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Homology
BLAST of Ec-00_007150.1 vs. uniprot
Match: A0A6H5K8X9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8X9_9PHAE) HSP 1 Score: 401 bits (1030), Expect = 8.060e-135 Identity = 286/338 (84.62%), Postives = 289/338 (85.50%), Query Frame = 1
Query: 1 MKRSRTCLNLFELDTPAAPKRTCSLPSNLGSFSSXXXXXXXXXXXXXXXFSVSVRQNQERLLFLQQHAASTLAQGTAAAPATIADGKFVVESIVRSQGSLNEITIHEGQQFIGQESNEAATAVPQQQSFAARVQXXXXXXXXXXXXPLSLFGGAVIGSLFEDGGESSDYFCGVDSSDEADEDSTVMAASAAAECAISTTCDSXXXXXXXXXXXXXXXXXXXXXXXXXXSSSSSCXXXXXXXXXXXXXXXXXXVIGGVGAERYAFEGDDDGIIGTAADPFVDLDTAPAAGLSFSLPAAHRWGXXXXXXXXXXXXXQPLVAATGPHAGGSWQPAAAGAPR 1014
MKRSRTCLNLFELDTPAAPKRTCSLPSNLGSFSS FS+SVRQNQERLLFLQQHAASTLAQGTAAAPATIADG FVVESIVRSQ SLNEITIHEGQQFIGQESNEAATAVPQQQS AA XXXXXXXXXXXXPLSLFGGAVIGSLFEDGG+SSDYFCGVDSSDEADEDSTV+AASAAAECAISTTCDSXXXXXXXXXXXXXXXXXXXXXXXXXXSSSSSC IGG GAERYAFEGDDD IIG AADPFVDLDTA AAGLSFSLPAAH XXXXXXXXXXX QPLVAATGPHAGGSWQPAAAGAPR
Sbjct: 1 MKRSRTCLNLFELDTPAAPKRTCSLPSNLGSFSSSSISSSSS-------FSLSVRQNQERLLFLQQHAASTLAQGTAAAPATIADGAFVVESIVRSQRSLNEITIHEGQQFIGQESNEAATAVPQQQSLAAXXXXXXXXXXXXXXXPLSLFGGAVIGSLFEDGGDSSDYFCGVDSSDEADEDSTVIAASAAAECAISTTCDSXXXXXXXXXXXXXXXXXXXXXXXXXXSSSSSCSSASGSG-----------AIGGFGAERYAFEGDDDSIIGIAADPFVDLDTAAAAGLSFSLPAAHXXXXXXXXXXXXXXPPQPLVAATGPHAGGSWQPAAAGAPR 320
BLAST of Ec-00_007150.1 vs. uniprot
Match: D7G3W2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3W2_ECTSI) HSP 1 Score: 58.2 bits (139), Expect = 1.810e-7 Identity = 26/26 (100.00%), Postives = 26/26 (100.00%), Query Frame = 2
Query: 947 RWWRRPARTPAARGSRQRRGRLGRWE 1024
RWWRRPARTPAARGSRQRRGRLGRWE
Sbjct: 47 RWWRRPARTPAARGSRQRRGRLGRWE 72
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Length | 1131 |
Hectar predicted targeting category | other localisation |
Gene id | Ec-00_007150.1 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ec-00_007150.1 ID=Ec-00_007150.1|Name=Ec-00_007150.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=377bp MKRSRTCLNLFELDTPAAPKRTCSLPSNLGSFSSSSSSSSSCGSSSGSSF SVSVRQNQERLLFLQQHAASTLAQGTAAAPATIADGKFVVESIVRSQGSL NEITIHEGQQFIGQESNEAATAVPQQQSFAARVQSSEQQQQQQQQQPLSL FGGAVIGSLFEDGGESSDYFCGVDSSDEADEDSTVMAASAAAECAISTTC DSSRGAECARQVSDADDNNASCARHVSDSSSSSCSSISNGSSGSGSSGGG SGVIGGVGAERYAFEGDDDGIIGTAADPFVDLDTAPAAGLSFSLPAAHRW GGGGGGGGGVVVPPQPLVAATGPHAGGSWQPAAAGAPREVGVRDGLLGRG RVCFPLSVVRRAVMKPTQRAKSAPSQ* back to topspliced messenger RNA >Ec-00_007150.1 ID=Ec-00_007150.1|Name=Ec-00_007150.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1131bp|location=Sequence derived from alignment at chr_00:11241264..11249069- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.
ATGAAGCGGAGCAGAACATGCCTGAACTTGTTCGAGCTCGACACGCCGGC GGCGCCCAAGCGGACATGCTCCTTGCCGAGCAATCTGGGGAGCTTCAGCA GCAGCAGCAGCAGCAGCAGCAGCTGCGGCAGCAGCAGCGGCAGTAGTTTT AGCGTCAGCGTCAGACAGAACCAGGAGAGGTTGCTGTTTTTGCAGCAACA CGCGGCGTCGACGCTGGCTCAAGGGACAGCAGCCGCCCCCGCGACCATCG CCGACGGAAAATTTGTGGTGGAGAGCATCGTGCGCTCGCAGGGGTCTCTC AACGAGATCACCATCCACGAGGGGCAGCAGTTCATCGGGCAGGAGAGCAA CGAGGCCGCTACGGCCGTACCGCAACAACAATCTTTCGCCGCCCGTGTTC AATCCTCCGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCCCTCTCCCTG TTTGGCGGGGCTGTGATTGGGAGCCTGTTCGAAGACGGCGGTGAATCGAG CGACTACTTCTGTGGGGTGGACTCGTCAGACGAAGCCGACGAGGACAGCA CGGTCATGGCCGCTTCGGCAGCGGCAGAATGCGCCATATCAACGACATGC GACAGCAGCCGCGGAGCCGAGTGTGCACGGCAAGTGTCAGACGCCGACGA CAACAACGCCTCCTGCGCCAGGCACGTCTCCGACTCTAGCAGCAGCAGTT GCAGCAGCATCAGCAATGGCAGCAGCGGCAGTGGCAGCAGCGGCGGCGGC AGCGGCGTCATCGGAGGTGTCGGCGCCGAAAGGTATGCCTTTGAGGGCGA CGATGACGGCATCATCGGCACCGCCGCCGACCCCTTCGTCGACCTCGACA CCGCCCCCGCCGCGGGCCTCTCGTTCTCGCTCCCGGCGGCGCATCGTTGG GGCGGCGGCGGCGGCGGCGGCGGTGGCGTTGTTGTGCCGCCTCAGCCGCT GGTGGCGGCGACCGGCCCGCACGCCGGCGGCTCGTGGCAGCCGGCAGCGG CGGGGGCGCCTAGGGAGGTGGGAGTAAGGGACGGCCTGCTGGGAAGGGGA AGGGTATGTTTTCCGCTCTCCGTTGTGCGAAGAGCAGTAATGAAGCCAAC GCAGCGAGCAAAGTCAGCCCCATCGCAGTGA back to topprotein sequence of Ec-00_007150.1 >Ec-00_007150.1 ID=Ec-00_007150.1|Name=Ec-00_007150.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=377bp
MKRSRTCLNLFELDTPAAPKRTCSLPSNLGSFSSSSSSSSSCGSSSGSSF SVSVRQNQERLLFLQQHAASTLAQGTAAAPATIADGKFVVESIVRSQGSL NEITIHEGQQFIGQESNEAATAVPQQQSFAARVQSSEQQQQQQQQQPLSL FGGAVIGSLFEDGGESSDYFCGVDSSDEADEDSTVMAASAAAECAISTTC DSSRGAECARQVSDADDNNASCARHVSDSSSSSCSSISNGSSGSGSSGGG SGVIGGVGAERYAFEGDDDGIIGTAADPFVDLDTAPAAGLSFSLPAAHRW GGGGGGGGGVVVPPQPLVAATGPHAGGSWQPAAAGAPREVGVRDGLLGRG RVCFPLSVVRRAVMKPTQRAKSAPSQ* back to topmRNA from alignment at chr_00:11241264..11249069- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Ec-00_007150.1 ID=Ec-00_007150.1|Name=Ec-00_007150.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=7806bp|location=Sequence derived from alignment at chr_00:11241264..11249069- (Ectocarpus species7 Ec32 male_plus_femaleSDR) ATGAAGCGGAGCAGAACATGCCTGAACTTGTTCGAGCTCGACACGCCGGC
GGCGCCCAAGCGGACATGCTCCTTGCCGAGCAATCTGGGGAGCTTCAGCA
GCAGCAGCAGCAGCAGCAGCAGCTGCGGCAGCAGCAGCGGCAGTAGTTTT
AGCGTCAGCGTCAGACAGAACCAGGAGAGGTTGCTGTTTTTGCAGCAACA
CGCGGCGTCGACGCTGGCTCAAGGTGCGTGAGCCTTGCGAGGGGTGGCTG
CTGTCTACCGCCGACCTCGCTTTGTGCATGTGGGGTTGTCGAAGCTGTCT
AGCGCGTTGACTTGTGTGCGCCCTTCCCCCCTCTTGTTACGAGAGCCACT
GAGTAGGATCTCTCCGCGACGCGCGCTTCGAGTTGATGCACATCCGTCTT
TGTGATGATGGCTGCATGTACATGCTGAGCGAAACAGGGCCTACAGCGCC
CCCCCCCCCCACGGCAGATGTCGGCGAGGAAGGAGCCGCGGTTCGGCGTT
CCGCTTGTTGGGGCGTCGGGGGGGGGCGCTCGGCCCTGGCGTGCTCTCTG
TTTTGTGGGCCGGGGTGAAGTTGCCTGTGTGTCGTAGCCCGGCCGGCCGG
CCCCACTTTCGTCAGTTTTGAAAAAAAATGGAATGCATATGCATAGAGCC
TGCACACACAAACCCTCTTCCTGCGTTGATGACCGCAGGGACAGCAGCCG
CCCCCGCGACCATCGCCGACGGAAAATTTGTGGTGGAGAGCATCGTGCGC
TCGCAGGGGTCTCTCAACGAGATCACCATCCACGAGGGGCAGCAGTTCAT
CGGGCAGGAGAGCAACGAGGCCGCTACGGCCGTACCGCAACAACAATCTT
TCGCCGCCCGTGTTCAATCCTCCGAGCAGCAGCAGCAGCAGCAGCAGCAG
CAGCCCCTCTCCCTGTTTGGCGGGGCTGTGATTGGGAGCCTGTTCGAAGA
CGGCGGTGAATCGAGCGACTACTTCTGTGGGGTGAGTCAACGCTGCTTGT
TTGCATCCGGGCCGTCCCTGCCGTCGCGTTTCTCTGCCGTAGTATGCGCT
GTTGTAAACCGCAAACTTCAACGAAAAGTTGAAAACCGGTTAATCTGGAA
TCGTTCTTCTCTTCCTTCTTCCGCTGGGTATCCACTCTCAACCACAGTGT
TTTTCGACTCAGCGCACGAACATGCGAGTGCTGCTTCTAGAACTTATCGT
AGAACTGGAGAGGGAGCGTGATCTCCCATCACATATAGATAAAAACGCTG
GAGGCTGTTGTTGTTCGGCCGGTATGTTTCCAACGCCTACCTAAAATGTG
CACGGCGACACAGGCGTTGCAGCGTTTCCTACTAGACTACATGCAACGCC
GTTAGCCTTTGAATCACATATTCGCGAGAAATCCGGTATGACCCCGACAC
ACGTGCGTGCGTGTACATAGCCCTCCGGCTCGGTGAAGAAAAATCAGAAG
TCTTTCGTTTCCCTCCGCTGCCGCTGCGGCACGTTCGATTTCCGCACGTC
TTTTTACACAAGGCCAACACTGATTTTTGTTTGTTCTTTGGAAGTTATCG
TTGGGGTCTTGTGGCCGCCCGCCCCCCCTCCCCGCTCTCCGGTGTGGCCA
TCACCGACGTGACCCACTTCGCTCTTTCAAGGCGCGAGATGCACATGTCG
CGTGTGTGCGTTGCGGCTTGCATGGTGGTGGTATCCTGGCACTCGAAGAC
AACAACGTATGCATGCAGACAGCAAAAGTATGCTGGTATGTATATTGTAT
AGTGTTTCGGTACGTGTTCATTTCGTTCGAAAGTGAGCGATGAGCGGCTT
CGGGGTGACGTCAAACATGCGCACAGACCCCCTCCCTTACCTCCCTTACG
AGAAGTTGGAGATTTAGGAATGTTTCGTTCGTGTGCCTTATCTTGTCAAG
CTTCCCCTCCGTTATGTGGGGTCGGGGGGTTGTGTTGACTTATAGTATAC
ATCCCTGCCTTCCTTACCCTCTGCGGTGGGGACACATCCAATAAATATCC
GCAAGCCGTGCCCTACTCAAAAGTCACACCAGTTTGATACAGCTCGATGA
GTTGAGAACCGAAGGGAACCTTCAAGATGCATGCACGTTTTGCACTCTTA
ATGTGAAGACAACTACAACCGTTGAGCGTTTGCCACAAATCTGCGGCCAG
CAGCATGATGGTTGAGAGAACGGCGGTGGAGAGGGGAGTGAGCGGGCGGA
TGTGAACGGAATTTGAAGAAGCGATGAACAAATCCAAGTAAACTGGTTGC
ACATGATGAACACATGCCTACATGTCACCCGACAAATTGCGGCGAGAGTC
CTCTCATGTTTAGAAAGATGGATGGGAGGCCACGACAGACAAAGCGCAGG
CACAGACGCATGCTCGTAAACGTGTAATGTGCACAGCAGTGGGGGTACAT
ATTTTCCGCACGAAAGTTTCGACGGTCCCGTAACTGCTTCAACATATGCC
CGAGAAAAATGTGCCGTACTACGCAGCTGCCGTTTGGTGCACGAAACGCG
CTGTACAAGTACACGGCAAGGAGAGGGACAACAGCACCAGTCCTTGCAAG
CATGGTTGGGCGTATCGGCATGATTGTCTACATGAAACTAGCCACGTACC
TACTGGTGGTAGATTTCGCGGTGGTTGTGTTTTGCGGCACGCTGGTGTGC
GGTGACTCACTCTCTGCCGCTGCGGTGGTGTCTACATAGTACGTCAAAAT
GTCGATGGGTCGTTGTTGAAGCCGCAAAAACGAAAAAACAAAGTGCCGTG
CGTGCATGCGTGTTTGCGTTACAACGCGGCACGCAGTATTTGGCAGATGA
CGCCGACGTGATGGCTTGAGCCACACGATGCTATGTACAACATGTACGAT
GATGCATTCATCGTGCAGATGCCAATCGAGGAGGCAGATTGCTTGGACGA
AGTTGTTCGTTTCCCCGTTCGGAGTTCGACTTCCATCTCCAATTTTCTCA
AATCAAGAGGCAAAGCACCCGCACTTCCACGAGCTCCTACTTTTGCCTAT
GGAGGCTCATTTCACGTATTCTGTGAGGGATATTGTAGGTATCCCAACCG
TTGAAGGTGTTATTCTACGGTTGTTGAATGAGCACCTGTTGTCGTGGTCA
ATTTTTTTTGTTGGTATTTTTTTGTTTTGGCTCACGCTCCCAACTGCCAC
TGTCTCAAGTGATGGCGCGTGCTTCAGTCGACACACCAGGGTTAATTATC
CCTGGAATGAAACGCGACTCTGCCGGTTGTGCATCCGTAACTTTTAATCA
GCCTGACATGAGCCTCGTTCACTGGTCGATGGCCACCTCCCTGTCGTGCC
ACAACAACCCCGGGGTTTGCACCCCGCCGCGGCTACTTTTGTTGCGATCG
GACCGTGGTTTTCGGAAATGTCCCTTGGCCTGACAGGAAATGGGACCTTC
CCATGGGCCAGTTTCTCCGCCACACATTTGCCGCACTCGCCCATATGCAC
ACTGGCTTACCATGACACTAGCCCCGAAAAAGTATCGATCAGTCAGCAAG
AGGACTTTGGCTTCCAGAGGCCTCCGCCCCAGCAGCGCTGTTGTGTGTGT
TGCCGCTGCCAAATTGAGAGCGTTGGACCACTCTTGACTGACGCAACCAA
GTCTACCACCGCAGCTTTGCCCACCTTTCACTCGCCTGTTGTCATGATAA
TTCGTTTGACGAATCACAGCAGATGTGCGAGAGTTCTCGGAACACAACCC
AAGGTTTCGTGCGTCGGGTCTGATTTTTCTCGTCTGTATCCGCTGACCCA
AGTTTGTGTCTTTCGGTATGCATCGCACTACAGGTGGACTCGTCAGACGA
AGCCGACGAGGACAGCACGGTCATGGCCGCTTCGGCAGCGGCAGAATGCG
CCATATCAACGACATGCGACAGCAGCCGCGGAGCCGAGTGTGCACGGCAA
GTGTCAGACGCCGACGACAACAACGCCTCCTGCGCCAGGCACGTCTCCGA
CTCTAGCAGCAGCAGTTGCAGCAGCATCAGCAATGGCAGCAGCGGCAGTG
GCAGCAGCGGCGGCGGCAGCGGCGTCATCGGAGGTGTCGGCGCCGAAAGG
TATGCCTTTGAGGGCGACGATGACGGCATCATCGGCACCGCCGCCGACCC
CTTCGTCGACCTCGACACCGCCCCCGCCGCGGGCCTCTCGTTCTCGCTCC
CGGCGGCGCATCGTTGGGGCGGCGGCGGCGGCGGCGGCGGTGGCGTTGTT
GTGCCGCCTCAGCCGCTGGTGGCGGCGACCGGCCCGCACGCCGGCGGCTC
GTGGCAGCCGGCAGCGGCGGGGGCGCCTAGGGTAAGCGTTAGGATTAGCG
GCGGCGGCGGCGGCGGCGGCGGTGGTGTGGGCATGAGTAGGGAGCGATGC
ATGACGGTGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNGCCGTAAAGTAGATGGTGACGAGAAGTAGGGGAGCGATA
CAGACAGACTAAATCGAGCATTTTAGAGAGAGCTGTATGAGTATTGGCGC
GCTCCCAGTATGGGCGAGTTGGTCGCTCCCTGTCCGAATGCTCGTGGCAG
CCAATTTTTTTCTTTTTTCTTCTCTTTTTTTCGGACCAGGAGGTGGGAGT
AAGGGACGGCCTGCTGGGAAGGGGAAGGGTATGTTTTCCGCTCTCCGTTG
TGCGAAGAGCAGTAATGAAGCCAACGCAGCGAGCAAAGTCAGCCCCATCG
CAGTGA back to topCoding sequence (CDS) from alignment at chr_00:11241264..11249069- >Ec-00_007150.1 ID=Ec-00_007150.1|Name=Ec-00_007150.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1131bp|location=Sequence derived from alignment at chr_00:11241264..11249069- (Ectocarpus species7 Ec32 male_plus_femaleSDR) ATGAAGCGGAGCAGAACATGCCTGAACTTGTTCGAGCTCGACACGCCGGC GGCGCCCAAGCGGACATGCTCCTTGCCGAGCAATCTGGGGAGCTTCAGCA GCAGCAGCAGCAGCAGCAGCAGCTGCGGCAGCAGCAGCGGCAGTAGTTTT AGCGTCAGCGTCAGACAGAACCAGGAGAGGTTGCTGTTTTTGCAGCAACA CGCGGCGTCGACGCTGGCTCAAGGGACAGCAGCCGCCCCCGCGACCATCG CCGACGGAAAATTTGTGGTGGAGAGCATCGTGCGCTCGCAGGGGTCTCTC AACGAGATCACCATCCACGAGGGGCAGCAGTTCATCGGGCAGGAGAGCAA CGAGGCCGCTACGGCCGTACCGCAACAACAATCTTTCGCCGCCCGTGTTC AATCCTCCGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCCCTCTCCCTG TTTGGCGGGGCTGTGATTGGGAGCCTGTTCGAAGACGGCGGTGAATCGAG CGACTACTTCTGTGGGGTGGACTCGTCAGACGAAGCCGACGAGGACAGCA CGGTCATGGCCGCTTCGGCAGCGGCAGAATGCGCCATATCAACGACATGC GACAGCAGCCGCGGAGCCGAGTGTGCACGGCAAGTGTCAGACGCCGACGA CAACAACGCCTCCTGCGCCAGGCACGTCTCCGACTCTAGCAGCAGCAGTT GCAGCAGCATCAGCAATGGCAGCAGCGGCAGTGGCAGCAGCGGCGGCGGC AGCGGCGTCATCGGAGGTGTCGGCGCCGAAAGGTATGCCTTTGAGGGCGA CGATGACGGCATCATCGGCACCGCCGCCGACCCCTTCGTCGACCTCGACA CCGCCCCCGCCGCGGGCCTCTCGTTCTCGCTCCCGGCGGCGCATCGTTGG GGCGGCGGCGGCGGCGGCGGCGGTGGCGTTGTTGTGCCGCCTCAGCCGCT GGTGGCGGCGACCGGCCCGCACGCCGGCGGCTCGTGGCAGCCGGCAGCGG CGGGGGCGCCTAGGGAGGTGGGAGTAAGGGACGGCCTGCTGGGAAGGGGA AGGGTATGTTTTCCGCTCTCCGTTGTGCGAAGAGCAGTAATGAAGCCAAC GCAGCGAGCAAAGTCAGCCCCATCGCAGTGA back to top
Synonyms
The feature 'Ec-00_007150.1' has the following synonyms
Synonym |
Esi0534_0005 |
Esi_0534_0005 |
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