Ec-00_006930.3 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Ec-00_006930.3
Unique Name	Ec-00_006930.3
Type	mRNA
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	132

Homology

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BLAST of Ec-00_006930.3 vs. uniprot
Match: D7G3S4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3S4_ECTSI)

HSP 1 Score: 113 bits (282), Expect = 4.350e-25
Identity = 69/118 (58.47%), Postives = 76/118 (64.41%), Query Frame = 3

Query:  141 VKGAATKTPRVSQELEDVMQAIRELNIDRGSDLWETFRTSPNKKRDPWARRATRFLPFPGQSLEFFRPGQEGA---RCSSRRVASRQPPRGGQRFEGVDDATKKLTTATQGNDNSSAK 485
            +KGAATKTPRVSQELEDVMQAIRELNIDRGSDLWETFR    ++      +  +     G  L       + A   +     V SRQ    G  FEGVDDATKKLTTATQGNDNSSAK
Sbjct:    4 MKGAATKTPRVSQELEDVMQAIRELNIDRGSDLWETFRDISKQETRSLGPKGYKISAISGAELGVLPASAKKAHDVQADVWLVGSRQEAANG--FEGVDDATKKLTTATQGNDNSSAK 119

[Close]

BLAST of Ec-00_006930.3 vs. uniprot
Match: D7G8K7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8K7_ECTSI)

HSP 1 Score: 84.0 bits (206), Expect = 1.890e-15
Identity = 55/102 (53.92%), Postives = 63/102 (61.76%), Query Frame = 2

Query:  254 DISKQETRSLGPKGYKISAISGAELGVLPARPRRRTMFKPTCG*SAAAKRRPT-VRXXXXXXKEADDSDPRQRQLICEIAEEADLAGVVKRLTNLSFEETEK 556
            DISKQETRSLGPKGYKISAISGAELGVLPA  ++    +       + +             K+   +         +IAEEADLAGVVKRLTNLSFEETEK
Sbjct:    3 DISKQETRSLGPKGYKISAISGAELGVLPASAKKAHDVQADVWLVGSRQEAANGFEGVDDATKKLTTATQGNDNSSAKIAEEADLAGVVKRLTNLSFEETEK 104

The following BLAST results are available for this feature:

BLAST of Ec-00_006930.3 vs. uniprot

BLAST of Ec-00_006930.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7G3S4_ECTSI	4.350e-25	58.47	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7G8K7_ECTSI	1.890e-15	53.92	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_00	contig	chr_00:10982511..10997311 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Properties


Property Name	Value
Length	1556
Hectar predicted targeting category	signal anchor
Gene id	Ec-00_006930.3

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-00_006930	Ec-00_006930	Ectocarpus species7 Ec32 male_plus_femaleSDR	gene	chr_00 10982473..10997428 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_006930.3	Ec-00_006930.3	Ectocarpus species7 Ec32 male_plus_femaleSDR	polypeptide	chr_00 10996912..10997307 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_006930.3.1	Ec-00_006930.3.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 10982511..10982652 +
Ec-00_006930.3.2	Ec-00_006930.3.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 10987931..10988043 +
Ec-00_006930.3.3	Ec-00_006930.3.3	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 10991882..10991974 +
Ec-00_006930.3.4	Ec-00_006930.3.4	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 10992202..10992270 +
Ec-00_006930.3.5	Ec-00_006930.3.5	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 10992520..10992592 +
Ec-00_006930.3.6	Ec-00_006930.3.6	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 10993061..10993131 +
Ec-00_006930.3.7	Ec-00_006930.3.7	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 10994414..10994561 +
Ec-00_006930.3.8	Ec-00_006930.3.8	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 10996003..10996035 +
Ec-00_006930.3.9	Ec-00_006930.3.9	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 10996279..10996344 +
Ec-00_006930.3.10	Ec-00_006930.3.10	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 10996564..10997311 +

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_006930	5UTR:Ec-00_006930.3	Ectocarpus species7 Ec32 male_plus_femaleSDR	five_prime_UTR	chr_00 10982511..10982652 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_006930.3	CDS:Ec-00_006930.3	Ectocarpus species7 Ec32 male_plus_femaleSDR	CDS	chr_00 10996912..10997307 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_006930	3UTR:Ec-00_006930.3	Ectocarpus species7 Ec32 male_plus_femaleSDR	three_prime_UTR	chr_00 10997308..10997311 +

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at chr_00:10982511..10997311+
coding sequence from alignment at chr_00:10982511..10997311+

mRNA sequence

>Ec-00_006930.3 ID=Ec-00_006930.3|Name=Ec-00_006930.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=132bp
MYTTVRLPVLKRFVFFRGETCLRKFKLYTWLWCRRRVRYEMLYIDCFYHV
FPCGAVYMRALPALGCCMLVSSWHWLATAACCCFCCSRGLLLILFVIVRC
RCRRGPGFATALEDDHQNVVVRGVQLSRQVR*

spliced messenger RNA

>Ec-00_006930.3 ID=Ec-00_006930.3|Name=Ec-00_006930.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1556bp|location=Sequence derived from alignment at chr_00:10982511..10997311+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
GAAGGAGGCGGGCGAGAGGGTAGCGAGTGAACCTGGAAGACACAAGACTG
GGAGTGATCCACCACCACCTTCAGGACGGCTCCTGACTCGCGCTCGCCAA
GCTCTCGCAACAGCAGGGGAAAAAGGTGGGTGGATGCGGCAGATGAAGGG
TGCGGCGACAAAGACACCGCGAGTTTCTCAGGAGCTGGAGGACGTCATGC
AAGCCATCCGAGAACTCAACATCGACAGAGGGTCCGACCTATGGGAAACA
TTCAGGGACATCTCCAAACAAGAAACGAGATCCTTGGGCCCGAAGGGCTA
CAAGATTTCTGCCATTTCCGGGGCAGAGCTTGGAGTTCTTCCGGCCAGCG
CCAAGAAGGCGCACGATGTTCAAGCCGACGTGTGGCTAGTCGGCAGCCGC
CAAGAGGCGGCCAACGGATTCGAAGGCGTCGACGACGCCACAAAGAAGCT
GACGACAGCGACCCAAGGCAACGACAACTCATCTGCGAAAATCGCTGAGG
AGGCAGATTTGGCGGGAGTGGTGAAGAGGTTGACCAACCTCTCCTTCGAG
GAGACAGAAAAGGGAAGCCAGCGTGAAGACGCCAGCGATGACGAGGATGC
CGCCCTCACGGTAGCGGAAGTTGCCCAAGCAGCCGCCGCCCTGGCAGACG
CGGTAGCTGCCGCCGTCGCCGAGGCCGGTACCGGCAGCGGTTCCCCTGCG
GTCTGCCAGAATGACCACGACTACGAGTGGCTGTGCGCCCAGCTCGACAC
CCCGTGCTGGCGGGCGTCCACGTTAGCGGATTTCACGACCGATGGCCGCT
TGCCGGAATGGGGAGTCTCCGAGGCGACGTGAACGCTGAAATGCGGCGCT
CGACGCGGGCGGGAGGCGGCGGAGCAATCGGTGCCAGATGCGTCGATGGC
AACGATGTACTCTCTGTTGGAAGAGGAGGACAAGGAGGTCAAGAAGTACA
GCAGTGTAAATAGTCAAACGAATGTGGTGGATTTGTGAAAAGGTTCCGTT
CTGTATTGACGCGGGAATGGCTTCTACGCTACCTAGACGGCCAGATCGTT
GCCTCCTACGCCATACCACCGCAACGGCAACGCACTTGGCGCGCGATAAC
CGGCCGTGGTGTGACTGTGTTTATGTTTCCCGTTGATTGCCGCGGGTTTT
TCGATTATGTACACTACTGTAAGACTGCCTGTCTTAAAACGGTTCGTTTT
TTTTCGAGGTGAAACGTGCTTGCGAAAGTTCAAGTTATATACTTGGCTGT
GGTGTAGAAGACGAGTGCGCTACGAAATGCTCTACATAGATTGTTTTTAC
CACGTCTTCCCCTGTGGTGCAGTCTACATGCGTGCGCTTCCAGCTCTTGG
TTGCTGTATGCTCGTGTCATCCTGGCATTGGTTAGCTACAGCTGCGTGTT
GCTGCTTCTGTTGTTCGCGTGGTCTGCTGTTGATACTATTTGTCATCGTT
CGGTGTCGTTGTCGTCGTGGGCCAGGTTTTGCGACGGCCCTCGAGGACGA
TCACCAGAACGTAGTTGTGCGTGGTGTTCAATTATCTCGTCAGGTTCGAT
AGCAAG

protein sequence of Ec-00_006930.3

>Ec-00_006930.3 ID=Ec-00_006930.3|Name=Ec-00_006930.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=132bp
MYTTVRLPVLKRFVFFRGETCLRKFKLYTWLWCRRRVRYEMLYIDCFYHV
FPCGAVYMRALPALGCCMLVSSWHWLATAACCCFCCSRGLLLILFVIVRC
RCRRGPGFATALEDDHQNVVVRGVQLSRQVR*

mRNA from alignment at chr_00:10982511..10997311+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>Ec-00_006930.3 ID=Ec-00_006930.3|Name=Ec-00_006930.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=14801bp|location=Sequence derived from alignment at chr_00:10982511..10997311+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
GAAGGAGGCGGGCGAGAGGGTAGCGAGTGAACCTGGAAGACACAAGACTG
GGAGTGATCCACCACCACCTTCAGGACGGCTCCTGACTCGCGCTCGCCAA
GCTCTCGCAACAGCAGGGGAAAAAGGTGGGTGGATGCGGCAGGTGTGTGT
GTGGGTATTGTGCGGCGGTGGAGGACAACGGATCCAGTCAAGTACATGGG
TTCCCTTGACAGCGCCGTATGCGCGAAGAAAGCCGCGCCCCTGTGCACAG
CAGTAGCGTGGACGGAGAAAGCTCGTGGTGAGGTGATTGGAGAGAGGACC
AATCTTGTTGATTCGATCGCTAGAATGGTAGACTACATCAGCAGTGTTAC
TGTAGACTATAGTACACACACACACCACCCTCTCTTCTCTGGAAGACCTT
GCGTATTTTCTCGTCTACCAGATGAGGAAGTGAGAGCCTGATCGGTCCTC
AAGGCATGCTCTTGCTACTCCTAGCGTGGAATAGTCATAGTTCCGGCATG
GATGTGTGCCTTGGCGTGGTTTATCCCCCCCAGCTTTCAATGACGGCTTG
GAGTAGAGAGGCTGGAGCGCACAGCACCCGTCGGCGAAAGAGCTGCTGAG
GAGGTACATAAAACATGGTTGTTTTCCAGGCTCTCTCAAACGAAGAGTGG
GAAGGAATGCCAGTCTACAGATAAGAAGATGCTGGAGAGAACATCATTGA
ATACGAGTGATCCCACGTGCGTGTGGCACACACTGCTGCTGTACCGATTT
ACCGCCGAATTATGTATGTATGTTGCCAGAGGAAGAGTAGAAACACCGGT
AGATCTCACGACACTGCTGTGAATGTCATCGCTACAATTCATCCTACGAA
GACCTTCTCTCAAAATATTGACAACAGATTAATGAACTTTGCATGCATAC
ATGATACACTGCTCAGTCCGAATTTCGCATTTCGTACACCAGTGTTTTGT
TTCGCAGCAGATGTACTGTAGGTCTACAATAAATAGCTTACCCGTTCGGG
GCAATCAACGCCCCAATCAAACAGATGTGTTCAAGTATGCACTACAAGTG
CTGAGAAAAACCTGCTGGGTCTCGAAGTACTTACGTATGTAGTTGGGTCT
GTTTGAGCCGATACAAAGGAAGATCGGTGACGCCAGCCGGCACAAAAAAC
ATCCCCTGCCGGAAGCTGTTGGGTTAACGAAGTAACACGTCCTTGTTTGT
TTTTAACCCTTACGTGACTGGGTAAATTTGAATTTTTGGTTTTTTCTCCA
CAACTGGCTCTCTGCGGTTAAAGATCTTCAATTCATGCGTGTACACCCAC
AAATCACGGCGGCAAGGATGGTTCAGCAGTGAGTCCATGTGTGGGGCTCA
CAAGGATGGGGGCGCGAGTATATGTAAGGGTCACGCACAGGAGTACTACA
CTGCTGTACAGCAGTATCTCGTGTTCTATATATACTCACAGGATGGTCGT
CGTGTCGTGACACATTTCTTACTATTAGTACAATTTTATGGGGAAAAAAT
ATACTTCCAAGTGTATAACTGGATCGGCTCGATGTTTTTGGGGGGTACAG
CACTGTGGACCAGACATCGACCAAGAACGTTTGCCTACCGCGACGACCAT
GGGTGGACGGGATAACCCCTACGACGGCGAAGCATACTTCAATGCGATGC
TAACAACCGTGCGCGTGTGGTGCACTTGTCACATGATGCTGCCAACCAAC
AGATGCACGTATACGTGTCGCCATATTGTGGTCGCCGCGCAAAGAAATGC
CTTGGGAAGATCTCCTACCTGGCACTACTACAAGGAAACCGAAACGTAAC
GATGGACACGGCAATACGCACTCCATTGCCGTGACAGAGTTACTCCTATG
CTCGAGTCAAAGCGGAACACCTCCTGTCGACAAACGTTGCGGCACGCTGC
GGCAGTGTTCACGACTATTTGGGTGATGTCTTACACCTATTTCGAGTGCT
ACTATGGATCGTGCAGAACGTCGCGATATCTCTTTATGTGTACACTACCC
AGGGCTATGCAAGTACGTGAGTGCCCCCGCGTAGCTCCACGTATATATGT
GCTTCCTGACTTCTCAATCCATATCGCTGGGCGTGAAGTGATCTTGGTGC
GGCCCAGTACCGCCTACGCGTTTGGATTATGTCGTACACCTTTGTCGTGT
GTCGCTGTGGATCTTCCAGACCGTAGCGCCATCTCTTTGTGTCCATCAGC
AGTTTCACATATTTTGACTTCCTCTTCATTCATGCATATCGCCGGCATCA
ACGTTTCTTGGAGCTGCCCAGTACGACCTGCTGCTCTGCGCGTAACAGTA
CGAGGCAGTATCAGGAGCTACCTGCTGCTAACTGCTGCTGTCGACTATGC
TGCACTGCACGGCGTCTCTTCTTGGTTTCCAGCCGTCCAAACTTGAAGTA
CCACCAGTCGCAATTTCGGAGTTTTCAAAAACCAGTTTTGATTCATCATG
TTGATGGCCTTTTTTATCATCCCGTGGATCGAAGTCCGCTGGATCTTGAG
GAACTTGATAAATTGCTTTGCTTTGATGGGATTAGACCTATGATCCTTTT
TGGAACAGTTGCTGCTGGTTGGCCGGACCACTGCTCGGCTCTTTCTTTTA
CGTCTATATGCTTTATCGACTAATGGAGTACGGCCGTCTTCTTTCTTCTT
CTTGTTCTTCACTTCTTCCCACACCCTCACCGCCATCCGTCTGGTTGTGG
CCGCCCACCCCATTGGGGGGCGGGGGGCCAATTGTTCCCCCTAGTAGTAG
TTATGCGGAGAAAAAGAAATTTGCAGCAGCAATATTTCTAAGCAGGTGTG
GATGCCTGTCTCCGACAGCAGCCATCCGCACAGAGGATGTACCTGTCCAA
GCAAATACCTGTTGGCACATCTTCTCCGCCTCATCCTCGGACAGAGCATA
CGGCAAAAGGCGCGCATATGCTAGCAGCGCTAGATGCGAAGACGCTGACG
GGAAACCGCCTCACAGAAGCGCCCAGGATCGATGAAAAAAGTAATGACCC
ACTCAGAGAACCGAGACCATCACCCACTATCGCACATAATGCACACAAAA
AATCGATACATCTTACAATTCTGTACTAAAAATAGATGACAGTGATCGGA
GGTGTGATCGGAGGTGTATTCGTGAAGACCCTTTGCCTTTGAGCGAAAAG
TTGCACACAGCAGACGAACCTCCTTGACGCCCATTACTGGGAACCACACG
CACCGCAATCACAACAAACATCAAGCACCGAGCCAGTACATTCGCATCGG
CTCCGGTGTGCGTTTTCTCTACTCTCCCCCGCGGATGCGGCACCGGGTCG
ATCACATGTTGAGGGTGCTGTATGTACCCTCCGGTGGTATTTTGCGTTTG
AATCTTACAGTAGTACCGGTAGGCAGTAGATTGGATCTGGGAAGGATATC
TGCCCCATATCAGAGAGATTGGGCATGCATGGTGAATAGTATCGTACTGT
GTGTCCTGTGCGCATTGGTGGTACGCGTGCTTCTGGGGTGTGCTGCCTCT
GTGTCTCACTGCTTATCTCTATGTATGTTCTTCGCTCTTAAGCGAGGCCC
AACGGCGATCTTTCGGCACGCAAAGTGATCGGAGCTGAGAACGGAGCTAA
ATCGGCCTAGAGTCACATAAGGGTTAAGACAGCAAGCCTTCCTTGTTCCC
CGCACTCTACCGACTTCTTTATCAGTTTTCTTGTTTAAATTAGTACAGTG
ATAACGCCGGTATGTGCCCGGCGCATCGACCGGCGCTATTCAGGGCGACT
GGCGCTATTGGAATAGTGCCTCACTAGCGCCACAACCGGCGCTATTGAAG
ACTCAGAAACCCTCAATATCGCCGGTTGTGACACTATTGAGGGATTGTGG
TCATGTGGCGCAGCGATTGCGCTTTACTGAGCCAACAGATTCACCAATTG
AATGGGAACGATTGAGTGGTGAAGTGGGCGGACTGCAAAGGATAAATTAT
GTTCCGGGACTGCCAAATTTGTTGTGTTTTGTAACTGATCGTCTAGAAAG
ACGGCAGCATACTGATCCTCCTGCATCACAAATAGGCGCGGTGCAACCGG
ACGCGTTGCTGTTACAGGAAGGACACCGCGACAGCGGAATGACGACACAA
CTGCACCCAATGCACCATTGAAAGGAAAAGTTATTTGTAAAGAATCGTAC
AGCAGAAAAGAAAACATGTGGACGAGAAACGTGCAACCGCAATCAATCGC
CCCTCATCCATGTAGCGAGAAAGAACAAGAAACGACCGCGAAAGAAGCGC
CACATGTAGAAAATCAGACACCAAGCCCGCGATTCCGAGAAGAAGCAGCA
CAGAATAACGGCTTTTACTTCACCCCCGAGTTTTCTCTCCTCCTCATTCC
GCTTCAATAACTTCCGTCGCAACAAACTCCCTCAAGTTTCCTCAGGGCAG
GTGCGTGGTATGTGTTTGTGTGTGTGTCAACAATACGAAAAACGCGCTAT
TGCCGGGTGTAGCGGAGCCCAACCCGGCGCTATTGCGGGCGTCCCTCAAT
AGCGCCAGAAGCCCAAACCGGCGCTATTGCGGGCGTTCCTCAATAACGCC
AGTCTGGCGCTATTGAGGGCTCTGGCTGTGCCCTGAAATTTCACCGCCGC
AAAAGAGCCCCCCCCCTATCACAATTTCATCTTATACTACTATTCCTATA
TTGCTTGTTTGCTTGTTTAGGTTTTGACCAGGAAACCTTAAGAATGGTGT
GCTTTCATTGTACTTGGAAGCGTTGAATTGAAAAAGAATGGTCTTCGGCA
GGACATGTCCATAGGCGAATGCCCAATTTTCCATTCCATGTTGTAAGCTT
ACGAGTACATCTATTTAGCATCTTACAGTCCCCCTACTCGTATGTACCGA
CGAAGTGATACGACCAGTTGATTGGAAGCCACCTTACACGCGTATTATTC
TTTCTCCCGAGACAAAACGAGATGTACCTGCAAATGTCCAGGCGCTCTCA
AACATTTTTCTATTAAAGAAGGATTTGTTATGGTCCATCGTTCTCTCTCG
ATTCTATTACACACCGAAATTGTATTCGCAATACACCGAGCTGCCCGCCT
GAGGCGAATTTCTTTGAACTTGATAGTTGTCGCGAGTACACACCACAAAA
GAGGAAAGACTGCTGAACGAATGAATCTTTCTTGCGTCAAACACTGTAGG
CAAGCATCGCAGGAGGAAAGATGGACAGGTGAGACATTTCCTCCCTTGCG
GCCCCGGTTGGTGCATCGAGCTTATACCGAACGGTGTAGACCAGAATAGA
CGGGAAGGGAACAACACCAGCATAAACCCCTTCCAAAAGGCCAACCTCGA
GTACGCTTTCGTTAGTCTACGGGCACTAACTAAATGCTCAGGCACGTTGT
TTCACTTAAGTGTTCTACCCACTAAACGAGTAGACCCGCCCCCCCCTGAT
GACATGCCACCACCTGCTAGATGAAGGGTGCGGCGACAAAGACACCGCGA
GTTTCTCAGGAGCTGGAGGACGTCATGCAAGCCATCCGAGAACTCAACAT
CGACAGAGGGTCCGACCTATGGGAAACATTCAGGCAAGGAATGTTTGCTG
CAGGCTCACCTCGCCACACCTCGCCACCCCTGCCGTTACATCTCTCTTGC
TGTTGCTCCAGGAGGCCACCATCACTCCTACAGCGGCCGAAGAGGAAGTC
ATCTGCCTTCACCCGCAGCTGGCTGGGTAAGTTTGCTGCTGTTCGAGTGG
CCCTTGGAAACGTGTGGCTCCCCCTCCCGACTGAGACGCGCGTTCTTGCA
CCATGGCCAATACTTTGCCCTCTGCCCCACCCACCAAAAGCCTAACATCT
CTTCTTCCCCGTGCTTGCTGATCTGACCTTGCCCCGTGGAATTCAATGTC
GTTACACACGTTGTGTGAGGCCGACTTCCACTAGGACTTCCCCGAGGAGC
ATGCACACGAATCTGTCGAGAGTTGTACGTAATTTTCAGCTTTCCTATGT
TGTGGGGGTGTTGGGGGATATTTCCCCTACCTTGAACTGAAGTACGGCGT
AAAGGGGGGCCACCATACGATATGCTTGAAAGGAAAGCCCTGATCCCATG
TGCAATACTACCCTTGTAGGGGCCCACACACAAGCACTTCCCAACGTCCC
CCTTGAGCCCAACGGCCCCCATGCGCTCTGCCGAGAATCTCATCTCAAGA
AACGATCTTCGTGGGATTGTCTCTTCGGGCGTGTTGATGTTGTGCATCAA
TATTGCCTGGGGAATCGTGTTTCGATTTCCGCTTTGAGAGCAGCAGACCA
CGCATGGGTCGCCTTTGTGGGCTGGTCGAAGAACCAGTAGTCTTGTTGCG
CCTGCCTTTCAGCTCCGCTTCTTTCCACCAAGACTGCTTCTGCCAAACAT
GTGGCGCTTCTATCAGAGACAAGGCACCTTATTCAGGATAGAGAGAGACG
AGGGCGGCACTTGTGGCACGAACCTAAAGCCCAAGTTCAACTAGTGCGTG
TGCCGCTGCCTCAGTTGTAGCATCTTAGAGATTATCGAGTCGCCAGACCA
CTCCCTTGCACGAACGCCTGGTGTGTAAGGGCACGTAGTAGTCATGTTTT
GCACACCGTAGTGGTTAGACCATTGGCTGTAACGGGGCGCGGTATATGGT
TTGTAGAGTATCCCAACAACGAGTTGTCTGGCAAAGTGTCGGCCCGTCCG
TGTAGCGACGGGTTTTAAGGACAGGGCATGCTATGTATCTCGTAGCTAAG
TATGATGTGCGTGGTCAATCTCGCTATATCTCTGTGCAGCAGTTGTATTG
TGTACCCGGCTTCCATGTGTATCTTCAGGGCGTGAAGTAGAGTTGAACTT
GTCGGCGGGAGTCCAGACGGGACTCCCTCTCCAGCTTCGTATGGCGTTGG
GGATAGCTCGATGTTGGATTATTTTCGACGCAGTGGCATCCCTGTAGTGC
GTGATGTGTCCGTTTCACCTTCTAAACCGGAGCGATGGGCTCTAGGCTAC
GGTCTAGTTCGATGAACGTTGGTGCCCTTTCGTGTGCCCTCGGACGTGTT
GTTCAGGAGATAGTTTGCCGTCGCGAGTCGTAATCCTGGCCGTATTTTTC
CATATTTTGCACTCATATTTCCTGTCTGCCTTGTACTACAGCTACCTTCC
TTCTTTCCTTCCTACATGTTTCGAAGTATGTAAGACTTCCCGAAGTATAC
GTAGATGAATACTGTTGAGAGCAGATGGTACATGTTTTGAGGTGGACCTG
TTGGGGTGATGCAGGGTATTCATTTTTCCTTGTTCGTTATGCCTTTGACC
TATGTACGATAGGACTCCAGAAGCCGTTTATTGGTGCATATGTTGAGATT
TCCAGTTTGCCTTGTAGTTGCTGCCTAGTCTTAATCTCCCACCGTGGTAC
GTAATTTTCATCTTGCCTATCTTGTGGGGGTGTTGGGGGATATTTCCCCT
ACCTTGAACTGAAGTACGGCGTAAAGGGGGGCCACCATACGATATGCTTG
AAAGGAAAGCCCTGATCCCATGTGCAATACTACCCTTGTAGGGGCCCACA
CACAAGCACTTCCCCATGTCCCCCTTGAGCCCAACGGCCCCCATGCGCTC
TGCCGAGAATCTCATCTCAAGAAACGATCTTCGTGGGATTGTCTCTTCGG
GCGTGTTGATGTTGTGCATCAATATTGCCTGGGGAATCGTGTTTCGATTT
CCGCTTTGAGAGCAGCAGACCACGCATGGGTCGCCTTTGTGGGCTGGTCG
AAGAACGAGTAGTCTTGTTGCGCCTGCCTTTCAGCTCCGCTTCTTTCCAC
CAAGACTGCTTCTGCCAAACATGTGGCGCTTCTATCAGAGACAAGGCACC
TTATTCAGGATAGAGAGAGACGAGGGCGGCACTTGTGGCACGAACCTAAA
GCCCAAGTTCAACTAGTGCGTGTGCCGCTGCCTCAGTTGTAGCATCTTAG
AGATTATCGAGTCGCCCAGACCACTCCCTTGCACTAACGCCTGGTGTGTA
AGGGCACGTAGTAGTCATGTTTTGCACACCGTAGTGGTTAGACCATTGGC
TGTAAGGGGGCGCGGTATATGGTTTGTGGAGTATCCCAACAACGAGTTGT
CTGGCAAAGTGTCGGCCCGTCCGTGTAGCGACGGGTTTTTAAGGACAGGG
CATGCTATGTATCTCGTAAGTATGATGTGCGTGGTCAATCTTGTTACATC
TCTGTGCAGCAGTTGTATTGTGTACCCGGCTCCCATATGTACCTTCAGGG
CGTGGAGTAGAGTTGGGCTTGTCGGCGGGAGTCCAGACGGGACTCCCTCT
CCAGCTTCGTATGGCGTTGAGGATAGCTCGATGTTGGATTATTTTCGACG
CAGTGGCATCCCTGTAGTGCGTGATGTGTCCGTTTCACCTTCTAAACCGG
AGCGATGGGCTCTAGGCTACGGTCTAGGACGATGAACGTCGTCCTCGGTC
GGAAATTGTTTTTCTTGTTTGTTGGTCTGTTTTTCAGGAGTTGGTTGCCT
TCGCCGGTCGTGGGGCTTCATTCGGCCGTGTTTTTCAGTGGTTCACGCAT
TGCTTGGATGTGGTTCGACCCTCACCACGGAAATGAAATCCTTGGCCTCG
GAGCAGTGTTGGAAATTGTAGATCACGGGTCATGGGGGCCAATGCCTTTT
TCGATATGAGACTCGCAAGTGGCGATGTGCTCACACGATCCGATCAAGAA
ACCTCGATCATCAGAAGGTTTGAATGTATGTAATACAGGTCTGCATTGCT
TGTTTTCTTGTTTTGTCGGCGTCAAAGCAGATTTTGTCGCAGGTCTGGCG
CATCGAAATAGACAACATAAACAAGCCTCCCTCGTTCGCTGTCGCCCGCT
GATATCCTTGTTCAGGGCGATGTTAGTGCTGCCTGCCGTTCTTTGCGGCC
TTGCAGTTTCTCGACTCATATTGATCGAACGTAGTCGGCGCCAATATTTC
TGATGCTGATCATATGGAATCTGTCAGGTTGACGCTGCTCCTCAGTCATT
ATTGTTCGTGCATGTATGCAATGGGGCTGTACCCGGTCCTCTCTTTCCTG
CTAACTAGGTGCAGGGTCGTGTTTCGATCTAGCTACGTGTTTTTCCTCTC
GCCGTAACGAAGCTGGCACCCTCTCACTGTCCTTCCCGATTGTTGTCGCC
TCGTTCAACATGAGACGAACTGTTAGTGAAGCCTTTTCATGGCAGTGATG
ATCCCGTACAGTTCATGACGCCAACCCTAGTGATGCTGCCGATGCTGCTT
ATACTGCCGATGCGATTGATGTCGATGTCGATGCCGATGCTGATAGTCGT
GACGACGATGACGATGCTGCTCGGAAGGAGCCAGCAACTGGTACACACCG
TACCTGTTGCTGACCTTGCAGTGTTGTGTTGTTCCTGTTTTGCCCCCTTT
GCCATGCTATCTTACCCGCAGGGACATCTCCAAACAAGAAACGAGATCCT
TGGGCCCGAAGGGCTACAAGATTTCTGCCATTTCCGGGGCAGAGCTTGGA
GTTCTTCCGGCCAGGTGAGTACTATAAGTATATAGTCCAGAGAAACGGGT
TCATTCATCGACTGACTCCCGACAACGTGTACAATGCTTGAGCTGTTGAT
CAACAAACAGCTCTTCATGTTCCGCTCAGCTGTTTCGCTGGAGCTTGAGC
TGATGGCTAGCTCCCGCCGTCGACGTTTCATCTCGCCGTTGCCATTGGCC
GCATCCTTCTCGTTGATGCCGCCGTTACTCGCGAACTGCAGCGCCAAGAA
GGCGCACGATGTTCAAGCCGACGTGTGGCTAGTCGGCAGCCGCCAAGAGG
CGGCCAACGGGTACGTCACGGGTTTTGCTTCCTTTCGCGATCGCCTGACA
TCATGCATGTGGTGTGTTTTTTTGTCATGGACGCCCGTGTACGCGCCGCT
CTTTAGTCTCCCTGTATAGAGAGTTCGTAAGCCGCGGTCCCGCCGCAGTT
GCAGCGCAAAGGCTGGGTACTTTGTTGATACGTGCTGTTACCATTTGAAT
ACCTCGGCATAGTCTACAAGTCACGGGTCGATTATCTGATCTGACTTCAC
CTTCCTCAGATTCGAAGGCGTCGACGACGCCACAAAGAAGCTGACGACAG
CGACCCAAGGCAACGACAACTCATCTGCGAAAGTAAGTGACATCGGGCTG
ACGCGGTACACACGGAGGTGTGACTGCATACTGCTAACTGCCGTGTGCAC
ATGTTTGCTGTGATACGGCAAGATCTCCGGAATGAATTAGCTGCGGTCAG
GCCACTACCAGACAAACACACAAGGTACGGCTCTCGCACTTGGCCCCGTA
TTTTCCTTCTACAGTAATAAACCTGTCCCCAACCCGTTCAAATGTTGCCG
TTGCCTCCTGTGGGCTGGCATCAGGAGAGGAAGAGAATGCTGTTCGGCTC
GACCCCGGTCTAGACCAGGCCGTGCCGCACGCGTTGAGTCTCCGGTGTAC
GAATTCCTTGTCAAGGGCAAATCCTAAAGTGCGCTTTCGGGAGGCTGTCG
ATGCTTGCTGAAGATCGCTGTTTCATTTGGGTGTTCACCTTCCAAACCAG
CAGTAAGAAGCCCTCTTTCCCCATGACATGCCACCGCTTGCCCGATGCAG
ATCGCTGAGGAGGCAGATTTGGCGGGAGTGGTGAAGAGGTTGACCAACCT
CTCCTTCGAGGAGACAGAAAAGTGAGGGAGTTTGATACAGGCGTAACCCC
CCCCCCCCCGGCGTTCCATCTCTCTTGCCGTTGTTTTAGAAGGCCACCAG
TACTCCTGCGGAGGCCGGCGAGGAAGTCATCTGCCTTCACCCGGAGCTGG
TTGATTTCATTTTCTGGTGTACGTGCTGGCCCACGCAACCCCTGTCTCCC
CTCGATTGACAAACACGATCTCGTGTCATGGCCACTATTCTGCCCTCCAT
CCTACCCACCACATCAACAACATGTGACTTCCCCGTACATAAACGCTGTT
CTGACCTTGCAGAGCTCGTGGCATTGGATGTCGTTTTCATTGCTGGGTTG
TCAGTTCTCGCGTCTTTCGTTGTTGCCCACAGACCCACCCAGAAAGAAAT
GTAAGGAGACAAAGGCAACGGCAGTTGGCGCCCAAGGCATTCTCCCACTC
GCGCAATGTCAACGGAACCCAACACACACTTGTCTAGATGCAGAGAAAAC
ATGCCGGCTGGCGCAAAGAGCGGAACAGGAAGACAGTCCTTCCCTCAGAA
ATGGAGGTGTTTCCTACGACAAGATGTACCCGATCACGCTCGTCTCCCCG
TTTTGCTTCGCGTAGATATGGAGGAAATGGAGAGGGATACAGATATTTTC
CGATAGTTGGTGCGCCCGCCGTCCCACCTGTTCACCCTTGTTCAAGGGCG
ATGTCGATGCTGTCTATCTGGCGCTGTAGAATATCCGCTCAGTCTTAAGC
GAATGAAGTTCGATGCCAGTGTTTCTGGTGATGATCTTACATATTCAATA
TTTATTTAGGGTTACCTGAAATCAGGTTATCCCGCGCCTCTCTTCCTGCC
AACTGGTAGGTTTTCGGTCGTCTTTCGACCTGACTAGGAGCTGTTCTGCC
AACCTCTCAACGTAACGGAGCTGGTGCCCCCGTCTTGTGTTTCCCCGGTT
GTTATCAGTAACTCGTTGATGATGAGATGAAACTGCAAGTAGGGATGACA
TTCACAGCCGTAGTGACCGGTCCTGTGCTGCCCATGATGCGTTTGGTACT
ATGCGCCTGATGCTGCCGACGTGATTCATGCCGATTCCGATGCCGACGCC
AATGCCAATGCCGATGCCGATGGCGATGCTGATGCTGATCGGGCTGTTGA
CGGTGGCGGGAATGAGCCATCGTACCGGCACCTTTTTTCTGACTCTGCAT
AGCTGTGGTGCTCCGCTATCGCTGCCGAAACCTCAACATCAATCAACGAT
ACGATACAGTAAACCTTGTGTATTTCCCATGTCTCGGTCTTGGTGATGAA
CAGGGGAAGCCAGCGTGAAGACGCCAGCGATGACGAGGATGCCGCCCTCA
CGGTAGCGGAAGTTGCCCAAGCAGCCGCCGCCCTGGCAGACGCGGTAGCT
GCCGCCGTCGCCGAGGCCGGTACCGGCAGCGGTTCCCCTGCGGTCTGCCA
GGTATAATCGATGAGTGGCGTGTTCCTGCGTTGGTCACGCCCAGCTACCA
CTGTCAAGCAGTTGTTCCGCGATGCACGTTTGAACCCTTACGTCAACTCT
TGCAAGACGTGTCCCGCTTGAATGGCACAGTATCCCTGCCCACGGCTTGA
ACTCTCGTGTGAAGAATATCCCCACGCCCTACGTCGAATGGTGTATTCAT
GCCGTCTACACAATCTCTGGCATTGGCAAATGTTATTGCGGCGGTTAGTC
GGGGAGAAATGCGGACTGGTCCGTTGGTGTCTCGATTGGTGCATGTTCTC
AACGGAAACGAACTGCTGATGGTTGTAGCATCCGTAGCTACGGAGATACG
GTTAACCCGATGCAAAGAGAGTGATACGCTGTTGTGGCGTTTGTGATTTA
GGGACCCGTACCAACGAAGTTGGCTGATACAGGCAGCTATGGATGACATA
CCAGCGTAGAAAAGTGTACGCAGTACATGCTGCGGGTCCTACGCCAGGCT
CCACCGCTTGGCTCTGAATATACCATGTCTCCAAACAACCTCTCCTCCAC
CCGTTTAACCAAATATTTCACATTGCTGTGGACTGGCATGAGGAGAGGAA
GAGAGCGCCGTTCGGCTTGGCCCCGTGAGAATCAGACGACCACGGTTGCA
ACTATATTGTAGCGTGGGGGAGGTGAACTTCCTTCCGTGCGCAGAGCCTC
ACCTATTTTCATGAGGGATGGCTTCAACGTTCATCCGTACTTCAACTCCC
CCAAGCCGTGAATCTAGCCGTCGTCGTCCGACTCTTGCGGGGCCCGTGCT
CTGGGGCCAAACTGTTGCTCGTTCTTCTTCCCCCCCCCCATTTGCTTCAG
GTTTTCGTGGTTTCTGTATCTCTATGACCTCGCCTCTCTAGATGAAGAGC
CCCGATCCCGAACATAGCGCTCACAGCAACTGCATGAGCCGTACAGTAGG
TTTTCTACTATTACATGTTGCTCAGTTCAGCTTCAGGTCACATGTTGGGC
AAGTGAGTGGGGCATTCAAGAGGTGGGGAACTCCGTTCGTTCCAATGGGT
ATTTCGTCGTTGTCAAGGAAGCGCTTCTCCGAGAGCATGCAGCTACATGC
ACTAGAGAAGCATGAGACGTGACATCTTGCATCCCGCTACCTACTTCATA
CTCGTTTTACCCCACACTACCGAAAGGTTCAGTTCGGCAAGGTACGGGAA
CGTTTGCCCAACCAAGGGTATGGGAAATATCATCGAATCGGAAATGAAGC
AGGGAAGATCAAAGAGTAGTCTGACAACGGGCTTCGCGAGAACGTCAACG
CGAAATATCAGGAGCGGGTAAGGATCAGGCCCGTGGTGAATCTTAATCTT
GCACCGTCCAACCCGCATTTTTGATGGCGCGCATTCTCCGACCTTCCCCT
CCACACCCCCCACGCTCGATTTCTTGCACATGCCGGTACAAGAATGACCA
CGACTACGAGTGGCTGTGCGCCCAGGTAGGTGACATATGGGTCTGGATAG
ACTGCCTCATGCCTGGTACATACAGTTTGGCGAGGGAACCAAATGGCAAT
TCTTTGGCGGCCGTCGAGGTTGGCATCGTTCTCACTTCATGCAAAGTTTG
GCGCCAACAAGATGCATTGTTCTGGCATTGGAGATATCTGTTCATCGTGA
ATGACCCATTCCGTATCTGCCCTGTATGCTTGTGCCCCTTGCTTGTGCAA
TGACGACTGGACTCGAAGCTCGACACCCCGTGCTGGCGGGCGTCCACGTT
AGCGGATTTCACGACCGATGGCCGCTTGCCGGAAGTAAGTTTGGGCATGG
GAGCAAAGAACCAGACGACTTGCGGATGTTGTTCAGCCCCATTCGCGCTG
TTTCGTGTTGCCCAGATCGACTACCGCGGATGCTTTGTTTTGTGGTCAGA
TTGCGGCCGAACAGAGCCTTTTATCCTCTCCATATCCTACAGACTAACGA
GGCCCTTTTACCCCCCGCCGGACCTTTGCCCACTGCGCTTTATCATCGAA
AAGTGGGGAGTCTCCGAGGCGACGTGAACGCTGAAATGCGGCGCTCGACG
CGGGCGGGAGGCGGCGGAGCAATCGGTGCCAGATGCGTCGATGGCAACGA
TGTACTCTCTGTTGGAAGAGGAGGACAAGGAGGTCAAGAAGTACAGCAGT
GTAAATAGTCAAACGAATGTGGTGGATTTGTGAAAAGGTTCCGTTCTGTA
TTGACGCGGGAATGGCTTCTACGCTACCTAGACGGCCAGATCGTTGCCTC
CTACGCCATACCACCGCAACGGCAACGCACTTGGCGCGCGATAACCGGCC
GTGGTGTGACTGTGTTTATGTTTCCCGTTGATTGCCGCGGGTTTTTCGAT
TATGTACACTACTGTAAGACTGCCTGTCTTAAAACGGTTCGTTTTTTTTC
GAGGTGAAACGTGCTTGCGAAAGTTCAAGTTATATACTTGGCTGTGGTGT
AGAAGACGAGTGCGCTACGAAATGCTCTACATAGATTGTTTTTACCACGT
CTTCCCCTGTGGTGCAGTCTACATGCGTGCGCTTCCAGCTCTTGGTTGCT
GTATGCTCGTGTCATCCTGGCATTGGTTAGCTACAGCTGCGTGTTGCTGC
TTCTGTTGTTCGCGTGGTCTGCTGTTGATACTATTTGTCATCGTTCGGTG
TCGTTGTCGTCGTGGGCCAGGTTTTGCGACGGCCCTCGAGGACGATCACC
AGAACGTAGTTGTGCGTGGTGTTCAATTATCTCGTCAGGTTCGATAGCAA
G

Coding sequence (CDS) from alignment at chr_00:10982511..10997311+

>Ec-00_006930.3 ID=Ec-00_006930.3|Name=Ec-00_006930.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=396bp|location=Sequence derived from alignment at chr_00:10982511..10997311+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGTACACTACTGTAAGACTGCCTGTCTTAAAACGGTTCGTTTTTTTTCG
AGGTGAAACGTGCTTGCGAAAGTTCAAGTTATATACTTGGCTGTGGTGTA
GAAGACGAGTGCGCTACGAAATGCTCTACATAGATTGTTTTTACCACGTC
TTCCCCTGTGGTGCAGTCTACATGCGTGCGCTTCCAGCTCTTGGTTGCTG
TATGCTCGTGTCATCCTGGCATTGGTTAGCTACAGCTGCGTGTTGCTGCT
TCTGTTGTTCGCGTGGTCTGCTGTTGATACTATTTGTCATCGTTCGGTGT
CGTTGTCGTCGTGGGCCAGGTTTTGCGACGGCCCTCGAGGACGATCACCA
GAACGTAGTTGTGCGTGGTGTTCAATTATCTCGTCAGGTTCGATAG

Synonyms

The feature 'Ec-00_006930.3' has the following synonyms


Synonym
Esi0526_0001
Esi_0526_0001