Ec-00_007000.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_007000.1
Unique NameEc-00_007000.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length620
Homology
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BLAST of Ec-00_007000.1 vs. uniprot
Match: A0A6H5L4A3_9PHAE (TYR_PHOSPHATASE_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4A3_9PHAE)

HSP 1 Score: 763 bits (1971), Expect = 8.650e-263
Identity = 521/585 (89.06%), Postives = 526/585 (89.91%), Query Frame = 2 
Query:  230 MTRPLAAPEIGPPSTXXXXXXXXXXXXXXXXXXXXVDEGLVAAVELLLAEVEALRRASSFPGLEALSSIDKAGRYLGPTMESNWVLPGRLLVGAYPASMNDSHHAHLLCTILLQGVSTFVCLQQEYQAEGVTEEMWRSGDALRPYFQDVVQLLAKLGELRRADPRSVPAICAPEETDFVHFPIVDCNVADDTKVLQLAAQLAGRLARGEVMYLHCWGGHGRTGTVVCIMLHLMYGLSADEAMERCQHVHDVRRIPISVGSPQTEAQRQQVRRVIGRVIAHRRSLVPSPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISGADLSPESSRXXXXXXXXXXXXXXXXXXGGRRAWVRGRRQAFAQAPNGVGEDVSGWLDDDNEAEGDGLSDLQRGKKLKAGAGQTSAHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMPRRKSFTEPYSKDDPSRGTRMSRARRKSAPGKPPADVLAARXXXXXXXXXXXXXXXXXXXKEDKDDGWTKSLLSISPAKGINCRQTPSVAACSTPGDDAAAAASPGSCTGVERCVTRSSGGGGGTSYRAR 1984
            MTRPLAAPEIGPP T  XXXXX     XXXX    VDEGLVAAVELLLAEVEALRRASSFPGLEALSSIDKAGRYLGPTMESNWVLPGRLLVGAYPASMNDSHHAHLLCTILLQGVSTFVCLQQEY+AEGVTEEMWRSGDALRPYFQDVVQLLAKLGELRRADPRSVPAICAPEETDFVHFPIVDCNVADDTKVLQLAAQLAGRLARGEVMYLHCWGGHGRTGTVVCIMLHLMYGL ADEAMERCQHVHDVRRIPISVGSPQTE+QRQQVRRVIGRVIAHRRSLVPS P   XXXXXXXXXXXXXXXXXXXXXXXXXXXX   ISG+ LSPESSR                  GGRRAWVRGRRQAFAQAPNGVGEDVSGWLDDDNE EGDGLSDLQ GKKLKAGAGQTSAHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMPRRKSFTEPYSKD+PSRG RMSRARRKSAPGKPPADVLAARXXXXXXXXXXXXXXXXXXX           LL +SPAKGINCRQT S AACSTPGDDAAAA SPGSCTGVERCVTRSSGGGG TS RAR
Sbjct:    1 MTRPLAAPEIGPPLTDDXXXXXAVSDVXXXXGEEEVDEGLVAAVELLLAEVEALRRASSFPGLEALSSIDKAGRYLGPTMESNWVLPGRLLVGAYPASMNDSHHAHLLCTILLQGVSTFVCLQQEYRAEGVTEEMWRSGDALRPYFQDVVQLLAKLGELRRADPRSVPAICAPEETDFVHFPIVDCNVADDTKVLQLAAQLAGRLARGEVMYLHCWGGHGRTGTVVCIMLHLMYGLGADEAMERCQHVHDVRRIPISVGSPQTESQRQQVRRVIGRVIAHRRSLVPSSPPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXX---ISGSVLSPESSRKKEAGRGATTAASAPTTVGGRRAWVRGRRQAFAQAPNGVGEDVSGWLDDDNEVEGDGLSDLQGGKKLKAGAGQTSAHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMPRRKSFTEPYSKDEPSRGMRMSRARRKSAPGKPPADVLAARXXXXXXXXXXXXXXXXXXXXXXXXXXXX--LLLLSPAKGINCRQTSSNAACSTPGDDAAAAPSPGSCTGVERCVTRSSGGGG-TSCRAR 579
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BLAST of Ec-00_007000.1 vs. uniprot
Match: D7G3T8_ECTSI (TYR_PHOSPHATASE_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3T8_ECTSI)

HSP 1 Score: 494 bits (1273), Expect = 3.510e-163
Identity = 268/269 (99.63%), Postives = 268/269 (99.63%), Query Frame = 2 
Query:  230 MTRPLAAPEIGPPSTXXXXXXXXXXXXXXXXXXXXVDEGLVAAVELLLAEVEALRRASSFPGLEALSSIDKAGRYLGPTMESNWVLPGRLLVGAYPASMNDSHHAHLLCTILLQGVSTFVCLQQEYQAEGVTEEMWRSGDALRPYFQDVVQLLAKLGELRRADPRSVPAICAPEETDFVHFPIVDCNVADDTKVLQLAAQLAGRLARGEVMYLHCWGGHGRTGTVVCIMLHLMYGLSADEAMERCQHVHDVRRIPISVGSPQTEAQRQQ 1036
            MTRPLAAPEIGPPST XXXXXXXXXXXXXXXXXXXVDEGLVAAVELLLAEVEALRRASSFPGLEALSSIDKAGRYLGPTMESNWVLPGRLLVGAYPASMNDSHHAHLLCTILLQGVSTFVCLQQEYQAEGVTEEMWRSGDALRPYFQDVVQLLAKLGELRRADPRSVPAICAPEETDFVHFPIVDCNVADDTKVLQLAAQLAGRLARGEVMYLHCWGGHGRTGTVVCIMLHLMYGLSADEAMERCQHVHDVRRIPISVGSPQTEAQRQQ
Sbjct:    1 MTRPLAAPEIGPPSTDXXXXXXXXXXXXXXXXXXXVDEGLVAAVELLLAEVEALRRASSFPGLEALSSIDKAGRYLGPTMESNWVLPGRLLVGAYPASMNDSHHAHLLCTILLQGVSTFVCLQQEYQAEGVTEEMWRSGDALRPYFQDVVQLLAKLGELRRADPRSVPAICAPEETDFVHFPIVDCNVADDTKVLQLAAQLAGRLARGEVMYLHCWGGHGRTGTVVCIMLHLMYGLSADEAMERCQHVHDVRRIPISVGSPQTEAQRQQ 269
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BLAST of Ec-00_007000.1 vs. uniprot
Match: A0A7S3YH03_HETAK (Protein-tyrosine-phosphatase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YH03_HETAK)

HSP 1 Score: 253 bits (647), Expect = 3.300e-73
Identity = 129/221 (58.37%), Postives = 158/221 (71.49%), Query Frame = 2 
Query:  401 SSFPGLEALSSIDKAGR-YLGPTMESNWVLPGRLLVGAYPASMNDSHHAHLLCTILLQGVSTFVCLQQEYQAEGVTEEMWRSGDALRPYFQDVVQLLAKLGELRRADPRSVPAICAPEETDFVHFPIVDCNVADDTKVLQLAAQLAGRLARGEVMYLHCWGGHGRTGTVVCIMLHLMYGLSADEAMERCQHVHDVRRIPISVGSPQTEAQRQQVRRVIGRV 1060
            SSFP LE L  I K    Y+GPT ESNWV+PG LLVGAYP SM+D     +L  IL+  V+TFVCLQQEY  EGVTE+MWRSG+ LRPYF+D V    +LG     D  S+           +HFPI DC  ADD ++  LA  L   LA+GEVMYLHCWGGHGRTGTV+C++LHLMY  +AD+A ERCQ++HD+RRIP++VGSPQT+ QR+QVRRVI ++
Sbjct:   21 SSFPTLEDLRDIAKHPEDYVGPTDESNWVIPGLLLVGAYPCSMDDVETWEILRGILVLKVTTFVCLQQEYVHEGVTEQMWRSGEYLRPYFKDAVGFAPRLG----LDAASL---------SLLHFPIEDCGTADDDRLAALAHHLVSLLAKGEVMYLHCWGGHGRTGTVICLLLHLMYNYTADQAFERCQYLHDLRRIPVAVGSPQTQGQREQVRRVIEKL 228
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BLAST of Ec-00_007000.1 vs. uniprot
Match: A0A5A8C9N1_CAFRO (TYR_PHOSPHATASE_2 domain-containing protein n=5 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C9N1_CAFRO)

HSP 1 Score: 222 bits (565), Expect = 9.940e-62
Identity = 120/219 (54.79%), Postives = 146/219 (66.67%), Query Frame = 2 
Query:  452 YLGPTMESNWVLPGRLLVGAYPASMNDSHHAHLLCTILLQGVSTFVCLQQEYQAEGVTEEMWRSGDALRPYFQDVVQLLAKLGELRRADPRSVPAICAPEETD---FVHFPIVDCNVADDTKVLQLAAQLAGRLARGEVMYLHCWGGHGRTGTVVCIMLHLMYGLSADEAMERCQHVHDVRRIPISVGSPQTEAQRQQVRRVIGR--VIAHRRSLVPSP 1093
            Y GPT ESNWVL GRLLVGAYP +++D  +  +L +IL  G++TFVCLQ EYQ  GV+ E W +G  LRPY  D V+LL  +   R   P      CAP+ T+   F+HFPIVDC+ A+DT VL+LA  L  RLA GE +Y+HCWGGHGRTGTVV IML LMYGL A   M   QHVHD+R  P+ VG+PQT  QR+QV R++      A R SL P P
Sbjct:   51 YRGPTEESNWVLHGRLLVGAYPGAVDDGQNDAILRSILELGITTFVCLQSEYQHRGVSREDWIAGTKLRPYIYDAVRLLPSI---RWPSPSQC---CAPKPTEGLHFLHFPIVDCSTANDTGVLELAHDLVNRLASGENLYVHCWGGHGRTGTVVSIMLGLMYGLPARNCMAYLQHVHDLRICPMDVGTPQTSQQRRQVIRILSARPPAAPRASLAPDP 263
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BLAST of Ec-00_007000.1 vs. uniprot
Match: A0A813AT18_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813AT18_9DINO)

HSP 1 Score: 218 bits (555), Expect = 4.670e-60
Identity = 121/227 (53.30%), Postives = 144/227 (63.44%), Query Frame = 2 
Query:  380 VEALRRASSFPGLEALSSIDKAGRYLGPTMESNWVLPGRLLVGAYPASMNDSHHAHLLCTILLQGVSTFVCLQQEYQAEGVTEEMWRSGDALRPYFQDVVQLLAKLGELRRADPRSVPAICAPEETDFVHFPIVDCNVADDTKVLQLAAQLAGRLARGEVMYLHCWGGHGRTGTVVCIMLHLMYGLSADEAMERCQHVHDVRRIPISVGSPQTEAQRQQVRRVIGRV 1060
            V+ L   +  P LEA  SID    Y+GPT ESNWV+P R+LVGAYP +  D  ++ +L +IL  GV+TFVCLQ EYQ  GVTEE WRSG+ LRPY  D +QLL    E   AD    P    P+  DFVH PIVDC    D KVL LA  L  RL  GE +Y+HCWGGHGRTGTVV +ML +MYGL    AM   Q  HD+R  P  V SPQT  QR+QV R++ +V
Sbjct:   38 VKPLADYADVPPLEAPVSIDPDS-YIGPTEESNWVIPSRMLVGAYPGATEDELNSEILTSILELGVTTFVCLQSEYQHHGVTEEQWRSGEKLRPYIFDALQLL----ETCPAD--YFPEGRKPDSLDFVHLPIVDCATVSDGKVLSLAYDLCRRLKAGENLYVHCWGGHGRTGTVVSLMLGIMYGLPPMAAMAWVQMFHDMRIAPCGVPSPQTAEQRKQVTRILVKV 257
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BLAST of Ec-00_007000.1 vs. uniprot
Match: A0A8J2T0D3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T0D3_9STRA)

HSP 1 Score: 210 bits (535), Expect = 3.760e-55
Identity = 110/223 (49.33%), Postives = 143/223 (64.13%), Query Frame = 2 
Query:  404 SFPGLEALSSID-KAGRYLGPTMESNWVLPGRLLVGAYPASMNDSHHAHLLCTILLQGVSTFVCLQQEYQAEGVTEEMWRSGDALRPYFQDVVQLLAKLGELRRADPRSVPAICAPEETDFVHFPIVDCNVADDTKVLQLAAQLAGRL-ARGEVMYLHCWGGHGRTGTVVCIMLHLMYGLSADEAMERCQHVHDVRRIPISVGSPQTEAQRQQVRRVIGRVIA 1066
            + P LE+   I  +  RY+GPT ESNWVLPGRL+VGA+P   +D  +  LL +IL  G++TFVCLQ+EY  +   E  WRSG A+RPY+   V L A+    RR +              F+HF I DC+V +D  V   +  LA RL    EV+YLHCWGGHGR GT+ C++LH +YGL+A +AM RCQ VHD+RR+PI VGSPQT+ QR QV RV+   +A
Sbjct:   33 TLPPLESFQVISQRKQRYVGPTDESNWVLPGRLMVGAFPGVSDDRENDRLLNSILSCGITTFVCLQREYDPDA-PESAWRSGAAIRPYYPSAVALAARHHRGRRLE--------------FIHFGIEDCSVVEDDAVAAFSRSLADRLRCTDEVIYLHCWGGHGRAGTITCLLLHWLYGLNALDAMARCQFVHDLRRVPIVVGSPQTQTQRDQVCRVVASSLA 240
[Close]
BLAST of Ec-00_007000.1 vs. uniprot
Match: A0A7S2WTD1_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WTD1_9STRA)

HSP 1 Score: 206 bits (525), Expect = 4.430e-55
Identity = 109/241 (45.23%), Postives = 146/241 (60.58%), Query Frame = 2 
Query:  341 EGLVAAVELLLAEVEALRRASSFPGLEALSSIDKAGRYLGPTMESNWVLPGRLLVGAYPASMNDSHHAHLLCTILLQGVSTFVCLQQEYQAEGVTEEMWRSGDALRPYFQDVVQLLAKLGELRRADPRSVPAICAPEETDFVHFPIVDCNVADDTKVLQLAAQLAGRLARGEVMYLHCWGGHGRTGTVVCIMLHLMYGLSADEAMERCQHVHDVRRIPISVGSPQTEAQRQQVRRVIGRVI 1063
            E  + A  LL  ++   ++  SF  +E        G Y+GPT ESNWVLPG+LLVGAYPA ++D  H  LL +IL  GV+TFVCLQ+EY       + WR+G  +RPY  D  ++  +   L           C   E  F+H PI DC+V  D  VL+LA  L  RL  GEV+Y+HCWGGHGRTGT+V IML ++YG+   EA++R Q  HD+R  P+ V SPQT +QR QV R++ +V+
Sbjct:   28 EEALGAEALLDCQLGISQKLPSFKEIE-----QHRGMYVGPTEESNWVLPGKLLVGAYPAEVDDVAHEKLLRSILQCGVTTFVCLQKEYDHSSTDPKEWRAGTKIRPYINDAYRITKQDNTL---------GTCRSSELSFLHVPIADCDVTSDQVVLRLAQSLCWRLIAGEVLYIHCWGGHGRTGTLVAIMLGMLYGIPKAEALKRTQLYHDLRVCPLHVPSPQTFSQRMQVLRILEKVL 254
[Close]
BLAST of Ec-00_007000.1 vs. uniprot
Match: A0A7S3NIH7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NIH7_9STRA)

HSP 1 Score: 206 bits (523), Expect = 9.140e-55
Identity = 110/226 (48.67%), Postives = 143/226 (63.27%), Query Frame = 2 
Query:  410 PGLEALSSID-KAGRYLGPTMESNWVLPGRLLVGAYPASMNDSHHAHLLCTILLQGVSTFVCLQQEYQAEGVTEEMWRSGDALRPYFQDVVQLLAKLGELRRADPRSVPAICAPEETDFVHFPIVDCNVADDTKVLQLAAQLAGRLA-RGEVMYLHCWGGHGRTGTVVCIMLHLMYGLSADEAMERCQHVHDVRRIPISVGSPQTEAQRQQVRRVIGRVIAHRRSL 1081
            P LE +  I     RY GPT ESNW +PGRL+VGA+P  ++D  +A+LL  IL QG++TFVCLQ+EY      E  WR G ALRPYF   V++ A+L      DP          +  F+HF I DC+VA+D+ V   A +LA R+    +++YLHCWGGHGR GT+ C++ HL+YGL    AM RCQ VHD R+IPI+VGSPQT  Q  QV R+I R    ++SL
Sbjct:   79 PPLEPMRKIGANPTRYCGPTDESNWAIPGRLMVGAFPGMIDDVENANLLKNILNQGITTFVCLQREYNPRA-RESDWRKGLALRPYFNSAVEICAEL------DPH--------RDLHFLHFGIQDCSVAEDSAVEAFARRLARRIRDTDQIIYLHCWGGHGRAGTITCLLFHLLYGLDDKTAMRRCQLVHDCRKIPINVGSPQTRTQCDQVSRIIHRWTKKQQSL 289
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BLAST of Ec-00_007000.1 vs. uniprot
Match: A0A6C0F341_9ZZZZ (TYR_PHOSPHATASE_2 domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0F341_9ZZZZ)

HSP 1 Score: 189 bits (481), Expect = 1.650e-50
Identity = 101/222 (45.50%), Postives = 138/222 (62.16%), Query Frame = 2 
Query:  401 SSFPGLEALSSIDKAGRYLGPTMESNWVLPGRLLVGAYPASMNDSHHAHLLCTILLQGVSTFVCLQQEYQAEGVTEEMWRSG-----DALRPYFQDVVQLLAKLGELRRADPRSVPAICAPEETDFVHFPIVDCNVADDTKVLQLAAQLAGRLARGEVMYLHCWGGHGRTGTVVCIMLHLMYGLSADEAMERCQHVHDVRRIPISVGSPQTEAQRQQVRRVI 1051
            ++F GL  L+ I++   + GP  ESNWV+PG+L+ GA+P   +D  + + L  IL  GV+ FVC+Q+EY    + EE WR         +RPYF DV +++    E +   P     +       F H PI DC+   D  V  LA  L   +  GEV+YLHCWGGHGRTG +VC+MLHLMYGL+A+EA+ERCQ +HD+R++PI V SPQT  Q+ QVRR+I
Sbjct:   41 TTFSGLVPLNEINREDIF-GPIAESNWVVPGKLIAGAFPGYTDDIENTNSLIKILNCGVTKFVCMQEEYNV-AIKEEDWRKNCYGKTSVVRPYFADVQRIM----ENKVIHPTLSTDVF---NVTFEHCPIKDCSTVADDIVFSLAKDLVKAIHDGEVVYLHCWGGHGRTGIMVCLMLHLMYGLTANEALERCQFLHDIRKMPIIVSSPQTFRQKDQVRRII 253
[Close]
BLAST of Ec-00_007000.1 vs. uniprot
Match: A0A061SJ53_9CHLO (Map kinase phosphatase n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SJ53_9CHLO)

HSP 1 Score: 186 bits (471), Expect = 3.190e-48
Identity = 93/200 (46.50%), Postives = 126/200 (63.00%), Query Frame = 2 
Query:  458 GPTMESNWVLPGRLLVGAYPASMNDSHHAHLLCTILLQGVSTFVCLQQEYQAEGVTEEMWRSGDALRPYFQDVVQLLAKLGELRRADPRSVPAICAPEETDFVHFPIVDCNVADDTKVLQLAAQLAGRLARGEVMYLHCWGGHGRTGTVVCIMLHLMYGLSADEAMERCQHVHDVRRIPISVGSPQTEAQRQQVRRVIGR 1057
            GPT  SNWV+ G +LVGAYPA+++D     +L T+L  G+ TFVCLQ E     V+E  WRSG ALRPY  D  ++L++  +       S  A       DF+H P+VD +V  D  +++L      R+ RGE +Y+HCWGGHGRTGT+VC++L  +YGL +  A+  CQ  HD RR P +V SPQT  QR QV+R++GR
Sbjct:   23 GPTAWSNWVIKGHVLVGAYPATIDDRETEEILTTLLETGIDTFVCLQAEVSLN-VSEARWRSGYALRPYIHDAQRILSRAHQ-------SGXARIPQTRLDFLHLPVVDGSVTTDEAIMRLRDDCCERILRGERLYIHCWGGHGRTGTLVCLILGKLYGLPSATALHLCQCYHDTRRFPQNVRSPQTPVQRAQVQRILGR 214
The following BLAST results are available for this feature:
BLAST of Ec-00_007000.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L4A3_9PHAE8.650e-26389.06TYR_PHOSPHATASE_2 domain-containing protein n=1 Ta... [more]
D7G3T8_ECTSI3.510e-16399.63TYR_PHOSPHATASE_2 domain-containing protein n=1 Ta... [more]
A0A7S3YH03_HETAK3.300e-7358.37Protein-tyrosine-phosphatase (Fragment) n=1 Tax=He... [more]
A0A5A8C9N1_CAFRO9.940e-6254.79TYR_PHOSPHATASE_2 domain-containing protein n=5 Ta... [more]
A0A813AT18_9DINO4.670e-6053.30Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 ... [more]
A0A8J2T0D3_9STRA3.760e-5549.33Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2WTD1_9STRA4.430e-5545.23Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A7S3NIH7_9STRA9.140e-5548.67Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A6C0F341_9ZZZZ1.650e-5045.50TYR_PHOSPHATASE_2 domain-containing protein n=1 Ta... [more]
A0A061SJ53_9CHLO3.190e-4846.50Map kinase phosphatase n=1 Tax=Tetraselmis sp. GSL... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:11049823..11055840 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score496.5
Seed ortholog evalue1.8e-137
Seed eggNOG ortholog2880.D7G3T8
Length3631
Hectar predicted targeting categoryother localisation
Gene idEc-00_007000.1
EggNOG OGs2BVII@1,2S2A7@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_007000Ec-00_007000Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 11049823..11055840 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_007000.1Ec-00_007000.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 11049951..11054197 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_007000.1.1Ec-00_007000.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 11049823..11049953 +
Ec-00_007000.1.2Ec-00_007000.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 11050299..11050553 +
Ec-00_007000.1.3Ec-00_007000.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 11051043..11051465 +
Ec-00_007000.1.4Ec-00_007000.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 11053019..11055840 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0070005UTR:Ec-00_007000.1Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_00 11049823..11049950 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_007000.1CDS:Ec-00_007000.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 11049951..11049953 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0070003UTR:Ec-00_007000.1Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_00 11054198..11055840 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_007000.1 ID=Ec-00_007000.1|Name=Ec-00_007000.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=620bp
MLPKSAPQAAPSGMSGGTAAVDAEAAAAAAAANIMTRPLAAPEIGPPSTD
DEEEEEDQSDVEEEQEEEEVDEGLVAAVELLLAEVEALRRASSFPGLEAL
SSIDKAGRYLGPTMESNWVLPGRLLVGAYPASMNDSHHAHLLCTILLQGV
STFVCLQQEYQAEGVTEEMWRSGDALRPYFQDVVQLLAKLGELRRADPRS
VPAICAPEETDFVHFPIVDCNVADDTKVLQLAAQLAGRLARGEVMYLHCW
GGHGRTGTVVCIMLHLMYGLSADEAMERCQHVHDVRRIPISVGSPQTEAQ
RQQVRRVIGRVIAHRRSLVPSPPPAAAATSPAPKQHQHQHQRESSPSNGG
GGGGGGGISGADLSPESSRKKEAGGGATTAASASTTVGGRRAWVRGRRQA
FAQAPNGVGEDVSGWLDDDNEAEGDGLSDLQRGKKLKAGAGQTSAHRRHH
HHRMPSTVSSESLPSSVGVAAATAAATAAAAASSSSSSMPRRKSFTEPYS
KDDPSRGTRMSRARRKSAPGKPPADVLAARAAAAAAAADGASSSSSSSGK
EDKDDGWTKSLLSISPAKGINCRQTPSVAACSTPGDDAAAAASPGSCTGV
ERCVTRSSGGGGGTSYRAR*
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spliced messenger RNA

>Ec-00_007000.1 ID=Ec-00_007000.1|Name=Ec-00_007000.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=3631bp|location=Sequence derived from alignment at chr_00:11049823..11055840+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
CCCCGCCCTGCTGTGAACAGTAATTTTGGGCACGACCGCACCACCACGAG
CCACGTGCCGCAGCAGCTGCAGCTACAGGACAATTTAACAGGCCGCCCTA
CCTCTCCGTGACTGTGGAGCACCGCGCGATGTTGCCAAAGTCAGCACCAC
AGGCAGCACCATCAGGAATGAGCGGCGGGACGGCAGCAGTAGACGCAGAG
GCAGCAGCAGCAGCAGCAGCAGCCAACATCATGACGAGACCGCTAGCTGC
GCCCGAGATAGGTCCTCCCTCGACCGATGACGAGGAAGAGGAGGAGGACC
AGTCCGACGTAGAGGAGGAGCAAGAGGAGGAAGAAGTCGACGAGGGGCTG
GTCGCAGCCGTTGAACTTTTGCTGGCGGAGGTAGAGGCGCTGCGAAGGGC
GAGCTCCTTCCCCGGCCTGGAGGCGCTGTCCAGCATCGACAAGGCCGGGC
GGTACCTCGGTCCCACCATGGAGTCGAACTGGGTGCTCCCGGGGCGTCTG
CTCGTGGGCGCGTACCCGGCGTCCATGAACGACAGCCACCACGCCCACCT
CCTCTGCACCATCCTGCTGCAGGGAGTCTCGACCTTCGTGTGCCTGCAGC
AGGAGTACCAGGCGGAGGGCGTGACGGAGGAGATGTGGAGGTCGGGCGAC
GCGCTCAGGCCGTACTTCCAAGACGTGGTGCAGCTGCTGGCGAAGCTCGG
GGAGCTCAGGAGGGCAGACCCGAGGTCCGTGCCCGCCATCTGCGCGCCGG
AGGAGACCGACTTCGTGCACTTCCCGATCGTCGACTGCAACGTCGCCGAC
GATACCAAGGTGCTCCAACTCGCCGCACAGCTGGCCGGCCGGCTTGCCCG
CGGCGAGGTGATGTACCTGCACTGCTGGGGAGGGCACGGCCGCACGGGCA
CCGTGGTGTGCATCATGCTGCACCTCATGTACGGCCTCAGCGCTGACGAG
GCCATGGAGCGTTGCCAGCACGTGCACGACGTCCGGCGCATCCCGATAAG
CGTGGGGTCCCCGCAGACGGAGGCGCAGCGTCAGCAGGTGCGCCGCGTGA
TCGGGCGCGTCATCGCCCACCGCCGGTCTCTCGTGCCGTCTCCGCCGCCG
GCAGCGGCGGCCACCTCTCCGGCACCGAAGCAGCACCAGCACCAGCACCA
GCGGGAGTCGTCGCCATCCAACGGCGGCGGCGGCGGCGGCGGCGGCGGCA
TCAGCGGTGCCGACCTCTCCCCGGAGAGCAGCAGGAAGAAGGAGGCCGGA
GGAGGCGCCACGACCGCTGCTTCTGCTTCGACTACCGTGGGCGGTCGCCG
AGCGTGGGTGCGGGGGCGGCGGCAGGCGTTCGCCCAGGCGCCCAACGGCG
TTGGCGAAGACGTGTCCGGCTGGCTGGACGACGACAACGAAGCCGAAGGG
GATGGGCTCAGCGACCTACAGCGTGGCAAGAAGCTCAAGGCGGGAGCGGG
CCAGACCAGCGCCCACCGCCGCCACCACCACCACCGCATGCCTTCCACGG
TGTCGTCGGAGTCGTTGCCGTCCTCGGTAGGCGTAGCGGCGGCGACGGCG
GCGGCAACGGCGGCGGCAGCGGCGTCGTCGTCGTCGTCGTCGATGCCGCG
CCGAAAGTCGTTCACGGAGCCCTACTCGAAGGACGACCCGTCGCGAGGGA
CGAGGATGAGCCGCGCGCGGCGCAAGTCGGCGCCGGGCAAGCCGCCGGCC
GACGTACTTGCGGCACGCGCTGCTGCTGCTGCTGCTGCTGCTGATGGCGC
GTCGTCGTCGTCGTCGTCGTCGGGCAAAGAGGACAAGGATGACGGTTGGA
CGAAGTCGCTACTGTCGATCAGCCCCGCGAAGGGGATCAACTGCCGCCAG
ACGCCGTCGGTGGCGGCGTGCTCGACGCCAGGGGATGATGCCGCGGCCGC
CGCGTCCCCGGGTTCGTGCACGGGGGTGGAGCGGTGCGTGACGAGGTCTA
GCGGCGGCGGCGGGGGAACCTCCTACCGCGCGAGGTGATAGGGGTCATGC
CATGCTTGTCGCTTCCGTCGGTGGATCCAATTTCCGTTCTTGGAATGGGA
GGAACGTTGTAACGTTGCCGCCCCGCTGCACGGAGGCGCCGCCTAGGCTC
AGGCAGTGAGTGGCTTGGGCGCCAGCAGCGAGGGCAACAGGAACGTTGAT
CGAGTCGCGGGGAAGGGGTGCGGCGGGAGCATCGGAACTCGTTTCGTTTC
GGTGTTGCGGCGAGACGGTACAGTCACGTGTACAGCAGCAACAACTACAG
CTAGATACGAGATAGCGAGAGGTTGATGGTGGGTTCCCCACGGGCCGGAC
GGTCTTTCGCTTCGTGGCGTTTATATATATATATTTTTTTTTTGTGATTG
TGTTCTTTTTTTCTCTTGTTTTTTTGTGGGGTGTGGTTTGGTTTACTCTC
GCGGTTAAGTCAGGCAAGGCAGTCACCGTTCGTCCTTGGAAGAGGGGCGC
GGGCGAAGTGCTAGGGAAAAGCGCAGAGCGACTGCAAGCGCAGAGCGACT
GCAAGCGCAGAGCGACTGCTACTGCTGTTGTGCTCCTTCGTCGTCGATGT
CGTACAATACCTCGTCTTTAGTTTGGGCGTTACAGCACCGCGCCGTCGGG
GGGTGGATGCACTTGTGGATGCCTATTTTCATTGATTCCATTTACTGGAC
GATTGGCGATACTCGTGCGCGTTCGTTCGCCCGTGAACTTATTGTTGGAA
CAGCAGTGCTCTTCGAAGTGGCTGTGTGTGGTTGTGGGTGTTTTTGTTCC
CGAGAACGATGCGCTTTTACCTTCCTTTTTTTTACAAGGGCGGGCAGCAG
CAGCAGTTGACTCCACGCATGTCGTAGCAAAAATAGCTCGCTGGTTTTCA
CGTGAGGATGGGCGATGATTGTCGTTTCTGATGGAAGAATGGGTGGGGGA
TATTCCTGTACCCACACCATAACAGCGTAGAATGGGAGGTGTTTCGACTT
TTTCTTGCTGGTGCGGTGGGTAACGGCACGACTTTGGTGGGTGGTGATTA
TTACTTGCTGCCCGACGACCCCCCGGGCGCTCTGCTTCTTGGTACACCCA
GACCTACAGCAGCAGCAGCAGCTCGTTCAGCCGCCTTGCTTGTGGTGCGG
GATCTACGAGAGTCTCGCCTTCAAGCCGACGCCTCTGTCCAAGCCTGCTC
CTGCGGCCGAATCCGGCGTGCCGTGCCTAACTGTGACGGGTGTTTGTTTT
CTGTTCTGCTGCGCCACCTTTTTTTGAATCTACGTCGTCTTTGTTTTGTC
GCCTTTTTTTCTGTTGTGCTTGTGTGCTTGTGTGTCCGGTTACTGGCGGC
GATGGTTGAAGAAAAACGGATGTTTCAACACGATCAAGGACGTCGTTAGG
GGGGGGGACTGAAACACGCCTCTCCCCCGTAATTGCTGGTACACCTTTGA
CGACGAAAGTCGTTGCGTGCCTGTGGTGTGATCTGTGTGCATGATCCATA
TGTTCTGCATGAATTATTGAGTACTGTGGGTGGTGTGGAGGTGAACTGCG
TGGTTGATTGATTTATGTTAAAGCTTGTCGTGCGACCGAGCAGATGTCCG
GCGGACCATTTGCAGTGGATCGGCCGTGACCCCGGGGGACACATCAAAAG
AGTAGAATCTCCAGCGCGTGGTGGGGGGGGA
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protein sequence of Ec-00_007000.1

>Ec-00_007000.1 ID=Ec-00_007000.1|Name=Ec-00_007000.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=620bp
MLPKSAPQAAPSGMSGGTAAVDAEAAAAAAAANIMTRPLAAPEIGPPSTD
DEEEEEDQSDVEEEQEEEEVDEGLVAAVELLLAEVEALRRASSFPGLEAL
SSIDKAGRYLGPTMESNWVLPGRLLVGAYPASMNDSHHAHLLCTILLQGV
STFVCLQQEYQAEGVTEEMWRSGDALRPYFQDVVQLLAKLGELRRADPRS
VPAICAPEETDFVHFPIVDCNVADDTKVLQLAAQLAGRLARGEVMYLHCW
GGHGRTGTVVCIMLHLMYGLSADEAMERCQHVHDVRRIPISVGSPQTEAQ
RQQVRRVIGRVIAHRRSLVPSPPPAAAATSPAPKQHQHQHQRESSPSNGG
GGGGGGGISGADLSPESSRKKEAGGGATTAASASTTVGGRRAWVRGRRQA
FAQAPNGVGEDVSGWLDDDNEAEGDGLSDLQRGKKLKAGAGQTSAHRRHH
HHRMPSTVSSESLPSSVGVAAATAAATAAAAASSSSSSMPRRKSFTEPYS
KDDPSRGTRMSRARRKSAPGKPPADVLAARAAAAAAAADGASSSSSSSGK
EDKDDGWTKSLLSISPAKGINCRQTPSVAACSTPGDDAAAAASPGSCTGV
ERCVTRSSGGGGGTSYRAR*
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mRNA from alignment at chr_00:11049823..11055840+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_007000.1 ID=Ec-00_007000.1|Name=Ec-00_007000.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=6018bp|location=Sequence derived from alignment at chr_00:11049823..11055840+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
CCCCGCCCTGCTGTGAACAGTAATTTTGGGCACGACCGCACCACCACGAG
CCACGTGCCGCAGCAGCTGCAGCTACAGGACAATTTAACAGGCCGCCCTA
CCTCTCCGTGACTGTGGAGCACCGCGCGATGGTGAGACTTTCTATTGGCG
CTCGACAGCAGCAGCCGCCTCTGTGTGTTGTGTCCGCACATGGAGAGGAT
GCGGCGCGGCGCTATAATACCGCCGCGCCTGCTGTAGCAGCTCTATTCCT
CGTTTCCCGGATTCGTTCCTTTGGCGCGATTTTTTTTTTGGCGGCGCCGG
CGTTTGCTGCGTTTGCGCCGGATCCTCGTTGCATCTCGGCGCGCTAGAGG
ATCCTCGTCGTGCCTAGGACACTTTCAGCCGATTGAGGAAGTCGCGCCCT
TTAAATATCTCGTCGGTCGGTCCCTCATTCGTGTATGATTAATTTCCTCC
CCTCTCTCTGCGTGTGTGTGCGTTAGTTGCCAAAGTCAGCACCACAGGCA
GCACCATCAGGAATGAGCGGCGGGACGGCAGCAGTAGACGCAGAGGCAGC
AGCAGCAGCAGCAGCAGCCAACATCATGACGAGACCGCTAGCTGCGCCCG
AGATAGGTCCTCCCTCGACCGATGACGAGGAAGAGGAGGAGGACCAGTCC
GACGTAGAGGAGGAGCAAGAGGAGGAAGAAGTCGACGAGGGGCTGGTCGC
AGCCGTTGAACTTTTGCTGGCGGAGGTAGAGGTGAGGGTGTGCGTTGGCG
CTTTTTTTCTTCTTTTTCCCCGCACACACCCAGGACCGCCCTCTTCTCCT
CTATTTCCGCAGCCGTTAGGCTTGTGGGTGCACCTGTCGGTGGAACATCC
AAGCGTATGTACCAATCCGCTACTGGACAGCAGGCCGCTGCCCTCTCTCT
CTCTCTCCCGGTCGGCGCTTCGGTTTGCGGTTTTGTCTTGCGTGCTGCAA
AAAATGGAAGGACATTCTTCATTTCTTGTACTTCTGTGTACATGACCTTT
TGATAAAATGGACCTATTCTATGTAGCAGTAATACTCCTGTTCATTTAAG
CAGTACAGACATGTTTACCCAACCGCTCCGAATTCTGACTGGCCTCGAAA
GGGAAGGGGGGGGGGGGGCATGCATGCCCATGCCCCCTCGCCGGTAACAG
TTGTTGCCACTCATGCACACATGCACACCCACCACTTCTTCTCCCGTTCT
TCCCACCCGCAACAACACAGGCGCTGCGAAGGGCGAGCTCCTTCCCCGGC
CTGGAGGCGCTGTCCAGCATCGACAAGGCCGGGCGGTACCTCGGTCCCAC
CATGGAGTCGAACTGGGTGCTCCCGGGGCGTCTGCTCGTGGGCGCGTACC
CGGCGTCCATGAACGACAGCCACCACGCCCACCTCCTCTGCACCATCCTG
CTGCAGGGAGTCTCGACCTTCGTGTGCCTGCAGCAGGAGTACCAGGCGGA
GGGCGTGACGGAGGAGATGTGGAGGTCGGGCGACGCGCTCAGGCCGTACT
TCCAAGACGTGGTGCAGCTGCTGGCGAAGCTCGGGGAGCTCAGGAGGGCA
GACCCGAGGTCCGTGCCCGCCATCTGCGCGCCGGAGGAGACCGACTTCGT
GCACTTCCCGATCGTCGACTGCAACGTCGCCGACGATACCAAGGTATGCT
TTGTTTGTGAATGCAGCATATATTAGACTTTTGACAAGTATTTTTTTTTG
CACTCCATTGCTCGTGGGATGCTTGTATTGTATGCATTCTCCGGAGCACT
GCAGTATAGCATTCATGTTTATTTGTTTTTTATTTTTTCATTTTTTCCCA
TATTCTTACGTCGGAGTCCAGCGTTACAGGTACGCACACGTGCAACCATT
GCGTGCGTCTTGATGATGCGCGTGTTTCTTCGAAACGCCGCATTTGTGGT
GCGGATTGCAGTCAAGGGTTCGCTCATGTATCACGTGGCAACACGGCGTG
CAAGCAACCATTGCCGTGTGTGCGAATCTACTTGTTTCGGAACGCCGCGC
GTGTGAGGCATCATGCCTATGACGCACGCATCTGTATGTAGTCAAAAGGC
TCGCTGCTGTGCGCGGCGCGGAATAACCTTCCAACACAGAGTGATTGCTC
CTCCATATGTGTTCAGTACTGCTGCTGTGTGTGGCCGGTTATCTCTCTGG
CCTGCTGCCGCGACTGATGGGGGGTTCTCGTTCCCCCCCCCCCCCCCCCG
GTGAAGCCCAACCAACCGCTCAGAGGGGTGTACCAGTATCTAAAACCGCC
ATGGAACTGCTTGTCTTGTTCGCGACTTGACACAACACAAGTATAACGGG
ACTTTGCAGGCTTGCTGCTGCGGGGGTAGCGCGTGTGTGTGAGTCCTTGT
CGCTTCTCTTATCTGAAGCTAGATACTACAAGCGAACAACGCGTATTTAC
ATTTTATTTGTATACAGCAGTAGCACACTTTTTTCTGCCCCCTTTTTCCC
ACGGGCTGCTGTCGGTCGGCTACTGTTGAAGACCCGTTAATAAAAAAAAA
GAAACACCCCATCACATCTATGCATTTGCGCCCAGCAAGCGGGGGGCGGG
GCTTCCAGTGCAAGATAGCTCCCGCTCTTTGTTGGCAAGCAACGCGAACG
TATACTACCCATGTTTGTGGTTGGGTGTTTCACACCCCAGGATTCACGCG
GTTTGTTGCTGGTGCCACTTCTGAGTACCACGTGCAGTAGCTCATTGGGC
AGTTTCGTCGCGAAGAAGAACAACATCTCGTCACTCGTTACCGAACACGA
TCAAGCGGGCAGGGTGTTTGGCTTCGCGAAGGATGCTTTCTCTTTTTTTT
TTGTTCTTCGTGGCACACAGCAGCAGCAGGCGGGTGCGCGGTGACGTTAG
TTGCACGACAACGTTACCTCGGCGGGGATGGCCATACCCGTTGGCACCAT
GCGGCACGACTTCGAGCCGATTTAGGGCATCTGAGGGTGCTCCTCCCGTC
TGCAGGGTATCATGAAAGCGCGCAAGGGTGTAATGCACCCCACGTTCCAT
CGCTCTTGCTTTTCACGCATTCGCAGCGTATGAACTTAGACCTTGCGCGA
CACCGGACACTTGGAACACCCCATCTCCGTCTGCCCCGCCATTTTTGTCA
CCTTTGACTTGCCTTTGATGCCCACGTTGACACCGTCCGTATCCCCCCCC
CCCTCCCGCAACAATGCTCTTCCCGATTTATGCCACACGAAAAAAGGTGC
TCCAACTCGCCGCACAGCTGGCCGGCCGGCTTGCCCGCGGCGAGGTGATG
TACCTGCACTGCTGGGGAGGGCACGGCCGCACGGGCACCGTGGTGTGCAT
CATGCTGCACCTCATGTACGGCCTCAGCGCTGACGAGGCCATGGAGCGTT
GCCAGCACGTGCACGACGTCCGGCGCATCCCGATAAGCGTGGGGTCCCCG
CAGACGGAGGCGCAGCGTCAGCAGGTGCGCCGCGTGATCGGGCGCGTCAT
CGCCCACCGCCGGTCTCTCGTGCCGTCTCCGCCGCCGGCAGCGGCGGCCA
CCTCTCCGGCACCGAAGCAGCACCAGCACCAGCACCAGCGGGAGTCGTCG
CCATCCAACGGCGGCGGCGGCGGCGGCGGCGGCGGCATCAGCGGTGCCGA
CCTCTCCCCGGAGAGCAGCAGGAAGAAGGAGGCCGGAGGAGGCGCCACGA
CCGCTGCTTCTGCTTCGACTACCGTGGGCGGTCGCCGAGCGTGGGTGCGG
GGGCGGCGGCAGGCGTTCGCCCAGGCGCCCAACGGCGTTGGCGAAGACGT
GTCCGGCTGGCTGGACGACGACAACGAAGCCGAAGGGGATGGGCTCAGCG
ACCTACAGCGTGGCAAGAAGCTCAAGGCGGGAGCGGGCCAGACCAGCGCC
CACCGCCGCCACCACCACCACCGCATGCCTTCCACGGTGTCGTCGGAGTC
GTTGCCGTCCTCGGTAGGCGTAGCGGCGGCGACGGCGGCGGCAACGGCGG
CGGCAGCGGCGTCGTCGTCGTCGTCGTCGATGCCGCGCCGAAAGTCGTTC
ACGGAGCCCTACTCGAAGGACGACCCGTCGCGAGGGACGAGGATGAGCCG
CGCGCGGCGCAAGTCGGCGCCGGGCAAGCCGCCGGCCGACGTACTTGCGG
CACGCGCTGCTGCTGCTGCTGCTGCTGCTGATGGCGCGTCGTCGTCGTCG
TCGTCGTCGGGCAAAGAGGACAAGGATGACGGTTGGACGAAGTCGCTACT
GTCGATCAGCCCCGCGAAGGGGATCAACTGCCGCCAGACGCCGTCGGTGG
CGGCGTGCTCGACGCCAGGGGATGATGCCGCGGCCGCCGCGTCCCCGGGT
TCGTGCACGGGGGTGGAGCGGTGCGTGACGAGGTCTAGCGGCGGCGGCGG
GGGAACCTCCTACCGCGCGAGGTGATAGGGGTCATGCCATGCTTGTCGCT
TCCGTCGGTGGATCCAATTTCCGTTCTTGGAATGGGAGGAACGTTGTAAC
GTTGCCGCCCCGCTGCACGGAGGCGCCGCCTAGGCTCAGGCAGTGAGTGG
CTTGGGCGCCAGCAGCGAGGGCAACAGGAACGTTGATCGAGTCGCGGGGA
AGGGGTGCGGCGGGAGCATCGGAACTCGTTTCGTTTCGGTGTTGCGGCGA
GACGGTACAGTCACGTGTACAGCAGCAACAACTACAGCTAGATACGAGAT
AGCGAGAGGTTGATGGTGGGTTCCCCACGGGCCGGACGGTCTTTCGCTTC
GTGGCGTTTATATATATATATTTTTTTTTTGTGATTGTGTTCTTTTTTTC
TCTTGTTTTTTTGTGGGGTGTGGTTTGGTTTACTCTCGCGGTTAAGTCAG
GCAAGGCAGTCACCGTTCGTCCTTGGAAGAGGGGCGCGGGCGAAGTGCTA
GGGAAAAGCGCAGAGCGACTGCAAGCGCAGAGCGACTGCAAGCGCAGAGC
GACTGCTACTGCTGTTGTGCTCCTTCGTCGTCGATGTCGTACAATACCTC
GTCTTTAGTTTGGGCGTTACAGCACCGCGCCGTCGGGGGGTGGATGCACT
TGTGGATGCCTATTTTCATTGATTCCATTTACTGGACGATTGGCGATACT
CGTGCGCGTTCGTTCGCCCGTGAACTTATTGTTGGAACAGCAGTGCTCTT
CGAAGTGGCTGTGTGTGGTTGTGGGTGTTTTTGTTCCCGAGAACGATGCG
CTTTTACCTTCCTTTTTTTTACAAGGGCGGGCAGCAGCAGCAGTTGACTC
CACGCATGTCGTAGCAAAAATAGCTCGCTGGTTTTCACGTGAGGATGGGC
GATGATTGTCGTTTCTGATGGAAGAATGGGTGGGGGATATTCCTGTACCC
ACACCATAACAGCGTAGAATGGGAGGTGTTTCGACTTTTTCTTGCTGGTG
CGGTGGGTAACGGCACGACTTTGGTGGGTGGTGATTATTACTTGCTGCCC
GACGACCCCCCGGGCGCTCTGCTTCTTGGTACACCCAGACCTACAGCAGC
AGCAGCAGCTCGTTCAGCCGCCTTGCTTGTGGTGCGGGATCTACGAGAGT
CTCGCCTTCAAGCCGACGCCTCTGTCCAAGCCTGCTCCTGCGGCCGAATC
CGGCGTGCCGTGCCTAACTGTGACGGGTGTTTGTTTTCTGTTCTGCTGCG
CCACCTTTTTTTGAATCTACGTCGTCTTTGTTTTGTCGCCTTTTTTTCTG
TTGTGCTTGTGTGCTTGTGTGTCCGGTTACTGGCGGCGATGGTTGAAGAA
AAACGGATGTTTCAACACGATCAAGGACGTCGTTAGGGGGGGGGACTGAA
ACACGCCTCTCCCCCGTAATTGCTGGTACACCTTTGACGACGAAAGTCGT
TGCGTGCCTGTGGTGTGATCTGTGTGCATGATCCATATGTTCTGCATGAA
TTATTGAGTACTGTGGGTGGTGTGGAGGTGAACTGCGTGGTTGATTGATT
TATGTTAAAGCTTGTCGTGCGACCGAGCAGATGTCCGGCGGACCATTTGC
AGTGGATCGGCCGTGACCCCGGGGGACACATCAAAAGAGTAGAATCTCCA
GCGCGTGGTGGGGGGGGA
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Coding sequence (CDS) from alignment at chr_00:11049823..11055840+

>Ec-00_007000.1 ID=Ec-00_007000.1|Name=Ec-00_007000.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1860bp|location=Sequence derived from alignment at chr_00:11049823..11055840+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGTTGCCAAAGTCAGCACCACAGGCAGCACCATCAGGAATGAGCGGCGG
GACGGCAGCAGTAGACGCAGAGGCAGCAGCAGCAGCAGCAGCAGCCAACA
TCATGACGAGACCGCTAGCTGCGCCCGAGATAGGTCCTCCCTCGACCGAT
GACGAGGAAGAGGAGGAGGACCAGTCCGACGTAGAGGAGGAGCAAGAGGA
GGAAGAAGTCGACGAGGGGCTGGTCGCAGCCGTTGAACTTTTGCTGGCGG
AGGTAGAGGCGCTGCGAAGGGCGAGCTCCTTCCCCGGCCTGGAGGCGCTG
TCCAGCATCGACAAGGCCGGGCGGTACCTCGGTCCCACCATGGAGTCGAA
CTGGGTGCTCCCGGGGCGTCTGCTCGTGGGCGCGTACCCGGCGTCCATGA
ACGACAGCCACCACGCCCACCTCCTCTGCACCATCCTGCTGCAGGGAGTC
TCGACCTTCGTGTGCCTGCAGCAGGAGTACCAGGCGGAGGGCGTGACGGA
GGAGATGTGGAGGTCGGGCGACGCGCTCAGGCCGTACTTCCAAGACGTGG
TGCAGCTGCTGGCGAAGCTCGGGGAGCTCAGGAGGGCAGACCCGAGGTCC
GTGCCCGCCATCTGCGCGCCGGAGGAGACCGACTTCGTGCACTTCCCGAT
CGTCGACTGCAACGTCGCCGACGATACCAAGGTGCTCCAACTCGCCGCAC
AGCTGGCCGGCCGGCTTGCCCGCGGCGAGGTGATGTACCTGCACTGCTGG
GGAGGGCACGGCCGCACGGGCACCGTGGTGTGCATCATGCTGCACCTCAT
GTACGGCCTCAGCGCTGACGAGGCCATGGAGCGTTGCCAGCACGTGCACG
ACGTCCGGCGCATCCCGATAAGCGTGGGGTCCCCGCAGACGGAGGCGCAG
CGTCAGCAGGTGCGCCGCGTGATCGGGCGCGTCATCGCCCACCGCCGGTC
TCTCGTGCCGTCTCCGCCGCCGGCAGCGGCGGCCACCTCTCCGGCACCGA
AGCAGCACCAGCACCAGCACCAGCGGGAGTCGTCGCCATCCAACGGCGGC
GGCGGCGGCGGCGGCGGCGGCATCAGCGGTGCCGACCTCTCCCCGGAGAG
CAGCAGGAAGAAGGAGGCCGGAGGAGGCGCCACGACCGCTGCTTCTGCTT
CGACTACCGTGGGCGGTCGCCGAGCGTGGGTGCGGGGGCGGCGGCAGGCG
TTCGCCCAGGCGCCCAACGGCGTTGGCGAAGACGTGTCCGGCTGGCTGGA
CGACGACAACGAAGCCGAAGGGGATGGGCTCAGCGACCTACAGCGTGGCA
AGAAGCTCAAGGCGGGAGCGGGCCAGACCAGCGCCCACCGCCGCCACCAC
CACCACCGCATGCCTTCCACGGTGTCGTCGGAGTCGTTGCCGTCCTCGGT
AGGCGTAGCGGCGGCGACGGCGGCGGCAACGGCGGCGGCAGCGGCGTCGT
CGTCGTCGTCGTCGATGCCGCGCCGAAAGTCGTTCACGGAGCCCTACTCG
AAGGACGACCCGTCGCGAGGGACGAGGATGAGCCGCGCGCGGCGCAAGTC
GGCGCCGGGCAAGCCGCCGGCCGACGTACTTGCGGCACGCGCTGCTGCTG
CTGCTGCTGCTGCTGATGGCGCGTCGTCGTCGTCGTCGTCGTCGGGCAAA
GAGGACAAGGATGACGGTTGGACGAAGTCGCTACTGTCGATCAGCCCCGC
GAAGGGGATCAACTGCCGCCAGACGCCGTCGGTGGCGGCGTGCTCGACGC
CAGGGGATGATGCCGCGGCCGCCGCGTCCCCGGGTTCGTGCACGGGGGTG
GAGCGGTGCGTGACGAGGTCTAGCGGCGGCGGCGGGGGAACCTCCTACCG
CGCGAGGTGA
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Synonyms
The feature 'Ec-00_007000.1' has the following synonyms
Synonym
Esi0529_0004
Esi_0529_0004