Ec-00_007720.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_007720.1
Unique NameEc-00_007720.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length302
Homology
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BLAST of Ec-00_007720.1 vs. uniprot
Match: D7G4M9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4M9_ECTSI)

HSP 1 Score: 496 bits (1277), Expect = 3.050e-167
Identity = 301/301 (100.00%), Postives = 301/301 (100.00%), Query Frame = 1 
Query:   82 MVRVGHFCVVAAAAADVCTAFVAPVGQAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRLALQMQSDGPSQWAGGGINVSGEAPFEIRGFSLANAAALAGLAITCASFYEYFSTGGAGGLSGIGFVYGIPIALIGLALKYAELPPAPLQTTPEAEALFEEKATETIRSIKSDVTRHRYGDEAHLDTTVKFLGLVMPQSDYPQLQYISQTIEPNGELGFTMVFQSKMTPFKRWVEPERVEKYVAFFGPGVDAEVIKVDAQEKLVAIKLTTLPPGAQPTPKVTAPPAEETVAE 984
            MVRVGHFCVVAAAAADVCTAFVAPVGQAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRLALQMQSDGPSQWAGGGINVSGEAPFEIRGFSLANAAALAGLAITCASFYEYFSTGGAGGLSGIGFVYGIPIALIGLALKYAELPPAPLQTTPEAEALFEEKATETIRSIKSDVTRHRYGDEAHLDTTVKFLGLVMPQSDYPQLQYISQTIEPNGELGFTMVFQSKMTPFKRWVEPERVEKYVAFFGPGVDAEVIKVDAQEKLVAIKLTTLPPGAQPTPKVTAPPAEETVAE
Sbjct:    1 MVRVGHFCVVAAAAADVCTAFVAPVGQAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRLALQMQSDGPSQWAGGGINVSGEAPFEIRGFSLANAAALAGLAITCASFYEYFSTGGAGGLSGIGFVYGIPIALIGLALKYAELPPAPLQTTPEAEALFEEKATETIRSIKSDVTRHRYGDEAHLDTTVKFLGLVMPQSDYPQLQYISQTIEPNGELGFTMVFQSKMTPFKRWVEPERVEKYVAFFGPGVDAEVIKVDAQEKLVAIKLTTLPPGAQPTPKVTAPPAEETVAE 301
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BLAST of Ec-00_007720.1 vs. uniprot
Match: A0A835YHW7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHW7_9STRA)

HSP 1 Score: 284 bits (727), Expect = 1.390e-85
Identity = 151/231 (65.37%), Postives = 180/231 (77.92%), Query Frame = 1 
Query:  283 QRLALQMQSD------GPSQWAGGGINVSGEAPFEIRGFSLANAAALAGLAITCASFYEYFSTGGAGGLSGIGFVYGIPIALIGLALKYAELPPAPLQTTPEAEALFEEKATETIRSIKSDVTRHRYGDEAHLDTTVKFLGLVMPQSDYPQLQYISQTIEPNGELGFTMVFQSKMTPFKRWVEPERVEKYVAFFGPGVDAEVIKVDAQEKLVAIKLTTLPPGAQPTPKVTA 957
            Q  A+++ +D      GP+Q + GGINVSGEAPFEIRGFSL NA  + G+ IT ASF EYF++GGAG LSG+GFVYGIP+ALIGLALKYAEL P  + +TP A ALFEEKATET+R IK DVTRHRYGDEAHLD+TVK LGLV+PQSDYPQLQ + + + PNGEL F+M+F S  TPFK WV+P RV KY  FFGPGV A V KV ++ +LVAIKLTT+ P A PT + +A
Sbjct:   54 QCFAMKVSNDFDDSETGPAQISAGGINVSGEAPFEIRGFSLGNAFLIGGVVITTASFAEYFTSGGAG-LSGLGFVYGIPVALIGLALKYAELAPVGVSSTPAAAALFEEKATETMRKIKKDVTRHRYGDEAHLDSTVKALGLVLPQSDYPQLQGLKEEVAPNGELAFSMIFSSPETPFKMWVDPARVRKYTTFFGPGVTASVEKVSSEARLVAIKLTTVNPDA-PTEEPSA 282
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BLAST of Ec-00_007720.1 vs. uniprot
Match: A0A7S2V4E2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4E2_9STRA)

HSP 1 Score: 273 bits (697), Expect = 2.930e-82
Identity = 142/212 (66.98%), Postives = 172/212 (81.13%), Query Frame = 1 
Query:  334 GGINVSGEAPFEIRGFSLANAAALAGLAITCASFYEYFSTGGAGGLSGIGFVYGIPIALIGLALKYAELPPAPLQTTPEAEALFEEKATETIRSIKSDVTRHRYGDEAHLDTTVKFLGLVMPQSDYPQLQYISQTIEPNGELGFTMVFQSKMTPFKRWVEPERVEKYVAFFGPGVDAEVIKVDAQEKLVAIKLTT----LPPGAQPTPKVTA 957
            GGIN+SGE PFEIRGFSL +A    G+A+T  SF E+F + G+ GLSGIGFVYGIPIAL+GL+LKYAEL P P++TTPEAEALFEEKATETI+ IKSDVTRHRYGDEAHL++TVK LGLVMPQS+YPQLQ++ + +E +GE  F+MVFQSK TPFK W EP ++ K+  FFGPGV+AEV+KV+  E+LVAIKLTT    +PP A  T +  A
Sbjct:    8 GGINLSGEPPFEIRGFSLGDAFLGVGVAVTAISFTEFFMSAGSEGLSGIGFVYGIPIALVGLSLKYAELAPVPVRTTPEAEALFEEKATETIKKIKSDVTRHRYGDEAHLESTVKALGLVMPQSEYPQLQWLDEGVE-DGEYTFSMVFQSKETPFKVWNEPAKIPKFETFFGPGVNAEVVKVNGAERLVAIKLTTGEKKVPPAATETEEAPA 218
[Close]
BLAST of Ec-00_007720.1 vs. uniprot
Match: A0A7R9UF83_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UF83_9STRA)

HSP 1 Score: 265 bits (678), Expect = 8.220e-79
Identity = 134/224 (59.82%), Postives = 170/224 (75.89%), Query Frame = 1 
Query:  319 SQWAGGGINVSGEAPFEIRGFSLANAAALAGLAITCASFYEYFSTGGAGGLSGIGFVYGIPIALIGLALKYAELPPAPLQTTPEAEALFEEKATETIRSIKSDVTRHRYGDEAHLDTTVKFLGLVMPQSDYPQLQYISQTIEPNGELGFTMVFQSKMTPFKRWVEPERVEKYVAFFGPGVDAEVIKVDAQEKLVAIKLTTLPPGAQPT--PKVTAPPAEETVAE 984
            +Q A GGIN SG+ PFEIRGFSLA      G  +T  SF EYFS GG  G+SG+GFVYGIP+ LIGL+LKYAE+PP  + TTP A+  FE+KATETI+ IK DVTRHRYGD+AHLD+T+K LGL +PQ D+P+L+Y+ Q + PNGEL F+MVF+S  TP++ W EP+R+++Y  FFGPGV+AEV K+ ++E+LVAIKLTT   G + T  P   APPA +T AE
Sbjct:   50 AQVAAGGINTSGKPPFEIRGFSLATLFLGGGFLLTVGSFAEYFSEGGGSGVSGLGFVYGIPVLLIGLSLKYAEIPPVEVVTTPAADDAFEKKATETIKQIKQDVTRHRYGDDAHLDSTLKALGLQLPQKDFPELEYLKQDVAPNGELAFSMVFRSMETPYRMWAEPDRIKRYETFFGPGVNAEVEKISSEERLVAIKLTT---GEKVTEAPAAEAPPAVDTPAE 270
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BLAST of Ec-00_007720.1 vs. uniprot
Match: A0A7S1U5M2_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U5M2_9STRA)

HSP 1 Score: 256 bits (654), Expect = 2.650e-75
Identity = 133/236 (56.36%), Postives = 169/236 (71.61%), Query Frame = 1 
Query:  286 RLALQMQSDGPSQW---AGGGINVSGEAPFEIRGFSLANAAALAGLAITCASFYEYFSTGGAGGLSGIGFVYGIPIALIGLALKYAELPPAPLQTTPEAEALFEEKATETIRSIKSDVTRHRYGDEAHLDTTVKFLGLVMPQSDYPQLQYISQTIEPNGELGFTMVFQSKMTPFKRWVEPERVEKYVAFFGPGVDAEVIKVDAQEKLVAIKLTTLPPGAQPTPKVTAPPAEETVAE 984
            R  ++M   G  Q    A GGIN SGE PFEIRGFSLA +  + G  +T ASF EYF+ GG  GL GIGFVYGIP+ LIGL+LKYAEL P  + +TP+ EA FE KATET++ IK DVTRHRYGD+AHLD+T+K LGL +PQ ++P L+Y+ +     GEL F+MVF+S  TP+K W E +RV++Y  FFGPG++AEV+KV+A+E+LVAIKLTT   G +P     A PA +  AE
Sbjct:   40 RTQVRMSDGGEEQLPQVAAGGINTSGEPPFEIRGFSLATSFLVGGFVLTVASFGEYFAEGGGAGLGGIGFVYGIPVLLIGLSLKYAELAPVEVVSTPQGEAAFEAKATETLKKIKQDVTRHRYGDDAHLDSTLKSLGLQLPQKEFPTLEYLQEETTNEGELAFSMVFRSPETPYKIWAEEDRVKRYETFFGPGLNAEVVKVNAEERLVAIKLTT---GEKPAEPKAAEPAPKEAAE 272
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BLAST of Ec-00_007720.1 vs. uniprot
Match: A0A4D9DHB4_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DHB4_9STRA)

HSP 1 Score: 242 bits (618), Expect = 5.930e-70
Identity = 129/217 (59.45%), Postives = 161/217 (74.19%), Query Frame = 1 
Query:  334 GGINVSG-EAPFEIRGFSLANAAALAGLAITCASFYEYFSTGGAGGLSGIGFVYGIPIALIGLALKYAELPPAPLQTTPEAEALFEEKATETIRSIKSDVTRHRYGDEAHLDTTVKFLGLVMPQSDYPQLQYISQTIEPNGELGFTMVFQSKMTPFKRWVEPERVEKYVAFFGPGVDAEVIKVDAQEKLVAIKLTTLPPGAQPTPKVTAPPAEETVA 981
            GG N+ G + PFE+RGFSLA  A   G  IT  S  EY  + G+ GLSG+GFVYGIPI LIGL+L+YA+L P P+Q+TPEA+ LFE+K+T TI+ IK DVTRHRYGD+AHLDTTV+ LGLVMP  ++PQLQY++Q +E NGEL FTMVF+S  TP++ WVEPER+ +Y  FFGPGV A V KVDA+ +LVAIKL T   G +P     + P  E+ A
Sbjct:   69 GGDNMVGTDVPFELRGFSLATVALGVGALITIGSLAEYLISSGSEGLSGVGFVYGIPILLIGLSLQYAQLNPVPVQSTPEADRLFEQKSTPTIQKIKKDVTRHRYGDDAHLDTTVQALGLVMPNKEFPQLQYLTQGVE-NGELAFTMVFKSDDTPYRLWVEPERISRYETFFGPGVWATVEKVDAERRLVAIKLVT---GERPASAQASRPEGESAA 281
[Close]
BLAST of Ec-00_007720.1 vs. uniprot
Match: A0A7S1ZC13_9STRA (Hypothetical protein n=4 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZC13_9STRA)

HSP 1 Score: 241 bits (615), Expect = 1.280e-69
Identity = 123/198 (62.12%), Postives = 149/198 (75.25%), Query Frame = 1 
Query:  331 GGGINVSGEAPFEIRGFSLANAAALAGLAITCASFYEYFSTGGAGGL--SGIGFVYGIPIALIGLALKYAELPPAPLQTTPEAEALFEEKATETIRSIKSDVTRHRYGDEAHLDTTVKFLGLVMPQSDYPQLQYISQTIEPNGELGFTMVFQSKMTPFKRWVEPERVEKYVAFFGPGVDAEVIKVDAQEKLVAIKLTT 918
            G G+N +GE PFEIRGFSL N   LAG+ +T ASF EY S  G  GL  SG+GFVYGIPI L G ALKYAE+ P P  +TP+ E +FE KAT+ I+ IK DVTRHRYGDEAHLDTTVK LGLV+P  DYPQLQ + + +  +GEL FTMV+QS  TPFK W + +R +KY  FFGPGV AEV+K+DA+++LV I+LTT
Sbjct:   69 GAGVNNAGEPPFEIRGFSLGNLVILAGVVVTFASFAEYLSESGGDGLNVSGLGFVYGIPIFLAGAALKYAEIEPVPCYSTPDGERIFESKATDIIQKIKQDVTRHRYGDEAHLDTTVKKLGLVVPGKDYPQLQELREEMTEDGELAFTMVWQSYDTPFKLWADEKRRKKYETFFGPGVGAEVVKIDAEQRLVGIRLTT 266
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BLAST of Ec-00_007720.1 vs. uniprot
Match: A0A8J9X6Z0_PHATR (Hypothetical protein n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9X6Z0_PHATR)

HSP 1 Score: 239 bits (610), Expect = 1.670e-69
Identity = 129/215 (60.00%), Postives = 153/215 (71.16%), Query Frame = 1 
Query:  331 GGGINVSGEAPFEIRGFSLANAAALAGLAITCASFYEYFSTGGAGGL--SGIGFVYGIPIALIGLALKYAELPPAPLQTTPEAEALFEEKATETIRSIKSDVTRHRYGDEAHLDTTVKFLGLVMPQSDYPQLQYISQTIEPNGELGFTMVFQSKMTPFKRWVEPERVEKYVAFFGPGVDAEVIKVDAQEKLVAIKLTT--LPPGAQPTPKVTAPP 963
            G G+N +GE PFEIRGFSL N    AG+ IT ASF EY S  G  GL  SG+GFVYGIP+ L G ALKYAE+ P P+ TTP AE +F+ KAT+TI  IK DVTRHRYGDEAHLDTTVK LGLV+P   YPQLQ + Q    +GEL FTMV+QS  TP+K W +P RV KY  FFGPGV A+V+K+DA+++LV I+LTT   PP        +APP
Sbjct:   12 GAGVNNAGEPPFEIRGFSLGNLVVGAGILITFASFAEYLSESGGDGLNVSGLGFVYGIPVFLAGAALKYAEINPVPVATTPAAERVFDRKATDTILKIKQDVTRHRYGDEAHLDTTVKKLGLVVPGKAYPQLQELRQDEVNDGELAFTMVWQSVDTPYKMWADPRRVLKYEKFFGPGVYADVVKIDAEQRLVGIRLTTGTRPPVEDQDTSTSAPP 226
[Close]
BLAST of Ec-00_007720.1 vs. uniprot
Match: B7G7J9_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G7J9_PHATC)

HSP 1 Score: 240 bits (612), Expect = 6.220e-69
Identity = 129/215 (60.00%), Postives = 154/215 (71.63%), Query Frame = 1 
Query:  331 GGGINVSGEAPFEIRGFSLANAAALAGLAITCASFYEYFSTGGAGGL--SGIGFVYGIPIALIGLALKYAELPPAPLQTTPEAEALFEEKATETIRSIKSDVTRHRYGDEAHLDTTVKFLGLVMPQSDYPQLQYISQTIEPNGELGFTMVFQSKMTPFKRWVEPERVEKYVAFFGPGVDAEVIKVDAQEKLVAIKLTT--LPPGAQPTPKVTAPP 963
            G G+N +GE PFEIRGFSL N    AG+ IT ASF EY S  G  GL  SG+GFVYGIP+ L G ALKYAE+ P P+ TTP AE +F+ KAT+TI  IK DVTRHRYGDEAHLDTTVK LGLV+P   YPQLQ + Q    +GEL FTMV+QS  TP+K W +P RV KY  FFGPGV A+V+K+DA+++LV I+LTT   PP  +     +APP
Sbjct:   74 GAGVNNAGEPPFEIRGFSLGNLVVGAGILITFASFAEYLSESGGDGLNVSGLGFVYGIPVFLAGAALKYAEINPVPVATTPAAERVFDRKATDTILKIKQDVTRHRYGDEAHLDTTVKKLGLVVPGKAYPQLQELRQDEVNDGELAFTMVWQSVDTPYKMWADPRRVLKYEKFFGPGVYADVVKIDAEQRLVGIRLTTGTRPPVEEQDTSTSAPP 288
[Close]
BLAST of Ec-00_007720.1 vs. uniprot
Match: A0A448ZRR3_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZRR3_9STRA)

HSP 1 Score: 235 bits (599), Expect = 2.420e-68
Identity = 126/211 (59.72%), Postives = 152/211 (72.04%), Query Frame = 1 
Query:  331 GGGINVSGEAPFEIRGFSLANAAALAGLAITCASFYEYFSTGGAGGL--SGIGFVYGIPIALIGLALKYAELPPAPLQTTPEAEALFEEKATETIRSIKSDVTRHRYGDEAHLDTTVKFLGLVMPQSDYPQLQYISQTIEPNGELGFTMVFQSKMTPFKRWVEPERVEKYVAFFGPGVDAEVIKVDAQEKLVAIKLTTLPPGAQPTPKVTA 957
            G G+N +GE PFEIRGFSL N    +G+ IT  SF EY S  GA GL  SG+GFVYGIP+ L G ALKYAE+ P P  ++P AE +F++KATE I  IK DVTRHRYGDEAHLDTTVK LGLV+P  DYPQL  + + +E +GEL FTMV+QS  TP+K W +  RV+KY  FFGPGV AEV+K+DA+++LV IKLTT       TP V A
Sbjct:    4 GAGVNNAGEPPFEIRGFSLGNLVIFSGIMITILSFAEYLSDSGADGLNVSGLGFVYGIPVFLAGAALKYAEIEPVPCISSPAAERIFDDKATEIIAKIKQDVTRHRYGDEAHLDTTVKKLGLVVPGKDYPQLMELREDVE-DGELTFTMVWQSIDTPYKMWADERRVKKYETFFGPGVAAEVVKIDAEQRLVGIKLTT----TSSTPAVAA 209
The following BLAST results are available for this feature:
BLAST of Ec-00_007720.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4M9_ECTSI3.050e-167100.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YHW7_9STRA1.390e-8565.37Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2V4E2_9STRA2.930e-8266.98Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7R9UF83_9STRA8.220e-7959.82Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S1U5M2_9STRA2.650e-7556.36Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A4D9DHB4_9STRA5.930e-7059.45Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S1ZC13_9STRA1.280e-6962.12Hypothetical protein n=4 Tax=Ditylum brightwellii ... [more]
A0A8J9X6Z0_PHATR1.670e-6960.00Hypothetical protein n=1 Tax=Phaeodactylum tricorn... [more]
B7G7J9_PHATC6.220e-6960.00Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A448ZRR3_9STRA2.420e-6859.72Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:12332962..12338957 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score496.5
Seed ortholog evalue8.7e-138
Seed eggNOG ortholog2880.D7G4M9
Length2599
Hectar predicted targeting categorychloroplast
Gene idEc-00_007720.1
EggNOG free text desc.Protein of unknown function (DUF2854)
EggNOG OGs28IHE@1,2QQU9@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_007720Ec-00_007720Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 12332962..12338957 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_007720.1Ec-00_007720.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 12333044..12337346 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_007720.1.1Ec-00_007720.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 12332962..12333262 +
Ec-00_007720.1.2Ec-00_007720.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 12333726..12333953 +
Ec-00_007720.1.3Ec-00_007720.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 12334740..12334814 +
Ec-00_007720.1.4Ec-00_007720.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 12335255..12335386 +
Ec-00_007720.1.5Ec-00_007720.1.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 12336108..12336239 +
Ec-00_007720.1.6Ec-00_007720.1.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 12337227..12338957 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0077205UTR:Ec-00_007720.1Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_00 12332962..12333043 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_007720.1CDS:Ec-00_007720.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 12333044..12333262 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0077203UTR:Ec-00_007720.1Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_00 12337347..12338957 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_007720.1 ID=Ec-00_007720.1|Name=Ec-00_007720.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=302bp
MVRVGHFCVVAAAAADVCTAFVAPVGQAAAGGLVASSSQQQHARVLVSAR
SQSSDTFHHHRAGGRRRQRLALQMQSDGPSQWAGGGINVSGEAPFEIRGF
SLANAAALAGLAITCASFYEYFSTGGAGGLSGIGFVYGIPIALIGLALKY
AELPPAPLQTTPEAEALFEEKATETIRSIKSDVTRHRYGDEAHLDTTVKF
LGLVMPQSDYPQLQYISQTIEPNGELGFTMVFQSKMTPFKRWVEPERVEK
YVAFFGPGVDAEVIKVDAQEKLVAIKLTTLPPGAQPTPKVTAPPAEETVA
E*
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spliced messenger RNA

>Ec-00_007720.1 ID=Ec-00_007720.1|Name=Ec-00_007720.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=2599bp|location=Sequence derived from alignment at chr_00:12332962..12338957+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ACTACTGCTGCGTTGGCTGTTTGTTTTCTCGCAACCTTCGAACACCAACC
ACACGAGGCCGACCATCACGCACTAGACAACGATGGTGAGAGTAGGCCAC
TTCTGCGTGGTGGCTGCGGCCGCGGCTGACGTGTGCACGGCGTTCGTCGC
CCCCGTCGGACAGGCGGCGGCGGGAGGACTGGTCGCATCTTCTTCCCAGC
AACAACACGCACGAGTGTTGGTCTCGGCAAGGAGTCAGTCCTCCGACACG
TTCCACCACCACCGCGCCGGCGGCCGCCGCAGGCAACGGCTTGCCCTACA
GATGCAGTCGGACGGGCCCAGCCAGTGGGCGGGCGGGGGCATCAACGTAT
CCGGCGAGGCGCCCTTCGAGATCCGGGGATTCTCGCTGGCAAACGCCGCT
GCGCTCGCCGGTCTTGCCATCACGTGCGCCTCGTTTTACGAGTACTTTTC
CACGGGCGGTGCGGGCGGCCTTTCCGGCATCGGGTTCGTCTACGGTATCC
CCATCGCGCTCATCGGGCTCGCACTGAAGTACGCCGAACTCCCCCCCGCG
CCACTTCAAACGACACCCGAGGCAGAGGCTTTGTTCGAGGAGAAGGCAAC
TGAGACGATCAGATCTATCAAGAGCGACGTGACCCGCCACCGGTACGGAG
ACGAGGCGCACTTGGACACGACCGTCAAGTTCCTTGGTCTCGTGATGCCG
CAGTCCGACTACCCGCAGCTCCAGTACATCTCTCAGACGATTGAACCAAA
CGGCGAGCTGGGATTCACCATGGTGTTTCAGTCTAAGATGACGCCGTTCA
AGAGGTGGGTGGAGCCGGAGCGCGTCGAGAAGTACGTGGCGTTCTTCGGG
CCTGGGGTGGATGCGGAGGTGATCAAGGTGGACGCTCAGGAGAAGTTGGT
TGCCATCAAGCTCACCACGCTGCCCCCAGGCGCGCAGCCAACCCCGAAGG
TCACGGCACCCCCTGCGGAAGAAACGGTAGCGGAGTAGACTGCAACGCGT
GCGATAAGGTGGAGCAATCGTTTCTCCCAAGTCTCGTTCAAGCGCGATGC
GTAGGTGTTGGGGCCGGGCTGGGTTGGCCCCGACGGGGGGGGAGCTGTCA
GGCCTGTTGTTAGTCCGCCAGGTCGGATTCAGCGGGTTGGACTATGTGGC
CGGGCTTGCGCCGATTGCACGACGTGGCGTTGATGTCACAGCGGGCGGCT
AGATACAGAGAAGCACGGGGCCTGGTCGGGCAGAGAAAATGACAAGCTTC
GCCCCGCTCGGCAAGGGTTGTTGGGAGAATGGAAACATGGGGATGATTAG
TACGAGCACGGCATAGATATGTCGTGTTCCCGATGCGATCCGTAGCTATG
CTCGCCTCATGAGTGTCGATGTTTGTTGGGTTGAGCGCGTCGAGCTTTGG
ACGGACACGATTCAGCAGGCAGCACCCTTCGGCTACTGCTGTGATCGATC
AAACTCGACTGCTGTTGCTGTGGCGAAATAGACGATGGCACTACACCGGC
TCTTTCGCCGCAAATGCAATCAATAGACTGGACGATGCCTGTTGGTTTGT
TGTTCAATGGGGAAACTGTATTGGGGTGTAAACGTTAGAATCGCCCACAC
GCTCGATTGTGTCAAGCGGATGTACGGAGTGTTGCACTCTGTTGCGGGAA
CGGAGGTTGTCCCGTATCTTAAGCTGGAATCGGCCCTGTGTGAGTTGAAA
ATAAATAGGTCACTGCTGTCAGGATGGCAGCACAGGTCATGCTCCGGAGA
GGCTACATACGGCGACTGCCTGTCGCTGATTTGATTTTCTGGGTACCCTA
GGCGGCGTGTGTAAAAACCCGTTTCCACACCCCGGGAGATGGAACGAGGT
TTTTTGGCGAAAGAGAAGAGGGTTTGCATGTTCGGGCTGACTTGGACCGC
TCGGTCTTGTTCCAACCACAGCCAATGATGGCCTCACGTGTAGAGAGGGG
GTTGTTGTGACGTGCTTGCGGTGGTGACATCTTCAGCGGTTCGCATTGGA
GAGAGTCACCGCACAGCCAAGCAAGTTCGGGACGGGGGGGGGGGCGCAAT
ATGGCGAGAGAGCTGTTTATCTGGGGGCTTTGGCCTGGATGATTTGTGCG
CACAACTAGTCTGACGCGGGTGCGAAAGACGACCAGGTCCTGTTTATTGC
TGTTTGCTGTCAAAGAGGTCGTTTTACTCCCGAACAAGGTGTGGTGCGCG
CTGTAAAACTGAAAGTGGTTACAACACCGGCCGTTTTTTATTTAGTAGTG
CTCTTCGTCGAGATCCTCGCGGGGGGTTCACCCGGTGTCCTTAACCCTCC
TACAGCAGTACCCAGTCCCTCCGAAAAAAAAGTCGGCAATATGTTTGTCA
GCCATTGGTCGGGGGGCTACAGTCCCTCCAAAGAATCTGAGCTCCTTGCC
AGACAAAGGGTGACTTGGGTGCAGAATGAAAAGTGTCCCCATGACACGTG
GGGATCGTCACCGCCTTTCACACGATGCAACGAGGTTCGATTTGGCGTGC
GCGTGGGCGGCACAGGTCTTGCACCTTCCTGACGGGACGGGGATGCTTTT
CATTTTTCATTTCGGTAAGACCCTGCGAAGCTCGTCGCACGCGGTAGTA
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protein sequence of Ec-00_007720.1

>Ec-00_007720.1 ID=Ec-00_007720.1|Name=Ec-00_007720.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=302bp
MVRVGHFCVVAAAAADVCTAFVAPVGQAAAGGLVASSSQQQHARVLVSAR
SQSSDTFHHHRAGGRRRQRLALQMQSDGPSQWAGGGINVSGEAPFEIRGF
SLANAAALAGLAITCASFYEYFSTGGAGGLSGIGFVYGIPIALIGLALKY
AELPPAPLQTTPEAEALFEEKATETIRSIKSDVTRHRYGDEAHLDTTVKF
LGLVMPQSDYPQLQYISQTIEPNGELGFTMVFQSKMTPFKRWVEPERVEK
YVAFFGPGVDAEVIKVDAQEKLVAIKLTTLPPGAQPTPKVTAPPAEETVA
E*
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mRNA from alignment at chr_00:12332962..12338957+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_007720.1 ID=Ec-00_007720.1|Name=Ec-00_007720.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=5996bp|location=Sequence derived from alignment at chr_00:12332962..12338957+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ACTACTGCTGCGTTGGCTGTTTGTTTTCTCGCAACCTTCGAACACCAACC
ACACGAGGCCGACCATCACGCACTAGACAACGATGGTGAGAGTAGGCCAC
TTCTGCGTGGTGGCTGCGGCCGCGGCTGACGTGTGCACGGCGTTCGTCGC
CCCCGTCGGACAGGCGGCGGCGGGAGGACTGGTCGCATCTTCTTCCCAGC
AACAACACGCACGAGTGTTGGTCTCGGCAAGGAGTCAGTCCTCCGACACG
TTCCACCACCACCGCGCCGGCGGCCGCCGCAGGCAACGGCTTGCCCTACA
GGTTCGTTGTTGAGGAAGGGTAGAGCGGCCGCGAGGGGGTCATTTGTGCT
GTACACAGTCGAGCAAACCCTGCGGCTACGTGTGATGACGAGGGTCGCGT
CATGTTGCTAGAGGGCAACGTATGCAAGCACATGAACCAGAATTGCTCTT
ATCCGAGTCATGTGCACGTCTACAGCGGCAACCACGGCTGCGCCCACACG
AACAAATCAGCTGAGTGCCGGGCAGTGGGCCGAAAAGTACTGCCACACGC
CTTTTGCACCAATTCAAAGCTCTCCTCGTAGTATGTCCTTCCATGATGAG
GCTGCTGCCATCAAACGTCTGTCGTCCTGCAAATTTTGAGTTTGGCCGCA
CAACATCTGACCAAACCTTTGATGCCAGCACAGAGTCTCAGAGTCTTCAA
ACTTCAAACGCACAACACGTTTTGCTTCTCCTGCACACGCTGCTCCGTGC
TTGCTTCGTCACAGATGCAGTCGGACGGGCCCAGCCAGTGGGCGGGCGGG
GGCATCAACGTATCCGGCGAGGCGCCCTTCGAGATCCGGGGATTCTCGCT
GGCAAACGCCGCTGCGCTCGCCGGTCTTGCCATCACGTGCGCCTCGTTTT
ACGAGTACTTTTCCACGGGCGGTGCGGGCGGCCTTTCCGGCATCGGGTTC
GTCTACGGTATCCCCATCGCGCTCATCGGGCTCGCACTGAAGGTCTGCAT
GTGTGCGGTGTGGTAGATTGGTATTGCAATGTGATAGGTTAAACACCACG
TGTTGCTGACTACTGCTGTACGTATTAATAAAATACTGCTGCAGTACAGC
GGTATCTACTCTACGACAGATCCATGATACTGCTGTACTTCGTATGCACA
CCTCCTCAAGAGACTAGTAGAAACTATACCTGGTAGAACCAAAGGTTGAT
ACCACTGCTGTGATTAACTGCTAACGTATCCTGGACTCATTGTCTCCTTT
GGTACAAAGATTCCTTGGTTGATTTTTTGTAGTCACAATGACGAAGTGCG
GAAGCATCAAACGCGCGACAGCAAGAGATCTGTTTTGTCGCAGCGCAGGT
GCTGGTCTGCGCCTGGCAATCCGTCGGGAGCGTCCATTCAGACTCCGGTT
GCTATGCATAACAATCAATGGAAATCGATTCATTTCACGGGGATACTGAA
TGGCATACAGATATTTACGAAGTCAACATAAAAACGCAGATTGTTGGTGT
TACTACTGTCTTCACGTTGAAAGAAATGATCCAATCTCTTGCTCGGCGCG
TGCTAACGTCCATACTGCTTGTCTATGTGGCGCGGACGCCTTCCAAGGCC
TCGAGCTAAACAAACCTGCTATCAAGTCATGGATCTTTGGCAATAGGCCA
TAACGCTGGCGTGTTCAGACTTCAACGCACAGCAATCTGAACACTGCGAC
AGCCGCAGCCTTTTTTTCGTGTTGCCGCCGACTGACTCCCCCCCCCCCCT
ATCCCCCGGTCGCTCCGCATCCCGGCAGTACGCCGAACTCCCCCCCGCGC
CACTTCAAACGACACCCGAGGCAGAGGCTTTGTTCGAGGAGAAGGCAACT
GAGGTGTGCGTTGCACGTGATTGGGCTACATTTTCTACTTGTAGATTCGT
TTTTTTTGGCCCACAATTGAGAGGGAGAGAGGGAGAGAAGAAAACCACGC
GAACGTCGCTTTTGCTGATGCCCCCGGCAGCACTTCATGCTTTCTAGCTC
CGTCTTTTGTTGCGGGGCAGCATGTCTTCGGCAGGGATACCGAGAAGGTT
TAGATGTGGGGGGGTCGGGGGGGGCGTCCACTGCTGTTGTCGTGGTTACT
GATCAAACCATCCTCGCGGCGGTCATGCTTCAAACTCTGCGGGAAGATCG
CGTGTTCGTTCTCCATCCTTGGTTCTACTCAACACCTGGGCCCAAACATT
TCAACAAAGAAATTACATAAAAAAGACAGTGTGCCCCTGTTGTGTGTGTG
CCCCGAAACTCGACCCGCAATGTAAAAAACCCCATCAAAACAGACGATCA
GATCTATCAAGAGCGACGTGACCCGCCACCGGTACGGAGACGAGGCGCAC
TTGGACACGACCGTCAAGTTCCTTGGTCTCGTGATGCCGCAGTCCGACTA
CCCGCAGCTCCAGTACATCTCTCAGGTACGGCATCACGCACCGCCCCCGT
GTCTTGAAGTTGTCGTGCGTGTGGGTGGAGGGGGGGGTGCACTCCTTCCC
GTCAAAATCGAGGAGGGTGTGAACAGCAGCGCGGTTCTATTGTTGGCGAT
ATCTCGGTCACCGCGGTGCATAAAACTCGGCGCACGTGCCCGTCCCGTCG
TAGAAGTACACGATTGCCTGTTTAATTGGATGGTCTGGAGCGAGAAGATC
AAGCGATACAAGGGAGTGCGGAAAGCAAGCTGCAGATGGCTGTGGCACAA
CATGTCTCGCTTCTCGCCGTTCTGCAAGCGGGTGAACAATACGACCCCGT
TTCTGCCAGTAGTCTCTTGTACCGCGCGCATCTCTGCGGGGCGGTTCATG
GATACAAGGTAGGTGTTGGCCTAAAAAAGGACAGAGGCCTAATAAAGAAG
AGAGGCTTCCCCCGTAACTCTTGTCAAAGTATCGCTACCGATGCTCTGCT
GTTTCCTTTTTTCCAAGGCTACTTGGCTCATTACCATGCGAACGGACTAT
GTGAAGTAGTGCCCCGTGGGCGCACCGCACATTTATACCTTGCACATAAA
CAGTTGCCATTTTTTTTTTCAAATGTCCACTTCTAACGCTGAAGTTGAAG
TCGCCCTGAATCGAGCAACACAGCAGGTTGTGATTGTCGACGCGTTTTTT
CCCACACACTCCGACTGTCTGCTGTTCACCTGGACGGGGTTCCTAGACGA
TTGAACCAAACGGCGAGCTGGGATTCACCATGGTGTTTCAGTCTAAGATG
ACGCCGTTCAAGAGGTGGGTGGAGCCGGAGCGCGTCGAGAAGTACGTGGC
GTTCTTCGGGCCTGGGGTGGATGCGGAGGTGAGGAGGCCGAGGACATCAG
ACTTGCATCGTGATATCTGGGACGGAAGGAGGAGTGCAGAACGTATCGGG
GAAAGAAACTTTGGACGGCATCCAACAAGTCGACCTCGCTGTGTGACAAG
GCGACACGCGCGTGTCTTCAACCACGTTCGATGGCGTGTTGGCAACGTCA
ATTTGTGTGCAATGTAGTTGTTTTTGTGCGTTCCGTGTCGGCGTTTGCCG
TTGGGGAGAACGCGCGCTTGGCGTACTTGGCAGTCTGCTCCTCGAATAGG
CTTTTTTCTTGAGGGCGTCGGTGCGTCGTTCGACATATGGCGAAGTTGAG
GCCGTGGTGCACACGGAAGTGCCAAGCGTGCATCAGTCCTTGGAGACATG
GTTACTACTGTAGCCCAGCTCCGTATTTGCGCTTCTTATTTGTTCCTGTC
CATGTAGTGGCATCCCGAGAGTTTTCTCTCGGGTGAATGGTTACCACATT
TCGGCAAGTTTTTTTGTTTTTTTTTCGCTCTTTGGCGGTGGCGACTGTGG
TCACCCTTGTTAAAGACAGAGTCTCCCTTCCCTTGCTTTCCCGCTTTTGG
GACCACTCTGTAGATTGCGGATGGTACAGGACGCGATTCTGTCTCGAAGG
ATGTCGAATTTTTCGCCGAAGACAAAGCATCATGGTCAACCGCCGTCCCC
CGCCCCCCGAGCTTCCCCTTTGAACCCTATAGACAACAGACAGTTTTTTC
TTTTATTTCCGATAATGAAGGCGGACGCCCACACCATAAAACGTTGCTGC
GCTCACTGCTCCTCGTGCTCATGCTCCGTCCCCCCCCCCCCTTCATGTGA
CTCGCCAAATACCTCACGGCGCTTCGCGCTTGGTGATGTGAGAGGCTGAT
CCGGTGAAAACCCGGCGTGCTCCGACCCGGCTTTGTAGGGATGCGAGGTC
AATGGTCTAACGACTACGGCATGCAAGACTATGAGTACACCCCCCCCCCC
CCCCCTGTCTTGCAGGTGATCAAGGTGGACGCTCAGGAGAAGTTGGTTGC
CATCAAGCTCACCACGCTGCCCCCAGGCGCGCAGCCAACCCCGAAGGTCA
CGGCACCCCCTGCGGAAGAAACGGTAGCGGAGTAGACTGCAACGCGTGCG
ATAAGGTGGAGCAATCGTTTCTCCCAAGTCTCGTTCAAGCGCGATGCGTA
GGTGTTGGGGCCGGGCTGGGTTGGCCCCGACGGGGGGGGAGCTGTCAGGC
CTGTTGTTAGTCCGCCAGGTCGGATTCAGCGGGTTGGACTATGTGGCCGG
GCTTGCGCCGATTGCACGACGTGGCGTTGATGTCACAGCGGGCGGCTAGA
TACAGAGAAGCACGGGGCCTGGTCGGGCAGAGAAAATGACAAGCTTCGCC
CCGCTCGGCAAGGGTTGTTGGGAGAATGGAAACATGGGGATGATTAGTAC
GAGCACGGCATAGATATGTCGTGTTCCCGATGCGATCCGTAGCTATGCTC
GCCTCATGAGTGTCGATGTTTGTTGGGTTGAGCGCGTCGAGCTTTGGACG
GACACGATTCAGCAGGCAGCACCCTTCGGCTACTGCTGTGATCGATCAAA
CTCGACTGCTGTTGCTGTGGCGAAATAGACGATGGCACTACACCGGCTCT
TTCGCCGCAAATGCAATCAATAGACTGGACGATGCCTGTTGGTTTGTTGT
TCAATGGGGAAACTGTATTGGGGTGTAAACGTTAGAATCGCCCACACGCT
CGATTGTGTCAAGCGGATGTACGGAGTGTTGCACTCTGTTGCGGGAACGG
AGGTTGTCCCGTATCTTAAGCTGGAATCGGCCCTGTGTGAGTTGAAAATA
AATAGGTCACTGCTGTCAGGATGGCAGCACAGGTCATGCTCCGGAGAGGC
TACATACGGCGACTGCCTGTCGCTGATTTGATTTTCTGGGTACCCTAGGC
GGCGTGTGTAAAAACCCGTTTCCACACCCCGGGAGATGGAACGAGGTTTT
TTGGCGAAAGAGAAGAGGGTTTGCATGTTCGGGCTGACTTGGACCGCTCG
GTCTTGTTCCAACCACAGCCAATGATGGCCTCACGTGTAGAGAGGGGGTT
GTTGTGACGTGCTTGCGGTGGTGACATCTTCAGCGGTTCGCATTGGAGAG
AGTCACCGCACAGCCAAGCAAGTTCGGGACGGGGGGGGGGGCGCAATATG
GCGAGAGAGCTGTTTATCTGGGGGCTTTGGCCTGGATGATTTGTGCGCAC
AACTAGTCTGACGCGGGTGCGAAAGACGACCAGGTCCTGTTTATTGCTGT
TTGCTGTCAAAGAGGTCGTTTTACTCCCGAACAAGGTGTGGTGCGCGCTG
TAAAACTGAAAGTGGTTACAACACCGGCCGTTTTTTATTTAGTAGTGCTC
TTCGTCGAGATCCTCGCGGGGGGTTCACCCGGTGTCCTTAACCCTCCTAC
AGCAGTACCCAGTCCCTCCGAAAAAAAAGTCGGCAATATGTTTGTCAGCC
ATTGGTCGGGGGGCTACAGTCCCTCCAAAGAATCTGAGCTCCTTGCCAGA
CAAAGGGTGACTTGGGTGCAGAATGAAAAGTGTCCCCATGACACGTGGGG
ATCGTCACCGCCTTTCACACGATGCAACGAGGTTCGATTTGGCGTGCGCG
TGGGCGGCACAGGTCTTGCACCTTCCTGACGGGACGGGGATGCTTTTCAT
TTTTCATTTCGGTAAGACCCTGCGAAGCTCGTCGCACGCGGTAGTA
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Coding sequence (CDS) from alignment at chr_00:12332962..12338957+

>Ec-00_007720.1 ID=Ec-00_007720.1|Name=Ec-00_007720.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=906bp|location=Sequence derived from alignment at chr_00:12332962..12338957+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGTGAGAGTAGGCCACTTCTGCGTGGTGGCTGCGGCCGCGGCTGACGT
GTGCACGGCGTTCGTCGCCCCCGTCGGACAGGCGGCGGCGGGAGGACTGG
TCGCATCTTCTTCCCAGCAACAACACGCACGAGTGTTGGTCTCGGCAAGG
AGTCAGTCCTCCGACACGTTCCACCACCACCGCGCCGGCGGCCGCCGCAG
GCAACGGCTTGCCCTACAGATGCAGTCGGACGGGCCCAGCCAGTGGGCGG
GCGGGGGCATCAACGTATCCGGCGAGGCGCCCTTCGAGATCCGGGGATTC
TCGCTGGCAAACGCCGCTGCGCTCGCCGGTCTTGCCATCACGTGCGCCTC
GTTTTACGAGTACTTTTCCACGGGCGGTGCGGGCGGCCTTTCCGGCATCG
GGTTCGTCTACGGTATCCCCATCGCGCTCATCGGGCTCGCACTGAAGTAC
GCCGAACTCCCCCCCGCGCCACTTCAAACGACACCCGAGGCAGAGGCTTT
GTTCGAGGAGAAGGCAACTGAGACGATCAGATCTATCAAGAGCGACGTGA
CCCGCCACCGGTACGGAGACGAGGCGCACTTGGACACGACCGTCAAGTTC
CTTGGTCTCGTGATGCCGCAGTCCGACTACCCGCAGCTCCAGTACATCTC
TCAGACGATTGAACCAAACGGCGAGCTGGGATTCACCATGGTGTTTCAGT
CTAAGATGACGCCGTTCAAGAGGTGGGTGGAGCCGGAGCGCGTCGAGAAG
TACGTGGCGTTCTTCGGGCCTGGGGTGGATGCGGAGGTGATCAAGGTGGA
CGCTCAGGAGAAGTTGGTTGCCATCAAGCTCACCACGCTGCCCCCAGGCG
CGCAGCCAACCCCGAAGGTCACGGCACCCCCTGCGGAAGAAACGGTAGCG
GAGTAG
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Synonyms
The feature 'Ec-00_007720.1' has the following synonyms
Synonym
Esi0570_0003
Esi_0570_0003