Ec-00_007170.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Ec-00_007170.1
Unique Name	Ec-00_007170.1
Type	mRNA
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	169

Homology

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BLAST of Ec-00_007170.1 vs. uniprot
Match: A0A6H5L244_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L244_9PHAE)

HSP 1 Score: 280 bits (717), Expect = 9.830e-83
Identity = 137/165 (83.03%), Postives = 143/165 (86.67%), Query Frame = 2

Query:  179 MRWRCFPGLLILAASQEFDVGNRGEQESTAATFLELALERFEARNGRPATFEENNFAFDGLQLIRVPKAGSSEASVIARRLGGCVPRGPCCAFPGDPPGSCPLEGLMCPMVTGCVGHNMNQRRTMMLEDPSVFSMTNIRGVVNRMVSGFLYTKSHSPPCARTDNV 673
            MRW CFPGLL++AASQ FD G   EQESTA+TFLELA ERFEARNGRPATFEEN FAFDGLQLIRVPKAGSSEASVIARRLGGCVPRGPCC FPGDPPGSCPLEGLMCPMVTGC  H M+   T MLEDPSVFSM NIRGVV+RMVSGF YT  HSPPCA  D+V
Sbjct:    1 MRWCCFPGLLVIAASQAFDAG---EQESTASTFLELARERFEARNGRPATFEENAFAFDGLQLIRVPKAGSSEASVIARRLGGCVPRGPCCRFPGDPPGSCPLEGLMCPMVTGCTSHRMDPTTTAMLEDPSVFSMANIRGVVDRMVSGFFYTDPHSPPCAWKDDV 162

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BLAST of Ec-00_007170.1 vs. uniprot
Match: A0A6H5JXN8_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXN8_9PHAE)

HSP 1 Score: 274 bits (700), Expect = 4.850e-79
Identity = 156/307 (50.81%), Postives = 193/307 (62.87%), Query Frame = -2

Query:  961 AGMLFADDFVGMSYTPR--DFNYRLTRRRIGKWRLSANVKKSAVNVCNKNREKTVE*RWKWGIKELAVVGQYIP-EYSLEKTARGMRTCPRVSNNGKT--GKVPPVLANRYLDTRIE*TVLKSVIVPPLGYTGEVLEENLQVVQELEEAQVDPTKSILGCSKRTRYPAVRAALRVRSLRSGKDGSKLTWQYGMCGVGCERLSRTAWEEKWVNKERG------MSTIHAVGQGC------R*RMEGV*N*RR*HAGNGKPGGFKKNTSVVCAEGEEYYVRNETNIDEGLEM*ALK---IGFKEYLHGP 1821
            +GMLFADDFVGMSYTP      +   ++   KWRLSANV+KSAV VCN+N+E+ VE RWKWGI+E+AVV QY      + K         +V+  GK   GK+ P+LANR+LDTRI+ TVLKSVIVPPL Y GEV E N +VV+ELE AQ+   K+ILGCS+RT   AVRA L ++SLRSG+D  KLTWQY MCG+G ERL R  WE KW NK+RG      +  +  V +G           EG+              GFK+  SV CAE EE  +R E+   EGLE+  +    IGFK+YLHGP
Sbjct:   64 SGMLFADDFVGMSYTPEGLQMQFDAAKKFTDKWRLSANVQKSAVMVCNENKEEPVEHRWKWGIEEIAVVDQYTYLGVEIAKDCSWNAHMSKVAEKGKARAGKLHPILANRHLDTRIKLTVLKSVIVPPLEYAGEVWEGNKKVVKELEAAQMKAAKTILGCSRRTSNAAVRAELGIQSLRSGRDARKLTWQYRMCGMGEERLPRIVWEAKWANKKRGRQPTGWVKVVDDVWKGLDIDEDETLETEGL-------------QGFKEKISVACAEREEQNLRKESKDKEGLEVYGMLKEGIGFKDYLHGP 357

[Close]

BLAST of Ec-00_007170.1 vs. uniprot
Match: A0A6H5KI62_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI62_9PHAE)

HSP 1 Score: 271 bits (692), Expect = 2.980e-77
Identity = 155/307 (50.49%), Postives = 193/307 (62.87%), Query Frame = -2

Query:  961 AGMLFADDFVGMSYTPRDFNYRL--TRRRIGKWRLSANVKKSAVNVCNKNREKTVE*RWKWGIKELAVVGQYIP-EYSLEKTARGMRTCPRVSNNGKT--GKVPPVLANRYLDTRIE*TVLKSVIVPPLGYTGEVLEENLQVVQELEEAQVDPTKSILGCSKRTRYPAVRAALRVRSLRSGKDGSKLTWQYGMCGVGCERLSRTAWEEKWVNKERG------MSTIHAVGQGC------R*RMEGV*N*RR*HAGNGKPGGFKKNTSVVCAEGEEYYVRNETNIDEGLEM*ALK---IGFKEYLHGP 1821
            +GMLFADDFVGMS TP     ++   ++   KWRLSANV+KSAV VCN+N+E+ VE RWKWGI+E+AVV QY      + K         +V+  GK   GK+ P+LANR+LDTRI+ TVLKSVIVPPL Y GEV E N +VV+ELE AQ+   K+ILGCS+RT   AVRA L ++SLRSG+D  KLTWQY MCG+G ERL R  WE KW NK+RG      +  +  V +G           EG+              GFK+  SV CAE EE  +R E+   EGLE+  +    IGFK+YLHGP
Sbjct:  156 SGMLFADDFVGMSDTPEGLQLQIDAAKKFTDKWRLSANVQKSAVMVCNENKEEPVEHRWKWGIEEIAVVDQYTYLGVEIAKDCSWNAHMSKVAEKGKARAGKLHPILANRHLDTRIKLTVLKSVIVPPLEYAGEVWEGNKKVVKELEAAQMKAAKTILGCSRRTSNAAVRAELGIQSLRSGRDARKLTWQYRMCGMGEERLPRIVWEAKWANKKRGRQPTEWVKVVEDVWKGLDIDEDETLETEGL-------------QGFKEKISVACAEREEQNLRKESKDKEGLEVYGMLKEGIGFKDYLHGP 449

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BLAST of Ec-00_007170.1 vs. uniprot
Match: A0A6H5LRL5_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LRL5_9PHAE)

HSP 1 Score: 268 bits (686), Expect = 6.940e-77
Identity = 154/305 (50.49%), Postives = 191/305 (62.62%), Query Frame = -2

Query:  961 MLFADDFVGMSYTPRDFNYRL--TRRRIGKWRLSANVKKSAVNVCNKNREKTVE*RWKWGIKELAVVGQYIP-EYSLEKTARGMRTCPRVSNNGKT--GKVPPVLANRYLDTRIE*TVLKSVIVPPLGYTGEVLEENLQVVQELEEAQVDPTKSILGCSKRTRYPAVRAALRVRSLRSGKDGSKLTWQYGMCGVGCERLSRTAWEEKWVNKERG------MSTIHAVGQGC------R*RMEGV*N*RR*HAGNGKPGGFKKNTSVVCAEGEEYYVRNETNIDEGLEM*ALK---IGFKEYLHGP 1815
            MLFADDFVGMS TP     ++   ++   KWRLSANV+KSAV VCN+N+E+ VE RWKWGI+E+AVV QY      + K         +V+  GK   GK+ P+LANR+LDTRI+ TVLKSVIVPPL Y GEV E N +VV+ELE AQ+   K+ILGCS+RT   AVRA L ++SLRSG+D  KLTWQY MCG+G ERL R  WE KW NK+RG      +  +  V +G           EG+              GFK+  SV CAE EE  +R E+   EGLE+  +    IGFK+YLHGP
Sbjct:    1 MLFADDFVGMSDTPEGLQLQIDAAKKFTDKWRLSANVQKSAVMVCNENKEEPVEHRWKWGIEEIAVVDQYTYLGVEIAKDCSWNAHMSKVAEKGKARAGKLHPILANRHLDTRIKLTVLKSVIVPPLEYAGEVWEGNKKVVKELEAAQMKAAKTILGCSRRTSNAAVRAELGIQSLRSGRDARKLTWQYRMCGMGEERLPRIVWEAKWANKKRGRQPTEWVKVVEDVWKGLDIDEDETLETEGL-------------QGFKEKISVACAEREEQNLRKESKDKEGLEVYGMLKEGIGFKDYLHGP 292

[Close]

BLAST of Ec-00_007170.1 vs. uniprot
Match: A0A6H5JTB2_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTB2_9PHAE)

HSP 1 Score: 271 bits (692), Expect = 7.900e-77
Identity = 155/307 (50.49%), Postives = 193/307 (62.87%), Query Frame = -2

Query:  961 AGMLFADDFVGMSYTPRDFNYRL--TRRRIGKWRLSANVKKSAVNVCNKNREKTVE*RWKWGIKELAVVGQYIP-EYSLEKTARGMRTCPRVSNNGKT--GKVPPVLANRYLDTRIE*TVLKSVIVPPLGYTGEVLEENLQVVQELEEAQVDPTKSILGCSKRTRYPAVRAALRVRSLRSGKDGSKLTWQYGMCGVGCERLSRTAWEEKWVNKERG------MSTIHAVGQGC------R*RMEGV*N*RR*HAGNGKPGGFKKNTSVVCAEGEEYYVRNETNIDEGLEM*ALK---IGFKEYLHGP 1821
            +GMLFADDFVGMS TP     ++   ++   KWRLSANV+KSAV VCN+N+E+ VE RWKWGI+E+AVV QY      + K         +V+  GK   GK+ P+LANR+LDTRI+ TVLKSVIVPPL Y GEV E N +VV+ELE AQ+   K+ILGCS+RT   AVRA L ++SLRSG+D  KLTWQY MCG+G ERL R  WE KW NK+RG      +  +  V +G           EG+              GFK+  SV CAE EE  +R E+   EGLE+  +    IGFK+YLHGP
Sbjct:  178 SGMLFADDFVGMSDTPEGLQLQIDAAKKFTDKWRLSANVQKSAVMVCNENKEEPVEHRWKWGIEEIAVVDQYTYLGVEIAKDCSWNAHMSKVAEKGKARAGKLHPILANRHLDTRIKLTVLKSVIVPPLEYAGEVWEGNKKVVKELEAAQMKAAKTILGCSRRTSNAAVRAELGIQSLRSGRDARKLTWQYRMCGMGEERLPRIVWEAKWANKKRGRQPTEWVKVVEDVWKGLDIDEDETLETEGL-------------QGFKEKISVACAEREEQNLRKESKDKEGLEVYGMLKEGIGFKDYLHGP 471

[Close]

BLAST of Ec-00_007170.1 vs. uniprot
Match: A0A6H5JDR4_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDR4_9PHAE)

HSP 1 Score: 267 bits (683), Expect = 1.150e-76
Identity = 160/330 (48.48%), Postives = 200/330 (60.61%), Query Frame = -2

Query:  901 AGMLFADDFVGMSYTPRDFNYRL--TRRRIGKWRLSANVKKSAVNVCNKNREKTVE*RWKWGIKELAVVGQYIP-EYSLEKTARGMRTCPRVSNNGKT--GKVPPVLANRYLDTRIE*TVLKSVIVPPLGYTGEVLEENLQVVQELEEAQVDPTKSILGCSKRTRYPAVRAALRVRSLRSGKDGSKLTWQYGMCGVGCERLSRTAWEEKWVNKERG------MSTIHAVGQGC------R*RMEGV*N*RR*HAGNGKPGGFKKNTSVVCAEGEEYYVRNETNIDEGLEM*ALK---IGFKEYLHGP---GTHSQWSRRDGMRRLPPPRR 1821
            +GMLFADDFVGMS TP     ++   ++   KWRLSANV+KSAV VCN+N+E+ VE RWKWGI+E+AVV QY      + K         +V+  GK   GK+ P+LANR+LDTRI+ TVLKSVIVPPL Y GEV E N +VV+ELE AQ+   K+ILGCSK T   AVR+ LR++SLR G+D  KLTWQY MCG+G ERL R  WE KW NK+RG      +  +  V +G           EG+              GFK+  SV CAE EE  +R E+   EGLE+  +    +GFK+Y HGP   GT  +   R G  RL   RR
Sbjct:   34 SGMLFADDFVGMSDTPEGLQLQIDAAKKFTDKWRLSANVQKSAVMVCNENKEEPVEHRWKWGIEEIAVVDQYTYLGVEIAKDCSWNAHMSKVAEKGKARAGKLHPILANRHLDTRIKLTVLKSVIVPPLEYAGEVWEGNKKVVKELEAAQMQAAKTILGCSKCTSIAAVRSELRIQSLRPGRDARKLTWQYRMCGMGEERLPRIVWEAKWANKKRGRQPTEWVKVVEDVWKGLDIDEDETLETEGL-------------QGFKEKISVACAEREEQNLRKESKDKEGLEVYGMLKEGMGFKDYPHGPMDAGTKLKVKFRTGDIRLRERRR 350

[Close]

BLAST of Ec-00_007170.1 vs. uniprot
Match: A0A6H5KUW5_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUW5_9PHAE)

HSP 1 Score: 271 bits (693), Expect = 3.990e-76
Identity = 155/307 (50.49%), Postives = 194/307 (63.19%), Query Frame = -2

Query:  961 AGMLFADDFVGMSYTPRDFNYRL--TRRRIGKWRLSANVKKSAVNVCNKNREKTVE*RWKWGIKELAVVGQYIP-EYSLEKTARGMRTCPRVSNNGKT--GKVPPVLANRYLDTRIE*TVLKSVIVPPLGYTGEVLEENLQVVQELEEAQVDPTKSILGCSKRTRYPAVRAALRVRSLRSGKDGSKLTWQYGMCGVGCERLSRTAWEEKWVNKERG------MSTIHAVGQGC------R*RMEGV*N*RR*HAGNGKPGGFKKNTSVVCAEGEEYYVRNETNIDEGLEM*ALK---IGFKEYLHGP 1821
            +GMLFADDFVGMS TP     ++   ++   KWRLSANV+KSAV VCN+N+E+ VE RWKWGI+E+AVV QY      + K         +V+  GK+  GK+ P+LANR+LDTRI+ TVLKSVIVPPL Y GEV E N +VV+ELE AQ+   K+ILGCS+RT   AVRA L ++SLRSG+D  KLTWQY MCG+G ERL R  WE KW NK+RG      +  +  V +G           EG+              GFK+  SV CAE EE  +R E+   EGLE+  +    IGFK+YLHGP
Sbjct:  216 SGMLFADDFVGMSDTPEGLQLQIDAAKKFTDKWRLSANVQKSAVMVCNENKEEPVEHRWKWGIEEIAVVDQYTYLGVEIAKDCSWNAHMSKVAEKGKSRAGKLHPILANRHLDTRIKLTVLKSVIVPPLEYAGEVWEGNKKVVKELEAAQMKAAKTILGCSRRTSNAAVRAELGIQSLRSGRDARKLTWQYRMCGMGEERLPRIVWEAKWANKKRGRQPTEWVKVVEDVWKGLDIDEDETLETEGL-------------QGFKEKISVACAEREEQNLRKESKDKEGLEVYGMLKEGIGFKDYLHGP 509

[Close]

BLAST of Ec-00_007170.1 vs. uniprot
Match: A0A6H5K739_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K739_9PHAE)

HSP 1 Score: 266 bits (680), Expect = 8.230e-76
Identity = 153/307 (49.84%), Postives = 191/307 (62.21%), Query Frame = -2

Query:  961 AGMLFADDFVGMSYTPRDFNYRL--TRRRIGKWRLSANVKKSAVNVCNKNREKTVE*RWKWGIKELAVVGQYIP-EYSLEKTARGMRTCPRVSNNGKT--GKVPPVLANRYLDTRIE*TVLKSVIVPPLGYTGEVLEENLQVVQELEEAQVDPTKSILGCSKRTRYPAVRAALRVRSLRSGKDGSKLTWQYGMCGVGCERLSRTAWEEKWVNKERG------MSTIHAVGQGC------R*RMEGV*N*RR*HAGNGKPGGFKKNTSVVCAEGEEYYVRNETNIDEGLEM*ALK---IGFKEYLHGP 1821
            +GMLFADDFVGMS TP     ++   ++   KWRLSANV+KSAV VCN+N+E+ VE RWKWGI+E+A   QY      + K         +V+  GK   GK+ P+LANR+LDTRI+ TVLKSVIVPPL Y GEV E N +VV+ELE AQ+   K+ILGCS+RT   AVRA L ++SLRSG+D  KLTWQY MCG+G ERL R  WE KW NK+RG      +  +  V +G           EG+              GFK+  SV CAE EE  +R E+   EGLE+  +    IGFK+YLHGP
Sbjct:   71 SGMLFADDFVGMSDTPEGLQLQIDAAKKFTDKWRLSANVQKSAVMVCNENKEEPVEHRWKWGIEEIAEGDQYTYLGVEISKDCSWNAHMSKVAEKGKARAGKLHPILANRHLDTRIKLTVLKSVIVPPLEYAGEVWEGNKKVVKELEAAQMKAAKTILGCSRRTSNAAVRAELGIQSLRSGRDARKLTWQYRMCGMGEERLPRIVWEAKWANKKRGRQPTEWVKVVEDVWKGLDIDEDETLETEGL-------------QGFKEKISVACAEREEQNLRKESKDKEGLEVYGMLKEGIGFKDYLHGP 364

[Close]

BLAST of Ec-00_007170.1 vs. uniprot
Match: A0A6H5KPT3_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPT3_9PHAE)

HSP 1 Score: 261 bits (666), Expect = 9.270e-76
Identity = 150/305 (49.18%), Postives = 185/305 (60.66%), Query Frame = -2

Query:  961 MLFADDFVGMSYTPRDFNYRL--TRRRIGKWRLSANVKKSAVNVCNKNREKTVE*RWKWGIKELAVVGQYIP-EYSLEKTARGMRTCPRVSNNGKT--GKVPPVLANRYLDTRIE*TVLKSVIVPPLGYTGEVLEENLQVVQELEEAQVDPTKSILGCSKRTRYPAVRAALRVRSLRSGKDGSKLTWQYGMCGVGCERLSRTAWEEKWVNKERGMSTIHAV------------GQGCR*RMEGV*N*RR*HAGNGKPGGFKKNTSVVCAEGEEYYVRNETNIDEGLEM*ALK---IGFKEYLHGP 1815
            MLFADDFVGMS TP     ++   ++   KWRLSANV+KSAV VCN+N+E+ VE RWKWGI+E+AVV QY      + K         +V+  GK   GK+ P++ANR+LDT I  TV  SVIVPPL Y GEV E N +VV+ELE AQ+   K+ILGCS+RT   AVRA L ++SLRSG+D  KLTWQY MCG+G ERL R  WE KW NK+RG      V            G+      EG+              GFK+  SV CAE EE  +R E+   EGLE+  +    IGFK+YLHGP
Sbjct:    1 MLFADDFVGMSDTPEGLQLQIDAAKKFTDKWRLSANVQKSAVMVCNENKEEPVEHRWKWGIEEIAVVDQYTYLGVEIAKDCSWNAHMSKVAEKGKARAGKLHPIVANRHLDTCINLTVFTSVIVPPLEYAGEVWEGNKKVVKELEAAQMKAAKTILGCSRRTSNAAVRAELGIQSLRSGRDARKLTWQYRMCGMGEERLPRIVWEAKWANKKRGRQPTEWVKVVEDVWKGLDIGEDETLETEGL-------------QGFKEKISVACAEREEQNLRKESKDKEGLEVYGMLKEGIGFKDYLHGP 292

[Close]

BLAST of Ec-00_007170.1 vs. uniprot
Match: A0A6H5JUL8_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUL8_9PHAE)

HSP 1 Score: 270 bits (690), Expect = 2.370e-75
Identity = 156/307 (50.81%), Postives = 191/307 (62.21%), Query Frame = -2

Query:  961 AGMLFADDFVGMSYTPRDFNYRL--TRRRIGKWRLSANVKKSAVNVCNKNREKTVE*RWKWGIKELAVVGQYIP-EYSLEKTARGMRTCPRVSNNGKT--GKVPPVLANRYLDTRIE*TVLKSVIVPPLGYTGEVLEENLQVVQELEEAQVDPTKSILGCSKRTRYPAVRAALRVRSLRSGKDGSKLTWQYGMCGVGCERLSRTAWEEKWVNKERG------MSTIHAVGQGC------R*RMEGV*N*RR*HAGNGKPGGFKKNTSVVCAEGEEYYVRNETNIDEGLEM*ALK---IGFKEYLHGP 1821
            +GMLFADDFVGMS TP     ++   ++   KWRLSANVKKSAV VCN+N+E+ VE RWKWGI+E+AVV QY      + K         +V+  GK   GK+ P+LANR+LDTRI+ TVLKSVIVPPL Y GEV E N +VV+ELE AQ+   K ILGCS RT   AVRA L ++SLRSG+D  KLTWQY MCG+G ERL R  WE KW NK+RG      +  +  V +G           EG+              GFK+  SV CAE EE  +R E+   EGLE+  +    IGFK+YLHGP
Sbjct:  301 SGMLFADDFVGMSDTPEGLQLQIDAAKKFTDKWRLSANVKKSAVMVCNENKEEPVEHRWKWGIEEIAVVDQYTYLGVEIAKDCSWNAHMSKVAEKGKARAGKLHPILANRHLDTRIKLTVLKSVIVPPLEYAGEVWEGNKKVVKELEAAQMKAAKIILGCSTRTSNAAVRAELGIQSLRSGRDARKLTWQYRMCGMGEERLPRIVWEAKWANKKRGRQPTEWVKVVEDVWKGLDIDEDETLETEGL-------------QGFKEKISVACAEREEQNLRKESKDKEGLEVYGMLKEGIGFKDYLHGP 594

The following BLAST results are available for this feature:

BLAST of Ec-00_007170.1 vs. uniprot

BLAST of Ec-00_007170.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5L244_9PHAE	9.830e-83	83.03	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A6H5JXN8_9PHAE	4.850e-79	50.81	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5KI62_9PHAE	2.980e-77	50.49	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5LRL5_9PHAE	6.940e-77	50.49	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5JTB2_9PHAE	7.900e-77	50.49	Reverse transcriptase domain-containing protein (F...	[more]
A0A6H5JDR4_9PHAE	1.150e-76	48.48	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5KUW5_9PHAE	3.990e-76	50.49	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5K739_9PHAE	8.230e-76	49.84	Reverse transcriptase domain-containing protein (F...	[more]
A0A6H5KPT3_9PHAE	9.270e-76	49.18	Reverse transcriptase domain-containing protein (F...	[more]
A0A6H5JUL8_9PHAE	2.370e-75	50.81	Reverse transcriptase domain-containing protein n=...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_00	contig	chr_00:11283096..11297089 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Properties


Property Name	Value
Length	2662
Hectar predicted targeting category	other localisation
Gene id	Ec-00_007170.1

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-00_007170	Ec-00_007170	Ectocarpus species7 Ec32 male_plus_femaleSDR	gene	chr_00 11283096..11297089 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_007170.1	Ec-00_007170.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	polypeptide	chr_00 11285071..11287062 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_007170.1.5	Ec-00_007170.1.5	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 11283096..11285247 -
Ec-00_007170.1.4	Ec-00_007170.1.4	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 11285587..11285730 -
Ec-00_007170.1.3	Ec-00_007170.1.3	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 11286616..11286731 -
Ec-00_007170.1.2	Ec-00_007170.1.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 11286993..11287087 -
Ec-00_007170.1.1	Ec-00_007170.1.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 11296935..11297089 -

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_007170	3UTR:Ec-00_007170.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	three_prime_UTR	chr_00 11283096..11285070 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_007170.1	CDS:Ec-00_007170.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	CDS	chr_00 11285071..11285247 -

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_007170	5UTR:Ec-00_007170.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	five_prime_UTR	chr_00 11287063..11287087 -

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at chr_00:11283096..11297089-
coding sequence from alignment at chr_00:11283096..11297089-

mRNA sequence

>Ec-00_007170.1 ID=Ec-00_007170.1|Name=Ec-00_007170.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=169bp
MRWRCFPGLLILAASQEFDVGNRGEQESTAATFLELALERFEARNGRPAT
FEENNFAFDGLQLIRVPKAGSSEASVIARRLGGCVPRGPCCAFPGDPPGS
CPLEGLMCPMVTGCVGHNMNQRRTMMLEDPSVFSMTNIRGVVNRMVSGFL
YTKSHSPPCARTDNVVRD*

spliced messenger RNA

>Ec-00_007170.1 ID=Ec-00_007170.1|Name=Ec-00_007170.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=2662bp|location=Sequence derived from alignment at chr_00:11283096..11297089- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
GCTTACGACTAGCCATTGATCGTTAGCGCCGAGCTTTGGGTCGGATATCA
AACAAAGGAGTGATTCGGTGTTGGAAAGAAGTTAATCAGAGGACGAAACA
GCAAATGTGACGGGGTGCACCTGATATATCGTTTAACGATGAGCGGTTGT
ACCAGATCTGCTGGCTAAATAGCGCGTGGCATGCGGTGGCGTTGTTTTCC
CGGACTGCTGATATTGGCGGCGTCGCAAGAGTTCGACGTTGGTAACCGAG
GGGAACAAGAATCTACGGCTGCTACGTTCCTCGAGCTTGCCCTTGAGAGG
TTCGAGGCCCGAAACGGGAGGCCAGCTACCTTCGAGGAGAACAATTTCGC
CTTCGATGGCCTGCAGCTCATCAGGGTGCCGAAGGCCGGCAGCAGCGAGG
CCAGCGTCATCGCAAGGCGACTCGGCGGATGCGTGCCTCGAGGCCCTTGC
TGCGCGTTCCCTGGAGACCCTCCCGGAAGTTGCCCGCTGGAAGGCCTAAT
GTGCCCGATGGTGACGGGGTGCGTCGGCCACAACATGAACCAGAGAAGAA
CCATGATGCTGGAGGACCCTAGCGTGTTTTCGATGACCAACATCCGCGGG
GTCGTTAACCGGATGGTCTCGGGCTTCTTGTACACAAAATCGCACTCTCC
TCCGTGCGCAAGGACAGACAATGTGGTGAGAGATTGACCTGGAACCCTGC
CTGCTGTGATGTCTCTCGCCTTTTGCCCAAGATCCTGATATTGCTACCTT
AGCCGTTTCTTCACCACCACGCCCACCGTGTCCGCGAACGTCGGGTTGGC
GAGAAAGGCAGATAGATGGATCAGCAGAGAGAGGTGCTTTAAACAACTTG
GGGGGACCAACTTCTGGTACACCCCTCAAGTCTGCAAGTTTCCCAACAAG
TGCCTCCGAGGGGGAGGTAGTCTTCGCATGCCATCGCGGCGAGACCATTG
ACTATGCGTCCCCGGTCCATGTAGGTACTCCTTGAACCCTATTTTTAACG
CCTACATTTCCAGACCCTCGTCAATGTTAGTTTCATTCCGTACATAATAT
TCTTCTCCCTCGGCACAAACAACAGATGTGTTCTTCTTGAACCCCCCAGG
CTTTCCGTTTCCAGCGTGTCACCTTCGTTAATTTCATACGCCTTCCATGC
GTCATCTACAACCTTGACCCACTGCGTGGATTGTCGACATACCCCTTTCC
TTGTTTACCCACTTCTCCTCCCAAGCTGTTCTAGACAACCTTTCACATCC
CACCCCGCACATGCCGTACTGCCATGTCAGTTTGCTCCCGTCTTTTCCCG
ATCGTAGGGATCGGACACGCAGTGCTGCCCTGACGGCTGGATAACGCGTG
CGTTTGGAGCATCCTAGGATGCTTTTTGTTGGATCCACCTGCGCCTCCTC
CAATTCTTGGACTACTTGTAAATTTTCTTCCAGTACTTCTCCGGTGTATC
CTAGCGGCGGTACGATTACACTCTTCAAAACTGTCTATTCGATGCGTGTA
TCGAGGTACCGGTTTGCGAGTACTGGGGGCACCTTCCCTGTTTTGCCATT
ATTAGATACCCTTGGACACGTGCGCATTCCACGAGCAGTCTTTTCCAAGC
TGTACTCCGGGATGTACTGACCCACCACTGCAAGCTCCTTGATCCCCCAC
TTCCATCTTTACTCTACTGTTTTCTCTCTGTTCTTGTTGCATACATTGAC
GGCACTCTTCTTAACGTTGGCAGACAATCTCCACTTACCAATTCTTCGCC
GCGTCAATCTGTAGTTGAAATCCCTCGGGGTGTAAGACATCCCAACAAAA
TCATCCGCAAACAGCATTCCCGCACCGAAGTTTCAACTGCGTTTACCCTC
TGCCCGGCTGCCTCTACAACTTTCACCAGATCATTGATGAACACCTGGAC
AGCAATGTTGGGGACAGCGTACAGCCTTGTGGGACTCCCTTTTCAATGAC
GAAGAATTTGGGCAGTTCTCCGTCTTGCATGACAGCGCTGTTCGTACCGT
CTTGTCATCTTCTTCAGCACTCTTCACATTTACCCCTTTATCTCAGACTT
GGACAAGTGTTTCCACAGACCATTTTTCCATACCGTATCGCATACCCTTT
CCTGGGTAAATCTTGCCTTCTTTCTTCAACACCTTCACAACCACCCCTTC
CCTTCATCTGCTTCGCGCATACCAGGTACTAGTTTTTCCACACCCAGTTG
TACAGCAGCACCATCAGCTGGATCATTCCCTTCCCCCCAAAACTTCATGA
ACTCGTGTACTATCCCATCCGCCCCTGCTACTTTGTGGCATTGCACTATG
ATTACACAATTCTTAACCTCGTCCTCAGTGAACAACCTCTCTAGCCCTAC
GTTTCCAGTTTTTGCCTTCGGTGTACCTTCTCCTGCCTGGGCCTATGCGT
CCACCTGCCTCTTTAACACTTGGTCAAAGCTTCATTCTCCAACGGCACTC
CAAGTCTGTTGCAGTGTCCTGTTAGAAGGTCCCCTTTTCTCTATCCACCG
CAACAAGCATTGAAACACACATTCCCTGCTTGAGGTACGGAGAAACGCCT
CATCACAATTTAACCTCTCGAGGGGGTTTTGATCACCCAACCATAGGGAA
CGTGGAACACGAGCTCTTCGGTGGCAGTTCAAGACGTGGTGGGATGTGGG
TAATAACTCTCG

protein sequence of Ec-00_007170.1

>Ec-00_007170.1 ID=Ec-00_007170.1|Name=Ec-00_007170.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=169bp
MRWRCFPGLLILAASQEFDVGNRGEQESTAATFLELALERFEARNGRPAT
FEENNFAFDGLQLIRVPKAGSSEASVIARRLGGCVPRGPCCAFPGDPPGS
CPLEGLMCPMVTGCVGHNMNQRRTMMLEDPSVFSMTNIRGVVNRMVSGFL
YTKSHSPPCARTDNVVRD*

mRNA from alignment at chr_00:11283096..11297089-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>Ec-00_007170.1 ID=Ec-00_007170.1|Name=Ec-00_007170.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=13994bp|location=Sequence derived from alignment at chr_00:11283096..11297089- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
GCTTACGACTAGCCATTGATCGTTAGCGCCGAGCTTTGGGTCGGATATCA
AACAAAGGAGTGATTCGGTGTTGGAAAGAAGTTAATCAGAGGACGAAACA
GCAAATGTGACGGGGTGCACCTGATATATCGTTTAACGATGAGCGGTTGT
ACCAGGTGAGAGTCAATGCGCTCTGGTGGCATGCTGTGAAATTTCCAAAT
TTTCACGACAACCCGCGATGCAGAGCATTACAGCAGTAGGCCCCTATGTA
AAGGCCGCACCGTGGCACGAGATTGAACGGGCCCTATCGAGGGCACCCGG
CCTTACAGGATTGGCCGTGTTGTGGCCGGCACCAAAGCGGACGATGCAGT
TACAACCGGTGTTTCGCTATGACGTTCATCATGCTTATTCAACCCTCTCT
TCGTCTCTCAGGGTGAAAAGCATCGCCCCCCCCGGGCGAGGGGGGCATAA
GGTGATAGAGGTCGAGTAGGTCTGCGAAAACGTTGGTGTGTGCTGCACGG
CTCGCGATGGTGGATGCTCTTGACCATTTCATTTCGTGGGTCATGCAGAG
TTGGTGTTCAAAGCCTTCGCCCCATGCAACCAACAGCCATCACGCGTATC
AACAATCAATCCTGCATTCGGCGGCAATAGTCGATATGTTCACTCTTTTT
TGTGTAAATATTTTGGCGATAGCAATAATTGTAACATACGTTTAGGAGAA
ACTAAGAGAGACGGAAATATATACTGTAGGAACAACATCACGGCCCCCAT
AGGGATAAAGTAAAGAAGACCCGCGGTAATTTGTGTACATGTGTTGCATT
ATTCCCCTAACTCCAATGGGCGGGGGCGACACAACTCGAAGATAGTTAAG
GAGATGTCACGGTAGGTATGAAGAACGTGAATGATCGTTTGCGAAGAGAA
AGGATGCGTGCCGATACAGATATTGTGGATGATGAAGGTATGCATGTGAG
GATAATATGGATAAGCTGCGCACTTGGCAAGGTTCGTACAGCCCGGAGAT
GGCACAAAGAATCTATCGAGACGGACGTGACGCGAATTCCAGCTTGACCG
GGTGGTAGCATGGTGTCCACGTGATGGCAGGAATGAAGGGTGAATAACGT
GAAAGAAGTAGTTGGTATGATGTCATGCAGAAGACGCACGTGAAGCGCAA
GTGAGTTCTCGGTCCCACCGTCCGGGACCACTCCTATTGCACACGCACGA
ATCATGTCATCTGTATACTCACCGGATGGTCGTCGTGACGTGATACATTT
CTTGTTATTAGTATGAAAAAAAGAAAGAAAAATGGCTCGATTTTTGTATT
TCTACAGCAGTATGGACCGGACGCCGACTGTACATAGAAGTCGTAGGAGT
GTCGGCTTCGTTGTGCTGTCACGGCATCGTCGAGTGTCGGCTTAGTTGCT
CTGTCACGGCATCTTCCACGCACTTCTGCCAGTGCTGGTTTGTTGATTGG
AGTCTTGTAGGTCGAGATACAGCAGTGGGATTCTCGGGTTGTGGAGCCAA
AAACGTCTGCCTGCAACCACAGCAAAAAATTGGTCGCATAGCTTGATAAC
TGCTGTGTTTTTGCTACAGCAGTTATGGCCTAGACGCCGAACGACGTCCG
CGTACTACCGCAACGACCTAACTAACTGGACGGGATACTTCCTGCCACGG
CGAACCATACTACAATACGTGCGTTGTGCGGCTGCCACATGTGTCGACGA
CAGGTACACGTAGAGCTCTCGCCATGTTGTCGGTACCGCGCAGGCGGAAC
CCACGGAGATCTTCCACATGATGCTGATGCTACAACGACAGCAGTACTAC
ATACTGTGCGTAAATGTCGCAAGAGAATGGTGTTGTGCTGTAACGGTTTC
TTCCACGCACTCTCCTAACGGTGCTTGCGTCGATTGGAGTCTTGTAGGCC
GAAAGACAAGACAAGAGTGGGTTGGGTTCCCGGGTTGGTTGTGGAAGCAA
ACCTGCCCGCAACAAGGGTTAGGGAAAGGGATGCGGTGTTTTATTTATTA
TCCCGCTCAACGTTTTTAATTTTTTTGCGACATGGTTGCATTTTTTTTTG
CCACTGCGAAGACCGCTGGATCTTTACGGAGTCCATATTTCGCATTTAAT
TTGTCATTTTACACCGAACGACGCAGGACGGGTCGACCTTCATCATGCCC
ACCTTCGACCTTCTCATCGACCAGACGCCGACTGTACATATATATGTGGA
GTTAGCTGTGTTGTGACGGCATCTCTCACGCACCCACTCTTTCTGCCTGT
CCGTGCTGGTGTGTCGATGGGAGTCTTGTACGTCGGGATACAGCAGTGAA
CTTCTCGGGTTCTTCATGGAAGCAAGGTTGCCTGCAGCAACGAGAAAAAA
AAATTGCGTGCATGCATATGTAGATAGCTCGATCACTGTTTTTGCTTCAC
AGCAGCGTGGACCAAACGCCGAACGATGTTCGCCTATTACGGCAGGCAAC
GACGATGACTCGATGGGATACCTCCTGCGACGACGAGCCATACTACTGTA
TTACTATGCGATGGAAACATCCATTCGCGTGTCGTGCGCCTGCCACATGT
CCACCACCAGGTACACGCAGAGCTCCCGCTCTCTCTGTAGTTGTTGCCGC
GCAAAGGCTCTCCTCGGGGATCTTCCACATGGTATATACTACTGTACATG
AGAGTCGTGATGGGAGTGTCGAGTTACTTGTGTTGTCACGGTAGCGTCCA
CGCACACTCTCCTACCGGTACTTGTGTGTCGATTGGAGTCTTTGTGGGTC
GATATACAGCAGTCGGATTCTCGCGGGTTGTGGGAGCAAGTCTGCCTGCA
GCAACAGTGGAGGCAGTGTTCCAGTTGTTTCCACTTGACGAGAATATTTA
TATATTGTTGTTTTTTCAAACTAAACAACACCAAGTGTCAATTTCAGGTT
GGCATTTTGTTTGTGGTACTTGGATATGAGTCCGATATGTGCATCCTCTG
TGGGGGATACGCGTATGGGAAGTATGGGTGTGAGGGTATGTATGCGGTTG
TGGTCCAAGTGCGGCCCCCCCGGGAGCACACAGCGGGAGGGTATGTATGC
GGTTGTGGTCCAAGTGCGGCCCCCCCGGGAGCACACAGCGGTGTGCTCCC
GGCACTTGCCTGAGGGGCTTGCGTGTCGAATACCAGCTTGCCTGAGGGGC
TTGCGAGACGAATATATACAATACATGGTCCTTTTTTATCAGCTGTTCCT
GGGATAACATAGTCCCCAGCCTCAACACCACAGACCGCTGAGGGCGGCAG
TACACTAACACGATATCGAGTGGAGCCTAGCTAGACCAGGTGTTGGTACA
CCGATGACGGAAAGAGAGAGAGAGTTGGAAGAAAGAATGAAGAAAGCGAA
GGCCGAGAGGGCGGAGTTACGGAGGAAACTTGAGGAGGCAGGGGAGCGCA
GTTCAGCGGGGGACGCTACGAGAGATAGGGTGGACGGCGCTGGGTACGCG
TCGGGGTATTATAGGAGTGGAGCAGCCGGGGTGGCGGACACCTTTGGAGC
CGGGGGAGCGGCTACTTCTTTTCGAGATGGTCCAGTGCAACAGCAGTACA
GGGACCACAAGCCACCAGTGTACGATGGCAACTTCCCGCTCTTCAAGACG
ATATTCGAGGTCTTCCTCGCCGGCGAAGATCTTGGGCACACACTCACTCC
GCCGGCGAGTCCTGATCAACGCATCTGGCTCATCCACACCTCCAGGAGCG
AGAACATAAGATTCCACAGTGAGAAGCGTGTGCGGGATCACGAGCGTGCT
TTCGATTACTTGAGGCGAGCCACGAAGGGGGCGAAATTCCAATCGACGAT
TCTTCCTGTAAGGAATGTGTCGGGGGCGTGGGAGGCTGCCCGGGAGTTTT
GTCTTCCGACGAGTAGCTCTGAGAAGGAGGCCCTGAAGTTGTCCCTCGCT
AACATGAAGATGCACCTCGGAGAGGACCCGCAAGACTACTTTCTGAGGTT
TAACAAAGTGCTGAAAACGGTTCGCGCTGTCAACGGTTATTAAATCCCGG
AATGTGAGGTCCTTGCGACTTTACGTAGAAGCCTCTCGGCAGACAACGAA
AAGGTCAAGATCGTGCTCATGCATAATCACACGCTCACACGCAGAAGCTC
GGTGATCGTGCGCAGCGGACGGCCGCGCCGGCTAGCGATCCGCACGCTCT
CCGTTTTGGCGGAAATTCACGGCCCAACGGTAACGGCGGCAGCGGCGGCG
GTGGCGGCGACGGCGGTGGTGGTCCGCAGCGTAGGACCGGTGGGTTTTCC
CAAGGCAGACAACAGGGTAGAGATGGACAGCAGCAGCCGGGGTGAGGAGG
GGAAACTCAAGGAGAGTACAACGGGGGGTATCGCCCGCAGCAGCAGCAGC
CGCAACAGGCGTTTCAGCAGCAGGCGCCGCAGCAGCAGTATCAACGGAGA
TTCCCTCAGCATTTTCCGCAGCAGTCGTTTCCGCAGCAGTCGTTTCAGCA
GCAGCAGCCCCACAGCAGCAGCAGCCCCAGCAGTCCACTCCCGCGATGGC
TATGGGCTTCGTTCCGGGTGGCCCCAGGGACCCCGGGCGGCACGCAGCGT
GGCCGCAGGAGGCGTCCCCCATTCCCCCGGGATCACCGATGTGCGCCGTG
CCCATGTGTGGTCGCTGCGGTCATGTCGGGCACACGGCCATCATCTGCCA
GGCTCCTCCGCGATTTTATGGTAGGTGTCCTATTTGTGGTGAACCCGGCC
ACACGGCGCGCAACTGCAAATTTAACACATCCAACAATCTGCAGCAGCCG
CCGCGCCAACACGCGGCGGCCAACACGTCTCAGGCACCCCACCTTACCAG
CCTTTTTCGCAGCAGCCTTTTCTTTTCCCCAGCACTCCCATCTCAACAGC
GCGGAGCCGGGGTATTCGGCAAGTTGTGTAGACGGGCCGATAGGGCACCA
TTGACCCGTGTCGGCGCCTCTTCCGCAGTAGCACCTTGCCGTGGTACATC
AGGATGGTTTCAGCGGAGGTGTGCAGCCATGGCAGGGTTCCGGCGGCAGC
GGCTATGGTGGCGGGCCCCAGCAGCAGCAGCCAGAAAAGCAGCTTGGCTC
GGTGGGTGGAGCCGGTAGTGGGGTCCGGGTATCTGTGGGTGATGGGCAGC
AGGAGCCGCAGCAGCAGCTGCAACAGCGGGAGGGCCACGCGTGGGGGGGT
GCTTCCGGCGTGGATACACAGGTCAGTGGCGGTGAGGGTGAATGCGTTGA
TGGAGTAGGGGGGAATGGTCATGCCGGTTCGTACGGCACCGTAGAGCCGG
TACGTCCCCCCCCCGATCGTAATGCTCTTCAAATTTTCGGCCAACACCGT
CACCCTGTAGCGTATCCGCCGGCCCCTGTCCTCACTTTGCTGTCGGCGTC
GGGGCGTACCGACTGGTGGGTTGGTGATAGTGCCGCGTCTACCCACAGCA
CTAGCAGCACCGATTTCGTGTCGTCCCCGGTCGCCGCGATGGTCCCGGGC
ACCTCGACGGACGCAGCGGCGGTGGCGGCGGCATCGGCGGCGGGGGGGGC
AGCAGCAGCGGCAGCAGCAGCGTCGTCCCCGGTCGCCGCGATCACCTCGA
CGGACGCAGCAGCGGTGGCGGCGGCGTCGGCGGCGGGGGGGGCCGCAGCA
GCGGCAGCAGCATCGTCGTCCCCGGTAGCCGCGATGGGCCCCGGGCACCT
CGACGGACGCAGCAGCGGTGGCGGCGGCGGGGGGGGCGGCAGCGGCGGCA
GCAGCAGCGTCGTCCCCGGTCGCCGCCATGGCCCCGGGCACCCTGACCTG
CAGCAGCGGCGGAGACGACGGCATCTGCGGTTTCGAGAGGGGCGCGTCGT
ACCCTTTTGACCCTGAAGGATTTTCTATCCTGGAGGTGCGTGTGGATGGA
GAGGAAAAGTATGGTGGAGAAACGGATGACCGGAGCAGCGGTGGCCGCAG
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGGCCGCAGCGGCGGCG
GTAGCGACATCGGTGACGGGGGGAACGGCAGCGGCAGAAGCAGCAGCGGC
GTCCCCGGTCGCCGCGTTGGCGTCGGGTGTCCAGACGGCCGCACGGGCGG
CGGCGAGGGGTTACATGGAAACTGGAGTGGAGCTCCGACGCACCCTTTTG
ATCCCGCAAAGATTGAGGAGGAAGTGAGCTGCAGCAGCAGCAGCAGGAGC
AGCAGCGAGGAAAGCGGCGGTGATGGGAACGGGGGTGAGGGGTTGTTAGA
TGAAACCTGGAGCGGAGCCCCGACGCACCCCGTCGACCCCGGTAAGACAT
CTTCGCGTGGCGCGAGGAGACGGGGGGCGGTACCAGGGGTGGCGTACCTC
TTCGATAGGGGCAGGAACGGGAGTGGCAGCTCCAACGGCGGCAACGGCGG
CCGCCCCGACGGGAGTGGTGGCTTCGGCCAGAACTCCAGCGGCGACACCG
GCGGCAGCAGCGACGAGAGTGGTGGCTTCGGCCAGAGCTCCGACGGCAGC
AGAAGACGGCAGCGGCGGTTTTGGCCAGAGCCCCGTCGGCGGCCGCGGCG
ACAACGGCGGCGGTGGTGGAGGCGGCAGCAGCGACGTTCCCGGCAGCCGT
GTTGGCGCTGGAACTCGTGACAGTCGTGGCGGCGGCGATGGCAGCGGCGG
CAGCAGCGGTGGCGCCCTCGAATCGACCGGGAACGGGGAGGACACGGTGA
CAGTGACGACCTCACCTTGTTACAGCCAAGTGGGAAATCATGTGAAACGT
TCACGACTTTGTTCGGTTTTGCGAGCAGCCATGGACGTTTCAGCTTCGCC
ATTTGGCTTCGTATTATCATTATTATTGTTATTTTTTCTGTTTTTCCCTT
GCAAGCGCACCGTGCACTTTGATGCGGAAAACACGTGTGCCACGGCGTGT
GCGTAATGATTTTTTTCTGTACTTGGTTTCATGATAATAAATGTTCGCTG
CGACAAGATAAGCATTGCCACAACCTGTGGAATAGGAAGCAGCAGGTGGG
TTTTTATTTATGTTTGTTCCTTGCTTCTTCGTATGTTTTCAGTCGCGGTT
TACCTTGCAGCTGAATACTTCATATTACTTCCCTATTCTTTGGCGGGAGT
ACGTTCAGTCGCGTTTTGCGCTTAGGGTGTTTCGATACTTTTGGTTTGTT
TGTTTTCTTATGTTAGGTCCTGAGTTAAGCGGTCTCTCTCTGCAGTGTGT
TTTTGGCCGCGCGCAAGAAATGGGATGATAGCGCGTTGCTTGACGTGCGT
GAAGGCATGTGGCTCAGGGAGCAGGGTAGCTTTTGGAGTTCCAGTTGCAA
ATGCAGTTTTCATACGGCACGAATTTTTCCGGCGTTTGATGCCATGAGTG
TAACGTGTTTTCATGTTTTCGGTTTGTATCGCATGTTTTGCTGCTCTTGC
ATCGAAAATCATGGGGGGGGATGTCATGTATGACCATGATTCTAGAGGGC
GTGAGCAGCAATCGAATTGGTTCGTTTTCTGGCCTTGTCTATTTGTGTTT
TAGGTGAACGGCAAAGCAGGGGGGACTGTTGACATTGTGATATTAGCTCG
GGGTGAATTTTGGGAGCTGACAGCAGGGGGGCTGTTTGCGTGGATGCTTG
CTTTTATTTTTTATCGTTTCTTGGACAACAGCGACGGTACCGATTGGCGG
GTGCGCTCTGTTTAGAATTTGGTGTTGGAGGAAGGGTTTGACATGTTTTG
ACGATTAATGGTTGGGGCCATTGTGCTTTCCGAATTCTCGTTTTGATTGG
TCAAGAAGTTGACTTTTTGTTTTGTTTGAGGATTTGGTGTCAACTCTTTT
ATATGTTGTTTGTTCCAGAAATGTCCGTTTTCGTTCCGGCGCCATTCTGA
TGTAGCACAAATAATCGTTGGGTACTTTTCTGAGGATGATTCTTTTGTGT
CAACGGTTTGAGATTATTTCCAGAGACGAACGCTTTGGATTCGTGAATAA
ACTGATGGAGACGCTTTGTGTTGGATGCGTAGCCAGTTTTGTTGAATAAG
CTTTCTCAAGGGGTGTTTTTCTATGTTTGCTGATTGCGTTTTTGCGTTGG
TTGCAAGATCGTACATCGTATCAAGTAGGAGGGCTGTTTGTGGTACTTGG
ATATGAGTCCGATATGTGCATCTTCTGTAGGGGATACGCGTATGGGAAGT
ATGGGTGTGGGTGTGATGGTATGTATGCGGTTGTGGTCCAAGTGCGGCCC
CCCCGGGAGCACACAGCGGTGTGCTCCCGGCACTTGCCTGAGGGGCTTGC
GTGTCGAATACCAGCTTGCCTGAGGGGCTTGCGTGACGAATATACAATAC
AATACATGGTCCTTTTTTATCAGCTGTTCCTGGAATAACATAGTCCCCAG
TCTCAACACCACAGACCGCTGAGGGCGGCAGTGCACTAACACATTTTTCT
TTTCCACCGCCGTTTCTTACATGCCTTTTTCTTCTTGTGAAGTTTTGCCG
TTGCGATTGCCATCGTAACTTAAGTATTTGTGTCTTCAAACCTTCTTAGC
CGGCCTTCAAACGTCTTGTTGATAAGTCTCCGCGTTTGCTTCTCCTCGCA
TGAGTCATATATATGCAGTTATCACCTACGCTTTGATTTTCACGATGGCC
GTCTTGCATTGGTGAGTACCTGCGTTATACGGAAGGATTGCCTTCAAGTC
CGTACTTTTTCCCCTCACGTTTCCTTCCCCGATCCTTCTTTGCGCATCAC
ATGTGTGTGATTCCTCGTCGTCGGCCTCCTCGATACTTGTGGATTGCCTG
TTGGAAATTATGGGAATCCCTTCATTCCGAGAGAGCCATAGGTCGGCATC
CGGCCTTTTTCTTTATCATATGCGTGTTTCTTATTGTGAAGTTTTGCCGT
TGCGCTTTTGCCATCGTCGCTTAAGTGTTTGTGTCTTCAAACCTTCTCAC
CCGGCCTTCAAACTTCTTGTCGATAAGTCTCCGTGTTAACTTCTCCGCGC
ATGAGTAATATGCAGTAACGACCTCCGCTTTGACTTTACCATGGGTATTT
TACCTCACCGTCTTGCATTCGTGAGCACCTGCGTTATACAGAAGGGCCGT
TCCACGACGCAAACGTCGACGTCTTCGTTTTTTTTGTGTTTCATTCTTAC
TCTTTCCTTGCGGCGGATTTTCACGCCGACTTCGAACGTGGGGTGCAATT
TCGTCTCTTCGTACCTTCCTCGTCGGCCTTCTTCATCGTTATGTACATTT
TCGGCTTTTTGATTCCCGATAGACAAGACTACGGAGTGGGATGTCCCTTT
CACCCCCAACGGGATCGCGCGCTCGTCGAGTGCCGAAATTCTTCACCACT
TCCTTGCCTCCCCCAACACCGTCCCTTCTTCCCGCCCCTACAAAAACTCT
CCCCTTCTTCTTCTTTCCTTCCTCCAGGACACTCACCACCATCCGTCCCG
GATGTTGCCCACAGCATTCTTAACCCTAGTGTCTGTACATATGTAGGGTT
TTCCCAAAACGGGGACAAAAAAAAACATTTGGGCCGGATTCATTTTTGAA
AATCTCAGCCGTTATTGCACCCCCTGTTTCACCAGTGCTTCTGTACGAAC
AGCTGAGTACCTTCCACATGCGTCTCGCACCAAGGAGACTCTCCACAAAG
TATCCGCCACACACCACTCACATACGCGCATTACCAGCGCTACAAAAAAT
TACCACAATTGGGTGCGCGTGGATTGCTGCCACTCGCATAAACTATGCGT
ATGTATTTTACTCGATAACCCTTCCCTAATTTCACTCTGTTTCAGCAATG
CGGACGACACATGATTGCCCCACCATCATTGGCCGCGCCGTAAAAAAGTG
GACATTTCTTCATGTCTCTTCATATTAAGCTTGTGTTTTGGCACTTCTTG
CGGCTATTTGTGCAGGGCGTCAGCTATGGTAAGCCTCCGGTGTGTTTGGA
TGCACCATCCTTGTTACAACACTGGACATAGGCCGCATACACACTATTTT
CACTTTGACCATAATTGTCACAATTCAAGTTCGTCGCTGAACGTCGTTGT
CAACCGGCCCTTGCTGCCTTTGACGATCCCGTTCATACCCCGTTTGAAAC
AGATCTGCTGGCTAAATAGCGCGTGGCATGCGGTGGCGTTGTTTTCCCGG
ACTGCTGATATTGGCGGCGTCGCAAGAGTTCGACGTTGGTAACCGAGGTA
TTTGACCTTGGAATGCTTAATGCAGAACCCGCGAGGCAGCAAGAAGGATT
ATGTCTCTGAACTCCTTTTATCCCGGAAGTCCCGATAAGGCATCCGAACC
ACTAGGGCCAAAAGTAAAATCACTCTACGATTATAGGTAGAGTCTAATAT
CATCGTAGTGTTGATTCCTTTGGGCACCACAACGAAGAATCTTTGTATTC
GCAGACTACCGTTTGAACCGCAATGAATGTGTCAGGAAACATGCTTCTCA
ATTGTCAGGGGAACAAGAATCTACGGCTGCTACGTTCCTCGAGCTTGCCC
TTGAGAGGTTCGAGGCCCGAAACGGGAGGCCAGCTACCTTCGAGGAGAAC
AATTTCGCCTTCGATGGCCTGCAGGTGGGCAGATTGTGTTCTGTCGAGGC
GCCTTTTGGAGTGGAACGTTTGATGTGACGGTAGTAAACACGGCGAATAA
ATGCACCCTTAGCGTATCGTTGTACAGAGAGTTGGGTTGGAAGTTGTCGA
TCCCGTCCGTCGACCGGAAGGGGTAGATATGTTGTTTACCGTTTGGGCAG
CAGGACTCCCGCTATGCGTCTCTTTCGTCAAAAAAGAGGTAAAGCGACAG
CCCGATGGTTCTCACTGCCTTCTGCAGCGTACAGAGCCACTGTTGACTTC
AGATGCAACCCGTTCGGGGCTGCTGAGGACGGCGATGCTGAGGATGATTC
TACCCTGTTCGGCGACATGTGGCCAGACTACAGGTTAAGAAGTGCGGTGG
ATGACAAGAGGCACACAAGCACCAACTCTTTCGTTACCCCTTCACTGCGA
CTGTCCACGGCAACGACGCCCCTAACACTACATCTAAATCGTTGTGACAG
TGCGCCTCGTGCACAGAACATACAACTCCTGCACTTTTGTTGCCTGGAGC
GGAGCTCTGGTTGGAGCTTGACCACCACCACACCATCTCAAAACAATGGT
GCTAGAATCAGCGTCGCGGGAGGGGTGCCCTGCGTTCGACCATTGGATGA
ATCTTTGTCAAACAGGTTTTATCAGTCTTGTGTTCTTTCAGGCGATCAGT
TGATCGTCTCCATGCCATGGCAAAGAGGCAACTAACCCCGTCGTTATCTA
TTCCTTCCTTCTATCATACGCCCCCCGCCCGTCGGTTGTGAACCTGGGGC
ATAACTGTGCTGCTCGTGCCCCCCTCATACCATTCCTCACTATGCTTAAA
TGACAACGCCAAATGTTTGGTGGTCGTCGCTCCTGCAATGTCCCCGTTAT
TCTGCGAAGCTCATCAGGGTGCCGAAGGCCGGCAGCAGCGAGGCCAGCGT
CATCGCAAGGCGACTCGGCGGATGCGTGCCTCGAGGCCCTTGCTGCGCGT
TCCCTGGAGACCCTCCCGGAAGTTGCCCGCTGGAAGGCCTAATGTGCCCG
ATGGTGAGGTGATCATCACTCGTCGAGTGTGTGGCCAATTCACAATGATG
TGACCCCTTAAACAATCGTTCGTTCTTCAGGTGTATCTTGCGGGGGAGGA
GTGCTAGCTTGGGCTGAAATATTGCCTGAAAGACGTTCGATATGGTTATC
TCGACTTTCGGCACACCACAGGTTCGGCCTCGGGTAAGCGCCTTCTTGAC
ACCGTTTACCCTTTTTTTCCCGACCCATGTCAGCGCGAACCACCGTTCGT
TACCCACAAGTTTGTCGTCACTCGCTGCGTCTGGTTCACAACCTAACACA
CCGTCTGACTTCCCTCGTCACTGCACCTCAACCTATACATAGGTGACGGG
GTGCGTCGGCCACAACATGAACCAGAGAAGAACCATGATGCTGGAGGACC
CTAGCGTGTTTTCGATGACCAACATCCGCGGGGTCGTTAACCGGATGGTC
TCGGGCTTCTTGTACACAAAATCGCACTCTCCTCCGTGCGCAAGGACAGA
CAATGTGGTGAGAGATTGACCTGGAACCCTGCCTGCTGTGATGTCTCTCG
CCTTTTGCCCAAGATCCTGATATTGCTACCTTAGCCGTTTCTTCACCACC
ACGCCCACCGTGTCCGCGAACGTCGGGTTGGCGAGAAAGGCAGATAGATG
GATCAGCAGAGAGAGGTGCTTTAAACAACTTGGGGGGACCAACTTCTGGT
ACACCCCTCAAGTCTGCAAGTTTCCCAACAAGTGCCTCCGAGGGGGAGGT
AGTCTTCGCATGCCATCGCGGCGAGACCATTGACTATGCGTCCCCGGTCC
ATGTAGGTACTCCTTGAACCCTATTTTTAACGCCTACATTTCCAGACCCT
CGTCAATGTTAGTTTCATTCCGTACATAATATTCTTCTCCCTCGGCACAA
ACAACAGATGTGTTCTTCTTGAACCCCCCAGGCTTTCCGTTTCCAGCGTG
TCACCTTCGTTAATTTCATACGCCTTCCATGCGTCATCTACAACCTTGAC
CCACTGCGTGGATTGTCGACATACCCCTTTCCTTGTTTACCCACTTCTCC
TCCCAAGCTGTTCTAGACAACCTTTCACATCCCACCCCGCACATGCCGTA
CTGCCATGTCAGTTTGCTCCCGTCTTTTCCCGATCGTAGGGATCGGACAC
GCAGTGCTGCCCTGACGGCTGGATAACGCGTGCGTTTGGAGCATCCTAGG
ATGCTTTTTGTTGGATCCACCTGCGCCTCCTCCAATTCTTGGACTACTTG
TAAATTTTCTTCCAGTACTTCTCCGGTGTATCCTAGCGGCGGTACGATTA
CACTCTTCAAAACTGTCTATTCGATGCGTGTATCGAGGTACCGGTTTGCG
AGTACTGGGGGCACCTTCCCTGTTTTGCCATTATTAGATACCCTTGGACA
CGTGCGCATTCCACGAGCAGTCTTTTCCAAGCTGTACTCCGGGATGTACT
GACCCACCACTGCAAGCTCCTTGATCCCCCACTTCCATCTTTACTCTACT
GTTTTCTCTCTGTTCTTGTTGCATACATTGACGGCACTCTTCTTAACGTT
GGCAGACAATCTCCACTTACCAATTCTTCGCCGCGTCAATCTGTAGTTGA
AATCCCTCGGGGTGTAAGACATCCCAACAAAATCATCCGCAAACAGCATT
CCCGCACCGAAGTTTCAACTGCGTTTACCCTCTGCCCGGCTGCCTCTACA
ACTTTCACCAGATCATTGATGAACACCTGGACAGCAATGTTGGGGACAGC
GTACAGCCTTGTGGGACTCCCTTTTCAATGACGAAGAATTTGGGCAGTTC
TCCGTCTTGCATGACAGCGCTGTTCGTACCGTCTTGTCATCTTCTTCAGC
ACTCTTCACATTTACCCCTTTATCTCAGACTTGGACAAGTGTTTCCACAG
ACCATTTTTCCATACCGTATCGCATACCCTTTCCTGGGTAAATCTTGCCT
TCTTTCTTCAACACCTTCACAACCACCCCTTCCCTTCATCTGCTTCGCGC
ATACCAGGTACTAGTTTTTCCACACCCAGTTGTACAGCAGCACCATCAGC
TGGATCATTCCCTTCCCCCCAAAACTTCATGAACTCGTGTACTATCCCAT
CCGCCCCTGCTACTTTGTGGCATTGCACTATGATTACACAATTCTTAACC
TCGTCCTCAGTGAACAACCTCTCTAGCCCTACGTTTCCAGTTTTTGCCTT
CGGTGTACCTTCTCCTGCCTGGGCCTATGCGTCCACCTGCCTCTTTAACA
CTTGGTCAAAGCTTCATTCTCCAACGGCACTCCAAGTCTGTTGCAGTGTC
CTGTTAGAAGGTCCCCTTTTCTCTATCCACCGCAACAAGCATTGAAACAC
ACATTCCCTGCTTGAGGTACGGAGAAACGCCTCATCACAATTTAACCTCT
CGAGGGGGTTTTGATCACCCAACCATAGGGAACGTGGAACACGAGCTCTT
CGGTGGCAGTTCAAGACGTGGTGGGATGTGGGTAATAACTCTCG

Coding sequence (CDS) from alignment at chr_00:11283096..11297089-

>Ec-00_007170.1 ID=Ec-00_007170.1|Name=Ec-00_007170.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=507bp|location=Sequence derived from alignment at chr_00:11283096..11297089- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGCGGTGGCGTTGTTTTCCCGGACTGCTGATATTGGCGGCGTCGCAAGA
GTTCGACGTTGGTAACCGAGGGGAACAAGAATCTACGGCTGCTACGTTCC
TCGAGCTTGCCCTTGAGAGGTTCGAGGCCCGAAACGGGAGGCCAGCTACC
TTCGAGGAGAACAATTTCGCCTTCGATGGCCTGCAGCTCATCAGGGTGCC
GAAGGCCGGCAGCAGCGAGGCCAGCGTCATCGCAAGGCGACTCGGCGGAT
GCGTGCCTCGAGGCCCTTGCTGCGCGTTCCCTGGAGACCCTCCCGGAAGT
TGCCCGCTGGAAGGCCTAATGTGCCCGATGGTGACGGGGTGCGTCGGCCA
CAACATGAACCAGAGAAGAACCATGATGCTGGAGGACCCTAGCGTGTTTT
CGATGACCAACATCCGCGGGGTCGTTAACCGGATGGTCTCGGGCTTCTTG
TACACAAAATCGCACTCTCCTCCGTGCGCAAGGACAGACAATGTGGTGAG
AGATTGA

Synonyms

The feature 'Ec-00_007170.1' has the following synonyms


Synonym
Esi0537_0001
Esi_0537_0001