Ec-00_007110.3 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_007110.3
Unique NameEc-00_007110.3
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length410
Homology
[Close]
BLAST of Ec-00_007110.3 vs. uniprot
Match: D7G3U7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3U7_ECTSI)

HSP 1 Score: 525 bits (1352), Expect = 8.070e-175
Identity = 302/358 (84.36%), Postives = 308/358 (86.03%), Query Frame = 3 
Query:   30 CCAQ-IRIADNDCSVTGEAPCIVTSPTPAPATPAPTPELSMCDGGIVGIQTSDVCCSASCGSCGGTGCSGRDGGSGACCGGGVRASGRYCSVTGEAPCMTGPAPTPXXXXXXXXXXTVEVPMCDGGIVGIQTSDVCCSASCGSCGGTGCSSRDGGSGACCGGGVRASGRYCSVTGEAPCMTGAAPTPEXXXXXXXXXTVEVPMCDGGIVGIQTSDVCCSTSCGSCGGTGCSGRDGGSGACCGGGVRASGRYCSVTGEAPCMTGSAPTPVXXXXXXXXXTVEVPKCDGGIVGIQASDVCCSLSCESCGGSGCSGRDGGEDECCGGGVRASGRDCSVTGEAPCIVTSP-----APTPAPS 1085
            CC   +R +   CSVTGEAPC+                + MCDGGIVGIQ SDVCCSASCGSC GTGCSGRDGGSGACCGGGV+ASGRYCSVTGEAPCMTGPAPTPXXXXXXXXXXTVEVPMCDGGIVGIQTSDVCCSASCGSCGGTGCSSRDGGSGACCGGGVRASGRYCSVTGEAPCMTGAAPTPEXXXXXXXXXTVEVPMCDGGIVGIQTSDVCCSTSCGSCGGTGCSGRDGGSGACCGGGVRASGRYCSVTGEAPCMT                   VPKCDGGIVGIQASDVCCSLSCESCGGSGCSGRDGGEDECCGGGVRASGRDCSVTGEAPCIVTSP     APTPAP+
Sbjct:   82 CCGGGVRASGRYCSVTGEAPCMT---------------VPMCDGGIVGIQASDVCCSASCGSCAGTGCSGRDGGSGACCGGGVQASGRYCSVTGEAPCMTGPAPTPXXXXXXXXXXTVEVPMCDGGIVGIQTSDVCCSASCGSCGGTGCSSRDGGSGACCGGGVRASGRYCSVTGEAPCMTGAAPTPEXXXXXXXXXTVEVPMCDGGIVGIQTSDVCCSTSCGSCGGTGCSGRDGGSGACCGGGVRASGRYCSVTGEAPCMT-------------------VPKCDGGIVGIQASDVCCSLSCESCGGSGCSGRDGGEDECCGGGVRASGRDCSVTGEAPCIVTSPEPSTPAPTPAPT 405
[Close]
BLAST of Ec-00_007110.3 vs. uniprot
Match: A0A6H5JTV1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTV1_9PHAE)

HSP 1 Score: 491 bits (1264), Expect = 1.710e-160
Identity = 280/345 (81.16%), Postives = 306/345 (88.70%), Query Frame = 3 
Query:   30 CCAQ-IRIADNDCSVTGEAPCIVTSPTPAPATPAPTPELSMCDGGIVGIQTSDVCCSASCGSCGGTGCSGRDGGSGACCGGGVRASGRYCSVTGEAPCMTGPAPTPXXXXXXXXXXTVEVPMCDGGIVGIQTSDVCCSASCGSCGGTGCSSRDGGSGACCGGGVRASGRYCSVTGEAPCMTGAAPTPEXXXXXXXXXTVEVPMCDGGIVGIQTSDVCCSTSCGSCGGTGCSGRDGGSGACCGGGVRASGRYCSVTGEAPCMTGSAPTPVXXXXXXXXXTVEVPKCDGGIVGIQASDVCCSLSCESCGGSGCSGRDGGEDECCGGGVRASGRDCSVTGEAPCIVTS 1061
            CC   +R +   CS+TGEAPC+                + MCDG IVGIQ+SDVCCSASCGSCGG+GC+ RDGGS +CCGGGVRASGRYCS+TGEAPCMTGPAPTP XXXXXXXXXTVEVPMCDG IVGIQ+SDVCCSASCGSCGG+GC+ RDGGS +CCGGGVRASGRYCS+TGEAPCMTG APTP+XXXXXXXXXTVEVPMCDG IVGIQ+SDVCCS SCG+CGG+GC+GRDGGS +CCGGGVRASGRYCS+TGEAPCMTG+APTP XXXXXXXXXTVEVPKCDGGIVGIQASDVCCSLSC SCGGSGC+GRDGG + CCGGGVRASGRDCSVTGEAPC+VTS
Sbjct:   38 CCGGGVRASGRYCSITGEAPCMT---------------VPMCDGDIVGIQSSDVCCSASCGSCGGSGCTERDGGSESCCGGGVRASGRYCSITGEAPCMTGPAPTPDXXXXXXXXXTVEVPMCDGDIVGIQSSDVCCSASCGSCGGSGCTERDGGSESCCGGGVRASGRYCSITGEAPCMTGPAPTPDXXXXXXXXXTVEVPMCDGDIVGIQSSDVCCSASCGTCGGSGCTGRDGGSESCCGGGVRASGRYCSITGEAPCMTGAAPTPAXXXXXXXXXTVEVPKCDGGIVGIQASDVCCSLSCGSCGGSGCTGRDGGSESCCGGGVRASGRDCSVTGEAPCVVTS 367
[Close]
BLAST of Ec-00_007110.3 vs. uniprot
Match: A0A6H5JWJ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWJ0_9PHAE)

HSP 1 Score: 484 bits (1247), Expect = 3.470e-160
Identity = 286/365 (78.36%), Postives = 304/365 (83.29%), Query Frame = 3 
Query:   30 CCAQ-IRIADNDCSVTGEAPCIV-TSPTPAPATPA------------------PTPELSMCDGGIVGIQTSDVCCSASCGSCGGTGCSGRDGGSGACCGGGVRASGRYCSVTGEAPCMTGPAPTPXXXXXXXXXXTVEVPMCDGGIVGIQTSDVCCSASCGSCGGTGCSSRDGGSGACCGGGVRASGRYCSVTGEAPCMTGAAPTPEXXXXXXXXXTVEVPMCDGGIVGIQTSDVCCSTSCGSCGGTGCSGRDGGSGACCGGGVRASGRYCSVTGEAPCMTGSAPTPVXXXXXXXXXTVEVPKCDGGIVGIQASDVCCSLSCESCGGSGCSGRDGGEDECCGGGVRASGRDCSVTGEAPCIVTSP 1064
            CC   +  +   CSVTGEAPCI   +PTPAP+ P                   P  E+ MCDGGIVGIQ  +VCCSASCGSCGG GCSGRDGGS ACCGGGV ASGR C+VTGEAPC+TGPAPTP XXXXXXXXXTVEVPMCDGGIVGIQ  +VCCSASCGSCGG GCS RDGGS ACCGGGV ASGR C+VTGEAPC+TG APTPEXXXXXXXXXTVE PMCDGGI+GIQTSDVCCS SCGSC G+GCSGRDGG  ACCGGGVRASGR+CSVTGEAPC+TG APTP XXXXXXXXXT+EVP+CDGGIVGIQASDVCCSLSC SCGGSGCSGRDGG D CCGGGVRASGR CSVTGEAPC+VT P
Sbjct:  175 CCGGGVTASGRLCSVTGEAPCITGPAPTPAPSPPXTVEGPAPTLEPXXXXXXPPAGEVPMCDGGIVGIQAKEVCCSASCGSCGGVGCSGRDGGSDACCGGGVTASGRLCAVTGEAPCITGPAPTPEXXXXXXXXXTVEVPMCDGGIVGIQAKEVCCSASCGSCGGVGCSGRDGGSDACCGGGVTASGRLCAVTGEAPCITGPAPTPEXXXXXXXXXTVEAPMCDGGIIGIQTSDVCCSASCGSCXGSGCSGRDGGPDACCGGGVRASGRFCSVTGEAPCITGPAPTPXXXXXXXXXXTIEVPECDGGIVGIQASDVCCSLSCGSCGGSGCSGRDGGSDACCGGGVRASGRFCSVTGEAPCLVTVP 539
[Close]
BLAST of Ec-00_007110.3 vs. uniprot
Match: D7G4E0_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4E0_ECTSI)

HSP 1 Score: 474 bits (1220), Expect = 4.640e-150
Identity = 273/314 (86.94%), Postives = 290/314 (92.36%), Query Frame = 3 
Query:  138 ELSMCDGGIVGIQTSDVCCSASCGSCGGTGCSGRDGGSGACCGGGVRASGRYCSVTGEAPCMTGPAPTPXXXXXXXXXXTVEVPMCDGGIVGIQTSDVCCSASCGSCGGTGCSSRDGGSGACCGGGVRASGRYCSVTGEAPCMTGAAPTPEXXXXXXXXXTVEVPMCDGGIVGIQTSDVCCSTSCGSCGGTGCSGRDGGSGACCGGGVRASGRYCSVTGEAPCMTGSAPTPVXXXXXXXXXTVEVPKCDGGIVGIQASDVCCSLSCESCGGSGCSGRDGGEDECCGGGVRASGRDCSVTGEAPCIVTSPAPTPA 1079
            E+SMCDGGIVGIQ+SDVCCSASCGSCGG+GCS RDGGS +CCGGGVRASGRYCSVTGEAPCMT PAPT XXXXXXXXXX  E+PMCDGGIVGIQTSDVCCSASCGSCGG+GC+ RDGGS +CCGGGVRASGRYCS+TGEAPCMTG APTP XXXXXXXXXTVEVPMCDGGIVGIQ+SDVCCS SCGSCGG+GC+GRDGGS +CCGGGVRASGRYCS+TGEAPCMTG APTP XXXXXXXXXTVEVP CDGGIVGIQ+SDVCCS SC SCGGSGCSGRDGG + CCGGGVR SGR CSVTGEAPC+ T  APTPA
Sbjct:   73 EVSMCDGGIVGIQSSDVCCSASCGSCGGSGCSSRDGGSESCCGGGVRASGRYCSVTGEAPCMTSPAPTXXXXXXXXXXXXXEIPMCDGGIVGIQTSDVCCSASCGSCGGSGCTGRDGGSESCCGGGVRASGRYCSITGEAPCMTGPAPTPXXXXXXXXXXTVEVPMCDGGIVGIQSSDVCCSASCGSCGGSGCTGRDGGSESCCGGGVRASGRYCSITGEAPCMTGPAPTPXXXXXXXXXXTVEVPMCDGGIVGIQSSDVCCSASCGSCGGSGCSGRDGGSESCCGGGVRGSGRYCSVTGEAPCM-TGAAPTPA 385
[Close]
BLAST of Ec-00_007110.3 vs. uniprot
Match: D7G3T6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3T6_ECTSI)

HSP 1 Score: 355 bits (910), Expect = 1.470e-109
Identity = 206/255 (80.78%), Postives = 218/255 (85.49%), Query Frame = 3 
Query:  321 MTGPAPTPXXXXXXXXXXTVEVPMCDGGIVGIQTSDVCCSASCGSCGGTGCSSRDGGSGACCGGGVRASGRYCSVTGEAPCMTGAAPTPEXXXXXXXXXTVEVPMCDGGIVGIQTSDVCCSTSCGSCGGTGCSGRDGGSGACCGGGVRASGRYCSVTGEAPCMTGSAPTPVXXXXXXXXXTVEVPKCDGGIVGIQASDVCCSLSCESCGGSGCSGRDGGEDECCGGGVRASGRDCSVTGEAPCIVTSPAPTPAPS 1085
            MTGPAPTPXXXXXXXXXXT EVPMCDGGIVGIQ SD+CCS+SCGSCGGTGC+SRDGGS ACCGGGVRASGR+CSVTGEAPCMTG APTP XXXXXXXXXT EVPMCDGGIVGIQ SD+CCS+ CGSCGGTGC+ RDGGS ACCGGGVRASGRYCSVTGEAPCMT                  EVP CDGGIVGIQ SDVCCSLSC SCGG+GC+ RDGG + CCGGGVRASGRDCSVTGEAPC+VT PA TP P+
Sbjct:    1 MTGPAPTPXXXXXXXXXXTDEVPMCDGGIVGIQQSDICCSSSCGSCGGTGCTSRDGGSEACCGGGVRASGRFCSVTGEAPCMTGPAPTPXXXXXXXXXXTDEVPMCDGGIVGIQQSDICCSSRCGSCGGTGCTSRDGGSEACCGGGVRASGRYCSVTGEAPCMTN-----------------EVPMCDGGIVGIQQSDVCCSLSCGSCGGTGCTSRDGGSEACCGGGVRASGRDCSVTGEAPCVVTGPAFTPEPT 238
[Close]
BLAST of Ec-00_007110.3 vs. uniprot
Match: D7G5D5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5D5_ECTSI)

HSP 1 Score: 336 bits (862), Expect = 2.790e-106
Identity = 188/239 (78.66%), Postives = 199/239 (83.26%), Query Frame = 3 
Query:  381 EVPMCDGGIVGIQTSDVCCSASCGSCGGTGCSSRDGGSGACCGGGVRASGRYCSVTGEAPCMTGAAPTPEXXXXXXXXXTVEVPMCDGGIVGIQTSDVCCSTSCGSCGGTGCSGRDGGSGACCGGGVRASGRYCSVTGEAPCMTGSAPTPVXXXXXXXXXTVEVPKCDGGIVGIQASDVCCSLSCESCGGSGCSGRDGGEDECCGGGVRASGRDCSVTGEAPCIVTSPAPTPAPSTTVT 1097
            EV  CDGGIVGIQ SD+ CS+SCGSCGGTGC+SRDGGS ACCGGGVRASGRYCSVTGEAPCMTG APTPEXXXXXXXXXT EV MCDGGIVGIQ SD+CCS+SCGSCGGTGC+ RDGGS ACCGGGVRASGRYCSVTGEAPCMT                  EVP CDGGIVGIQ SDVCCSLSC SCGG+GC+ RDGG + CCGGGVRASGRDCSVTGEAPC+VT PA TP P+ T T
Sbjct:   60 EVETCDGGIVGIQQSDISCSSSCGSCGGTGCTSRDGGSEACCGGGVRASGRYCSVTGEAPCMTGPAPTPEXXXXXXXXXTDEVSMCDGGIVGIQQSDICCSSSCGSCGGTGCTSRDGGSEACCGGGVRASGRYCSVTGEAPCMTN-----------------EVPMCDGGIVGIQQSDVCCSLSCGSCGGTGCTSRDGGSEACCGGGVRASGRDCSVTGEAPCVVTGPAFTPEPTPTPT 281
[Close]
BLAST of Ec-00_007110.3 vs. uniprot
Match: A0A6H5K3Y1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Y1_9PHAE)

HSP 1 Score: 328 bits (842), Expect = 9.440e-102
Identity = 189/221 (85.52%), Postives = 197/221 (89.14%), Query Frame = 3 
Query:  147 MCDGGIVGIQTSDVCCSASCGSCGGTGCSGRDGGSGACCGGGVRASGRYCSVTGEAPCMTGPAPTPXXXXXXXXXXTVEVPMCDGGIVGIQTSDVCCSASCGSCGGTGCSSRDGGSGACCGGGVRASGRYCSVTGEAPCMTGAAPTPEXXXXXXXXXTVEVPMCDGGIVGIQTSDVCCSTSCGSCGGTGCSGRDGGSGACCGGGVRASGRYCSVTGEAPCM 809
            MC+GGI GIQ SDVCCS SCGSCGG+GCSGRDGGS ACCGGGVRASGR+CS+T EAPCMTGPAPTPXXXXXXXXXXTVEVPMCDG IVGIQ SDVCCSASCGSCGG+GCS RDGGS ACCGGGVRASGR+CSVTGEAPCMTG APT E  XXXXXXXTVEVPMCDGGIVGIQ SDVCCS SCGS     C+GRDGG  ACCGGGVRASG  CSVTGEAPC+
Sbjct:  179 MCEGGIAGIQASDVCCSVSCGSCGGSGCSGRDGGSDACCGGGVRASGRFCSITEEAPCMTGPAPTPXXXXXXXXXXTVEVPMCDGEIVGIQASDVCCSASCGSCGGSGCSGRDGGSDACCGGGVRASGRFCSVTGEAPCMTGPAPTTEPTXXXXXXXTVEVPMCDGGIVGIQASDVCCSASCGSXXXXXCTGRDGGPDACCGGGVRASGLLCSVTGEAPCL 399
[Close]
BLAST of Ec-00_007110.3 vs. uniprot
Match: A0A6H5JVC9_9PHAE (AMOP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVC9_9PHAE)

HSP 1 Score: 347 bits (891), Expect = 1.090e-101
Identity = 198/238 (83.19%), Postives = 213/238 (89.50%), Query Frame = 3 
Query:  381 EVPMCDGGIVGIQTSDVCCSASCGSCGGTGCSSRDGGSGACCGGGVRASGRYCSVTGEAPCMTGAAPTPEXXXXXXXXXTVE--VPMCDGGIVGIQTSDVCCSTSCGSCGGTGCSGRDGGSGACCGGGVRASGRYCSVTGEAPCMTGSAPTPVXXXXXXXXXTVEVPKCDGGIVGIQASDVCCSLSCESCGGSGCSGRDGGEDECCGGGVRASGRDCSVTGEAPCIVTSPAP-TPAPS 1085
            EVP CDGGIVGIQ+SDVCCS SCGSCGGTGC+ RDGG+ ACCGGGVR+SGR+CSVTGEAPC+TG APTPE  XXXXXXX  E  VPMCDGGIVGIQ+SDVCC++SCGSCGG+GC+GRDGG  ACCGGGVRASGRYCSVTGEAPCMTG APTP XXXXXXXXXT EVP CDGGIVGIQ+SDVCCSLSC SCGG+GC+ RDGG D CCGGGVRASGRDCSVTGEAPC+VTS  P TP PS
Sbjct:   49 EVPTCDGGIVGIQSSDVCCSLSCGSCGGTGCTGRDGGADACCGGGVRSSGRFCSVTGEAPCITGPAPTPEPTXXXXXXXXDEGAVPMCDGGIVGIQSSDVCCTSSCGSCGGSGCTGRDGGEDACCGGGVRASGRYCSVTGEAPCMTGPAPTPXXXXXXXXXXTEEVPMCDGGIVGIQSSDVCCSLSCGSCGGTGCTVRDGGADACCGGGVRASGRDCSVTGEAPCVVTSGVPPTPVPS 286
[Close]
BLAST of Ec-00_007110.3 vs. uniprot
Match: A0A6H5JVK3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVK3_9PHAE)

HSP 1 Score: 173 bits (439), Expect = 2.880e-47
Identity = 98/103 (95.15%), Postives = 100/103 (97.09%), Query Frame = 3 
Query:  147 MCDGGIVGIQTSDVCCSASCGSCGGTGCSGRDGGSGACCGGGVRASGRYCSVTGEAPCMTGPAPTPXXXXXXXXXXTVEVPMCDGGIVGIQTSDVCCSASCGS 455
            MCDGGIVGIQ SDVCCSASCGSCGG+GCSGRDGGS ACCGGGVRASGR+CSVTGEAPCMTGPAPTPXXXXXXXXXXTVEVPMCDGGIVGIQ SDVCCSASCGS
Sbjct:    1 MCDGGIVGIQASDVCCSASCGSCGGSGCSGRDGGSDACCGGGVRASGRFCSVTGEAPCMTGPAPTPXXXXXXXXXXTVEVPMCDGGIVGIQASDVCCSASCGS 103
[Close]
BLAST of Ec-00_007110.3 vs. uniprot
Match: A0A6H5JC43_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC43_9PHAE)

HSP 1 Score: 158 bits (400), Expect = 1.950e-38
Identity = 106/243 (43.62%), Postives = 130/243 (53.50%), Query Frame = 3 
Query:  150 CDGGIVGIQTSDV-CCSASCGSCGGTGCS------GRDGGSGACCGGGVRASGRYCSVTGEAPCMTGPAPTPXXXXXXXXXXTVEVPMCDGGIVGIQTSDV-CCSASCGSCGGTGCSSRDGGSG----ACCGGGVRASGRYCSVTGEAPCMTGAAPTPEXXXXXXXXXTVEVPMCDGGIVGIQTSDV-CCSTSCGSCGGTGC--SGRDGGSGA--CCGGGVRASGRYCSVTGEAPCMTGSAPT 827
            C  G+ GI  + V CC  +CG CGGTGC+      G DG S  CCGGGV+AS  YC  T EAPC+ G  PTP                C  G+ GI  + V CC   CG CGGTGC++    +G    +CCGG ++ASG+YC  T +APC+ G++P P                C  G+ GI  + V CC   CG CGG GC  SG   G GA  CCGG ++AS  YC  T EAPC+ GS PT
Sbjct:  193 CSNGLEGIDANGVVCCPLACGQCGGTGCNTSGAAFGLDGSS--CCGGGVKASDEYCDETNEAPCIIGSRPTPSP---------TSANTCSNGLEGIDGNGVVCCPLGCGQCGGTGCNTSGAAAGLDGSSCCGGSIKASGKYCDETNDAPCIIGSSPAPSPTPSET---------CSNGVEGIDGNGVVCCPLGCGQCGGAGCTTSGAAAGLGADSCCGGSIKASDEYCDETNEAPCIIGSRPT 415
The following BLAST results are available for this feature:
BLAST of Ec-00_007110.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3U7_ECTSI8.070e-17584.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JTV1_9PHAE1.710e-16081.16Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JWJ0_9PHAE3.470e-16078.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G4E0_ECTSI4.640e-15086.94N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepI... [more]
D7G3T6_ECTSI1.470e-10980.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G5D5_ECTSI2.790e-10678.66Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K3Y1_9PHAE9.440e-10285.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JVC9_9PHAE1.090e-10183.19AMOP domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JVK3_9PHAE2.880e-4795.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JC43_9PHAE1.950e-3843.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:11177957..11193056 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score190.3
Seed ortholog evalue1.8e-45
Seed eggNOG ortholog2880.D7FJ68
Preferred nameMTPAP
Length2354
KEGG koko:K08342,ko:K16462,ko:K17478,ko:K18060
KEGG Pathwayko04136,ko04138,ko04140,map04136,map04138,map04140
Hectar predicted targeting categoryother localisation
Gene idEc-00_007110.3
EggNOG free text desc.importin-alpha family protein binding
EggNOG OGsCOG0086@1,KOG0260@2759,KOG4725@1,KOG4725@2759
EC2.7.7.19
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002,ko01009,ko03029,ko03036,ko03110,ko04131,ko04812
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_007110Ec-00_007110Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 11169950..11193056 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_007110.3Ec-00_007110.3Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 11177984..11191959 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_007110.3.1Ec-00_007110.3.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 11177957..11178056 +
Ec-00_007110.3.2Ec-00_007110.3.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 11180804..11180845 +
Ec-00_007110.3.3Ec-00_007110.3.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 11181336..11181521 +
Ec-00_007110.3.4Ec-00_007110.3.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 11182841..11182897 +
Ec-00_007110.3.5Ec-00_007110.3.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 11183361..11183546 +
Ec-00_007110.3.6Ec-00_007110.3.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 11183909..11183965 +
Ec-00_007110.3.7Ec-00_007110.3.7Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 11184337..11184522 +
Ec-00_007110.3.8Ec-00_007110.3.8Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 11184980..11185036 +
Ec-00_007110.3.9Ec-00_007110.3.9Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 11185450..11185638 +
Ec-00_007110.3.10Ec-00_007110.3.10Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 11191763..11193056 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0071105UTR:Ec-00_007110.3Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_00 11177957..11177983 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_007110.3CDS:Ec-00_007110.3Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 11177984..11178056 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0071103UTR:Ec-00_007110.3Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_00 11191960..11193056 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_007110.3 ID=Ec-00_007110.3|Name=Ec-00_007110.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=410bp
MCCAQIRIADNDCSVTGEAPCIVTSPTPAPATPAPTPELSMCDGGIVGIQ
TSDVCCSASCGSCGGTGCSGRDGGSGACCGGGVRASGRYCSVTGEAPCMT
GPAPTPEPTPAPTPPPTVEVPMCDGGIVGIQTSDVCCSASCGSCGGTGCS
SRDGGSGACCGGGVRASGRYCSVTGEAPCMTGAAPTPEPTPAPTPPPTVE
VPMCDGGIVGIQTSDVCCSTSCGSCGGTGCSGRDGGSGACCGGGVRASGR
YCSVTGEAPCMTGSAPTPVPTPAPTPPPTVEVPKCDGGIVGIQASDVCCS
LSCESCGGSGCSGRDGGEDECCGGGVRASGRDCSVTGEAPCIVTSPAPTP
APSTTVTTTAPPTTVTTTAPPTMVTTTAPPTTVTTTAPPTMVTTTAPPTP
APVGGRGGR*
back to top

spliced messenger RNA

>Ec-00_007110.3 ID=Ec-00_007110.3|Name=Ec-00_007110.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=2354bp|location=Sequence derived from alignment at chr_00:11177957..11193056+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
TTCATTCCTGTATCACATGCCTGAACGATGTGCTGTGCCCAGATCAGGAT
CGCTGATAACGATTGCTCTGTTACGGGAGAAGCGCCTTGCATTGTGACGA
GCCCGACGCCGGCCCCTGCTACGCCGGCCCCTACCCCCGAACTGTCGATG
TGCGACGGCGGGATTGTCGGGATCCAGACGAGCGACGTATGCTGCTCCGC
AAGCTGCGGGTCTTGCGGAGGCACCGGGTGCTCTGGCAGGGACGGTGGCT
CAGGTGCCTGCTGTGGTGGCGGAGTCAGGGCCTCCGGTCGCTACTGCTCT
GTTACGGGAGAAGCACCTTGCATGACCGGCCCGGCCCCTACTCCGGAGCC
CACGCCGGCCCCTACGCCGCCCCCTACCGTTGAAGTTCCGATGTGCGACG
GAGGAATTGTCGGCATCCAGACGAGCGACGTATGCTGCTCCGCAAGCTGT
GGGTCTTGCGGAGGTACCGGGTGCTCTAGCAGGGACGGTGGCTCAGGTGC
CTGCTGTGGTGGCGGAGTCAGGGCCTCCGGTCGCTACTGCTCTGTTACGG
GAGAAGCACCTTGCATGACCGGCGCGGCCCCTACCCCTGAACCAACGCCG
GCCCCTACGCCGCCCCCTACTGTTGAAGTTCCTATGTGCGACGGCGGGAT
TGTCGGCATTCAGACGAGCGACGTATGCTGCTCCACAAGCTGCGGGTCTT
GCGGAGGTACCGGGTGCTCCGGCAGGGACGGTGGCTCAGGTGCCTGCTGT
GGTGGCGGAGTCAGGGCCTCCGGTCGCTACTGCTCTGTTACGGGAGAAGC
GCCCTGCATGACCGGGTCGGCCCCTACCCCGGTCCCTACGCCGGCCCCTA
CCCCGCCACCTACAGTTGAAGTCCCGAAGTGCGACGGCGGAATTGTCGGC
ATCCAGGCGAGCGATGTATGCTGCTCCTTGAGCTGTGAATCTTGCGGAGG
TTCCGGGTGCAGTGGCAGGGACGGTGGCGAAGACGAGTGCTGTGGTGGCG
GAGTGAGGGCGTCCGGTCGCGATTGCTCTGTTACGGGAGAAGCGCCTTGC
ATCGTGACGAGCCCCGCCCCTACCCCGGCCCCTTCGACTACGGTCACCAC
GACGGCCCCTCCGACCACGGTCACCACGACGGCCCCTCCTACGATGGTCA
CCACGACCGCTCCTCCTACGACGGTCACCACGACGGCCCCTCCTACGATG
GTCACCACGACCGCCCCTCCTACGCCGGCCCCTGTTGGTGGTCGTGGGGG
TCGTTGAGGCACTACGCCGGCCCCTACGGTTTAACATAATTGAAGTCATA
CGGTCAGTAGTGGTGCTCGGTTACGGCCTTAGGCCATTCAGTACAGGTTC
CTGGGGTCAACTATTCCTAAACCATTCTCCACTTACAACCTCCCCCCGGC
GGATACTCCTGGGCCATTGAAAAGGGATAAGTTGTTCAACCGTTTTTGGA
GGTTGTGCTCTGCGCATAGGCGGGTTATCGAGCAGGGTTGGTTGTGTTGA
TTCAAGGTGTACCCTCTCTTGGAGGTTGCGAACGATGTACGGCCGGATGT
TGCCAAAAGCATTAGTCGTTGGGGTTATATCTCGCATCATACGTTATAAG
ACCAGGTAACATGTTAGTGACTTTGATAGGATGAGTCGATTCGGTTGTCC
CTTTGGGTGTTTTAGTCCTGTCGTTTCCCAGCTTCATTCCAGGTTTTGAC
ATATCTAAATTAGTCGTATCACTTACCCCAGTACGTCAAAAGAGTTACTT
GTTGATGGCTGGAGACTCTCAATGTGGCAGAGACGAATGATTATTTGTCA
ACCTTGTGTTGAGTACGTTGAGTACAATATACGCACGAGACGTCTGTAGT
CGGATCTGGGCCAAGGCTTCTTGTCATCCGCTTGTTTTGACAAACTGCAA
CCCAAGTGTTGCCGTCGATATCTCTGTGCTTGCATGGTGCAGGCCTCATC
CGGCCACTTTGTCCTCCTTCTGGTCTAACCGACATAATAACTAATTTTAT
TTTTTTCTCTGGGTACTCGGTATAAGACGCGGCCGGCTTAATCTCTCACG
GAGGTAGATAACCACGAGCAGTGTATGCCGTGTCGCAACCCACCAAGCGG
CGAATCGCCGTCCTTCGAGGACATGTTGTGTCCGACTGAAAACTCCACGT
GACTCTTTTCGGCTCGCTCAGCAAGTCGACCGTACGGTTTTACTATCGCC
AAACATACCTAACTTCTAGCTCGGGTCTCTCCAGACTAAAGTCTTTTGTT
CTGTGTGTTATAGGGTATCCACTATGGATTGACGCGGAATTTTGACCTTT
GAGGATTGACGCCAACATAAAGTGACGGTTGAGGGTTTTGACGGGAAAAA
ATTC
back to top

protein sequence of Ec-00_007110.3

>Ec-00_007110.3 ID=Ec-00_007110.3|Name=Ec-00_007110.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=410bp
MCCAQIRIADNDCSVTGEAPCIVTSPTPAPATPAPTPELSMCDGGIVGIQ
TSDVCCSASCGSCGGTGCSGRDGGSGACCGGGVRASGRYCSVTGEAPCMT
GPAPTPEPTPAPTPPPTVEVPMCDGGIVGIQTSDVCCSASCGSCGGTGCS
SRDGGSGACCGGGVRASGRYCSVTGEAPCMTGAAPTPEPTPAPTPPPTVE
VPMCDGGIVGIQTSDVCCSTSCGSCGGTGCSGRDGGSGACCGGGVRASGR
YCSVTGEAPCMTGSAPTPVPTPAPTPPPTVEVPKCDGGIVGIQASDVCCS
LSCESCGGSGCSGRDGGEDECCGGGVRASGRDCSVTGEAPCIVTSPAPTP
APSTTVTTTAPPTTVTTTAPPTMVTTTAPPTTVTTTAPPTMVTTTAPPTP
APVGGRGGR*
back to top

mRNA from alignment at chr_00:11177957..11193056+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_007110.3 ID=Ec-00_007110.3|Name=Ec-00_007110.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=15100bp|location=Sequence derived from alignment at chr_00:11177957..11193056+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
TTCATTCCTGTATCACATGCCTGAACGATGTGCTGTGCCCAGATCAGGAT
CGCTGATAACGATTGCTCTGTTACGGGAGAAGCGCCTTGCATTGTGACGA
GTAAGCCGATTGGAATGAAGCATGTGGGAACGTCGAACAGACTCACACTC
TGATAACGTCTTTCAATGTGGTAGGGTATGGTGACATCTCTCTGGCCCTG
TCTCCGCAAATATGTGCCCTTGGCTTTCCCCACCGCCCTTGGAAAGGTAT
TTCGAACGCCTCATCTTGATATACTCCATTTTCGATAAACGTTTTGAATG
GAAGAAATTCAACATCTGGTATGAAACGGCCTTCGTGGCGAGTCCTAAGC
AGCTGCATCATACCTCTAGGCTCTCACCCACAAATTGTCAGAGCCCTACC
TGAAAGAAGTGTTGAGCTTAATGTCCGTTCCTCTACTCTAACGAATGTAT
TCCGTCAACGTCCAATTCCCACACGTGCTTGTCAAATATGACACCTATGT
ACGGACCCGTCCGCCGGCACGCAACAGGCCCGGCTCCTGCTACGCCGGCC
CCTGCTACGCTGGCCCCTACAAGTGAAGGTGTGGCTCTTGTCTGCCGCTT
GTCGCCATATTTTATGTCTTGGGCATCTATGTATCTCAGACCGTCTTGTG
TTTATGACTTGTGCCTTAATAGCGGCTGCTTGCAACCACGGCACATGTAT
GTGAACGTGCCTCGTTCTACAGGTGCGACCAAACTTGGGAATATGATACG
TCTTTATAATTTCCATGATACTTCGAATACTCTGTTGCGAAGACGTGAAC
TTTCTCTTTACGTTACGGAAAATACCGTCGTTACTCTGGAACTGTGTGTT
AACGCACATGGGTTCGCCACTGAAGATGAGAAATTCCGGACTACATGGCG
ACCTGCCCCCGCCCTTCACCCTGCTGTACCGTTTAGCGTGTCCTGTGAAG
GTCCTGTTGTCCTGCTATCACATGCCTGAACGATGTGCTTGGCATAGCAA
CATTGTTTTCTCGAAGTGACCGACCATTAATTTCTTAATTTCGCTTATCG
TTCAACCGCTCACTTCAACGTCAAATAGACGAGATGTGCGAGGGCGGAAT
TGTCGGAGTCCAGGCTCTTGACGTTTGTTGCGCCCTGAGCTGCGGTTCTT
GCGGAGGTGTCGGATGCAGTTCCAGGGACGGTGGAGAAGACAACTGCTGT
GGTGCCCAAATCAGGATCGCTGATAACGATTGCTCTGTTACGGGAGAAGC
ACCTTGCATTGTGACGAGTAAGCCGATTAGAATAAGGCTTGTGTGAACGT
CGAAGCGACAAACTCACACTCTTGATAACGTTTTGCGAAACGGTAGACTT
GCGTCGAATCTCTTGGGCATTACGCTGCAAAATATGTGCCCTTCTCTTCC
TAACCTACACCTGGTATGATAACTGGCCTTCGAGGCAAGTGTCCTAAGCA
ACTGACGCATCATACCTCCAGGCGCTCAACAACAAATTGCTACAGTAGAC
CCACCCGAATCAAGTCAAGTTGAACGCGTAACGTCCCTCTACTTAACGAA
TGTATTCGGTCCACAGTTCCTTTCCACATTTGCAATACTGCACAAACACG
GCACAATGTACGGACCTTATCGCCGACACGCTATAGGCCCGGTCCCCGCT
ACGCCGGCCCCTGCTACGCCGGCCCCTGTTACGTCGGCCTCTGCTACGCT
TGCCCCTACACGTGAAGGTGTGGTTCTTGTCTGCCAACACATTTCATGTC
TCGGGCATCGGACGTATTTAGACCGAAACACGTCTTTTCTGTTATGACTT
TATGTCTCAATGACGGCTGCTTGAAACCACGGCACATGCATGGGAACGTG
CCTTGTCCTGCAGTTGCGACCGGCATCTGAACTTGCGAACACGAAATATT
TTTTTCTTCCACGATACTCCGAATACTCTGTGGCAAAGACGGTAACTATT
TCTATACGGAAAATATATTGATTATTATGCGTTAATGCACATGAGTTCGT
CTCTGAAGATAAGAAATTCCGGACTACAAGTCGACGTGCCCCCGCCCTTC
ACACGACCAACCATTTAGCGTGTGAATGTCCTGTTCATCATATGTCTGAA
CGATGTGCTTGGCATTGCAAATTGTTTTGTTTCAAGGTTATCAACCACTA
ATGTCTTGATTTCGCCTATCGTTCAACCGCTCACGTCAACGTATATAACA
GCGGGGACTTGCGAGGGCGGAATTGTCGGCGTCCAGGCTCTTGATGTTTG
CTGCGCCCTGAGCTGCGATTCTTGCGGAGGTGTCGGGTGCAGTTCCAGGG
ACGGTGGAGAAGACAACTGCTGTGGTGCCCAAATCAGGATCGCTGATCGC
GATTGCTCTGTTACGGGAGAAGCGCCTTGCATTGTGACGAGTAAGCCGAT
TGGAATGAAGCATGTGGGAACGTCGAAGCGACAAACTCACACTCTGATAA
CGTTTTGCGAAACGGTAGACTTGCGTCGAATCTCCTGGGCCCTCAGCCGT
TTGCCCTTGCCTTCCCAACCGCGTTGGACAGGTAATTCGAACGCTTTATT
TATAATATACTCCATTTTCAATTCAAACGTACCGATAGAACGAGATTCAA
CATCTGGTATGAAACTAACCCTTACCCTCTGGTATGAAACGCCTTTCTAG
GCGAGTTCTAAGCAACTGAAGTATCATTCCTTTAGGCGCTCTTTACAAAC
TGTAGACCTCCATCCGAGACTATGACAGTCGAACGTTTAATTTCCGTCCC
TCTACTTCAACGAGAGTACTCCATCCACAGCTCTCTTCCACAATTAATTG
CAATACTTATGACACTTTTTACGGATCTGTCTTTCAACACGCAACAGGCC
CGACGCCGGCCCCTGCTACGCCGGCCCCTACCCCCGAACGTGAGGTTCTT
CGTTGCCGCCTGTTGCGATATACTAAAGCGATATACTAAATCATCTGCAT
CTCATGTATCGCAAAATGTGTGCTCATGTCTTCGGTAGACAAACGTTGTC
GGCCTGCAGCTGGGACTGGCACCTGATTTCCACAACAGTGTGACCTGATA
TTGCTTTTTCAATATGATGTCATAGAGCTTGTGTGGCGAAGACATGTCGT
CTGCGTCTCAATGAAATAGTGTCGTTAGGTTTAGGGTTAGGGTGAGCTGC
ATCCGCCGTCCACACCGTATGGTAAGGCTGTTTTGCGAATCTTATTATCT
CGTTTTGTCCCATAACCGATCGATGATAGCTCGATAAATATAGATATCCC
ACGCCGATGTCAGGTACCACGTAGTGCGCATCTTACATTGATGACGCGTT
GTGGGAATGCTTTCGCCTGAAGTCCTCGCGTATGTTGACCGCTGTGATAT
CAAACGGTGTCTTTATCCAAACCGAACAGTGTCGATGTGCGACGGCGGGA
TTGTCGGGATCCAGACGAGCGACGTATGCTGCTCCGCAAGCTGCGGGTCT
TGCGGAGGCACCGGGTGCTCTGGCAGGGACGGTGGCTCAGGTGCCTGCTG
TGGTGGCGGAGTCAGGGCCTCCGGTCGCTACTGCTCTGTTACGGGAGAAG
CACCTTGCATGACCGGTGAGCCTGTTGGAAGTGACCCAAGTTTGAACATC
AAAAGTGACGAACTAACACTGGGTAACGTTAGTCGGTCGTTCACAACGTT
GGGTCTGAAACTCTATATTGTAGCTATTTATGCTTGCTCCGATACGCTTC
CCCGATCTCGAAGAAGAAATTTTAGGCAATATGATGTTAGCAATTTACCT
TCAAAAACTGACCAAAGTTTATTACGGTGGGCAGGATTAACCCCAGTGAA
CCGTGAATCATGCATGTTATGCAGCTGCGATTCAGGCACATTAAGCTGTA
GCAGTGTCTGACCCCATCGAAAACAGGCAGCGCTATCCGAAGCCATATTT
CAGTTTTGTTTCGTCGACATGGTGTGTTGAATGTCAACGATACTACGAAC
GGGCGCTTGCTCCATTCGTGAAACAGGCGCGGCCCCTACTCCGGAACCTA
CACCGGCCCCTACGCCGCCCCCTACGGTTGAAGGTAAACGGTGGCCGTTG
CAGTGTTGCGCCATGAAACTTCAGCCTGTCTCCAGGACAAGATATCTCGT
CGACGTCGACCGCGTCCACCGCACATGACTCGATACTCTGTATATAGGTC
AGCATATACTTTCTACCAACACGTAATGGTGCTGTCGAAAGTGAGCTCTA
CCTGAAACAACTTCACCCACGATTACGCCAGGTCTCAGGTAGAGATTGAC
CAATGGATGACGTCTGGCCTTCTTTGTACTTGAAGTTATTCATGCAAGTG
AATAATGCGGCTGTGATTTTTTACGCCTGCATCCAAACCGAACAGTTCCG
ATGTGCGACGGAGGTATCGTCGGCATCCAGGCGAGCGACGTATGCTGCTC
GGCAAGCTGTGGGTCTTGCGCAGGCACCGGGTGCTCTGGTAGGGACGGTG
GCTCAGGTGCCTGCTGTGGTGGCGGAGTCCAGGCCTCCGGTCGCTACTGC
TCTGTTACGGGAGAAGCACCTTGCATGACCGGTGAGCCTGTAGGCACGAG
CGACGCAAGTGTGAATACCAAAAGTGACAAACTCACGTCAGGTTTTCTCA
TTCTCTACTTGGACGGCTAGGTAGGATTTACCTCAAGTGAACCATGCATG
TTCGTGCAGCTGCTTTATTATCTTTCATTACGCCCATGATGGGAAAGGAG
TGTCAGACTACATCGGAACACACACACATGAAGGCACCAGAGGGTCAGAC
CCCATCGGAAACAGGCAACGCTGCCGGAAGCCCAATTCAGCTTCTGTGCT
TCAAAATCGTGCGTTGAACGTCCTCTTCCTGTAACACTGTACCAACACTA
ATATCAACGGGCGCTTGCACCATTCGTGTAACAGGCCCGGCCCCTACTCC
GGAGCCCACGCCGGCCCCTACGCCGCCCCCTACCGTTGAAGGTAAGCGGT
GGTTGTTGGAGCCTTGGCGCCAAAACACTGAGCATGTCTCCAAGATCAGA
TATCTTGGCGACCTGACCCGCGTCCATCGTACATGACTTAATTGTTGTGG
CTGAACAAAATTGGACAGGCTTGGTGGTACAGCATGTTACATGTCGCGCC
TATATCGAAGCTATCCTGTGTAGAGTCAGCACATATTGGGTTCTTCTGCA
GGACAGACATGACTGTCGGCAATTTTCCCCGCGTTTGGCGCTGTCACGTG
ACCGACTTTCCATTCTTCCAACACGTTACGGTGTCGCCGAAAATAAATTC
TAAACTGAAATTTCACCGACGACTACTCCAGGTTCCAGCTAGAGCGGGAG
TGACTCATTGATGACGTCTTACCGTGTCTCTAAAGTTGAACACATCCCTT
CCAAGGAAATAATGCGGCTGTGATTTGAATGACGTCGTTATCCAAACCAA
ACAGTTCCGATGTGCGACGGAGGAATTGTCGGCATCCAGACGAGCGACGT
ATGCTGCTCCGCAAGCTGTGGGTCTTGCGGAGGTACCGGGTGCTCTAGCA
GGGACGGTGGCTCAGGTGCCTGCTGTGGTGGCGGAGTCAGGGCCTCCGGT
CGCTACTGCTCTGTTACGGGAGAAGCACCTTGCATGACCGGTGAGCCCGT
AGGCACGATCGACGCAAGTTTGAACATCGAAGGGGACGAACTCACACATT
GTAGTAACTTAGACGTTTCTTCCTTCGACTTTGAGCCTGTCCCTTTCATA
GCTAGGTACGAGTTACCCCCAGTGAACCATGCAAGTTTGTGGAGCTTAAT
TGTCGTCTTTCTTCAGGCGCACGACTTTCATCAGGCACACGATAACACAG
CAGTGTCAGACCCCATCGGGAACACGCAGCGATATCGGAAGCCTTACTTC
TGGTTATTTTTGTCGGCGTACAGTAGTGCGTTAAACATTTCCTTCCTTGC
AACGGTGCGGCGACAAAACCATTAACGTGATCTTGCACCATTCGTGAAAC
AGGCGCGGCCCCTACCCCTGAACCAACGCCGGCCCCTACGCCGCCCCCTA
CTGTTGAAGGTAAGCGGTGGCCGCTAAAGCCTTGCGCCAAAACAGTCTAG
CATGCCTTCAGGATCAGATATCTTGGATGATAACAGGTCAGAGCATGTTT
TCTTGCCTCTGCAGGAGACACTCCGACGCTTTGACTGATCCGCGTATTCC
CCCCGCTCTTTGTGTGTCACGTCAATGTGTGTGACTGTGCATTGCTCGGC
TGTCGTCTCTTACCGATGGCTATGACGAGGGCATGGTGAGCCACAAAATG
AACTCGTACTAACACAACTGAATTACTACGACAGGTCCCACGTTTGTATT
GGATATTTGAATTTGTCTGGTTGGCATCCTTCAGTTGAAATCACCTCCGT
AAAGTTCGACCGCTGCGTGAAATCGAACAGTTCCTATGTGCGACGGCGGG
ATTGTCGGCATTCAGACGAGCGACGTATGCTGCTCCACAAGCTGCGGGTC
TTGCGGAGGTACCGGGTGCTCCGGCAGGGACGGTGGCTCAGGTGCCTGCT
GTGGTGGCGGAGTCAGGGCCTCCGGTCGCTACTGCTCTGTTACGGGAGAA
GCGCCCTGCATGACCGGTGAGCCTGCAGGCACGAACGATGATGGTTCGGA
AGTCAACGAGAGAAATCCACAGGTAACTCCCTTTTCCTCCATCTTTGCCA
TCTTGATCGTTTCGTACCTCGATATCTTCATATCTGGTTATCCTTCCTTC
AACAACCTTCTCCCCTCTTTGAGAGAGGGATGTCGACCTGTCGCAACTTG
ATATTTGTACGCCAAATTTAAAAACGTTAGAAAGTTAAAGTTTTAACCTG
GTACAGTAGCAGTAGTGTAGCATTATGATTAAAAACACATCTATCGTGCA
GCTGCAATTCTCGTCTTCCATACAGCTTGATTAAAAATCGATGTCAGACA
CCATCGAAAACAGACACAACCGGAAGCCTGACTTCCGGTTCCATGCGTCG
ACGTATTGAACGACCTCCTGCAACACTCCGCCAACAATCCTACGAACGGA
TGCTTGCACAATATGTAAAACAGGGTCGGCCCCTACCCCGGTCCCTACGC
CGGCCCCTACCCCGCCACCTACAGTTGAAGGTAAGCTGTGTTGCGTTGCC
GCCTTGCCCTAAAATCTAAGGTACCTGAGTGCGTGTGGTGACGCAGCTTT
TATGTCCTGATGATCATTAGAAAAGTAGAACGACGCGATCGTGCACTTTG
AAAAGAGGTCATTCTACACGGATACCTGTGTCATTTCCGTCTGCAGGACA
TACTTTGACTTGTCAACTGATCCGCAAAAGACTGTGCACACATGTTTCGC
ACTGTCGCGTCTTGATAATCTGTGAGGCGCGTTAAAAATTTAACTTTCCC
GGAATGACGTCATCCCCAAGTGAACGATTGACCATCATGTTGTCTGGTCG
ATGAAGTTTGGTCGGCTTCGTCGTCTCTCTGGAACCCACCCAACATAAGC
TGTCTTGACGTGAATTTTTTGGCGTCTTCATCCAACAAAACAGTCCCGAA
GTGCGACGGCGGAATTGTCGGCATCCAGGCGAGCGATGTATGCTGCTCCT
TGAGCTGTGAATCTTGCGGAGGTTCCGGGTGCAGTGGCAGGGACGGTGGC
GAAGACGAGTGCTGTGGTGGCGGAGTGAGGGCGTCCGGTCGCGATTGCTC
TGTTACGGGAGAAGCGCCTTGCATCGTGACGAGTAAGCTATTTGGAATAC
GCTTGTGGGAACGTTGCAGGGACAAACTCACACCCTGATAACGTTCTTTG
AAAGGGTAGAGATGCGTCGAATCTATTGGGCCTCCGGTCCCTGCAAACAT
GTGCCCTTCTCTTCCCTTACCGCCTTTGGATAGGTTTTTGGGCCCTCGGT
CGCTACAAATATTCGCCCTTCTCTTCCCTTTACCGCCATTTCGGACGCTT
TATTTTTGGTACACTTCATTTTCGATACAAATATCGATAGGAAGAGATCC
AACTCCTGGTATGAAACTGCCTTCGAGGCGAGTCCTACGCAACTTAAACA
TCCATTCTCCAGACGCCCATCTACAAGTTGTTAGACGCCCACCCGCAACA
AGTAAAGTTGCGCTTCAAGACCGTTCCTCTACTAAAACGGATGATTTCCT
TCAAACGTCCTTTACCACAAATAAATGCAATACTGCGCAAACATAACACA
CTATCTACACATCCCGTTTACACGTAACAGGTCCGGAACCTTCGACGCCG
GCCCCCACGCCAGCCCCTACACGTGCAGGTGCGGTTCTTGCTGCGATTTG
TCGCCATGAGTCATGTCTTGGGCATCGGAAGTATCGCAGACCGACACTTT
GGTTTTCTTCATGACTGCTGTCTCAACAACGTTTTTTCGAAACCACGACA
CATGAATGTGAAGTTGCCTCGTTCATAAGGTGCGACCGGCATGTAAAGAT
TTGAACACGAGATGTGTTTTACCATCCATGATACACTCCGGATACTCTGT
GGGAGAAGATGTGGACTGCCTATATACGGAGTACTGTAGCAACTTCAATA
CCGTCAGGTGACTTGCCCCCGCTCTTAACACTCTTAACACTGCTGTACCA
GTCAGCGTGTCCTGGAATGTCCGTATCGTACGTCCGAACGATGTGCATGG
CATAGCACCATTGTTTTCTCAAGGTGACCATAAATTTTGTTTGGCTTTTG
TCCGCGTACTTCAACGTAAAACAGCGGGGACGTGCGATGGCGGAATTGTC
GGCGTCCAGGCTAGTGATGTTTGCTGCGCCTTGAGCTGTGGTTCTTGCGG
AGGTGACGGGTGCAGTGACAGGGACGGTGGAGAAGACAACTGCTGTGGTG
TCGAAATCAGGACGGCTAATCTCGATTGCTCTGTTACGGGAGAAGCCCCG
TGCATCGTGACGAGTAAGTTGATTGGAATGAAGCTTCCAGTAACGTCGTA
GGGACGAACTCACACTCTCATAACTTATTTCGAAACGATAAAATTGCGTC
AAATCTGAGTGGTTCCTGCACATATTTGCCCTTCCCTTTCTTAACCGTAT
TCGTCTTCTCTTCCCTAACCGCCTTTGGATAGATATTTCGAACGCTTCAT
TTTTTGCCGCACTTTATTAATGATAGGACCTGGTGTAAAACTCTCTTCGA
GGCGAGTCCTACGCAACTTGAACATCCTTTTCCAGGCCCCCATCGACAAA
TTGTGAGACTCCCACCCAAAACAAGTGAAGTTAAAACGCTCAACGACCGT
TCCTCTACCACAACTAATTCATGCCGTCCAACGCCTATTTTCCTCATTTC
CTCATATGGACTACTGCGCAAATATCCATTATGTGAAAAATATTTCGCCA
ACACGCAACAGGTCCGGAACCTTCAACGCCGGCCCCCGCTACGCCGGCCC
CCGCTACGCCGGCCCCCACGCCGGCCCCGTCACGTGCAGGTGCGGTTCTT
GCTGCGACTTGTCGCCATAGTCATGTCTTGGGCATCGGATGTATCACAGA
CCGACACTTTGGTCTTCTGTTCATGACTGCTGTCTCAACAACGTTTTTTC
GAAACCACAACACATGAATGTGAAGTTGCCTCGTTCATAAGGTGCGACCG
GTATCTTAAATTTTGTACACGATATGTTTTTTACTATCCATGATACACTC
CGGATACTCTGTGGAGATGTATGTGGACTGCCTACATACGGAGTACTGTA
GCAACTTGAACACGTTTCGTCAATGCGCATTGGTTTGCCCTTGAAGATGA
GGAATACCTGACTACATGCACATACCTGGTTTTGATTATGACTTGCCCCC
ACTTTTAACACTTGCCCCCCCTTGTACCAGTGCTGTACTGTCTAGCGTGT
CCTGGAAGGTCCTGTTCATTCCTGTATAGTACGTCTGAACGATGTGCATG
GCATAGCAACATTGTTTTCTCAAGGTGACCGACCATTAATTTCCTCTGGC
TTTCTTCCGCTCCCTCCATCGTAAAACAGCGGGGACGTGCGAGGGCGGAA
TTGTCGGTGTCCAGGCTAGTAATGTTTGCTGCGCCTTGAGCTGCGGTTCT
TGCGGAGGTGACGGGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNCAGGTGCGGTTCTTGCTGCGACTTGTCGCCATA
GTCATGTCTTGGGCATCGGATGTATCACAGACCGACACTTTGGTCTTCTG
TTCATGACTGCTGTCTCAACAACGTTTTTTCGAAACCACAACACATGAAT
GTGAAGTTGCCTCGTTCATAAGGTGCGACCGGTATCTTAAATTTTGTACA
CGATATGTTTTTTACTATCCATGATACACTCCGGATACTCTGTGGAGAAG
ATGTGGACTGCCTACATACGGAGTACTGTAGCAACTTGAACACGTTTCGT
CAATGCGCATTGGTTTGCCCTTGAAGATGAGGAATACCTGACTACATGCA
CATACCTGGTTTTGATTATGACTTGCCCCCACTTTTAACAATTGCCCCCC
CTCGTAACACTGCTGTACCAGTTAGCGTGTCCTGGAAGGTCCTGTTCATT
CCTGTATAGTACGTCTGAACGATGTGCATGGCATAGCAACATTGTTTTCT
CAAGGTGACCGACCATTAATTTCGTCTGGCTTTCTTCCGCTCCCTCCATC
GTAAAACAGCGGGGACGTGCGAGGGCGGAATTGTCGGTGTCCAGGCTAGT
AATGTTTGCTGCGCCTTGAGCTGCGGTTCTTGCGGAGGTGACGGGTGCAG
TGACAGGGACGGTGGAGAAGACAACTGCTGTGGTGTCGAAATCAGGACCG
CTAATCTCGATTGCTCTGTTACGGGAGAAGCGCCTTGCATCGTGACGAGT
AAGTTGATTGGAATGAAGCTTCCAGTAACGTCGTAGGGACGAACTCACAC
TCTCATAACTTATTTCGAAACGATAAAATTGCGTCAAATCTGAGTGTGCA
CATATTTGCCCTTCTCTTTCTTAACCGTATTCGCCCTTCTCTTCCCTAAC
CGCCTTTGGATAGATTCATTTTTGGCGAACTTTATTATTGATAGGACCAG
GTATAAAACTGCCTTCGAGGCGAGTCCTACCCAACTTAAACATCCTTTTC
CAGGCCCCCATCGACAAATTGTGAGACTCCCACCCGAAACAAGTAAAGTT
AAAATGCTTTCGACCGTTCCTCTACCACAGCTTATGCATGCCATCAAACG
CCTATTTTCACATTTGCACTACTGCGCAAATATCCATAATGTACAAACTT
TTTTGCCAACACGTAACAGGTCCGGAACCTTCAACGCCGGCCCCTGCTAC
GCCGGCCCCCGCTACGCCGTCCCCTGCTACCCCGGCCCCCGCTACGCCGT
CCCCTGCTACGCCGGCCCCCCGCTACGACGGCCCCCACGCCGGCTCCTTC
ACGTGCAGGTGCGGTTCTTGCTGCGACTTGTCGCCATAGTCATGTCTTGG
GCATCGGATGTATCACAGACCGACACTTTGGTCTTCTGTTCATGACTGCT
GTCTCAACAACGTTTTTTCGAAACCACAACACATGAATGTGAAGTTGCCT
CGTTCATAAGGTGCGACCGGTATCTAAAAAATTGTACACGATATGTTTTT
TACCATCCATGATACACTCCGGATACTCTGTGGAAAAGATGTGGACTGCC
TATATACGGAGTACTGTAGCAACTTGAACACGTTTCGTCAATGCGCATTG
GTTTGCCTTTGAAGATGAGGAATACCTGACTACATGTACATACCTCGTTT
TGATTATGACTTATCCCCACTCTTAACACTGCTGTACCAGTTAGCGTGTC
CTGGAATGTCCTGTTCATTCCTGTATCGTACGTCTGAACGATGTGCATGG
CATAGCAACATTTTTTTCTCAAGGTGACCGACCATTAATTTCGTCTGGCT
TTCTTCCGCTCCCTCCAACGTAAAACAGCGGGGACGTGCGAGGGCGGAAT
TGTCGGTGTCCAGGCTAGTAATGTTTGCTGCGCCTTGAGCTGTGGTTCTT
GCGGAGGTGACGGGTGCAGTGACAGGGACGGTGGAGAAGACAACTGCTGT
GGTGTCGAAATCAGGACGGCTAATCTCGATTGCTCTGTTACGGGAGAAGC
CCCGTGCATCGTGACGAGTAAGTTGATTGGAATGAAGCTTCCAGTAACGT
CGTAGGGACGAACTCACACTCTCATAACTTATTTCGAAACGATAAAATTG
CGTCCAATCTGAGTGGTTCCTGCACATATTTGCCCTTCCCTTTCTTAACC
GTATTTGTCTTCTCTTCCCTAACCGCCTTTGGATAGATATTTCGAACGCT
TCATTTTTTGGCGAACTTTATTATTGATATGACCTGGTATAAAACTGCCT
TCGAGGCGAGTCCCACGCAACTTGAACATCCTTTTCCAGGCCCCCATCGA
CAAATTGTGAGACTCCCACCCGAAAGAAGTAAAGTTAAAATGCTTTCGAC
CGTTCCTCTACCACAACTTATGCATGCCATCAAACGCCTATTTTCACATT
TGCACTACTGCGCAAATATCCATAATGTACAAACTTTTGGCCAACACGTA
ACAGGTCCGGAACCTTCAACGCCGGCCCCTGCTACGCCGGCCCCCGCTAC
GCCGTCCCCTGCTACGCCGTCCCCTGCTACGCCGGCCCCCGGTACGCCGT
CCCCTGCTACGCCGGCCCCCGCTACGCCGGCCCCCGCTACGCCGGCCCCC
ACGCCGGCTCCTTCACGTGCAGGTGCGGTTCTTGCTGCGACTTGTCGCCA
TTAGTCATGTCTTGGGCATCGGATGTATCACAGACCGACACTTTGGTCTT
CTGTTCATGACTGCTGTCTCAACAACGTTTTTTCGAAACCACAACACATG
AATGTGAAGTTGCCTCATTCATAAGGTGCGACCGGTATCTAAAAATTTGT
ACACGATATGTTTTTTACCATCCATGGTACACTCCGGATACTCTGTGGAG
AAGATGTGGACTGCCTACATACGGAGTACTGTAGCAACTTGAACACGTTT
CGTCAATGCGCATTGGTTTGCCTTTGAAGATGAGGAATACCTGACTACAT
GTACATACCTCGTTTTGATTATGACTTATCCCCACTCTTAACACTGCTGT
ACCAGTTAGCGTGTCCTGGAAGGTCCTGTTCATTCCTGTATCGTACGTCT
GAACGATGTGCATGGCATAGCAACATTTTTTTCTCAAGGTGACCGACCAT
TAATTTCGTCTGGCTTTCTTCCGCTCCCTCCAACGTAAAACAGCGGGGAC
GTGCGAGGGCGGAATTGTCGGTGTCCAGGCTAGTAATGTTTGCTGCGCCT
TGAGCTGTGGTTCTTGCGGAGGTGACGGGTGCAGTGACAGGGACGGTGGA
GAAGACAACTGCTGTGGTGTCGAAATCAGGACCGCTAATCTCGATTGCTC
TGATACGGGAGAAGCGCCTTGCATCGTGACGAGTAAGTTGATTGGAATGA
AGCTTGTGGTAGGATCGATGCGAACAATTCATTCATTACTGGTGATTCAA
AAGTGTGCTTCCCGAACCTTGGGGTGGTGTGTCGAGCGGTTTAAATTTAT
CTCTAACGTGCTGCATTAATACTGAAAATCCCAAACGGCCCGCCACCAGC
TTCTTACAACATGTCTCGTTTCTTGCACCCGCGATTCTCTTCTTTCAAGC
ACCTGTGACACAGCAGTGTGAGACATCCACCCGAAAATACAGCACGATCG
AAAGCCTTACTCCATATACTTGTATCAAATTTGCAAGGCAAACGTCCTCA
TCGAAATTCTACGCCAAAATGATTGCGTTCGAACGATTGGATCATTTTCG
AAACAGGCCCCGCCCCTACCCCGGCCCCTTCGACTACGGTCACCACGACG
GCCCCTCCGACCACGGTCACCACGACGGCCCCTCCTACGATGGTCACCAC
GACCGCTCCTCCTACGACGGTCACCACGACGGCCCCTCCTACGATGGTCA
CCACGACCGCCCCTCCTACGCCGGCCCCTGTTGGTGGTCGTGGGGGTCGT
TGAGGCACTACGCCGGCCCCTACGGTTTAACATAATTGAAGTCATACGGT
CAGTAGTGGTGCTCGGTTACGGCCTTAGGCCATTCAGTACAGGTTCCTGG
GGTCAACTATTCCTAAACCATTCTCCACTTACAACCTCCCCCCGGCGGAT
ACTCCTGGGCCATTGAAAAGGGATAAGTTGTTCAACCGTTTTTGGAGGTT
GTGCTCTGCGCATAGGCGGGTTATCGAGCAGGGTTGGTTGTGTTGATTCA
AGGTGTACCCTCTCTTGGAGGTTGCGAACGATGTACGGCCGGATGTTGCC
AAAAGCATTAGTCGTTGGGGTTATATCTCGCATCATACGTTATAAGACCA
GGTAACATGTTAGTGACTTTGATAGGATGAGTCGATTCGGTTGTCCCTTT
GGGTGTTTTAGTCCTGTCGTTTCCCAGCTTCATTCCAGGTTTTGACATAT
CTAAATTAGTCGTATCACTTACCCCAGTACGTCAAAAGAGTTACTTGTTG
ATGGCTGGAGACTCTCAATGTGGCAGAGACGAATGATTATTTGTCAACCT
TGTGTTGAGTACGTTGAGTACAATATACGCACGAGACGTCTGTAGTCGGA
TCTGGGCCAAGGCTTCTTGTCATCCGCTTGTTTTGACAAACTGCAACCCA
AGTGTTGCCGTCGATATCTCTGTGCTTGCATGGTGCAGGCCTCATCCGGC
CACTTTGTCCTCCTTCTGGTCTAACCGACATAATAACTAATTTTATTTTT
TTCTCTGGGTACTCGGTATAAGACGCGGCCGGCTTAATCTCTCACGGAGG
TAGATAACCACGAGCAGTGTATGCCGTGTCGCAACCCACCAAGCGGCGAA
TCGCCGTCCTTCGAGGACATGTTGTGTCCGACTGAAAACTCCACGTGACT
CTTTTCGGCTCGCTCAGCAAGTCGACCGTACGGTTTTACTATCGCCAAAC
ATACCTAACTTCTAGCTCGGGTCTCTCCAGACTAAAGTCTTTTGTTCTGT
GTGTTATAGGGTATCCACTATGGATTGACGCGGAATTTTGACCTTTGAGG
ATTGACGCCAACATAAAGTGACGGTTGAGGGTTTTGACGGGAAAAAATTC
back to top

Coding sequence (CDS) from alignment at chr_00:11177957..11193056+

>Ec-00_007110.3 ID=Ec-00_007110.3|Name=Ec-00_007110.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1230bp|location=Sequence derived from alignment at chr_00:11177957..11193056+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGTGCTGTGCCCAGATCAGGATCGCTGATAACGATTGCTCTGTTACGGG
AGAAGCGCCTTGCATTGTGACGAGCCCGACGCCGGCCCCTGCTACGCCGG
CCCCTACCCCCGAACTGTCGATGTGCGACGGCGGGATTGTCGGGATCCAG
ACGAGCGACGTATGCTGCTCCGCAAGCTGCGGGTCTTGCGGAGGCACCGG
GTGCTCTGGCAGGGACGGTGGCTCAGGTGCCTGCTGTGGTGGCGGAGTCA
GGGCCTCCGGTCGCTACTGCTCTGTTACGGGAGAAGCACCTTGCATGACC
GGCCCGGCCCCTACTCCGGAGCCCACGCCGGCCCCTACGCCGCCCCCTAC
CGTTGAAGTTCCGATGTGCGACGGAGGAATTGTCGGCATCCAGACGAGCG
ACGTATGCTGCTCCGCAAGCTGTGGGTCTTGCGGAGGTACCGGGTGCTCT
AGCAGGGACGGTGGCTCAGGTGCCTGCTGTGGTGGCGGAGTCAGGGCCTC
CGGTCGCTACTGCTCTGTTACGGGAGAAGCACCTTGCATGACCGGCGCGG
CCCCTACCCCTGAACCAACGCCGGCCCCTACGCCGCCCCCTACTGTTGAA
GTTCCTATGTGCGACGGCGGGATTGTCGGCATTCAGACGAGCGACGTATG
CTGCTCCACAAGCTGCGGGTCTTGCGGAGGTACCGGGTGCTCCGGCAGGG
ACGGTGGCTCAGGTGCCTGCTGTGGTGGCGGAGTCAGGGCCTCCGGTCGC
TACTGCTCTGTTACGGGAGAAGCGCCCTGCATGACCGGGTCGGCCCCTAC
CCCGGTCCCTACGCCGGCCCCTACCCCGCCACCTACAGTTGAAGTCCCGA
AGTGCGACGGCGGAATTGTCGGCATCCAGGCGAGCGATGTATGCTGCTCC
TTGAGCTGTGAATCTTGCGGAGGTTCCGGGTGCAGTGGCAGGGACGGTGG
CGAAGACGAGTGCTGTGGTGGCGGAGTGAGGGCGTCCGGTCGCGATTGCT
CTGTTACGGGAGAAGCGCCTTGCATCGTGACGAGCCCCGCCCCTACCCCG
GCCCCTTCGACTACGGTCACCACGACGGCCCCTCCGACCACGGTCACCAC
GACGGCCCCTCCTACGATGGTCACCACGACCGCTCCTCCTACGACGGTCA
CCACGACGGCCCCTCCTACGATGGTCACCACGACCGCCCCTCCTACGCCG
GCCCCTGTTGGTGGTCGTGGGGGTCGTTGA
back to top
Synonyms
The feature 'Ec-00_007110.3' has the following synonyms
Synonym
Esi0531_0003
Esi_0531_0003