Ec-00_007060.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_007060.1
Unique NameEc-00_007060.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length191
Homology
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BLAST of Ec-00_007060.1 vs. uniprot
Match: D7G3U3_ECTSI (Dolichyl-diphosphooligosaccharide--protein glycotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3U3_ECTSI)

HSP 1 Score: 401 bits (1030), Expect = 1.020e-141
Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 1 
Query:    1 MCFYSMHSSYVSSLAYSSPSIVIEAGRTQSGQRILYDDYREAYYWLRHNTDPDAKIMSWWDYGYQGCALASSEEKAYPIMESLDVDYVLVIFGGVTGYSSDDINKFLWPVRIGSGVFPDDMHHEKDFLNPTGQFDVGPAGSKVFQNCLAYKLCYYRFGELRALPDCAADFASRPQVGKEALPSGLGATQA 570
            MCFYSMHSSYVSSLAYSSPSIVIEAGRTQSGQRILYDDYREAYYWLRHNTDPDAKIMSWWDYGYQGCALASSEEKAYPIMESLDVDYVLVIFGGVTGYSSDDINKFLWPVRIGSGVFPDDMHHEKDFLNPTGQFDVGPAGSKVFQNCLAYKLCYYRFGELRALPDCAADFASRPQVGKEALPSGLGATQA
Sbjct:    1 MCFYSMHSSYVSSLAYSSPSIVIEAGRTQSGQRILYDDYREAYYWLRHNTDPDAKIMSWWDYGYQGCALASSEEKAYPIMESLDVDYVLVIFGGVTGYSSDDINKFLWPVRIGSGVFPDDMHHEKDFLNPTGQFDVGPAGSKVFQNCLAYKLCYYRFGELRALPDCAADFASRPQVGKEALPSGLGATQA 190
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BLAST of Ec-00_007060.1 vs. uniprot
Match: A0A7S2XVF7_9STRA (Dolichyl-diphosphooligosaccharide--protein glycotransferase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVF7_9STRA)

HSP 1 Score: 267 bits (683), Expect = 3.880e-85
Identity = 128/185 (69.19%), Postives = 145/185 (78.38%), Query Frame = 1 
Query:    1 MCFYSMHSSYVSSLAYSSPSIVIEAGRTQSGQRILYDDYREAYYWLRHNTDPDAKIMSWWDYGYQ------------------------GCALASSEEKAYPIMESLDVDYVLVIFGGVTGYSSDDINKFLWPVRIGSGVFPDDMHHEKDFLNPTGQFDVGPAGSKVFQNCLAYKLCYYRFGELR 483
            MC Y  HSSYVSSLAYSSPSIVI+AGRT  G+R+LYDDYREAY+WLR NTDP AKI+SWWDYGYQ                        G ALAS+EE AYPI+ESLDVDYVLVIFGG+TGYSSDDINKFLWPVRIGSGV+P+DM +E DFLN  G FDVGP+ S+ F+NC+AYKLCYYRFGE++
Sbjct:   57 MCAYGYHSSYVSSLAYSSPSIVIDAGRTPDGRRVLYDDYREAYFWLRQNTDPSAKILSWWDYGYQMSAMANRTVLVDNNTWNNTHIATVGRALASTEEAAYPILESLDVDYVLVIFGGLTGYSSDDINKFLWPVRIGSGVYPNDMPNENDFLNDQGSFDVGPSASETFKNCVAYKLCYYRFGEVQ 241
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BLAST of Ec-00_007060.1 vs. uniprot
Match: A0A067CLJ4_SAPPC (Dolichyl-diphosphooligosaccharide--protein glycotransferase n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CLJ4_SAPPC)

HSP 1 Score: 258 bits (660), Expect = 3.880e-80
Identity = 122/182 (67.03%), Postives = 143/182 (78.57%), Query Frame = 1 
Query:   10 YSMHSSYVSSLAYSSPSIVIEAGRTQSGQRILYDDYREAYYWLRHNTDPDAKIMSWWDYGYQ------------------------GCALASSEEKAYPIMESLDVDYVLVIFGGVTGYSSDDINKFLWPVRIGSGVFPDDMHHEKDFLNPTGQFDVGPAGSKVFQNCLAYKLCYYRFGELR 483
            Y  H++YVSS+AYSSPSIVIEAGRTQSG+R+++DDYREAY+WLR NT  DA+I++WWDYGYQ                        G ALAS+EE AYPI++SLDVDYVLVIFGG+TGYSSDDINKFLWPVRIGSGVFP+DM  E+DF + +G FDVGP GSK+  NCLAYKLCYYRFGE+R
Sbjct:  231 YQFHAAYVSSMAYSSPSIVIEAGRTQSGERVVFDDYREAYFWLRQNTPADARILAWWDYGYQMSGMANRTVIVDNNTWNNTHIATVGRALASTEEGAYPILQSLDVDYVLVIFGGLTGYSSDDINKFLWPVRIGSGVFPNDMPAERDFYSASGNFDVGPGGSKILHNCLAYKLCYYRFGEMR 412
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BLAST of Ec-00_007060.1 vs. uniprot
Match: W2HBT5_PHYPR (Dolichyl-diphosphooligosaccharide--protein glycotransferase n=9 Tax=Peronosporaceae TaxID=4777 RepID=W2HBT5_PHYPR)

HSP 1 Score: 260 bits (664), Expect = 1.720e-78
Identity = 124/181 (68.51%), Postives = 143/181 (79.01%), Query Frame = 1 
Query:   10 YSMHSSYVSSLAYSSPSIVIEAGRTQSGQRILYDDYREAYYWLRHNTDPDAKIMSWWDYGYQ------------------------GCALASSEEKAYPIMESLDVDYVLVIFGGVTGYSSDDINKFLWPVRIGSGVFPDDMHHEKDFLNPTGQFDVGPAGSKVFQNCLAYKLCYYRFGEL 480
            Y++H++YVSS+AYSSPSIVIEAGRT +G+R+ +DDYREAY+WLR NTD +AKIMSWWDYGYQ                        G ALASSEE AYPI++SLDVDYVLVIFGGVTGYSSDDINKFLWPVRIGSGV+PDDM  E+D+ + +G FDVGP GSKV  NCLAYKLCYYRFGE+
Sbjct:  512 YTLHATYVSSMAYSSPSIVIEAGRTHTGERVNFDDYREAYFWLRQNTDANAKIMSWWDYGYQMSAMANRTVIVDNNTWNNTHIATVGRALASSEEDAYPILQSLDVDYVLVIFGGVTGYSSDDINKFLWPVRIGSGVYPDDMPSERDYYSTSGNFDVGPGGSKVLHNCLAYKLCYYRFGEV 692
[Close]
BLAST of Ec-00_007060.1 vs. uniprot
Match: A0A1V9Z2X8_9STRA (Dolichyl-diphosphooligosaccharide--protein glycotransferase n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9Z2X8_9STRA)

HSP 1 Score: 259 bits (663), Expect = 2.530e-78
Identity = 124/182 (68.13%), Postives = 143/182 (78.57%), Query Frame = 1 
Query:   10 YSMHSSYVSSLAYSSPSIVIEAGRTQSGQRILYDDYREAYYWLRHNTDPDAKIMSWWDYGYQ------------------------GCALASSEEKAYPIMESLDVDYVLVIFGGVTGYSSDDINKFLWPVRIGSGVFPDDMHHEKDFLNPTGQFDVGPAGSKVFQNCLAYKLCYYRFGELR 483
            Y  H++YVSS+AYSSPSIVIEAGRTQSG+R+++DDYREAY+WLR NT  DA+I+SWWDYGYQ                        G ALAS+EE AYPI++SLDVDYVLVIFGG+TGYSSDDINKFLWPVRIGSGVFP+DM  E+DF + +G FDVGP GSKV  NCLAYKLCYYRFGE+R
Sbjct:  515 YQFHAAYVSSMAYSSPSIVIEAGRTQSGERVVFDDYREAYFWLRQNTAADARILSWWDYGYQMSGMANRTVIVDNNTWNNTHIATVGRALASTEEGAYPILQSLDVDYVLVIFGGLTGYSSDDINKFLWPVRIGSGVFPNDMPAERDFYSASGNFDVGPGGSKVLHNCLAYKLCYYRFGEMR 696
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BLAST of Ec-00_007060.1 vs. uniprot
Match: A0A3M6VAL3_9STRA (Dolichyl-diphosphooligosaccharide--protein glycotransferase n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VAL3_9STRA)

HSP 1 Score: 258 bits (660), Expect = 6.500e-78
Identity = 122/181 (67.40%), Postives = 143/181 (79.01%), Query Frame = 1 
Query:   10 YSMHSSYVSSLAYSSPSIVIEAGRTQSGQRILYDDYREAYYWLRHNTDPDAKIMSWWDYGYQ------------------------GCALASSEEKAYPIMESLDVDYVLVIFGGVTGYSSDDINKFLWPVRIGSGVFPDDMHHEKDFLNPTGQFDVGPAGSKVFQNCLAYKLCYYRFGEL 480
            YSMH++YVSS+AYSSPSIVIEAGRT++G+ ++YDDYREAY+WLR NTD +AKIMSWWDYGYQ                        G ALAS+EE AYPI++SLDVDYVLVIFGGV+GYSSDDINKFLWPVRIGSGV+P+DM  E+DF + +G FD+GP GSK   NCLAYKLCYYRFGE+
Sbjct:  512 YSMHATYVSSMAYSSPSIVIEAGRTRTGEHVIYDDYREAYFWLRQNTDDNAKIMSWWDYGYQMSAMANRTVIVDNNTWNNTHIATVGRALASTEEDAYPILQSLDVDYVLVIFGGVSGYSSDDINKFLWPVRIGSGVYPNDMPSERDFYSASGNFDIGPGGSKFLHNCLAYKLCYYRFGEV 692
[Close]
BLAST of Ec-00_007060.1 vs. uniprot
Match: A0A8K1C594_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C594_PYTOL)

HSP 1 Score: 256 bits (654), Expect = 4.960e-77
Identity = 123/181 (67.96%), Postives = 141/181 (77.90%), Query Frame = 1 
Query:   10 YSMHSSYVSSLAYSSPSIVIEAGRTQSGQRILYDDYREAYYWLRHNTDPDAKIMSWWDYGYQ------------------------GCALASSEEKAYPIMESLDVDYVLVIFGGVTGYSSDDINKFLWPVRIGSGVFPDDMHHEKDFLNPTGQFDVGPAGSKVFQNCLAYKLCYYRFGEL 480
            Y+ H++YVSS+AYSSPSIVIEAGRT SG+R+ +DDYREAY+WLR NTD +AKIM+WWDYGYQ                        G ALAS+EE AYPIM+SLDVDYVLVIFGG+TGYSSDDINKFLWPVRIGSGV+PDDM  E+DF + +G FDVG  GSKV  NCLAYKLCYYRFGE+
Sbjct:  514 YTFHATYVSSMAYSSPSIVIEAGRTHSGERVNFDDYREAYFWLRQNTDANAKIMAWWDYGYQMSAMANRTVIVDNNTWNNTHIATVGRALASTEEDAYPIMQSLDVDYVLVIFGGLTGYSSDDINKFLWPVRIGSGVYPDDMPSERDFYSASGNFDVGAGGSKVLHNCLAYKLCYYRFGEV 694
[Close]
BLAST of Ec-00_007060.1 vs. uniprot
Match: I2CR01_NANGC (Dolichyl-diphosphooligosaccharide--protein glycotransferase n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=I2CR01_NANGC)

HSP 1 Score: 256 bits (654), Expect = 6.050e-77
Identity = 123/183 (67.21%), Postives = 143/183 (78.14%), Query Frame = 1 
Query:    1 MCFYSMHSSYVSSLAYSSPSIVIEAGRTQSGQRILYDDYREAYYWLRHNTDPDAKIMSWWDYGYQ------------------------GCALASSEEKAYPIMESLDVDYVLVIFGGVTGYSSDDINKFLWPVRIGSGVFPDDMHHEKDFLNPTGQFDVGPAGSKVFQNCLAYKLCYYRFGE 477
            +C +  H++YVSS+AYSSPSIVI+AGR   G+R+++DDYREAY+WLR NTDP+AKI+SWWDYGYQ                        G ALAS+EE AYPI+ESLDVDYVLVIFGG+TGYSSDDINKFLWPVRIGSGVFP+DM +EKDF + +G FDVGP GSKV  NCLAYKLCYYRFGE
Sbjct:  521 LCLFGYHANYVSSIAYSSPSIVIDAGRMPDGRRVMFDDYREAYFWLRQNTDPNAKILSWWDYGYQMSAMANRTVIVDNNTWNNTHIATVGRALASTEEDAYPILESLDVDYVLVIFGGLTGYSSDDINKFLWPVRIGSGVFPNDMPNEKDFFSDSG-FDVGPQGSKVLHNCLAYKLCYYRFGE 702
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BLAST of Ec-00_007060.1 vs. uniprot
Match: A0A7S4D8W8_HETAK (Dolichyl-diphosphooligosaccharide--protein glycotransferase n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D8W8_HETAK)

HSP 1 Score: 256 bits (655), Expect = 6.240e-77
Identity = 123/185 (66.49%), Postives = 139/185 (75.14%), Query Frame = 1 
Query:    1 MCFYSMHSSYVSSLAYSSPSIVIEAGRTQSGQRILYDDYREAYYWLRHNTDPDAKIMSWWDYGYQ------------------------GCALASSEEKAYPIMESLDVDYVLVIFGGVTGYSSDDINKFLWPVRIGSGVFPDDMHHEKDFLNPTGQFDVGPAGSKVFQNCLAYKLCYYRFGELR 483
            +CFY  HS+YVSS+AYSSPSIVI+AGR   GQR++YDDYREAY+WLR NTDP AKI+SWWDYGYQ                        G ALASSE  AYPI ESLDVDYVLVIFGG+TGYSSDDINKFLWPVRIGSGV+PDDM  E+DF+N  GQFDVGP  S  F+  +AYK CYYRFGE++
Sbjct:  536 LCFYGYHSTYVSSMAYSSPSIVIDAGRRPDGQRVMYDDYREAYFWLRQNTDPMAKILSWWDYGYQMSAMANRTVLVDNNTWNNTHIATVGRALASSEAAAYPIFESLDVDYVLVIFGGLTGYSSDDINKFLWPVRIGSGVYPDDMPQERDFMNAQGQFDVGPQASATFKESVAYKTCYYRFGEVQ 720
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BLAST of Ec-00_007060.1 vs. uniprot
Match: A0A484E0M2_BRELC (Dolichyl-diphosphooligosaccharide--protein glycotransferase n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E0M2_BRELC)

HSP 1 Score: 255 bits (652), Expect = 9.010e-77
Identity = 121/184 (65.76%), Postives = 143/184 (77.72%), Query Frame = 1 
Query:    1 MCFYSMHSSYVSSLAYSSPSIVIEAGRTQSGQRILYDDYREAYYWLRHNTDPDAKIMSWWDYGYQ------------------------GCALASSEEKAYPIMESLDVDYVLVIFGGVTGYSSDDINKFLWPVRIGSGVFPDDMHHEKDFLNPTGQFDVGPAGSKVFQNCLAYKLCYYRFGEL 480
            M  YS H++YVSS+AYSSPSIVIEAGRTQ+G+R+ +DDYREAY+WLR NTD +AKIM+WWDYGYQ                        G ALAS+EE AYPI++SLDVDYVLVIFGGVTGY SDDINKFLWPVRIGSGV+P+DM  E+D+ + +G FD+GP GSK+  NCLAYKLCYYRFGE+
Sbjct:  507 MLSYSFHATYVSSMAYSSPSIVIEAGRTQTGERVNFDDYREAYFWLRQNTDANAKIMAWWDYGYQMSAMANRTVIVDNNTWNNTHIATVGRALASTEEDAYPILQSLDVDYVLVIFGGVTGYGSDDINKFLWPVRIGSGVYPNDMPAERDYYSVSGSFDIGPGGSKILHNCLAYKLCYYRFGEV 690
The following BLAST results are available for this feature:
BLAST of Ec-00_007060.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3U3_ECTSI1.020e-141100.00Dolichyl-diphosphooligosaccharide--protein glycotr... [more]
A0A7S2XVF7_9STRA3.880e-8569.19Dolichyl-diphosphooligosaccharide--protein glycotr... [more]
A0A067CLJ4_SAPPC3.880e-8067.03Dolichyl-diphosphooligosaccharide--protein glycotr... [more]
W2HBT5_PHYPR1.720e-7868.51Dolichyl-diphosphooligosaccharide--protein glycotr... [more]
A0A1V9Z2X8_9STRA2.530e-7868.13Dolichyl-diphosphooligosaccharide--protein glycotr... [more]
A0A3M6VAL3_9STRA6.500e-7867.40Dolichyl-diphosphooligosaccharide--protein glycotr... [more]
A0A8K1C594_PYTOL4.960e-7767.96Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
I2CR01_NANGC6.050e-7767.21Dolichyl-diphosphooligosaccharide--protein glycotr... [more]
A0A7S4D8W8_HETAK6.240e-7766.49Dolichyl-diphosphooligosaccharide--protein glycotr... [more]
A0A484E0M2_BRELC9.010e-7765.76Dolichyl-diphosphooligosaccharide--protein glycotr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:11092870..11098280 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score403.3
Seed ortholog evalue6.4e-110
Seed eggNOG ortholog2880.D7G3U3
Preferred nameSTT3A
Length573
KEGG rclassRC00005,RC00482
KEGG koko:K07151
KEGG ReactionR04216,R05976
KEGG Pathwayko00510,ko00513,ko01100,ko04141,map00510,map00513,map01100,map04141
KEGG ModuleM00072
Hectar predicted targeting categoryother localisation
Gene idEc-00_007060.1
GOsGO:0003674,GO:0003824,GO:0004576,GO:0004579,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005886,GO:0006464,GO:0006486,GO:0006487,GO:0006807,GO:0006950,GO:0006970,GO:0008150,GO:0008152,GO:0008250,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009628,GO:0009651,GO:0009987,GO:0012505,GO:0016020,GO:0016740,GO:0016757,GO:0016758,GO:0018193,GO:0018196,GO:0018279,GO:0019538,GO:0031984,GO:0032991,GO:0034645,GO:0036211,GO:0042175,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043413,GO:0043687,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0047484,GO:0048583,GO:0050789,GO:0050896,GO:0065007,GO:0070085,GO:0071704,GO:0071944,GO:0080134,GO:0098796,GO:0098827,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1990234
EggNOG free text desc.oligosaccharyl transferase activity
EggNOG OGsCOG1287@1,KOG2292@2759
EC2.4.99.18
COG Functional cat.F
CAZyGT66
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01003
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_007060Ec-00_007060Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 11092870..11098280 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_007060.1Ec-00_007060.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 11092870..11098280 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_007060.1.1Ec-00_007060.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 11092870..11092992 +
Ec-00_007060.1.2Ec-00_007060.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 11094078..11094149 +
Ec-00_007060.1.3Ec-00_007060.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 11095548..11095595 +
Ec-00_007060.1.4Ec-00_007060.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 11096158..11096289 +
Ec-00_007060.1.5Ec-00_007060.1.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 11096933..11097040 +
Ec-00_007060.1.6Ec-00_007060.1.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 11097211..11097283 +
Ec-00_007060.1.7Ec-00_007060.1.7Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 11098264..11098280 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_007060.1CDS:Ec-00_007060.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 11092870..11092992 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_007060.1 ID=Ec-00_007060.1|Name=Ec-00_007060.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=191bp
MCFYSMHSSYVSSLAYSSPSIVIEAGRTQSGQRILYDDYREAYYWLRHNT
DPDAKIMSWWDYGYQGCALASSEEKAYPIMESLDVDYVLVIFGGVTGYSS
DDINKFLWPVRIGSGVFPDDMHHEKDFLNPTGQFDVGPAGSKVFQNCLAY
KLCYYRFGELRALPDCAADFASRPQVGKEALPSGLGATQA*
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spliced messenger RNA

>Ec-00_007060.1 ID=Ec-00_007060.1|Name=Ec-00_007060.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=573bp|location=Sequence derived from alignment at chr_00:11092870..11098280+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGTGCTTCTACTCGATGCATTCGTCGTACGTGTCGTCTCTGGCGTACTC
GAGCCCCTCGATCGTGATAGAGGCCGGCAGGACGCAGTCTGGGCAGAGGA
TCCTATATGATGACTATCGCGAGGCGTACTACTGGCTGCGGCACAACACC
GACCCCGACGCGAAGATCATGTCATGGTGGGACTACGGCTACCAGGGCTG
CGCCCTTGCTTCTTCAGAGGAGAAGGCCTACCCTATCATGGAGTCCCTGG
ACGTGGACTACGTGCTGGTGATCTTCGGGGGAGTGACGGGCTACTCTAGC
GACGACATCAACAAGTTCTTGTGGCCCGTGCGGATCGGAAGCGGCGTTTT
CCCCGACGACATGCACCATGAGAAGGACTTCCTCAATCCCACCGGGCAGT
TCGACGTGGGCCCTGCCGGATCGAAGGTCTTCCAGAACTGCCTGGCCTAC
AAGCTGTGCTACTACCGCTTTGGCGAGCTCCGGGCTCTGCCAGACTGTGC
TGCAGACTTTGCGTCTCGTCCCCAAGTCGGGAAGGAGGCTCTTCCAAGCG
GTTTAGGTGCTACCCAGGCCTAG
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protein sequence of Ec-00_007060.1

>Ec-00_007060.1 ID=Ec-00_007060.1|Name=Ec-00_007060.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=191bp
MCFYSMHSSYVSSLAYSSPSIVIEAGRTQSGQRILYDDYREAYYWLRHNT
DPDAKIMSWWDYGYQGCALASSEEKAYPIMESLDVDYVLVIFGGVTGYSS
DDINKFLWPVRIGSGVFPDDMHHEKDFLNPTGQFDVGPAGSKVFQNCLAY
KLCYYRFGELRALPDCAADFASRPQVGKEALPSGLGATQA*
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mRNA from alignment at chr_00:11092870..11098280+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_007060.1 ID=Ec-00_007060.1|Name=Ec-00_007060.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=5411bp|location=Sequence derived from alignment at chr_00:11092870..11098280+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGTGCTTCTACTCGATGCATTCGTCGTACGTGTCGTCTCTGGCGTACTC
GAGCCCCTCGATCGTGATAGAGGCCGGCAGGACGCAGTCTGGGCAGAGGA
TCCTATATGATGACTATCGCGAGGTGTGCATATGCATGCATGCATGCAGT
CGTGTTGGTTGATCCGCTAAATTGTGCTAAAGAGGGTACCGTTTCTGAGA
GGGGGCTCTGATGAATGAGGATACCTTATGTGACGCGGCTCCGATATGTG
TAAGAGGATACCTAATTGGAGGGGGCTCCGGTGTATCAGAGGGTCGAAAT
GGGTTGTCACGCACTCGACCCGTTTTACTCGCCAAGTATACTTGTAGTCG
GGAACCCTTGTATGAGGGGGCTTGTAAGAGGGTCGAACTCGATTGTCACG
GACTCGACCCTCTATAGTATACTTGGTTGGGTATCGGGGCTCCGACATAA
GAGGGTACAGCAGTAGTCGTCCCCGCTTTGAAGATGCACACGTTTTCGGA
AGCGCCTTCAACGCGGGGCATCGTGTTTAAGAAACGGTACCCCCCCCTGC
ATGTTGTATATCTGCGGGGCACCTTGCTGCTGAGATGTTTGTTTGGGTCC
TTAAACCGGGGAGTTGACCTAAGATGGCGTCTTGAAAGAGGAGACGACTG
TTCCTTGTAAGAGGGGGACGCCAATACAAGAGGGTCGGAATCGAGTTGTC
TTTTGTCACGGACTCCTACAAGTATAGTTGGGTACCGGGGCTTCGATATA
AGAGGGCCGAGGGCCTGTGTCACAGCACCCTCTTGTATCGGAGCCACGAC
TGCATTTACGGCATTTTTTTTTTTTTTGTTTGTCATGCCGTTAATACTGG
ACGTCGGTTTTTTTTCCACATTCCGGTACATTTTACCCGTTTTTTTGACA
AGATTCAATTTCTTTTGGGGTGTTGTTGTGTTTTTGTGGTGGGAAGTTTT
TTTTAATTTTAATTCGCCCCAACCGGGGTCACCCCCAGGGGGAAAGTCCC
CCAGGATTTTTTTTTTTTTTTTGTGGCATGATCCGGCCGGTGTACCGGTG
TTTTCGTGTGATGTGGTATGCGGGGTTGTTGTGTTTTTCGTACTTTCGTT
GGTGGCAAGACGGAGGGCTTGGTCGGTGTTGGTTGGCAGGGGTGCGTGCT
TTAAATTGTCCGCCTTTGCCTATGCCCCCCCCCCCCCTGCTACGATGGCA
CACCCCAGGCGTACTACTGGCTGCGGCACAACACCGACCCCGACGCGAAG
ATCATGTCATGGTGGGACTACGGCTACCAGGTGCGGTACGGAACGATACG
GTACGGAACGGTGCGAAATAGTACGGTTTGGCCGTACGGCCGGGTACGGA
ATGGTACGGAACGGTACAGTACGGAGCGGGGCTGCGCTCGTAGCTCTGCT
TACTTTGGGTGCGCAACAACAGGCGGAGCTTTGTAAACACACTAGGTTTC
TCGCGGCCCTGCGCGTGTTCCTTGCGTTTCTCTGTGACCTCCCCGACGTG
GTTTGTTATTGTCGTCCATACAGGTAAACGATGGTACTCGATTTTTCTTG
GTGTTGAAGTTGTTTCGTGCGCATGGCATCCTCGCAGGCTGTTGTTGTGG
CTATGATCCCCGCTCCCCCCGACCCCGACAGTGGTTGGCCATCGGTTAAA
GGTCGTGTAGGAACAATGCTTCGTTCGTCCTCTCGAGGACCGCGGTCTGT
AACAATCAAGGCACGCGCAACATGAGTATGCCCCCCCCCCCCCCCGGGGG
TTGCCATCCGAGTTGGGTTTTCCTCCCTTGGCCACCACGTTGTAAAAAAA
GCCGCCCCGCCCCCCCAAGGGTTTGCCATAGGGGTTTGGGTTTTTGTCCC
TTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NAAATAAATTAAGTCATACGTAGCTGTCATCCGTACGCAAGGAAGTAAGC
ACAAGATGCCGAACACCCTTAGCAGGATGCAGCTCACCCTTCATGCGACT
CGCCAAATACCTCACGGCGCTTCGCGCTTGGTGATGTGAGAGCCTGGTCC
GGTGAGAACCCGGCGTGCTCCGTCCCGGCTTTGTAGGGATGCGAGGTCAA
TGGTCAAACGACTACGGCATGCACGACTATGAGTACACCCCCCCCCCCCC
AACAAACTTGATTCGCGCCCCCCAATCCGTAACCCTCGTTGTGTGATGTG
TCCAGATGTCGGCCATGTCCAACCGCACCGTGCTCGTGGACAACAACACC
TGGAACAACACCCACATCGCTACCGTAGGGCTGCGCCCTTGCTTCTTCAG
AGGAGAAGGCCTACCCTATCATGGAGGTGTGGTGGCACGCTAAATAGTTG
CTACTGCAGCGCGTTGGTTTGACGGGGTGACGGTGGCAGCAGTGTGGGGG
TCGTTGCTACTGTTGTTGCGGCGGTGGTTGTTGTTGTTGTTGTTGTTGTT
GTTGTTGTTGTTGTTGTTGTTGTCTTGTTGTCTTGGCATTAGAAACCGAT
CCGGTATCTGCTCGGTACCGTTTCAATGGGCTCGTTCCTGGAGTTCAAAG
AGCGATCACGCGTTCTTGGCGCACACGCACACGCACACGCACACGCACAC
CCACCAACGCCAATGTTCCACCAGCGTGGTTTGCTCGTCGTGCTTTCCGA
CAGCGTCCCGACCGCAACCCGTTGCTTTTTCTTCCGCCATGATACGCAAG
GGTCGTCCAATGTCCCCTTGCTTCTCTACAGCAGTCTTGTACATAGATGT
GGACCAACAAGTATCGGTATACCACTTGGGAAGGGTTAGGTTCCACTCTG
AGCGACGCCAGCAACGATCCCACCCCCGTCGCCCGGTCCCGGCAATCACT
GTACCTGTGCACGTTCGCTGTTGTTACACAATTGACAGTCCCTGGACGTG
GACTACGTGCTGGTGATCTTCGGGGGAGTGACGGGCTACTCTAGCGACGA
CATCAACAAGTTCTTGTGGCCCGTGCGGATCGGAAGCGGCGTTTTCCCCG
ACGACATGCACCATGAGAAGGTATTAATAGGTGCCTTTCAAGTACGGCAT
GCGGATTTGAGTGGTTTGCGGTACCGAAATGGTATTTTTTACGGCGCGGT
ACCACACGGAATGCATCATGGGAACGTGCCTTGGTACAAGGCATGCGGCA
TGAAATGGTGTTGTTTGTACCACACGGAATGCATCATGGGAAGGTGCCTT
GGTACAAGGTATGGTGCATAAAATGAGTCGTGGTACGCTACGAGCCGGTA
CGGTATGGCCACGGTACGGAACAGCACGGCGGCGAGGGAATTTCGTAGCA
CGCCATGCGGGACGCTACGGCATAAACACCTCGATGACGAACTGCCAGTT
GACCCTGAAACAACAAGCGACATCCACATATAGCGCCGAAATATGTGGTC
CCTCGTTAACACGACAAACATCGCGGCCGGCCTCTCCATTCGACCCACGA
TATGTGTGTGTGTGTGTTTTTTTTGTTTTTTTTTTCACGCGGGATCAGGC
CCTTGTCCGGAACCCCGCTCTCCCGTTATACTATCTCCCCATCCGCCAAA
GCTAGCTAGAAAGCGCCGCGATATTGTAGAAGGTCGTTCTTCCGGCGTTT
GGGCTAACGCGTCCCTACCGTCTGTCCCTCTTGACGCGTGTTTCTTGTTT
TTCCTTGGGGCAGGACTTCCTCAATCCCACCGGGCAGTTCGACGTGGGCC
CTGCCGGATCGAAGGTCTTCCAGAACTGCCTGGCCTACAAGCTGTGCTAC
TACCGCTTTGGCGAGCTCCGGGTGCGTCTCGATAGAGAGAGAGAGAGGCG
TTTGCTTCAGCCGTTTCTTCAGACTTTGCTTCAGGCTTTGCGTCAGGGTT
TGTGTCAGACTTTGCTTCAGACTTTAATTCAGGCCTTGCAGGCTTTGCGC
CAGGCTTTGCACCAGACTTTGCGCCGGACTTTGTGCGTCAGGCTCTGCCA
GACTGTGCTGCAGACTTTGCGTCTCGTCCCCAAGTCGGGAAGGAGGCTCT
TCCAAGCGGTTTAGGTAACTCTTTCCCCCGGCTTCTTGGCCAGCTCGGGG
AACCGCCAGGAGACCTGTTGGAATTGAACTTGCCAAAGGAGGGCCAGAGG
GGGGAGGGGGCGGGCGGGATACCTTGCTACGTCAATCTCTGAGTGAACCT
TTCGGTACCAGTTGCACTAAAACGTTTATCTTTTTTTATCTCGGGAGGTT
TTGCGAAGGAGCTTGACTCCCTAACCAGGCACCCCACTTGTACCCACGTA
AAGCTGTCCAACAGTGGAATGCCCCCTTCGTGAAACTTTTGTCGCGTTCT
TTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNATGAAGGGTGAGGATGCCTCGTGAGAAAGA
CCCAAGAACAGGAGCTCACTCCCCCCCCCCCCTTGCATCTCCACCCTGAT
GACGTGTACATTCGATGTCCGTGTCCGTCCATGACAGACGCCTGCTGAGC
ACATTTACCCCTCTTACTCTGGTTTCCCCTTGACTCCTGAGCAGGTGCTA
CCCAGGCCTAG
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Coding sequence (CDS) from alignment at chr_00:11092870..11098280+

>Ec-00_007060.1 ID=Ec-00_007060.1|Name=Ec-00_007060.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=573bp|location=Sequence derived from alignment at chr_00:11092870..11098280+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGTGCTTCTACTCGATGCATTCGTCGTACGTGTCGTCTCTGGCGTACTC
GAGCCCCTCGATCGTGATAGAGGCCGGCAGGACGCAGTCTGGGCAGAGGA
TCCTATATGATGACTATCGCGAGGCGTACTACTGGCTGCGGCACAACACC
GACCCCGACGCGAAGATCATGTCATGGTGGGACTACGGCTACCAGGGCTG
CGCCCTTGCTTCTTCAGAGGAGAAGGCCTACCCTATCATGGAGTCCCTGG
ACGTGGACTACGTGCTGGTGATCTTCGGGGGAGTGACGGGCTACTCTAGC
GACGACATCAACAAGTTCTTGTGGCCCGTGCGGATCGGAAGCGGCGTTTT
CCCCGACGACATGCACCATGAGAAGGACTTCCTCAATCCCACCGGGCAGT
TCGACGTGGGCCCTGCCGGATCGAAGGTCTTCCAGAACTGCCTGGCCTAC
AAGCTGTGCTACTACCGCTTTGGCGAGCTCCGGGCTCTGCCAGACTGTGC
TGCAGACTTTGCGTCTCGTCCCCAAGTCGGGAAGGAGGCTCTTCCAAGCG
GTTTAGGTGCTACCCAGGCCTAG
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Synonyms
The feature 'Ec-00_007060.1' has the following synonyms
Synonym
Esi0529_0017
Esi_0529_0017