPQRQDGKSVPGMHGSKEGPRQPQIRHCQERAFDGLREDLALVASIKKKQEHLKMSRALGVVVPRYPNPLDEVTFDRVEGCGMDVLHQSALNAGKKIMTFVLDALDSAGSEIVRGRFAWRRMLPPNVSPMADITSAGGWAALTGQQLWLVSSIFPFLVAPIFSHPNLLDDYVRAMVVAEVADRIDVNSGTPAGKAAVCAAFQDLIKACSWSSFVVRSPSFTAEGLRTLQKSQIDQVKQVTRVMGVALGSIHKGLHIARNVVVNGVVTNCNVGEAKNKQQKASAPSASGRDNAEHMWHTTNDSLAMQALADGVEWTASGWTGRKWETRTVTAGDLCRVTLQDVFAVLPLAPAQSDTVSAGRPWGYVEWEQNLVGTEAPVQGVGGADWQSVVSVWGGI
Sbjct:    1 MQGGDCGRRQANHNGASKNGPPDGEPRLPDAQLVDEPEAPQRQDGKSVPGMHGSKEGPRQPQIRHCQERAFDGLREDLALVASIKKKQEHLKMSRALGVVVPRYPNPLDEVTFDRVEGCGMDVLHQSALNAGKKIMTFVLDALDSAGSEIVRGRFAWRRMLPPNVSPMADITSAGGWAALTGQQLWLVSSIFPFLVAPIFSHPNLLDDYVRAMVVAEVADRIDVNSGTPAGKAAVCAAFQDLIKACSWSSFVVRSPSFTAEGLRTLQKSQIDQVKQVTRVMGVALGSIHKGLHIARNVVVNGVVTNCNVGEAKNKQQKASAPSASGRDNAEHMWHTTNDSLAMQALADGVEWTASGWTGRKWETRTVTAGDLCRVTLQDVFAVLPLAPAQSDTVSAGRPWGYVEWEQNLVGTEAPVQGVGGADWQSVVSVWGGI 434
[Close]
BLAST of Ec-00_007970.1 vs. uniprot
Match: D7FWW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWW9_ECTSI)

HSP 1 Score: 595 bits (1534), Expect = 1.290e-208
Identity = 295/360 (81.94%), Postives = 323/360 (89.72%), Query Frame = 1 
Query:  205 RAFDGLREDLALVASIKKKQEHLKMSRALGVVVPRYPNPLDEVTFDRVEGCGMDVLHQSALNAGKKIMTFVLDALDSAGSEIVRGRFAWRRMLPPNVSPMADITSAGGWAALTGQQLWLVSSIFPFLVAPIFSHPNLLDDYVRAMVVAEVADRIDVNSGTPAGKAAVCAAFQDLIKACSWSSFVVRSPSFTAEGLRTLQKSQIDQVKQVTRVMGVALGSIHKGLHIARNVVVNGVVTNCNVGEAKNKQQKASAPSASGRDNAEHMWHTTNDSLAMQALADGVEWTASGWTGRKWETRTVTAGDLCRVTLQDVFAVLPLAPAQSDTVSAGRPWGYVEWEQNLVGTEAPVQGVGGADWQSVV 1284
            R  DGLREDL+ VA+ +KKQ+  K+SRALGVVVPRYPNP DEV FDRVEGCGMD+LHQSALN+GKKIM FV+DALD AGSEIVR RFAW RMLPPNVSPMADITSAGGW+ALTGQQLWLVSS FPFL+APIFS P+ L  YVR MVV EVADRI V+ GTPAGKAAVC AFQDL+KACSWS FVVRSPSFTAEGLR LQKSQ++QVKQ TRVMGVALG+IHKGLHIARNVVVNGVVTNCNVGEAKNK+ KASAPSASGRDNA H+W  TNDSLA++ALAD +EWTASGWTG KWE RTVTAGDLCR TLQD+F+VL LAPA SDT+SAGRPWGYVEW+++LVGTEAP+ GV GADWQSVV
Sbjct:   80 RTADGLREDLSRVAATEKKQDRDKLSRALGVVVPRYPNPQDEVAFDRVEGCGMDILHQSALNSGKKIMGFVMDALDPAGSEIVRARFAWCRMLPPNVSPMADITSAGGWSALTGQQLWLVSSSFPFLLAPIFSSPDNLGRYVRTMVVTEVADRISVDPGTPAGKAAVCNAFQDLVKACSWSCFVVRSPSFTAEGLRALQKSQLEQVKQATRVMGVALGTIHKGLHIARNVVVNGVVTNCNVGEAKNKELKASAPSASGRDNARHIWRATNDSLAIKALADAIEWTASGWTGSKWERRTVTAGDLCRQTLQDLFSVLLLAPALSDTLSAGRPWGYVEWDEDLVGTEAPLTGVDGADWQSVV 439
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BLAST of Ec-00_007970.1 vs. uniprot
Match: D7FSA9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSA9_ECTSI)

HSP 1 Score: 444 bits (1142), Expect = 6.090e-153
Identity = 230/240 (95.83%), Postives = 231/240 (96.25%), Query Frame = 1 
Query:  367 VLHQSALNAGKKIMTFVLDALDSAGSEIVRGRFAWRRMLPPNVSPMADITSAGGWAALTGQQLWLVSSIFPFLVAPIFSHPNLLDDYVRAMVVAEVADRIDVNSGTPAGKAAVCAAFQDLIKACSWSSFVVRSPSFTAEGLRTLQKSQIDQV--KQVTRVMGVALGSIHKGLHIARNVVVNGVVTNCNVGEAKNKQQKASAPSASGRDNAEHMWHTTNDSLAMQALADGVEWTASGWTGR 1080
            +L QSALNAGKKIMTFVLDALDSA SEIVRGRFAWRRMLP NV PMADITSAGGWAALTGQQLWLVSSIFPFLVAPIFSHPNLLDDYVRAMVVAEVADRIDVNSGTPAGKAAVCAAFQDLIKACSWSSFVVRSPSFTAEGL TLQKSQIDQV  KQVTRVMGVALGSIHKGLHIA NVVVNGVVTNCNVGEAKNKQQKASAPSASGRDNAEHMW TTNDSLAMQALADGVEWTASGWTGR
Sbjct:    4 LLTQSALNAGKKIMTFVLDALDSAVSEIVRGRFAWRRMLPQNVLPMADITSAGGWAALTGQQLWLVSSIFPFLVAPIFSHPNLLDDYVRAMVVAEVADRIDVNSGTPAGKAAVCAAFQDLIKACSWSSFVVRSPSFTAEGLGTLQKSQIDQVQVKQVTRVMGVALGSIHKGLHIAPNVVVNGVVTNCNVGEAKNKQQKASAPSASGRDNAEHMWRTTNDSLAMQALADGVEWTASGWTGR 243
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BLAST of Ec-00_007970.1 vs. uniprot
Match: D7FZI4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZI4_ECTSI)

HSP 1 Score: 445 bits (1145), Expect = 4.990e-150
Identity = 226/231 (97.84%), Postives = 229/231 (99.13%), Query Frame = 1 
Query:  205 RAFDGLREDLALVASIKKKQEHLKMSRALGVVVPRYPNPLDEVTFDRVEGCGMDVLHQSALNAGKKIMTFVLDALDSAGSEIVRGRFAWRRMLPPNVSPMADITSAGGWAALTGQQLWLVSSIFPFLVAPIFSHPNLLDDYVRAMVVAEVADRIDVNSGTPAGKAAVCAAFQDLIKACSWSSFVVRSPSFTAEGLRTLQKSQIDQVKQVTRVMGVALGSIHKGLHIARNVV 897
            R+ DGLREDLALVASI+K+QE LKMSRALGVVVPRYPNPLDEVTFDRVEGCGMDVLHQSALNAGKKIMTFVLDALDSAGSEIVRGRFAWRRMLPPNVSPMADITSAGGWAALTGQQLWLVSSIFPFLVAPIFSHPNLLDDYVRAMVVAEVADRIDVNSGTPAGKAAVCAAFQDLIKACSWSSFVVRSPSFTAEGLRTLQKSQIDQVKQVTRVMGVALGSIHKGLHIARNVV
Sbjct:  174 RSADGLREDLALVASIEKRQEQLKMSRALGVVVPRYPNPLDEVTFDRVEGCGMDVLHQSALNAGKKIMTFVLDALDSAGSEIVRGRFAWRRMLPPNVSPMADITSAGGWAALTGQQLWLVSSIFPFLVAPIFSHPNLLDDYVRAMVVAEVADRIDVNSGTPAGKAAVCAAFQDLIKACSWSSFVVRSPSFTAEGLRTLQKSQIDQVKQVTRVMGVALGSIHKGLHIARNVV 404
[Close]
BLAST of Ec-00_007970.1 vs. uniprot
Match: A0A6H5K975_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K975_9PHAE)

HSP 1 Score: 444 bits (1141), Expect = 5.290e-149
Identity = 233/321 (72.59%), Postives = 255/321 (79.44%), Query Frame = 1 
Query:  274 KMSRALGVVVPRYPNPLDEVTFDRVEGCGMDVLHQSALNAGKKIMTFVLDALDSAGSEIVRGRFAWRRMLPPNVSPMADITSAGGWAALTGQQLWLVSSIFPFLVAPIFSHPNLLDDYVRAMVVAEVADRIDVNSGTPAGKAAVCAAFQDLIKACSWSSFVVRSPSFTAEGLRTLQKSQIDQVKQVTRVMGVALGSIHKGLHIARNVVVNGVVTNCNVGEAKNKQQKASAPSASGRDNAEHMWHTTNDSLAMQALADGVEWTASGWTGRKWETRTVTAGDLCRVTLQDVFAVLPLAPAQSDTVSAGRPWGYVEWEQNLVGT 1236
            K+SRALGVVVPRYPNPLDEV FDRVEGCGMD+LHQSALN+GKKIM FV+DALD AGSEIV                  DITSAGG +ALTGQQLWLVSSI PFL+APIFS P+ L  YVR MVV EVADRI V  GTPAGKAAVC AFQDL+KACSWS FVVRSPSFTAEGL  LQKSQ +QVKQ TRV+GVALG+IHKGLHI RNVVVNGVVTNCNVGEAKNK+ KASAPSASGRDNA H+W  TNDSLA++ALADG+EWTASG              DLCR TL++VF+VLPLAPA SDT SAGRPW   +W+  + GT
Sbjct:   41 KLSRALGVVVPRYPNPLDEVAFDRVEGCGMDILHQSALNSGKKIMGFVMDALDPAGSEIV-----------------PDITSAGGRSALTGQQLWLVSSIVPFLLAPIFSSPDNLGRYVRTMVVTEVADRISVEPGTPAGKAAVCNAFQDLVKACSWSCFVVRSPSFTAEGLHVLQKSQQEQVKQATRVIGVALGTIHKGLHITRNVVVNGVVTNCNVGEAKNKELKASAPSASGRDNARHIWRATNDSLAIKALADGIEWTASG--------------DLCRQTLREVFSVLPLAPALSDTPSAGRPWDRADWQSVVRGT 330
[Close]
BLAST of Ec-00_007970.1 vs. uniprot
Match: A0A6H5JWC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWC7_9PHAE)

HSP 1 Score: 409 bits (1052), Expect = 3.600e-135
Identity = 214/294 (72.79%), Postives = 238/294 (80.95%), Query Frame = 1 
Query:  361 MDVLHQSALNAGKKIMTFVLDALDSAGSEIVRGRFAWRRMLPPNVSPMADITSAGGWAALTGQQLWLVSSIFPFLVAPIFSHPNLLDDYVRAMVVAEVADRIDVNSGTPAGKAAVCAAFQDLIKACSWSSFVVRSPSFTAEGLRTLQKSQIDQVKQVTRVMGVALGSIHKGLHIARNVVVNGVVTNCNVGEAKNKQQKASAPSASGRDNAEHMWHTTNDSLAMQALADGVEWTASGWTGRKWETRTVTAGDLCRVTLQDVFAVLPLAPAQSDTVSAGRPWGYVEWEQNLVGTEA 1242
            M +L QSALN+GKKIM FV+DALD AGSEIVR R                   AGG +ALT QQLWLV SIFPFL+APIFS P+ L  YVRAMV  EVADRI V   TPAGKAAVC AFQDL+KACSWS FVVRSPSFTAEGL  LQ SQ +QVKQ TRV+ VALG+IHKGL IARN+VVNGVVTNCNVGEAKNK+ KASAPSASGR+NA H+W  TNDSLA+++LADG+EWTASGWTG KWE RTVTAGDLCR TLQDVF+VLPLAPA SDT+SAGR WG VEW+++L+GTEA
Sbjct:    1 MLLLTQSALNSGKKIMGFVMDALDPAGSEIVRAR-------------------AGGGSALTSQQLWLVPSIFPFLLAPIFSSPDNLGRYVRAMVAMEVADRISVEPVTPAGKAAVCNAFQDLVKACSWSCFVVRSPSFTAEGLHVLQNSQQEQVKQATRVIRVALGTIHKGLDIARNLVVNGVVTNCNVGEAKNKELKASAPSASGRNNARHIWRATNDSLAIKSLADGIEWTASGWTGSKWERRTVTAGDLCRQTLQDVFSVLPLAPALSDTLSAGRSWGNVEWDEDLLGTEA 275
[Close]
BLAST of Ec-00_007970.1 vs. uniprot
Match: A0A6H5KR91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR91_9PHAE)

HSP 1 Score: 358 bits (920), Expect = 1.020e-118
Identity = 195/308 (63.31%), Postives = 217/308 (70.45%), Query Frame = 1 
Query:  361 MDVLHQSALNAGKKIMTFVLDALDSAGSEIVRGRFAWRRMLPPNVSPMADITSAGGWAALTGQQLWLVSSIFPFLVAPIFSHPNLLDDYVRAMVVAEVADRIDVNSGTPAGKAAVCAAFQDLIKACSWSSFVVRSPSFTAEGLRTLQKSQIDQVKQVTRVMGVALGSIHKGLHIARNVVVNGVVTNCNVGEAKNKQQKASAPSASGRDNAEHMWHTTNDSLAMQALADGVEWTASGWTGRKWETRTVTAGDLCRVTLQDVFAVLPLAPAQSDTVSAGRPWGYVEWEQNLVGTEAPVQGVGGADWQSVV 1284
            M +L QSALN+ KKI+ F++DA D AGSEIVR RFAWRRMLPPNVSP+ADIT                  IFPFL+APIFS P+ L  YVR MVV EVADRI V   TPAGK AVC  FQ L+KACSWS F VRS S TAEG   LQ+SQ +QVKQ TRV+GVALG+IHKGLHIARNVVVNG VTNCNV EAKNK+ KASAPSASGRDNA H+W  TNDS A++ALADG+EWT SGWTG KWE  TVTAGD CR TLQD                         W+++LVGTE  + GV  ADWQSVV
Sbjct:    1 MLLLTQSALNSDKKIVGFLMDARDPAGSEIVRARFAWRRMLPPNVSPIADITH-----------------IFPFLLAPIFSSPDNLGRYVRTMVVTEVADRISVEPDTPAGKEAVCNTFQYLVKACSWSCFEVRSQSLTAEGFHVLQQSQQEQVKQATRVIGVALGTIHKGLHIARNVVVNGDVTNCNVEEAKNKELKASAPSASGRDNARHIWRATNDSFAIKALADGIEWTTSGWTGSKWERGTVTAGDPCRQTLQD-------------------------WDEDLVGTETALTGVDRADWQSVV 266
[Close]
BLAST of Ec-00_007970.1 vs. uniprot
Match: A0A6H5KPX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPX4_9PHAE)

HSP 1 Score: 186 bits (473), Expect = 1.340e-52
Identity = 102/188 (54.26%), Postives = 120/188 (63.83%), Query Frame = 1 
Query:  205 RAFDGLREDLALVASIKKKQEHLKMSRALGVVVPRYPNPLDEVTFDRVEGCGMD--------------------------------------------------VLHQSALNAGKKIMTFVLDALDSAGSEIVRGRFAWRRMLPPNVSPMADITSAGGWAALTGQQLWLVSSIFPFLVAPIFSHPNLL 618
            R  DGL+EDL  VA+ +KKQ+ +K+SRALGVVVPRYPNPL EV  DRV+GCGMD                                                  +  +SALN+GKKIM FV+DALD  G+E+VR RFAWRRMLPPNVSP+ADITSAGG +ALTGQQLWLV+SIFPFL+APIFS P+ L
Sbjct:   75 RTADGLKEDLDRVAATEKKQDRVKLSRALGVVVPRYPNPLHEVAIDRVDGCGMDGTQMPQVHIGRVADLVSQFSYTHKRDHIALLICSQNEQSDARITSQAACALTGESALNSGKKIMGFVMDALDPTGTEVVRARFAWRRMLPPNVSPIADITSAGGRSALTGQQLWLVASIFPFLLAPIFSSPDNL 262
[Close]
BLAST of Ec-00_007970.1 vs. uniprot
Match: D7FWW6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWW6_ECTSI)

HSP 1 Score: 136 bits (343), Expect = 5.780e-31
Identity = 104/358 (29.05%), Postives = 173/358 (48.32%), Query Frame = 1 
Query:  232 LALVASIKKKQEHLKMSRALGVVVPRYPNPLDE-VTFDRVEGCGMDVLHQSALNAGKKIMTFVLDALDSA-GSEIVRGRFAWRRMLPPNVSPMADITSAGGWAALTGQQLWLVSSIFPFLVAPIFSHPNLLDDYVRAMVVAEVADRIDVNSGTPAGKAAVCAAFQDLIKACSWSSFVVRSPSFTAEGLRTLQKSQIDQVKQVTRV---MGVALGSIHKGLHIARNVVVNGVVTNCNVGEAKNKQQKASAPSASGRDNAEHMWHTTNDSLAMQALADGVEWTASGW--TGRKWETRTVTAGDLCRVTLQDVFAVLPLAPAQSDTVSAGRPWGYVEWEQNLVGTEAPVQGVGGADWQSVV 1284
            L ++++     +   +S   GV      NP  + V  + V   G+DV HQ A N+  KI   +L  L  A G  ++        +      P+ D  S GG++AL+G  +W +SS+   +  P+      +     A    ++   +   + T      V    + L+ A S ++ ++RS SF  E + ++ + Q ++V  ++ +    G  L S H+GLH A+N    G +++C+ GE+++K  K+ A +ASGRDN EH+    ND++A +A+A+GV WTA G+  T R W  +TV A   CR  L+ + +   +   +  T   GRP G VEW   L G +A      G  WQ  +
Sbjct:  536 LKVISTATTGTQRQALSSKHGVTPQEVENPFRKHVHLNMVRTFGIDVFHQDAQNSLLKIFKRLLGGLSKAKGVPLLSCLAKDPSLRVAGTPPLRDFVSDGGFSALSGMDVWRLSSVALLVFRPVLRSVASMKRLTTAPFRNDIRAELGATTDTVVTDTEVMEKLRALLLASSKATHLLRSSSFNDETVASIDRLQREKVSLMSMLGDKHGGRLCSNHQGLHFAKNATDYGELSDCHAGESRHKSFKSCAKTASGRDNEEHIVRRENDAMAAEAMAEGVRWTAWGYDKTKRGWVKKTVQASPACRELLRTI-SEWEIGARRHGT---GRPRGIVEWNVRL-GRQAAAPSAQG--WQETI 886
[Close]
BLAST of Ec-00_007970.1 vs. uniprot
Match: A0A6H5LGI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LGI1_9PHAE)

HSP 1 Score: 124 bits (310), Expect = 7.850e-27
Identity = 63/100 (63.00%), Postives = 76/100 (76.00%), Query Frame = 1 
Query:  319 PLDEVTFDRVEGCGMDVLHQSALNAGKKIMTFVLDALDSAGSEIVRGRFAWRRMLPPNVSPMADITSAGGWAALTGQQLWLVSSIFPFLVAPIFSHPNLL 618
            PL ++      GC  ++   + L     IM FV+DALD AGS+IVR RFAWRRMLP NVSP+ADITSAGGW+ALTGQQLW+VSSIFPFL+AP+FS P+ L
Sbjct:  579 PLMKIIRRLQNGCKAEISVGTKLTV--TIMGFVMDALDPAGSDIVRARFAWRRMLPRNVSPIADITSAGGWSALTGQQLWIVSSIFPFLLAPMFSSPDNL 676
The following BLAST results are available for this feature:
BLAST of Ec-00_007970.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
D7G4Y8_ECTSI0.000e+0100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FWW9_ECTSI1.290e-20881.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FSA9_ECTSI6.090e-15395.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FZI4_ECTSI4.990e-15097.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K975_9PHAE5.290e-14972.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JWC7_9PHAE3.600e-13572.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KR91_9PHAE1.020e-11863.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KPX4_9PHAE1.340e-5254.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWW6_ECTSI5.780e-3129.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LGI1_9PHAE7.850e-2763.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:12940925..12946157 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Length1305
Hectar predicted targeting categoryother localisation
Gene idEc-00_007970.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_007970Ec-00_007970Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 12940925..12946157 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_007970.1Ec-00_007970.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 12940925..12946157 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_007970.1.6Ec-00_007970.1.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 12940925..12941325 -
Ec-00_007970.1.5Ec-00_007970.1.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 12942090..12942174 -
Ec-00_007970.1.4Ec-00_007970.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 12943391..12943591 -
Ec-00_007970.1.3Ec-00_007970.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 12944280..12944519 -
Ec-00_007970.1.2Ec-00_007970.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 12945063..12945397 -
Ec-00_007970.1.1Ec-00_007970.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 12946115..12946157 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_007970.1CDS:Ec-00_007970.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 12940925..12941325 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_007970.1 ID=Ec-00_007970.1|Name=Ec-00_007970.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=435bp
MQGGDCGRRQANHNGASKNGPPDGEPRLPDAQLVDEPEAPQRQDGKSVPG
MHGSKEGPRQPQIRHCQERAFDGLREDLALVASIKKKQEHLKMSRALGVV
VPRYPNPLDEVTFDRVEGCGMDVLHQSALNAGKKIMTFVLDALDSAGSEI
VRGRFAWRRMLPPNVSPMADITSAGGWAALTGQQLWLVSSIFPFLVAPIF
SHPNLLDDYVRAMVVAEVADRIDVNSGTPAGKAAVCAAFQDLIKACSWSS
FVVRSPSFTAEGLRTLQKSQIDQVKQVTRVMGVALGSIHKGLHIARNVVV
NGVVTNCNVGEAKNKQQKASAPSASGRDNAEHMWHTTNDSLAMQALADGV
EWTASGWTGRKWETRTVTAGDLCRVTLQDVFAVLPLAPAQSDTVSAGRPW
GYVEWEQNLVGTEAPVQGVGGADWQSVVSVWGGI*
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spliced messenger RNA

>Ec-00_007970.1 ID=Ec-00_007970.1|Name=Ec-00_007970.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1305bp|location=Sequence derived from alignment at chr_00:12940925..12946157- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGCAAGGCGGAGATTGCGGTCGGAGACAAGCAAACCATAACGGCGCTAG
TAAGAATGGGCCTCCTGACGGCGAACCTCGACTCCCCGATGCACAGCTTG
TGGACGAACCAGAAGCACCACAACGCCAAGACGGAAAGAGCGTGCCAGGC
ATGCACGGTTCCAAGGAAGGACCTCGGCAACCCCAGATACGACATTGTCA
AGAACGCGCGTTCGATGGACTGAGGGAGGACCTGGCGCTCGTTGCCTCCA
TCAAAAAGAAGCAGGAGCATCTGAAGATGTCAAGAGCCCTGGGCGTGGTC
GTGCCCCGGTATCCCAACCCCCTGGACGAGGTCACTTTCGACCGCGTAGA
GGGGTGCGGCATGGACGTTTTGCACCAGTCTGCGCTTAACGCGGGCAAGA
AGATAATGACCTTTGTGCTGGACGCTCTGGATTCTGCTGGTTCCGAGATT
GTGCGTGGTCGGTTTGCATGGCGCCGGATGCTGCCCCCGAACGTTTCGCC
GATGGCCGACATCACCAGTGCTGGCGGTTGGGCGGCCTTGACTGGTCAAC
AGTTGTGGCTCGTTTCCAGTATCTTCCCCTTCCTCGTCGCACCAATTTTC
TCCCATCCTAATCTTCTGGACGACTATGTTCGGGCCATGGTCGTTGCAGA
GGTGGCAGATCGCATCGATGTGAACTCAGGCACCCCCGCTGGCAAGGCGG
CTGTGTGCGCCGCATTCCAAGACCTCATCAAGGCTTGCAGCTGGAGCTCT
TTCGTGGTGCGCTCACCTTCCTTTACTGCCGAAGGCTTGCGTACTTTGCA
AAAGTCCCAAATCGACCAGGTCAAGCAAGTCACTCGCGTGATGGGGGTTG
CTCTCGGTTCCATCCACAAAGGGCTTCACATCGCTCGCAATGTGGTCGTC
AACGGCGTTGTGACGAATTGCAACGTCGGAGAGGCAAAGAACAAGCAGCA
GAAAGCATCGGCTCCTTCGGCGAGTGGACGAGACAACGCCGAACACATGT
GGCATACTACGAACGACAGCTTAGCTATGCAAGCGCTGGCGGACGGCGTC
GAGTGGACGGCCTCGGGTTGGACTGGAAGGAAGTGGGAAACCCGAACGGT
CACGGCTGGCGATCTCTGTCGGGTCACCCTCCAGGACGTATTCGCAGTCC
TGCCGCTCGCGCCCGCTCAGTCAGACACGGTGTCGGCGGGACGGCCATGG
GGCTATGTGGAGTGGGAACAAAACCTTGTCGGAACGGAGGCACCAGTTCA
GGGAGTAGGTGGAGCTGACTGGCAATCTGTTGTAAGTGTGTGGGGCGGTA
TTTGA
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protein sequence of Ec-00_007970.1

>Ec-00_007970.1 ID=Ec-00_007970.1|Name=Ec-00_007970.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=435bp
MQGGDCGRRQANHNGASKNGPPDGEPRLPDAQLVDEPEAPQRQDGKSVPG
MHGSKEGPRQPQIRHCQERAFDGLREDLALVASIKKKQEHLKMSRALGVV
VPRYPNPLDEVTFDRVEGCGMDVLHQSALNAGKKIMTFVLDALDSAGSEI
VRGRFAWRRMLPPNVSPMADITSAGGWAALTGQQLWLVSSIFPFLVAPIF
SHPNLLDDYVRAMVVAEVADRIDVNSGTPAGKAAVCAAFQDLIKACSWSS
FVVRSPSFTAEGLRTLQKSQIDQVKQVTRVMGVALGSIHKGLHIARNVVV
NGVVTNCNVGEAKNKQQKASAPSASGRDNAEHMWHTTNDSLAMQALADGV
EWTASGWTGRKWETRTVTAGDLCRVTLQDVFAVLPLAPAQSDTVSAGRPW
GYVEWEQNLVGTEAPVQGVGGADWQSVVSVWGGI*
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mRNA from alignment at chr_00:12940925..12946157-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_007970.1 ID=Ec-00_007970.1|Name=Ec-00_007970.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=5233bp|location=Sequence derived from alignment at chr_00:12940925..12946157- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGCAAGGCGGAGATTGCGGTCGGAGACAAGCAAACCATAACGGTGAGTT
TTTTGGTATATGGAGATCGGAAAGGTCGATGGATATCTTAGCTGGGTGGG
TGGAGTGGAAGGATACTTCTCGTCTGTCTGTTAGCCCCCGTGTACCTCGG
TGCATAGTGCACACAGATTACCCGGATGTTCGCGCCCCCCACAGCCCTAC
GAAACCATGCGATTCTCGAGGTATGTCGAAGAGACATGTGGCTGTGTGCT
TCAAAGCGTCTTGTACCATTTCTTACGTTTGTTGGTGGGGTACCACGAGG
GCACCAAACTGCCCATTCTGTGGACAACGACAAACAACGGCGGCGTAGAT
GGGATGGTACCTGTGTTGACATCTGCAATGTTTTTGACCTACGGAAGCCC
CAGGATCGATGCCAGCGCGTTTTCGCACGCACCGGAAGAAGGGGGGGGTA
ATGTTAGGTCGCTCAACGGTACCCCCTGGTGAACGACAGTAATGGGAGGG
GGGTTGAAGAGTTTCCTTTTATCGGCCTTTTTCAAAGTGCAACACTTTCA
CCGCATTGGTAGCACCAGTGTGAGATTTCTGGTACACAAAGTACGCGCTG
GTGCTTTGGGCCCCACCCGCATCGTACAACTGCCCCCGGTATAGGATTGC
TTGTGGCTTGGGTTGTATCACGAGCTTGGGTTGCGAGGAAACAATGCCCA
GATTTCGAACGTTCGAACAACACCCCGCCTCATTCACGCCGCTCCGCCCC
CCTTTGTCAGGCGCTAGTAAGAATGGGCCTCCTGACGGCGAACCTCGACT
CCCCGATGCACAGCTTGTGGACGAACCAGAAGCACCACAACGCCAAGACG
GAAAGAGCGTGCCAGGCATGCACGGTTCCAAGGAAGGACCTCGGCAACCC
CAGATACGACATTGTCAAGAACGCGCGTTCGATGGACTGAGGGAGGACCT
GGCGCTCGTTGCCTCCATCAAAAAGAAGCAGGAGCATCTGAAGATGTCAA
GAGCCCTGGGCGTGGTCGTGCCCCGGTATCCCAACCCCCTGGACGAGGTC
ACTTTCGACCGCGTAGAGGGGTGCGGCATGGACGTTTTGCACCAGGTACC
CAGAAACTGCAAGATTGTTTGGCTCAATATGAAATGGCTGACACATTAGT
TCAATATAGATCACACAAGCAATCACGCGTTGGACGCGCAGTTGATCTCG
TTCCCGAGTTTCCTCTAGAAACGAGCTAATTTCTTGAGACCCTTGTAAAA
GGTGGTCCCTGACGTTTGGAGATTTCTTGTCAATACTACGCGCAAAGCGT
CGCCCGGTCCCGAGCTGAGAGGCATTGTTGTTGTTGTTGTTGTTGTTGTT
GTTGTTGTCTTCACATGAAAAAAACGGATCCGCTCTCTCTACCCAGTACC
TTCATCTGTCCCTACTGATCCAACTGTTACCCCGAAAATGTAAACTCAAG
TGCATAGAACCCCGAAGGGTCCGCGATCCCATCGAACCCAGCGACATATA
GTCTGGAGCCCTCCGCTCTCCTCCAGTACGGTATGTATGCGCCCTGATGA
AGGCCCAAGTGCCGTTCAGGTCAAGTACTAACCCAGCTGACTCCACCCTG
CCCCCCTCCTCCCATGGATGTTCCTGCTGCTGACACAGTCTGCGCTTAAC
GCGGGCAAGAAGATAATGACCTTTGTGCTGGACGCTCTGGATTCTGCTGG
TTCCGAGATTGTGCGTGGTCGGTTTGCATGGCGCCGGATGCTGCCCCCGA
ACGTTTCGCCGATGGCCGACATCACCAGTGCTGGCGGTTGGGCGGCCTTG
ACTGGTCAACAGTTGTGGCTCGTTTCCAGTATCTTCCCCTTCCTCGTCGC
ACCAATTTTCTCCCATCCTAATCTTCTGGTGAGTACGGGAATATGATGAG
CAAAGACGGGTTCTGGGGTGCTTCATCAAAGAGTTGGTGTGGGTGGACAC
GCACATATGATGTCTGGCGTGTTTGACAAACGGGTAAGACATCCGATTCC
GTCAGTGCCCCACATACCCCAGATTGCCCCCCGCTGAATATGTCTAATTT
TCACATCAGCCACTGCTGTCTCGTACAGCTTCCGGACATGTAGCAAACGA
AGGCCCGATAATACGATTTACACTCTCGCGATCAGTCCGGTAATTTGTGG
TTATGTAAAAGTCGCGGCATGCCCTGGAACGTAGCAGAGTACGACTATCG
ACCGTACGACGTAGGTTGGGTCGAGGACTCGGGCCATAAAGTCGTTTGGA
TAAAAATCCTGCCGCAGAGTAGGACAGAGACAATGAACTCGCGAGGGAAG
TATTTGTGACGGTGTTTTTTGCACAGCACCCTAGGCAAGTTTTTCGAGTT
TGTACTTGCGACATCTTTACCACGTCTACGCGGCGAGAGGCGACCGAGGA
GAGAAGAGGTGCCCGGCCGGCCGACACCGGTTTCAGATTCCAGTTTTTGG
GCCGGCTGCTCTTCTCCAAGGTTATGGTCGAACTCGTCAATGTCGTCAAT
GTATACCTGCCTTGAGACTCAAGTCAAATCACACTGCCTCCTTGATTCCA
TAACCCTTTATTCCAGGACGACTATGTTCGGGCCATGGTCGTTGCAGAGG
TGGCAGATCGCATCGATGTGAACTCAGGCACCCCCGCTGGCAAGGCGGCT
GTGTGCGCCGCATTCCAAGACCTCATCAAGGCTTGCAGCTGGAGCTCTTT
CGTGGTGCGCTCACCTTCCTTTACTGCCGAAGGCTTGCGTACTTTGCAAA
AGTCCCAAATCGACCAGGTACGGACCAACGCAATTTTTTCTTGTCTTCAA
CCCCTGAGGTCTGGGAAGTTTGACCGCGTCCACTAGTCTAGCCATCCGAC
AATTGCGTGCTCCCGCCAGACGCTGTTATAGACGACGCGGATAACATGCA
CACGTTAAGCCGCCCGCCGCTCATGCGTACCGCAATCGACGGTGCCGTAT
CCCGCCCACAATGTCGCCCCCCCCCACCCCCCCTTGCAATCTCGACGAAA
AGCTGCACGAAAGCCGCGTTTGTACCCACGTATTTTTTTACCACCAACAC
AGATAGATACCCTCCTTGCTTATGTGCCTCGGGGGTAAAGTACACTTTGT
TTATCGGAGCCCCCCCCCCGGGGATTTAGGTTCCGGATTGGTTCATGAGG
GCTGCTGTATTTGTTCCACCATCACTACGCGTGGTAGGTAATGCGCGTCC
AGGGTACGTCTGTCCGGGGTTTGCTTGTCGTGGTGTTCGGATCGGTGTCG
CTGGGGATGATGTCGATTTCGTCGTCTGGCTCGGTCTGGCGAAAGCACCA
CTTTCGTGTCAAGTCACAGCTGGGACTACGAGAACAGAGTATAGCCGTGA
AAACTTTATTTTTTCGGAAGCGAGTCCATTGGTTGGGTCTGGAGCTGCAA
AAAGCAGTTTGAATAACAGGAAGCGCAACAAACACATACCGCAACGCTCG
ATAATGCGATCGTTCAGAACATGTCGATGGACAGCTTTAATAGTTCCACC
TCAAGGGTCAAGGGAGGAGAGGGAGGAGGCATTTTTGTTGCTTCTCTTGT
GTCGGCTGCCCTCCTCCGTTCTCCTCCCTGTGATGTGTCTATTGCGGAAA
CACAAAGGGTGTCAAATGGTGTCGGTTTTGCTGCTGTTCTCCCCGGGGGG
TGGTCACTCAGCGGGGTAGTCACGGGGATAAAATTGGCTGCCGTGACTCT
ACCCCCCCACCCTCTTTTTATATATACGACTCTAGTTCATCCACGGGGGT
ACGGCACCGTCGATTACGATGTCCATAGAGCTCGTTCTCTTTCTCTCCCA
CTCTCTCCCCGTATATCACCCGTTTATCTCTCTGCACCCTCCCCGTCGCA
CGCCCTTCCCTTCGGCCGGTATAGATATCACCAAACGGGTAGGCCCTTCC
GATTCCTATACAAGCGGAGAAATGTACCATTTTCAATTCCCTGATTTAGT
CGCTTTCTCTTGCGAACGTGATCCCGGGTCCAGGTCAAGCAAGTCACTCG
CGTGATGGGGGTTGCTCTCGGTTCCATCCACAAAGGGCTTCACATCGCTC
GCAATGTGGTCGTCAACGGTGAGTTCGTGAATTCAGAGACGGTTATCCTT
TTGAGCGTATTCACACGTACACACGCGGCGCCCTGTTAGCGCGACCTCCT
TTCGTCCGCAGTCCTCCCAGGGGTGTGCGTGCCTGTCCCATCTAATTGTG
TTCTGGCGCCATACGACCAACATTCTACGGGGCGCACAGGATGAAGGTCA
CATGAGAGCTTTAATAGTAGCTGCAACGCCCCGCCTTTCGAAAGTGGTAT
TTTGAATCTCCTACTTCGCCGACCACGACTGGAAGTATCCGGAAAGAAGG
GAAGGAAAAAAGACGAGCGCCGAAATGCGAACCGTTTTCAAACCATGACT
AGGTGTCGAGTTGTGTACGACCTTCGCCAACATGCAGTTGTTTTTGTATG
GCGTGCAGGCCGAAGCACCCTTAGCGATGTGGTACGCGACGAACAACCTA
CATATCCCGCTGAGCACCCCGAGCACATGTCCCTTAACCGAACGAGAAAT
AAAATTAACCCAGCCAGGCCGACTGGTAGAATATTGTGTCTTCACCACGC
CTCCTGAACCGTGGGCTCCCCATGCACACCCTCCCACAGCATCCACGCCG
CCGTGTAATATGCTTCGATGTTGTGTTTGTTGCTACGACGCTCGGCGAGC
CCTCGACGTATTTCTCCACCGATCCTCATCCTCGTCGACCATCGGACGGG
ATTCGAAACATGCGCGGTGCAACTTCCTAATCGTGTTCCCCCATGCTTGT
TGGTGCCCAAACTTGCATCGTTCGACATGCAGGCGTTGTGACGAATTGCA
ACGTCGGAGAGGCAAAGAACAAGCAGCAGAAAGCATCGGCTCCTTCGGCG
AGTGGACGAGACAACGCCGAACACATGTGGCATACTACGAACGACAGCTT
AGCTATGCAAGCGCTGGCGGACGGCGTCGAGTGGACGGCCTCGGGTTGGA
CTGGAAGGAAGTGGGAAACCCGAACGGTCACGGCTGGCGATCTCTGTCGG
GTCACCCTCCAGGACGTATTCGCAGTCCTGCCGCTCGCGCCCGCTCAGTC
AGACACGGTGTCGGCGGGACGGCCATGGGGCTATGTGGAGTGGGAACAAA
ACCTTGTCGGAACGGAGGCACCAGTTCAGGGAGTAGGTGGAGCTGACTGG
CAATCTGTTGTAAGTGTGTGGGGCGGTATTTGA
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Coding sequence (CDS) from alignment at chr_00:12940925..12946157-

>Ec-00_007970.1 ID=Ec-00_007970.1|Name=Ec-00_007970.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1305bp|location=Sequence derived from alignment at chr_00:12940925..12946157- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGCAAGGCGGAGATTGCGGTCGGAGACAAGCAAACCATAACGGCGCTAG
TAAGAATGGGCCTCCTGACGGCGAACCTCGACTCCCCGATGCACAGCTTG
TGGACGAACCAGAAGCACCACAACGCCAAGACGGAAAGAGCGTGCCAGGC
ATGCACGGTTCCAAGGAAGGACCTCGGCAACCCCAGATACGACATTGTCA
AGAACGCGCGTTCGATGGACTGAGGGAGGACCTGGCGCTCGTTGCCTCCA
TCAAAAAGAAGCAGGAGCATCTGAAGATGTCAAGAGCCCTGGGCGTGGTC
GTGCCCCGGTATCCCAACCCCCTGGACGAGGTCACTTTCGACCGCGTAGA
GGGGTGCGGCATGGACGTTTTGCACCAGTCTGCGCTTAACGCGGGCAAGA
AGATAATGACCTTTGTGCTGGACGCTCTGGATTCTGCTGGTTCCGAGATT
GTGCGTGGTCGGTTTGCATGGCGCCGGATGCTGCCCCCGAACGTTTCGCC
GATGGCCGACATCACCAGTGCTGGCGGTTGGGCGGCCTTGACTGGTCAAC
AGTTGTGGCTCGTTTCCAGTATCTTCCCCTTCCTCGTCGCACCAATTTTC
TCCCATCCTAATCTTCTGGACGACTATGTTCGGGCCATGGTCGTTGCAGA
GGTGGCAGATCGCATCGATGTGAACTCAGGCACCCCCGCTGGCAAGGCGG
CTGTGTGCGCCGCATTCCAAGACCTCATCAAGGCTTGCAGCTGGAGCTCT
TTCGTGGTGCGCTCACCTTCCTTTACTGCCGAAGGCTTGCGTACTTTGCA
AAAGTCCCAAATCGACCAGGTCAAGCAAGTCACTCGCGTGATGGGGGTTG
CTCTCGGTTCCATCCACAAAGGGCTTCACATCGCTCGCAATGTGGTCGTC
AACGGCGTTGTGACGAATTGCAACGTCGGAGAGGCAAAGAACAAGCAGCA
GAAAGCATCGGCTCCTTCGGCGAGTGGACGAGACAACGCCGAACACATGT
GGCATACTACGAACGACAGCTTAGCTATGCAAGCGCTGGCGGACGGCGTC
GAGTGGACGGCCTCGGGTTGGACTGGAAGGAAGTGGGAAACCCGAACGGT
CACGGCTGGCGATCTCTGTCGGGTCACCCTCCAGGACGTATTCGCAGTCC
TGCCGCTCGCGCCCGCTCAGTCAGACACGGTGTCGGCGGGACGGCCATGG
GGCTATGTGGAGTGGGAACAAAACCTTGTCGGAACGGAGGCACCAGTTCA
GGGAGTAGGTGGAGCTGACTGGCAATCTGTTGTAAGTGTGTGGGGCGGTA
TTTGA
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Synonyms
The feature 'Ec-00_007970.1' has the following synonyms
Synonym
Esi0588_0013
Esi_0588_0013