Ec-00_007640.3 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Ec-00_007640.3
Unique Name	Ec-00_007640.3
Type	mRNA
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	223

Homology

The following BLAST results are available for this feature:

BLAST of Ec-00_007640.3 vs. uniprot

BLAST of Ec-00_007640.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0


Match Name	E-value	Identity	Description

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_00	contig	chr_00:12202110..12216777 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Properties


Property Name	Value
Length	2737
Hectar predicted targeting category	other localisation
Gene id	Ec-00_007640.3

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-00_007640	Ec-00_007640	Ectocarpus species7 Ec32 male_plus_femaleSDR	gene	chr_00 12202110..12216777 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_007640.3	Ec-00_007640.3	Ectocarpus species7 Ec32 male_plus_femaleSDR	polypeptide	chr_00 12206321..12215560 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_007640.3.1	Ec-00_007640.3.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 12202110..12202422 +
Ec-00_007640.3.2	Ec-00_007640.3.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 12204165..12204289 +
Ec-00_007640.3.3	Ec-00_007640.3.3	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 12204529..12204644 +
Ec-00_007640.3.4	Ec-00_007640.3.4	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 12206024..12206348 +
Ec-00_007640.3.5	Ec-00_007640.3.5	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 12206628..12206821 +
Ec-00_007640.3.6	Ec-00_007640.3.6	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 12213578..12213830 +
Ec-00_007640.3.7	Ec-00_007640.3.7	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 12215073..12215227 +
Ec-00_007640.3.8	Ec-00_007640.3.8	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 12215522..12216777 +

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_007640	5UTR:Ec-00_007640.3	Ectocarpus species7 Ec32 male_plus_femaleSDR	five_prime_UTR	chr_00 12202110..12202422 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_007640.3	CDS:Ec-00_007640.3	Ectocarpus species7 Ec32 male_plus_femaleSDR	CDS	chr_00 12206321..12206348 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_007640	3UTR:Ec-00_007640.3	Ectocarpus species7 Ec32 male_plus_femaleSDR	three_prime_UTR	chr_00 12215561..12216777 +

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at chr_00:12202110..12216777+
coding sequence from alignment at chr_00:12202110..12216777+

mRNA sequence

>Ec-00_007640.3 ID=Ec-00_007640.3|Name=Ec-00_007640.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=223bp
MAVVVRGARGFCSYHEEERGQACSITDPPCPRLREADSRVCSFHRPWEDT
YNRWVRSGGWHRTSAARAAGDVQEPRPIKYLRSMLAPRHTFGALICTWSC
GIISRPKGTLKWRQLSTTSGRTRDTALRSFFTTADARDGLSCDSTLILRG
GIRSTWLTASTRFIIVNARALSSARQNGRMTLCCGDRTGTGSRRFAGIRC
GRNRPTRSCTVWDRAYRRCPAR*

spliced messenger RNA

>Ec-00_007640.3 ID=Ec-00_007640.3|Name=Ec-00_007640.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=2737bp|location=Sequence derived from alignment at chr_00:12202110..12216777+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
TGGGTCCGTGCTTGGCAGACGTGCCAGCGTCCACGCACCACGCGTGTGAT
ATCCACACATCACCCTGGATGCCAACTCGTTCTCCCGCTACGCCGACGGG
AGTCGTCGGTGCAATCCGACGCGGTTGGCGGGAAAGCATGTCTACAGTAG
TACTGCTGCCGAGGTCAGAACTGCTGTGCCGAGGTCAGAACTGCTGTGAA
CAAGCCGGCCGCCTGATGGTCCAGTGGTCGCCTCAACAAGGACAGCAGGC
GAAGGCACACTGACACAATCGGGAGTGGTCGGGCGCAGTATTCCCGCGGT
ATGTCAACCTAAGCGATCCACACCATTGAGGTCGAGGTGCTTCCTAAGCT
GGCGAGCCGCAAGAAGTTTGATAAGGGAGATATTTCAAGAGAATGGCGCG
ATAGGGTTCACCGGCATCCAGACCGTCTTGAAGGACATGACACTAGGGAC
ATGGTGTGGCGATTCGCCAAGGAGGGCCTTTCTTCTCCGAGTGTCTACTG
TCGAACGGGTGACTCTTGGGACAGGACCGGCTGAACGAGTGCTTCGTCGC
GCAGGACCGTTTTGGCACGCACCCCCAGCTGGTCAGCGTGTCCGCGCCGA
TCGACCGAGAGAAGTTGCCATCTTAGACGAACGTGGCAACTTGTCGGGAG
CCAACAACTGGAAAGGTTTACTTGAAGAGTTAGACAGGCTCCTTGCCGAC
ATCCAGAGAGAGGGTCTATACACACGGCACGAATGTAAGCTATGTTGCCA
GCAGGTAGAAGTCTCGGGACAAGAGTTTCACATCCGGGGTGCAGTCTGCG
ACGGGTTGACGGCGGTCAGGAGCGAGAAATGTGCGACGTACGGATGCAGC
AATGGCCGTTGTGGTACGCGGGGCGCGAGGTTTTTGCTCCTACCACGAGG
AAGAGCGCGGACAGGCCTGCAGCATTACAGATCCACCATGCCCTAGACTG
CGCGAGGCAGACAGCCGGGTTTGCTCGTTCCACAGACCATGGGAAGACAC
GTACAACCGTTGGGTCAGGAGCGGTGGATGGCATCGGACGAGTGCAGCGA
GGGCAGCTGGAGACGTTCAAGAGCCTCGTCCTATCAAGTACTTACGCAGC
ATGCTCGCACCACGACACACCTTCGGAGCTCTCATCTGCACGTGGAGTTG
CGGGATAATATCGAGGCCGAAGGGGACGTTGAAGTGGCGGCAGCTCTCGA
CGACATCTGGCAGGACCCGCGACACCGCCTTACGCTCCTTTTTTACGACC
GCGGATGCAAGAGACGGACTTTCCTGCGACTCCACCCTGATCCTACGTGG
GGGAATACGATCAACCTGGTTGACCGCTTCCACGCGCTTCATCATCGTGA
ACGCGAGAGCGCTGAGTTCTGCTCGCCAGAACGGAAGGATGACCCTTTGC
TGTGGAGACCGAACGGGGACAGGGAGCCGACGTTTCGCTGGAATTCGTTG
CGGGCGGAATCGTCCAACTCGATCTTGCACGGTCTGGGACCGTGCGTATC
GAAGATGTCCAGCACGATGAACAGGTTCGTTCTCGTCGTCAACATGTTCA
CCCACAACGAGCTCCTGCTGCGTGAGAAGTTGCACGGCGAGGAGCCAAAC
TTCAGACTTTGACTTTGGCCTCGGCTTCTTTTTGCACGAAAAAGCTTTTC
AGCTTCAACGCGCGTTGTACATTGTAGCATAGAGCTTCAGGGGATGTTGC
GCATGTCTAACGTTCGATGGCATTGGGAATAACTTCCAAAATATTACACC
GTCGTAGGAGACTTTGGATCTTCGTCGTCCAAAGAGTGTCGCCGAAGTTG
CCTTGCCTTGCAACAACTCCGAATTAAGTGCATGCTGGTGTGCGCAACTC
GGTCGGGCTGAACCGGATAGTATCTATGCACAGAAATATCAGATGGGTTT
TGCGCGGTATGTTGGTGATGTCATCACTGCGCACGAGGGCTGGTGCGAAC
TGTTGTTTGTCCTATTCATGGGGTGCAACGCTCCTTGCCCATCTCACGCC
CGTTAACTTCATATTCATACCTGTCGGCAGGAGAGTAAAGAGTGTGGGTG
TCAAGGGCAAGGCGATTTGCTCCATTTCATTAAGGGTAGAACCCCCAAAA
GCAAACCTAACAGGAACAACGGCAACGGTGGTAAAGCCTAAGGGTGATCG
CGGCACGGTAGATAGACGTAACTATATGGAGGGGCGCTCCATAATATATA
AGGTCGCTGGAAATTTAAACTTTGGTGTTTTCTATTTCTTTTGTACTACC
TGATACCGCACAGAGAGTTCACGTAGAATTGCTTCAACACGCCAGAGTCT
GTGTCGCCTTGCATAGTGGGATCACTGCTGCCTAGGCACGGGATGTTGTC
GTAGCGTTCGTTAACGGCACACGAGTTGCGCCAGGTCGCCACTCCGCATT
TGCAGCTTGGGTGCTTCTGATACGATAAAATAAACAACAGTAGACACCCT
GTTGTAGACTTGATGGAGTAAACCAACGGCAGTAGTAGAATCAGGAACCA
GGAACCATTTACGATATTGCGCTCGGGATGGTAGATATTTTGGCACAGAA
CATATTATCCTGCGACAGAAACGGAGAGTGGATTCCTCTACGCCGGCGAT
CCCAGGTCCTCTTGTTTTAAACGATACACCAAGATTGAACCTCGTCTCGT
TTGAGTTGACGGAACCTACGCATCTCCACCGTCACCTAATCCGATAGGGA
AGAGGCGTGACAAAACGCATCTACTACTGGATGGAGT

protein sequence of Ec-00_007640.3

>Ec-00_007640.3 ID=Ec-00_007640.3|Name=Ec-00_007640.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=223bp
MAVVVRGARGFCSYHEEERGQACSITDPPCPRLREADSRVCSFHRPWEDT
YNRWVRSGGWHRTSAARAAGDVQEPRPIKYLRSMLAPRHTFGALICTWSC
GIISRPKGTLKWRQLSTTSGRTRDTALRSFFTTADARDGLSCDSTLILRG
GIRSTWLTASTRFIIVNARALSSARQNGRMTLCCGDRTGTGSRRFAGIRC
GRNRPTRSCTVWDRAYRRCPAR*

mRNA from alignment at chr_00:12202110..12216777+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>Ec-00_007640.3 ID=Ec-00_007640.3|Name=Ec-00_007640.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=14668bp|location=Sequence derived from alignment at chr_00:12202110..12216777+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
TGGGTCCGTGCTTGGCAGACGTGCCAGCGTCCACGCACCACGCGTGTGAT
ATCCACACATCACCCTGGATGCCAACTCGTTCTCCCGCTACGCCGACGGG
AGTCGTCGGTGCAATCCGACGCGGTTGGCGGGAAAGCATGTCTACAGTAG
TACTGCTGCCGAGGTCAGAACTGCTGTGCCGAGGTCAGAACTGCTGTGAA
CAAGCCGGCCGCCTGATGGTCCAGTGGTCGCCTCAACAAGGACAGCAGGC
GAAGGCACACTGACACAATCGGGAGTGGTCGGGCGCAGTATTCCCGCGGT
ATGTCAACCTAAGGTGAAGGCTGCCTCGTACGGATGTACATTCACGTGCG
CTCACACACTTTTCATCTCGAGCAGTCAGCCACTTTTATTGTCCCACGGT
CTGCTTGGTGCATGCCGTTCGCGCCGCGCTCGCATGCTTGCACGCTTTCG
CACACGTCCGCCTCCAAAATGACGCTGCTGGCAAATGTTTCCGTTCTTCA
TCCCTTGGAACGGTGCTAGTATAAGAGGAATGTACAAATAAATATAGTTA
CAGCAGTGTGGTCGCAGAATATATACCAGACCCCCCGGATCTAAAGCTTG
ACTGCTGTGCTGTATTAGTCCAACCCCGCACTCCACAACGAAGTTGGTGC
CCTAACGAAATGGTCCGTTTAGACAAGCTGTTTCAACCCCGTCTGTAGCG
GCCTCGTCCGTAAGCGTGCTGCAGACTGTAATCGCGTGTTGATAATCGGC
CCGGGGGGTGTTGTAGCTTATGCGACAGACGTACAAACTACTTGTAGACA
ACTTGCGGTGTCATACATGTATGCATGCAATGCATAAGTTTACAATTGAA
ACTGATGTAAGGTCTCCAAGCCGTGGCTGCTGTACTCGCACCCGTTGCAT
CGAATGTACTTTCGACTTGCGTTATTTCCGCGATATTCATAAATTCGGAA
ATAGGTCAAAACGCGAATGAAAGACTGCGATTTGTATTGGTCAATTATTC
GATCGAAGCGAGATTTATGAACACGCCTGAGGTCTCGCCGCAATAATTGC
TGGCAGTTGGAAAAAACACCGCACAATTAAGAGGGAACAGGGATTCCGCA
CTATTATAGCAGTATGCGGGCGGGGGGTATGTATGGCGACGAAAGCGGGA
TGTCGATGGGGGAGGGGGGGGGTGACCGGTAGGTGAAAGGTTACGTTTTC
CCATATAGCGCACAGCAGGTGTAGTATGAAGTGTGTGGTGTTAGCACTCT
GTTTCCGGCCGCGGACGCACACGGCTGACGACAGTTACATCTATCAGCTG
TCGCTCGCTGTTGCGACAGCTAGTCGCTCGTTGTTGCGACAGCTAGTAGA
TCTTTGTAGATGGGGCCTCAGTCTCTGTACTACCTGCGACGCGTTCAAAT
GCATTTCGCACGTAGGGTTGTGTGCACCATACCCGTCGTTTCTACTCTTC
CCTACATGTGTGGCAGCACGGCAGATATGACCAGTTCGTTGCTGTCTGTG
TTCATGTACCATAGCTGCTGATGATTCGGCGTTGCTTTGAACGCCCCTAT
AATCTCGAGCGATGTACCTCGCCTTCCAAATAGTTAATTATGTTTAGCCG
CACGGATTGTTGGACGCCTCTCGAGTCTCCTGCTGCGGTGTGAATCAGAA
AGCGTGTGTGGTACTGCCCCCCGCAGACCAAAAGGCTTGCACTAGCCCCT
CCGCCTCTCTGCTGCGGTGCGTATATTTTAGCTCTTTTGTATGACCACCC
GTTCTTCGTTTCTTGGAATCCCGCCATTATCGGAAATTGTTTTCTATCCA
CGGCCAACCGGCTGTTGAGCAAAGTCGGCATCCTTTGATCAAACGCGGGC
TGCCCGCTGTTTATTGGACACATATCATAACCCTCCAATCGCCAAGTCGT
CCTTTCCATGCCTCTCATGCTTAATCGGCGTTGAGGTACATTGTACATTG
CCCATGTTTCTTGTTCGTGTACTTTGTTGTATTCGCTGTTAGAAGACCCC
ACGCAAAGCGCCCCTTTGGGCCCCCTGTTGTTGTGGTGGCCGAATCTCAC
GACAGCGATCCACACCATTGAGGTCGAGGTGCTTCCTAAGCTGGCGAGCC
GCAAGAAGTTTGATAAGGGAGATATTTCAAGAGAATGGCGCGATAGGGTT
CACCGGCATCCAGACCGTCTTGAAGGACATGTGAGCAACGAGAGTATGCA
TATTTTTTACTGCAGTACCCGCGCTGTTGCCTTGTGCAATTGCGATGGAA
GACAATAGCCTGTTGGGAGTCTGTTCAACTGTCTGTTTGGGGCAAGATCC
GTTTGGGTTATGAAGTAATTGTGTCCTTGGTAAGGAGTGCATATGCTGTC
TTACACAACCGCACGATTCTATTGTTCTTTTTCGGGGGCGCGCTCTGTGT
TGCATGTTGCTAATTCTAGGACACTAGGGACATGGTGTGGCGATTCGCCA
AGGAGGGCCTTTCTTCTCCGAGTGTCTACTGTCGAACGGGTGACTCTTGG
GACAGGACCGGCTGAACGAGTGCTTCGTCGCGCAGGTGACCGAATGGGTG
TTTCCACGTAGTACTTCACTTTCGTGGCAGATTTCCCCTGAACACTACCA
ACCGAGGCCTAACCGCTCCATGGGCAACTTAGATTTCTTCCCTCATACCG
GAGGAGTAAGCCCGCTGCATTGATTATCTCCCGAATTCCGACCAATCGCA
CGTGCCCGCAACGCGACAACACGCACTTTTGTATCAGCATAGAAAAGAGG
GTGCTTATCCCGATCGATAGTTGTTAGGGAATGGAGGCTATTGATGCTTC
TACTGTGTGACCTGGGACCGTGAAGAGACTAGAGGACCAACTGTGGTGTT
GGTAGAACCAGCGAGAAGTAGTTAGAGAATGCCTCAGCATCTACAGTACA
ATGAAAGTGATGATCAGGTTTTTTACTACCCTCTCAGCTACCCCGCCCAT
TCTGCCGGAAAAGTGGTAAACACGTTGAAATCCCCCCCCGGTGTTCTTCA
TCCGCAAAAATGAGCAACCTCTCCACTACCCTCGGGGTCGTCGTTGGGTT
AGTCAAGGATATCCCAGCCCCCCGGGACGAACGAAAATTTAACGGGTACA
CCTCGGGAAAATTCCCGCCGTTTTTTTACCCGCCGTGGTGGACGGTCATC
CCCGCACTGGCGGTAATTGCCGCCACATTCGGTGGTACCGGGAACCACCG
AAGGCGTTACCGCCGAAAAACGAAATACCGCCTACCGCCTAAAAAGTACC
GCCATATTGCAGTACCGCCGAAGAAGTACCGCCAAAAAACGAAGTACCGC
GAACCGCCTAAGAACAACCGCCATATTGCAGTACCGCCGAAAAAGTACCG
CCGTACTGCAGTACAGTCTCCTCTTTGTCAGTTGCTCGATGGGGTGTGCT
ATTGTCTTGAGATGGTGAAACCGCACAGAACCACAGCTGAACCGAGATAC
CTACACCTGAAGGTGATCCTTCGCCTCCGCTGTTAGCCTACATGAACATT
ATTTGTCGCACACAGCCGCCCCTCACTGGGGTGTGTCTTCCTCACCCCCC
ATCGTCGATGCCGCATGTTTTTACCGCCGGCGGCAAAGACAACCTGGTGC
AAAACAAATTTCGAAGTACATTCTTTATCTAGGGGATGAACGCGTGATGC
CGACATTTTGTTCAGGGGCCTGACCCGACCATGCACTAAGCAGGTGTTAA
CGCGGAATTTGTTACGGTAGCTCGTGGATAACACTTATATTAAACGTGGG
TGGAACGGGGTCCGGTGTAGTCGACCATACCATAACACACCTACCTTCGG
GCAGACGCGGCTGGCTGTGCAGAGCACGCCCTGTCTCTAAACAGATGATC
GACAATCAATCTCATGTGTTAGACAACCAACCTACACGTTCGCGCGGCGT
CCACATCGTATCAGGACCGTTTTGGCACGCACCCCCAGCTGGTCAGCGTG
TCCGCGCCGATCGACCGAGAGAAGTTGCCATCTTAGACGAACGTGGCAAC
TTGTCGGGAGCCAACAACTGGAAAGGTTTACTTGAAGAGTTAGACAGGCT
CCTTGCCGACATCCAGAGAGAGGGTCTATACACACGGCACGAATGTAAGC
TATGTTGCCAGCAGGTAGAAGTCTCGGGACAAGAGTTTCACATCCGGGGT
GCAGTCTGCGACGGGTTGACGGCGGTCAGGAGCGAGAAATGTGCGACGTA
CGGATGCAGCAATGGCCGTTGTGGTACGCGGGGCGCGAGGTAAGCGACGT
ATGTCAGTACTGAGTGACCCAGACAGGGCGCGTAAATCTGAAAGTACTGT
TCGAAGATGACGGCGCCCAGACCAGAGCAGGGCATCATAACCATCTCATG
TCCAGTGGTTAGTGATGATTGGGGCGGCAGTACATTAGGTCGAACGAACG
CCGAATACCCACACAAGCACTGAACAATGACGTCAAGACTAAATTTGTCG
CCGGATCATCGGGAAATACAGAAAATATGAGGTGCTCAACGATATGTTGG
TAACGGCGGCTCTGGCAGGTTTTTGCTCCTACCACGAGGAAGAGCGCGGA
CAGGCCTGCAGCATTACAGATCCACCATGCCCTAGACTGCGCGAGGCAGA
CAGCCGGGTTTGCTCGTTCCACAGACCATGGGAAGACACGTACAACCGTT
GGGTCAGGAGCGGTGGATGGCATCGGACGAGTGCAGCGAGGGCAGCTGGA
GACGTTCAAGAGGTGGGATAACTTAAGTACAGTTGGACAGACCTATCAGC
GTGTATGGTACAAAATATGAATGAAGCCGGGAAGGGTAAAAGATACAGCA
CCTGTCGCTACAAAGATCCTGGGGGGATAGCTGTAGTTGTCTTCAGACGT
GTGCGTCCACGTGACAAGTGCGTGTGATTGCGAGGGACACCAGAGTTTTT
TTATATATATATATATTTTAGTTCACTTTTGTCGTGCGCCAGTCTGCCGC
CAGCTGCTGTGGTGTTTTCTGCTGGTGCCTCGCAGCGTGCCTATATCGTT
TACTTTTACGCTTTTCTGGTGTCGGCGGCTGTCCTCGCTGTCGCCCAGCA
ACGGCTATCTGCCGATTCGCCCGCAGCCTGTGTGTGTGAGAACCAATTAG
TTTTTCCCCTCAAACACCAACCCCGTCCAGCGCAGAGGTTCCACGAAGAA
GTCAAAAGGCATATATACAGTTAACGCCCGCAATGAAGATTTTGTTTTTT
AGAAATATAGGCTCACTTTTCCAGGAAAAAAAAGAAAATACTGTTAAGAA
ATATGGCTAAGTCTGGGTCACACACGAATAAATTTCTCAACAAGAAACAG
CGGCGACCGCTGCCCTACTACGTAAGAAACGAGGGGTTACGGGAATGTGT
CGAATAGGAAACATCCCACAGCTCCTCCTATCTCTCGCTCTTTCCCCCGT
CTCCCACTACCCCCCCCCCCAGTGCATGTATATTTGTACGACAAGGGGGG
AGTGTGTTTTTTTTCCGGCGCCCCCTACGGCCCCTTGCCGGCTCTGGCGC
CTTCTGGGTCTCCGGCTCTGGCCCGGCACACCAGACAGGCTGCGAACCAA
TATATGCTGTCTGCTGTACGGTTTTGATGGTGCTCTCCGCCAACTCTCGT
GAGCAGAGAAAATAAGAAATTGCCGACTTGAGAAATTCAGCAGGATTTGG
CGGCACGATAAAATAAGAAACCTTACATAAGAAATTGGACGACATACAAT
ACGCTGAGTTTGTAGCCCACAAGAAGAATTTGAGGCTGGACCTGAAATAA
GCGTTTCTTTGTTGCGGGTGCTAACCGTAGACTATAGCTGGCATCCCTCC
GGAGTGGGGTAAAGAGAGCACCGCGGCAGGGGGTGATGCAAGAATTAATA
TGGAAAGAGCAAACACAGATATTTCTTTGTAGAGTACGCACTGTTCGTTC
GTCCCACACTCACTCTGCATTTACTATGTCATTTTTTTCCCTGATGCTGC
GTATCAACCAGCGGCGGATTCCAGGCCGCCAAATGACTTGAAACTCATGA
GAGCCGTATTGTCGCCCAGGAAACCCACACACACACCCTCGCCACAGGCG
GGCGGAGAAGAAGCGTTGTATTCGCGCGTTTAGCATGCAAACAGTCTGGT
TATAGGGCAGTGGCCGTTACCATCATGGTGTGTGCCGCACAACTTACATT
CCGGAGAGAATAAGAGGCCACACGTGCCGAATAAATTGGATGGATGGATG
GGTGGATGTGGAAAGGTGGGGCAAATCGAATGAATCTATAGACAAGAACA
GCGCGCGTGTTGTGTATTTATCAAATATTCGTAGAAAAATGGATACACGT
AGTAAGCACACACAGCCACACCATCACGAACTCCTGAGTACAAATACACT
CATCATGTACGTAGGAGTCAAACAGACAGACTAACGGAAACAAACACGAA
CTCACGTACGCAGTGACCTGGGCGCAGAACATTATTTTTCTCGTCACTAT
TAGTTCTACTACATGTACGTTCGTTCATACAACGTCGTTCTTTGTCCGGT
CCTACTTTCCGACTTTCTTTGTGCAACATTGGGCTGCTGCGGGTCGTGGG
TACGTGATAGCGATGTACCACAGCGTTTTCTTTTGTCTGACTCACGAAGG
GTGAGAGCCAGGCTATGGGTGAAACAACGAGCAGCGAAGACCCGAGCAGC
AGAATTAAACAGCAGCAGCAGCAGCACAGCAGTACAAACTGGAGTCGACG
ACAGCAGCAGTAGAAAATATAAAAGTCTAACAAACAGGCGGCGGGTGTTG
TTCTGAGATGAAGAGAGGACAAGCAAATGGGACCGACCGACACACAGCCA
ACCTCGCACCATCAATCAGTCGCGCTCTGAGCCGCAACACCGTCCCGCCT
TTTTAATTGATGCAGTACTTGTTGAGCCTACCCGCTTTACTAAGCGGTTT
AGACCTTTCTAGCTGGCGGGCGTGTTTGTTGTTCCTCCAGCAGCGTGCAG
CAAGCGCAGGCACGGAGTCCAGACGTGTGCTTATTATTATTTTTTTTATA
TTCCACAACGAATCCATCTCTATCATAGAAAAGAGTCAGAGGCAGATTAG
CAATTAATTCATAGCGTCAGAACAAGCTACCTGTATGTCTACGATTTCCC
AGACAGCATATAGGGACATCTACCCTGCGGGTAACAGGCTCAACAAAAAA
ACAGTTTGGTAGCTGTCTTGTGTGTCTCATCTATGTTATTTTGTTGGGAA
CGTGCAGCAGAAATGTGTTGGGTACTGTTGGGTAGTCGGGCGTTTTGTGT
GTGGCACCCTTGTCGTAGGGCATGCAATCTCCCTCAGTTTTGTATTCGGA
TTATTACGGACCGCCGTGCGAGGTGTACTTCATTGTTGTACCCGCTACAG
CTGTGCTAGAAAGAGAGAAAATAATGTTACAGCTGCTTCAAAGAAAATGT
AAGACTCTCCAAGTCGAACAGCCGCCTGCAAACAGAAGGGAAAATACCAC
CCGAACAGCCTCCGCTTCTAAAACGAACGACCAGCCAACACAAATGTATA
ACTGTTCATCTATGAGGTTCCTTGATCATGGTCGCGACGTAGATATAGTC
TAAACTTCCGATGCGCGCATCCAACACTGGTGGTAGCATGGCACACGTCA
CAACACGAACACCTACTACCACCACCACACATGACACCGCCAGAGACAAC
GACTGGTGGCGTGGGCTACGCTATTCTCGGACACGGCGACTATCCGTTTG
ACAAGTTGTTTGTGTTCGTTCAACATGGACGGGCGGGTGAAGTTTCGTTG
TTGACACGGTCTGCAAGGAGTTTAGTTACAGACGAGTCTCGCGCTCCCAA
AGGCTCACCCATATCTCTCGGCGCCTGTACACCCAAGACTCGGGACGCCC
AGAGACAACCTCTTCCTGTAACCAGTGTTCTCATGATCTGATACCAAACT
CGTCAGCCGTTGTGTCATAGTGCCTTCGTCCCAAGACTAAGACTGTCATC
AGACTGTTGATGTTATTTTTTGGATTTTTGGGATGCGAAGACCCGTGGGC
CGGATGCATGCTGCATTTAATGTGACCTTATCACTCACCAACTACTGCTG
TGTACATGTCCCTACCAAACTTCACCGTCTGCACGGTCTATGCTTTGCTC
TCAACCTCTCTCTGCTGACATTGGCACGATATGGCTTGACTGCTAGAAAG
TACATCGGCGGAAGCTCTGGTTCGCAGCTGTAGATGTACAAAAGTCCACG
TGCGAAGAAATAGAATGCTTGATTGTCCTATTCGTTCAATTGCCATGAGC
TCACAGCAGCTAGCTACACAGATGTTGTCGCTCGCTGTGCACGCGCGTTG
TACGTGTGTCGCAGTGCCCGCTGAGCGTGTGTTGTCTTCTGTGCGCGTGT
GCCTGTGCGTGTTCTCAGCAGCTGCAAGATGCTGTGTGCGGTCTGCTGAC
CCCCCTTCCAAACCCTCTAATAATGTAAAACCTAGCATTTATTAGCGGAC
ACACGTGCAACCTTGTTTTTTTATGGAGCGCTCCTACTGTACACAATATA
CATCCTTCGGATTTGTTTTTGGGGTCAGACAAAATGATCAGACAAAAATT
GGGTCAGAAATTTTAGAGCGCACACGGTTGTATTTGTCTGTGACGCTGCC
CCAGTTTTCACCCACGGCTCAGACAAATACCTCTGACCGGTATCATTTTA
TCTTAGGCGTGGGTTCCTGTTCAGAACGCTCAGATATTTGATATTTATTT
GATGTACAACAGAGTAGAGCAAAAACAACAACAGATGATGGCATCGCAAG
GTATAGCACAGACTCGTCCAAGCCTAATGACACCACGACTGGACAAACAG
ACCTGCTCCTCCTCCGATGCGGGCGGTGTGCGTCTATGTGTGTGTAGATA
TGTGGTAAACGCTGGGGAAGGAACCGAGGGGATGAGAGGGTGGGGTGAGA
CAAAAGGTTCACCAGCAGCCTCCAAAAGAAGAGCAACTTTATTGCCCAGC
CCAAGTTCAGGAGAACACCCATACCATGATGAGCTGTAGGCCACTCGAAC
TGCTGTGAGGTGGCCCAAAAGTTGCTCTGTGTTACGCTCTATCGGCGCCA
TCTCCTCTACACAGCTGTTGCGGTTTGGAAAGCAGCTAAAAAAATCGCTG
TGTGAGGGGTGATTTATTGTTCTAGGTTGAAGCCTACGTTGCTTCTGCTT
GCTGCTGCTGCAGCTAGCTAGCTAGCTGGTTGCTGACCGCCGCCCCTTTT
CTCGGTTGGTTGAAGCAGGACGCCACCTGAGCGGCTGAGACTTGACAGGG
TGCTTCTCTGCGATAACAACACCCCCGCTAGATGCTTCTGGCACCTTGGG
TGATAGATGGCGCAGCACCCAACGAAGCAAACCTTTTTTCTTGCAAGCCT
TTTCGGATCTTTATGATGCCAATTTTTATCTGGGCAATTTTGTCTGGCAT
CACTGGTATAAACCGTCAGTGTACATGTATGTATAGACTTAAAAATACTC
TAAATAAGTCCAGTACCCAGCCGGTTTCCCTCAACTCACTGGAAAGACTC
CACCACTCCCCGTTCGACTGTGGCTATATCTCCAATGGGTCGTCTTTCTC
TGTGTGTTTTTTATATTCCTTAGGCTGAGTCTTACGGTGTGATTATTTCC
GGCTAGGATTTGGGGGGGGGGTCCTTTTCTGAGCAAAAAAAAAAAATGGG
CGTCTTACGGGTAGGAAAATAGCATTTTACAGCCCAAAATCCAACTGGGC
AGTTTCCAATAGCGATTCCGGCCGGCCTGTTAGAAAATTGGTTCCAACAG
CGATCCTGTTGGAAAATCGCTGTTAGAAATGGGGGGGGGTACCCCCTGGT
CACTGTTGATCGTGCCAGAACGAGGAACTACACCGTCTGCTGGCCAAACA
GAGGCCAGTGTCATGAGGTAATGCACAAACCCTCTGCAGGTATCTAAAAA
TCAGGGCGTTCTGCGTCGTGTTGGCCGCACACCAGCCGAAAACGTTAACA
ACCCTGCCACATGCTTCTGCTGACGTTCTTGCCTTTGGGCCGAAAAGAGC
CGTTTTTGCGCTAGTAGCGGCGTGTGGTCATACACATACCCTCTGCTCGC
GTCCCAGAAACAGAGCGTATTGTCCAGTTTTGATTGCACACGGCCTGCAA
ACAAACGTGAATCGAGATGTTGTTCGGTGTTGCCTTTTTTGCACGTAGCC
TTTTTTTTCTGCCGCTTGCTCCGAGTCGAGTGTGATCATCAGTGTACAAC
GCATGCCATCAGAGAGAGGCCTTTGGCCGACGACATCCACAAACTGCAGC
CACTGGCGTGCGATTATACACATGCCCTCTGCGGGTGACCCATAAATAGG
GCGCTCGGTGTCTTCTTGGTCGCACACGAGCCAAAACCGTGTAGCATGTT
GTGACTCACAAGAACATGAATCAGCCTCTTTTTTCCATTCAGAAAAATAT
ATACCTCGAGGAACCGTATTAAGACGGTCGTTTGGATCTGGATAATTTTT
TCGGTGCAGGCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNGGGTCCCTTTTTTTCCCAGACCCC
TTTTTTTTTCCCCCCCTGCCCCCGGGGGGGGGGTTTCCCCGGGTCCCACC
CCCCCCCCTCAAGGGGGGGCTTTTGGGGGGGGAATTCCCAAAAAGGGGGC
CAGGGGGGGGGGGTTAAACACCCCCCCTTGGGGGGGGCCCCAAAAAAGGG
GGGGCGGGGTTTTTTTTGGTGCCCCCCGGCCCAAACCCGTGTGGCCTTTT
TGGTCTCCAAAAAAAAAAAAACCCCCTTTTTTTTCCTTTTAAAAAAAAAT
TTCCCCGGGGGCCCCTTTTAAGGGGGGTTTTTGGGTTTGGATAAATTTTT
TGGGGGGGGGGCCCCCCCCCCCCCCCCCCCCCCCCCCCCGAGAGAAACAA
AAATTCCCTGAAATAATCACACCGTAAGACTCAGCCTTAATTTTGTCCGG
GAAATTTTGTCTGGGCATTTTGTCTGGGCATTTTGTCTGGGCATTTTGTC
TGGGCAAAAGGAAATATATTTCCGAAACGCACCAAACTAAAACGCCCGAG
ACCCTACCTTGCAGCCGGTGTATTTTAGAAATCTCGGTAACGTAGAATAC
CCCAAAGTGTCTCGACCGGCGTCAGTGTAGCGATGTAGGCAAGAGTGATT
GCGTGAGAAAATACGACGCAAGCAGTGTTACAACAGTCCAGCACGACCGT
ATGTATGTAGTAAGGCCTCGTGAATGCCAGCTACACCTTCTCGTTTGGTT
TCATTATTCCAGCTATACGCCCAAGGGACTTTGTGTCGGCCTTGGTGCGT
TGTCGGAACCTATGTACCTGTAAGCACGGTTTCGCATGAAAGATAGATGC
CTTCAACGTCAAGACGCTTTTTGACTAACAACACATGAACCGATTGCTCT
TCTATTAACCCCACGCAGCCTCGTCCTATCAAGTACTTACGCAGCATGCT
CGCACCACGACACACCTTCGGAGCTCTCATCTGCACGTGGAGTTGCGGGA
TAATATCGAGGCCGAAGGGGACGTTGAAGTGGCGGCAGCTCTCGACGACA
TCTGGCAGGACCCGCGACACCGCCTTACGCTCCTTTTTTACGACCGCGGA
TGCAAGAGACGGACTTTCCTGCGACTCCACCCTGATCCTACGTGGGGGAA
TACGATCAACCTGGTTGACCGGTAAGAGCCGCGTTTGTTTGTTGAAATAC
GCCAGACTCGCCATTCATTTTGCCTTATTGACAAAGTACCTTTCTTTATA
GAGATCGCACTCGGAACACGTTTTGACACCCCTTCTTACGACGATGGGTA
CGGCAATATGGGAACGTTCCTCAAGGCGGGGGGACGTCCTGACCCTAAAT
CTGGAAAGCGGATTTGAGGTGTTTTACGGTCGAGGCATGGCTCCGCTTGT
TCCATCATGTACTTTAGCTTCCGGTATGCGATATAGAATAGGTGATCAGA
GTCGGAGAAGCGAAGACCCCCCACCACAACAGCAGTAACCATGAGAATTG
CCTGATGGACTCCATCGCTGCGAAGGAAAGGTTGCTCTGCGTGTTCGAAT
TGAGGTGGTGGTGGTTACCTCTCTGCATTCCACTCAATCAAGCAAGCGTC
CGTGTGTTAAATGCTTTATCGTTGTTGATGGTGGGTGACACAATAAACCA
TAAGCGGGAAATGGGAACTTCTAAGCCAGTTTTAGACACGAACGCACGGG
ATATGAGCAGCGCGCCATTTTCATTCGCTCAGTGCTAAGGTCATGGCGGG
TGTGCTTCCCCTATTGTTGGTTTCTGCGTATATTATGCTCTCTATCTCGA
TCTCGATGTCGTTATCTCGCTCTTTCGCTCTCTCTCCGATCTCGTTGAAC
AAAGTTGTCTCTCGTCATCATACCTTTATAAATACGGGGTGAGTATCCTC
AGCACCCTGGTGACTGAACTGGTGCAGAATGGCAGCCAATAGCTCTCATT
TAGTACGCACCCATTTCACTAGCCCCAAGCAGACAACCACTGAATGCTCA
GTATGCCATATATCGTAACCGTTGTCATTCACAGCTGCCGACATGTTGAG
TGTAAAAGGGTCCATACCGATGCGGCACCCCGAGGACGAGGGCCTGTCTG
TCGTTGTGTGATTGCTGCAACGGTATTTATTTTTCCCTTTTTCCGACTAC
ACACAGCAGCCTAGAGTGGTCGACCTCGTCGTCGCATACGGAAACTTCCT
TGGATAATTGGATACAGGTGAGGGTGTCTTCCAATAAGCGACGTGTAACA
AGCGCAGTCGCGTCAAATATACACACTAAGGTGGACATCAAATCTGAACT
TTGACAAACGTATTCCTGCGCCAAGAGTGCGACGTGTTACCACCCTACTA
AGTACGTGCCTATTTTGCTGCCGCAACGTCTGCTCTGTGCCCGCCGGCTA
TTCGTGCAACAAGCTTCCACGCGCTTCATCATCGTGAACGCGAGAGCGCT
GAGTTCTGCTCGCCAGAACGGAAGGATGACCCTTTGCTGTGGAGACCGAA
CGGGGACAGGGAGCCGACGTTTCGCTGGAATTCGTTGCGGGCGGAATCGT
CCAACTCGATCTTGCACGGTAAATGGATCGGATGTGAATATGGGATTATT
CGTGTGAGGTAGGTAGACCCGGAACCCATGTCTTCAAACTCTGTGCCGAA
ACTTACTGACCTAACCAAGTCCGAGTAATTTTTAACTTTGACCTTCGGTA
GTATTCGTGTACTCGTGCACGGTGAACGAACGTAATGCGTATCTGTGGGG
AATACGTTGTTGTTGGTAATTAGTCACAACTTGACAGATCGTCACTTGCA
ACCCAGCGTCATGTAAATGCCTCCCTATTGACAGTGATACTGATACTTGC
TCCCGTCTATAGGTCTGGGACCGTGCGTATCGAAGATGTCCAGCACGATG
AACAGGTTCGTTCTCGTCGTCAACATGTTCACCCACAACGAGCTCCTGCT
GCGTGAGAAGTTGCACGGCGAGGAGCCAAACTTCAGACTTTGACTTTGGC
CTCGGCTTCTTTTTGCACGAAAAAGCTTTTCAGCTTCAACGCGCGTTGTA
CATTGTAGCATAGAGCTTCAGGGGATGTTGCGCATGTCTAACGTTCGATG
GCATTGGGAATAACTTCCAAAATATTACACCGTCGTAGGAGACTTTGGAT
CTTCGTCGTCCAAAGAGTGTCGCCGAAGTTGCCTTGCCTTGCAACAACTC
CGAATTAAGTGCATGCTGGTGTGCGCAACTCGGTCGGGCTGAACCGGATA
GTATCTATGCACAGAAATATCAGATGGGTTTTGCGCGGTATGTTGGTGAT
GTCATCACTGCGCACGAGGGCTGGTGCGAACTGTTGTTTGTCCTATTCAT
GGGGTGCAACGCTCCTTGCCCATCTCACGCCCGTTAACTTCATATTCATA
CCTGTCGGCAGGAGAGTAAAGAGTGTGGGTGTCAAGGGCAAGGCGATTTG
CTCCATTTCATTAAGGGTAGAACCCCCAAAAGCAAACCTAACAGGAACAA
CGGCAACGGTGGTAAAGCCTAAGGGTGATCGCGGCACGGTAGATAGACGT
AACTATATGGAGGGGCGCTCCATAATATATAAGGTCGCTGGAAATTTAAA
CTTTGGTGTTTTCTATTTCTTTTGTACTACCTGATACCGCACAGAGAGTT
CACGTAGAATTGCTTCAACACGCCAGAGTCTGTGTCGCCTTGCATAGTGG
GATCACTGCTGCCTAGGCACGGGATGTTGTCGTAGCGTTCGTTAACGGCA
CACGAGTTGCGCCAGGTCGCCACTCCGCATTTGCAGCTTGGGTGCTTCTG
ATACGATAAAATAAACAACAGTAGACACCCTGTTGTAGACTTGATGGAGT
AAACCAACGGCAGTAGTAGAATCAGGAACCAGGAACCATTTACGATATTG
CGCTCGGGATGGTAGATATTTTGGCACAGAACATATTATCCTGCGACAGA
AACGGAGAGTGGATTCCTCTACGCCGGCGATCCCAGGTCCTCTTGTTTTA
AACGATACACCAAGATTGAACCTCGTCTCGTTTGAGTTGACGGAACCTAC
GCATCTCCACCGTCACCTAATCCGATAGGGAAGAGGCGTGACAAAACGCA
TCTACTACTGGATGGAGT

Coding sequence (CDS) from alignment at chr_00:12202110..12216777+

>Ec-00_007640.3 ID=Ec-00_007640.3|Name=Ec-00_007640.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=669bp|location=Sequence derived from alignment at chr_00:12202110..12216777+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGCCGTTGTGGTACGCGGGGCGCGAGGTTTTTGCTCCTACCACGAGGA
AGAGCGCGGACAGGCCTGCAGCATTACAGATCCACCATGCCCTAGACTGC
GCGAGGCAGACAGCCGGGTTTGCTCGTTCCACAGACCATGGGAAGACACG
TACAACCGTTGGGTCAGGAGCGGTGGATGGCATCGGACGAGTGCAGCGAG
GGCAGCTGGAGACGTTCAAGAGCCTCGTCCTATCAAGTACTTACGCAGCA
TGCTCGCACCACGACACACCTTCGGAGCTCTCATCTGCACGTGGAGTTGC
GGGATAATATCGAGGCCGAAGGGGACGTTGAAGTGGCGGCAGCTCTCGAC
GACATCTGGCAGGACCCGCGACACCGCCTTACGCTCCTTTTTTACGACCG
CGGATGCAAGAGACGGACTTTCCTGCGACTCCACCCTGATCCTACGTGGG
GGAATACGATCAACCTGGTTGACCGCTTCCACGCGCTTCATCATCGTGAA
CGCGAGAGCGCTGAGTTCTGCTCGCCAGAACGGAAGGATGACCCTTTGCT
GTGGAGACCGAACGGGGACAGGGAGCCGACGTTTCGCTGGAATTCGTTGC
GGGCGGAATCGTCCAACTCGATCTTGCACGGTCTGGGACCGTGCGTATCG
AAGATGTCCAGCACGATGA

Synonyms

The feature 'Ec-00_007640.3' has the following synonyms


Synonym
Esi565_0015
Esi_565_0015