Ec-00_006920.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_006920.1
Unique NameEc-00_006920.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length261
Homology
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BLAST of Ec-00_006920.1 vs. uniprot
Match: D7G6M3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6M3_ECTSI)

HSP 1 Score: 476 bits (1225), Expect = 1.630e-168
Identity = 236/237 (99.58%), Postives = 237/237 (100.00%), Query Frame = 1 
Query:    1 MDLFCRLMGDLQKGCTAVVHFPATDGEPAYVVKVFLRGGLLLLVADSPQRALMCYCKHPNSFSRFPCMYCMVEQTQDNEGGDLGDQLYDIVANRRTRGLMLEGRSQLEALASNPVQQGQLSSALGVVAPQEGDVWLLFEACDIVPSRVTPVESLHADALNAQALVQKYLIALLNTKGRELISATMRQRKGNNLYPPGAEPLKDPVADYSSLTGSDKWLLASIVLLVFRAVFHTTATM 711
            MDLFCRLMGDLQKGCTAVVHFPATDGEPAYVVKVFLRGGLLLLVADSPQRALMCYCKHPNSFSRFPCMYCMVEQTQDNEGGDLGDQLYDIVANRRTRGLMLEGRSQLEALASNPVQQGQLSSALGVVAPQEGDVWLLFEACDIVPSRVTPVESLHADALNAQALVQKYLIALLNTKGRELISATMRQR+GNNLYPPGAEPLKDPVADYSSLTGSDKWLLASIVLLVFRAVFHTTATM
Sbjct:    1 MDLFCRLMGDLQKGCTAVVHFPATDGEPAYVVKVFLRGGLLLLVADSPQRALMCYCKHPNSFSRFPCMYCMVEQTQDNEGGDLGDQLYDIVANRRTRGLMLEGRSQLEALASNPVQQGQLSSALGVVAPQEGDVWLLFEACDIVPSRVTPVESLHADALNAQALVQKYLIALLNTKGRELISATMRQRRGNNLYPPGAEPLKDPVADYSSLTGSDKWLLASIVLLVFRAVFHTTATM 237
[Close]
BLAST of Ec-00_006920.1 vs. uniprot
Match: A0A6H5KSU0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSU0_9PHAE)

HSP 1 Score: 343 bits (881), Expect = 5.500e-109
Identity = 180/214 (84.11%), Postives = 184/214 (85.98%), Query Frame = 1 
Query:    1 MDLFCRLMGDLQKGCTAVVHFPATDGEPAYVVKVFLRGGLLLLVADSPQRALMCYCKHPNSFSRFPCMYCMVEQTQDNEGGDLGDQLYDIVANRRTRGLMLEGRSQLEALASNPVQQGQLSSALGVVAPQEGDVWLLFEACDIVPSRVTPVESLHADALNAQALVQKYLIALLNTKGRELISATMRQRKGNNLYPPGAEPLKDPVADYSSLTGS 642
            MDLFCRL GDLQKGCTAVVHFPATDGEPAYVVKVFLRGGLL+LVADSPQRALMCYCKHPNSFSR                G +GDQLYDIV NRRTRGLMLE RS+LEALASNPV+QG LSSALGVVAPQEGDVW LFEA DIVPSRVTPVESLHADAL   ALVQKYLIAL NTK RELISATMR RKGNNLYPPGAEPLKDPV DYSSLTGS
Sbjct:  381 MDLFCRLTGDLQKGCTAVVHFPATDGEPAYVVKVFLRGGLLVLVADSPQRALMCYCKHPNSFSR---------------RGPVGDQLYDIVTNRRTRGLMLEERSKLEALASNPVRQGHLSSALGVVAPQEGDVWPLFEAMDIVPSRVTPVESLHADAL---ALVQKYLIALQNTKRRELISATMRHRKGNNLYPPGAEPLKDPVTDYSSLTGS 576
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BLAST of Ec-00_006920.1 vs. uniprot
Match: D7G6T4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6T4_ECTSI)

HSP 1 Score: 293 bits (751), Expect = 4.480e-91
Identity = 155/246 (63.01%), Postives = 185/246 (75.20%), Query Frame = 1 
Query:    1 MDLFCRLMGDLQKGCTAVVHFPATDGEPAYVVKVFLRGGLLLLVADSPQRALMCYCKHPNSFSRFPCMYCMVEQTQDNEG-------GDLGDQLYDIVANRRTRGLMLEGRSQLEALASNPVQQGQLSSALGVVAPQEGDV-WLLFEACDIVPSRVTPVESLHADALNAQALVQKYLIALLNTKGRELISATMRQRKG-NNLYPPGAEPLKDPVADYSSLTGSDKWLLASIVLLVFRAVFHTTATM 711
            M+L C++MG+LQKGC A+V  PA DG PA+ +KVFLRGGLLLLVADSPQRALM   KHPN  +RFPC+YCMVEQTQD EG       G LGDQLYDI +N RTRG +L  R +L  L      Q + S+ALGVVAP   D  WLL++  DIVP R  PVE LHADALNAQ LVQ++ I LLNT+GR LISAT+RQR+G +++YP G  PLKD V DY+SLTGS+KWLLASI+LLVFR V H+ A++
Sbjct:  505 MELQCQVMGELQKGCIAIVEMPAVDGAPAHRLKVFLRGGLLLLVADSPQRALMYKGKHPNKSTRFPCIYCMVEQTQDAEGEEGTDPGGPLGDQLYDIESNARTRGGLLAARRRLLELKDQASVQAKESTALGVVAPARADERWLLYDVMDIVPGRTMPVEILHADALNAQGLVQRFFIGLLNTEGRRLISATLRQREGGSSIYPVGEAPLKDIVTDYASLTGSNKWLLASIMLLVFRPVLHSAASL 750
[Close]
BLAST of Ec-00_006920.1 vs. uniprot
Match: D7G2D4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2D4_ECTSI)

HSP 1 Score: 206 bits (523), Expect = 9.010e-60
Identity = 117/233 (50.21%), Postives = 150/233 (64.38%), Query Frame = 1 
Query:    1 MDLFCRLMGDLQKGCTAVVHFPATDGEPAYVVKVFLRGGLLLLVADSPQRALMCYCKHPNSFSRFPCMYCMVEQTQDNEGGDLGDQLYDIVANRRTRGLMLEGRSQLEALASNPVQQGQLSSALGVVAPQEGDVWL-LFEACDIVPSRVTPVESLHADALNAQALVQKYLIALLNTKGRELISATMRQRKGNNLYPPGAEPLKDPVADYSSLTGSDKWLLASIVLLVFRAVFH 696
            + L C ++G LQ+GC         DG   Y+ +VF+RGGLL+   D P RA     K  N FSRFPC YCMVEQ  D  GGDLGD  YD+ ANRRT G + EG + L++L+ +P +Q + S  LG+VAP    + L L++A  IVP+   PVE LH DAL +  L Q +L+ +L+T+GR L+SA M Q   + LYP G E LKD V++YSSLTGSDKW L SI+LLVFR VF 
Sbjct:  191 IGLQCEILGLLQQGCLGECMLTEDDGT-TYLQEVFVRGGLLMWCGDGPGRAKNLGSKACNHFSRFPCPYCMVEQRDDAFGGDLGDAQYDLDANRRTWGGITEGFATLQSLSDDPSEQSRRSMELGLVAPDGTGLPLPLYDAMLIVPTEAVPVERLHFDALGSCQLCQVFLLEMLSTRGRRLVSAVMSQTP-SLLYPAGTERLKDMVSNYSSLTGSDKWTLQSIMLLVFRPVFQ 421
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BLAST of Ec-00_006920.1 vs. uniprot
Match: A0A6H5KLQ7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLQ7_9PHAE)

HSP 1 Score: 197 bits (501), Expect = 1.940e-54
Identity = 112/231 (48.48%), Postives = 143/231 (61.90%), Query Frame = 1 
Query:    7 LFCRLMGDLQKGCTAVVHFPATDGEPAYVVKVFLRGGLLLLVADSPQRALMCYCKHPNSFSRFPCMYCMVEQTQDNEGGDLGDQLYDIVANRRTRGLMLEGRSQLEALASNPVQQGQLSSALGVVAPQEGDVWL-LFEACDIVPSRVTPVESLHADALNAQALVQKYLIALLNTKGRELISATMRQRKGNNLYPPGAEPLKDPVADYSSLTGSDKWLLASIVLLVFRAVFH 696
            L C ++G LQ+GC          G  +   +VF+RGGLLL+  D P R+     K PN+FS+FPC YCMV    D  GGD+G+  +DI  +RRT G  ++G S+LEALA +P+QQ + S  LG+VAP    + L L+ A  IVP    PVE LH DAL    L Q + + LL+ KGR L+SA M Q K + LYPPG + LKD + DY SLTGSDKW L SI+LLVFR V  
Sbjct:  101 LQCEILGLLQQGCLGRRVLRDEQGARSEE-EVFVRGGLLLMCGDGPGRSKCLGTKAPNNFSKFPCSYCMVSHGDDETGGDVGNPQFDIDKHRRTSGRTMDGFSELEALADDPLQQEERSKELGLVAPNASGLKLPLYHAMRIVPGDHVPVERLHFDALGQCQLCQVFCLELLSKKGRRLVSAIMAQ-KSSLLYPPGTDKLKDILTDYPSLTGSDKWTLQSIMLLVFRVVLQ 329
[Close]
BLAST of Ec-00_006920.1 vs. uniprot
Match: A0A6H5K9M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9M0_9PHAE)

HSP 1 Score: 181 bits (460), Expect = 2.170e-48
Identity = 103/233 (44.21%), Postives = 139/233 (59.66%), Query Frame = 1 
Query:    1 MDLFCRLMGDLQKGCTAVVHFPATDGEPAYVVKVFLRGGLLLLVADSPQRALMCYCKHPNSFSRFPCMYCMVEQTQDNEGGDLGDQLYDIVANRRTRGLMLEGRSQLEALASNPVQQGQLSSALGVVAPQEGDVWL-LFEACDIVPSRVTPVESLHADALNAQALVQKYLIALLNTKGRELISATMRQRKGNNLYPPGAEPLKDPVADYSSLTGSDKWLLASIVLLVFRAVFH 696
            + L C ++G LQ GC         +G  A+  +VF+RGGLLL+  D   R+     K PNS+SR PC YCMV Q  D+  GDLG+  +DI  +RRT G + +G  +L  LA +P +  + S  LG+V P    + L L++A  +VP+   PVE LH DAL    L Q + + +L+T GR L+ A M Q K + LYPPG   +KD V +Y+SLTGSDKW L SI+LLVFR V  
Sbjct:  667 IGLQCEVLGLLQNGCLGRAKLTDQEGA-AFEQEVFVRGGLLLMCGDGQGRSKFLGTKAPNSWSRHPCAYCMVRQRTDDTSGDLGNPRFDIDKHRRTWGQITKGFEELHGLADDPRELERRSKELGLVEPDASGLPLPLYDAMRVVPTENVPVERLHFDALGQSQLCQIFFLEMLSTAGRRLVGAIMAQ-KPSLLYPPGTGKIKDIVTNYASLTGSDKWTLQSIMLLVFRMVLQ 897
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BLAST of Ec-00_006920.1 vs. uniprot
Match: A0A6H5JYX6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYX6_9PHAE)

HSP 1 Score: 179 bits (454), Expect = 1.320e-47
Identity = 106/241 (43.98%), Postives = 141/241 (58.51%), Query Frame = 1 
Query:    7 LFCRLMGDLQKGCTAVVHFPATDGEPAYVVKVFLRGGLLLLVADSPQRALMCYCKHPNSFSRFPCMYCMVEQTQDNEGGDLGDQLYDIVANRRTRGLMLEGRSQLEALASNPVQQGQLSSALGVVAP------QEGDVWLLFEACDIVPSRVTPVESLHADALNAQALVQKYLIALLNTKGRELISATMRQRKGNNLYPPGAEPLKDPVADYSSLTGSDKWLLASIVLLVFRAVFHTTATM 711
            L C ++G L+ GC         +G  A+  +VF+RGGLLL+  D   R+     K PN++S+ PC YCM+ Q  D+ GGDLG+  +DI  +RRT G + +G S+L+ALA  P +Q + S  LG+ +         G    LF A  IVP+   PVE LH DAL    L Q + + +L+T GR L+SA M Q K + LYPPG   LKD V +Y SL GSDKW+L SIVLLVFR V    + M
Sbjct:  242 LQCEILGLLKNGCLGRCKLTDEEGA-AFEQEVFVRGGLLLMCGDGQGRSKFLGTKAPNNWSKHPCAYCMMSQRDDDTGGDLGNPRFDIDKHRRTWGQITDGLSELDALADVPHEQDRRSRDLGMRSTIKRPGNASGLPLPLFTAMRIVPTENVPVERLHFDALGQSQLCQVFFLEMLSTAGRRLVSAIMAQ-KPSLLYPPGTRKLKDVVTNYVSLNGSDKWILQSIVLLVFRIVLQDVSAM 480
[Close]
BLAST of Ec-00_006920.1 vs. uniprot
Match: A0A6H5JYV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYV0_9PHAE)

HSP 1 Score: 174 bits (441), Expect = 8.020e-47
Identity = 105/225 (46.67%), Postives = 135/225 (60.00%), Query Frame = 1 
Query:   64 PATDGEPAYVV---KVFLRGGLLLLVADSPQRALMCYCKHPNSFSRFPCMYCMVEQTQDNEGGDLGDQLYDIVANRRTRGLMLEGRSQLEALASNPVQQGQLSSALGVVAPQEGDVWLLFEACDIVPSRVTPVESLHADALNAQALVQKYLIALLNTKGRELISATMRQRKGNNLYPPGAEPLKDPVADYSSLTGSDKWLLASIVLLVFRAVFHTTATMVSSCSL 729
            P   G   YV+   +VF R GLLL V D   RA +   +  N+FSRFPC YCMVEQ  +  GGDLGD  YDI ANRRT G +  G    ++LA N V+Q + S  LG+VA   G    ++++    P+ V PVE LH DAL +  L Q   + +L+T+GR L+SA + Q   + LYP G E LKD V++YSSLTGSDKW L SI+LLVFR +      MV   +L
Sbjct:  249 PRIPGVHTYVLPSRQVFARRGLLLWVGDGSGRAKVLGPRACNNFSRFPCPYCMVEQRDNITGGDLGDAQYDIEANRRTWGQITAGLDTPKSLADNIVEQSRQSMVLGLVADSNGPSLPMYDSMLTAPTAVVPVERLHFDALGSCQLCQVSCLEMLSTQGRRLVSAVVAQNP-SLLYPAGTERLKDIVSNYSSLTGSDKWTLQSIMLLVFRPIRANVGAMVRFSTL 472
[Close]
BLAST of Ec-00_006920.1 vs. uniprot
Match: A0A6H5KWG2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWG2_9PHAE)

HSP 1 Score: 150 bits (378), Expect = 1.350e-41
Identity = 89/185 (48.11%), Postives = 117/185 (63.24%), Query Frame = 1 
Query:   88 YVVKVFLRGGLLLLVADSPQRALMCYCKHPNSFSRFPCMYCMVEQTQDNEG-GDLGDQLYDIVANRRTRGLMLEGRSQLEALASNPVQQGQLSSALGVVAPQ--EGDVW--LLFEACDIVPSRVTPVESLHADALNAQALVQKYLIALLNTKGRELISATMRQRKGNNLYPPGAEPLKDPVADYS 627
            +V K+FLRGG L  V+DSPQRA   YCKHPN+ ++ PC YC  EQ +     GDLG+  YD+ ANRRT G   +G  +L+ L   P +Q + S+ L +VAP    G V    L++   + P+R  PVESLHA AL AQALVQ + +AL+N  GR +IS+ +RQ  G+ LYPP   PLKD   +YS
Sbjct:    3 FVEKIFLRGGPLTWVSDSPQRAKPLYCKHPNNSTKLPCPYCKAEQDERLPTCGDLGNARYDVEANRRTWGEAQDGWRELQGLDLAPNEQTKRSAELEIVAPTGVSGGVLGRPLWDKAFVNPARHVPVESLHAYALGAQALVQFFFLALMNEAGRGVISSIVRQ--GSTLYPPATAPLKDICTNYS 185
[Close]
BLAST of Ec-00_006920.1 vs. uniprot
Match: A0A6H5JWQ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWQ6_9PHAE)

HSP 1 Score: 153 bits (386), Expect = 6.570e-39
Identity = 96/208 (46.15%), Postives = 125/208 (60.10%), Query Frame = 1 
Query:   97 KVFLRGGLLLLVADSPQRALMCYCKHPNSFSRFPCMYCMVEQTQDNEG-GDLGDQLYDIVANRRTRGLMLEGRSQLEALASNPVQQGQLSSALGVVAPQ--EGDVW--LLFEACDIVPSRVTPVESLHADALNAQALVQKYLIA---LLNTKGRELISATMRQRKGNNLYPPGAEPLKDPVADYSSLTGSDKWLLASIVLLVFRAVFH 696
            ++FLRGG L  V+DSPQRA++ YCKHPN+ ++ PC YC  +Q +     GDLG+  YD+ ANRRT G   +G  +L+AL   P +Q + S+ LG++AP    G V    L++   I P+R  PVESLHADAL A A V     +     +  G E         +G+ LYPP   PLKD   +YSSL GSDKWLL SI+LLV R V H
Sbjct:  250 EIFLRGGPLTWVSDSPQRAILLYCKHPNNSTKLPCPYCKADQEERLPTCGDLGNARYDVEANRRTWGEAQDGWRELQALDLAPNEQTKRSAELGIMAPTGVSGGVLGRPLWDKVFINPARHVPVESLHADALTAGAGVGAGFFSGPPERSWPGSEFSILW----QGSTLYPPATAPLKDICTNYSSLKGSDKWLLGSILLLVSRCVLH 453
The following BLAST results are available for this feature:
BLAST of Ec-00_006920.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6M3_ECTSI1.630e-16899.58Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A6H5KSU0_9PHAE5.500e-10984.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G6T4_ECTSI4.480e-9163.01Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G2D4_ECTSI9.010e-6050.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KLQ7_9PHAE1.940e-5448.48Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K9M0_9PHAE2.170e-4844.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JYX6_9PHAE1.320e-4743.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JYV0_9PHAE8.020e-4746.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KWG2_9PHAE1.350e-4148.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JWQ6_9PHAE6.570e-3946.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:10968671..10970903 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Length783
Hectar predicted targeting categoryother localisation
Gene idEc-00_006920.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_006920Ec-00_006920Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 10968671..10970903 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_006920.1.3Ec-00_006920.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 10968671..10968976 -
Ec-00_006920.1.2Ec-00_006920.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 10970052..10970429 -
Ec-00_006920.1.1Ec-00_006920.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 10970805..10970903 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_006920.1CDS:Ec-00_006920.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 10968671..10968976 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_006920.1Ec-00_006920.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 10968671..10970903 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_006920.1 ID=Ec-00_006920.1|Name=Ec-00_006920.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=261bp
MDLFCRLMGDLQKGCTAVVHFPATDGEPAYVVKVFLRGGLLLLVADSPQR
ALMCYCKHPNSFSRFPCMYCMVEQTQDNEGGDLGDQLYDIVANRRTRGLM
LEGRSQLEALASNPVQQGQLSSALGVVAPQEGDVWLLFEACDIVPSRVTP
VESLHADALNAQALVQKYLIALLNTKGRELISATMRQRKGNNLYPPGAEP
LKDPVADYSSLTGSDKWLLASIVLLVFRAVFHTTATMVSSCSLTLNTQNM
RVPTEAMQAI*
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spliced messenger RNA

>Ec-00_006920.1 ID=Ec-00_006920.1|Name=Ec-00_006920.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=783bp|location=Sequence derived from alignment at chr_00:10968671..10970903- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGGACCTATTCTGCCGGCTCATGGGTGACCTTCAGAAGGGTTGCACTGC
CGTCGTGCACTTCCCGGCTACCGATGGCGAACCAGCTTACGTCGTCAAGG
TCTTTCTTCGAGGCGGACTTTTGCTACTGGTAGCCGACTCCCCGCAACGA
GCGTTGATGTGCTATTGCAAGCACCCCAACAGCTTCAGCAGGTTCCCGTG
CATGTACTGCATGGTAGAGCAGACGCAAGACAACGAAGGGGGGGACTTGG
GCGACCAGTTGTACGATATCGTCGCCAACCGGCGAACGAGGGGGTTAATG
CTGGAAGGAAGGAGCCAGTTGGAGGCTTTGGCGTCCAACCCTGTTCAGCA
GGGACAGCTATCATCTGCGCTCGGCGTGGTTGCCCCCCAGGAGGGTGACG
TGTGGCTCCTGTTCGAAGCGTGCGACATCGTGCCGTCCAGGGTAACGCCG
GTGGAAAGCTTGCATGCTGATGCTCTGAATGCACAGGCGTTGGTGCAGAA
GTACTTGATTGCGCTGCTGAACACCAAGGGACGGGAGCTCATATCGGCCA
CCATGAGACAGCGCAAGGGTAACAATCTGTACCCGCCCGGTGCTGAACCC
CTGAAGGACCCCGTGGCGGACTATTCGTCCCTGACTGGCAGTGACAAGTG
GCTGCTCGCCTCCATTGTGCTGCTCGTGTTTAGGGCGGTGTTCCACACCA
CGGCGACGATGGTAAGCTCGTGTTCCCTAACCCTAAATACGCAGAACATG
AGAGTACCAACAGAAGCAATGCAAGCTATATAG
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protein sequence of Ec-00_006920.1

>Ec-00_006920.1 ID=Ec-00_006920.1|Name=Ec-00_006920.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=261bp
MDLFCRLMGDLQKGCTAVVHFPATDGEPAYVVKVFLRGGLLLLVADSPQR
ALMCYCKHPNSFSRFPCMYCMVEQTQDNEGGDLGDQLYDIVANRRTRGLM
LEGRSQLEALASNPVQQGQLSSALGVVAPQEGDVWLLFEACDIVPSRVTP
VESLHADALNAQALVQKYLIALLNTKGRELISATMRQRKGNNLYPPGAEP
LKDPVADYSSLTGSDKWLLASIVLLVFRAVFHTTATMVSSCSLTLNTQNM
RVPTEAMQAI*
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mRNA from alignment at chr_00:10968671..10970903-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_006920.1 ID=Ec-00_006920.1|Name=Ec-00_006920.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=2233bp|location=Sequence derived from alignment at chr_00:10968671..10970903- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGACCTATTCTGCCGGCTCATGGGTGACCTTCAGAAGGGTTGCACTGC
CGTCGTGCACTTCCCGGCTACCGATGGCGAACCAGCTTACGTCGTCAAGG
TGCGCTTGTACGCCTTCTGCGTGTTGTGATGTCCTCGTCTATGTGCCGAC
GGTTTCCAACCACCCGTGCGTTTGTGTTGTAGAGATCTTTTCTTTCGTTT
AAAGGTGTTGCATGCATAAAGCCTTCTCTCGTGTCGAGGGATTTTACCAT
CCGCTTCGGGTTTGTGTTCACCAAGGAAGGCAACAATAAATATTTCCTAG
ATTGCCAACCTGTGATGCGCAAGACGTATGCGTTCAATAGTCAGAGGCCG
TGTTTTATGTGCAACCGGTCTCCTATAGTCCACCAGTTTAACGGCATACT
TTATCTACACGTCACGTGGATATGGCTGAACACAACGAGCGTGCACTTTC
AATCACAATTGCGCGGCGGTGCAGGTCTTTCTTCGAGGCGGACTTTTGCT
ACTGGTAGCCGACTCCCCGCAACGAGCGTTGATGTGCTATTGCAAGCACC
CCAACAGCTTCAGCAGGTTCCCGTGCATGTACTGCATGGTAGAGCAGACG
CAAGACAACGAAGGGGGGGACTTGGGCGACCAGTTGTACGATATCGTCGC
CAACCGGCGAACGAGGGGGTTAATGCTGGAAGGAAGGAGCCAGTTGGAGG
CTTTGGCGTCCAACCCTGTTCAGCAGGGACAGCTATCATCTGCGCTCGGC
GTGGTTGCCCCCCAGGAGGGTGACGTGTGGCTCCTGTTCGAAGCGTGCGA
CATCGTGCCGTCCAGGGTAACGCCGGTGGAAAGCTTGCATGCTGATGCTC
TGGTGCGTTCATACCGTATATGACACAAGATAAAACACCTCCTTGACCGA
TTTTCAAAGCTCGATTTCTCAACAGCAGGAAGACTCACAGCGCCGAAAAC
GGTGGCGTTGGAACCGTCTCGTTGAGAGCTTTTCGAAAATGAATCATTTC
GTTTATGTATCCTCTTCGTCATCGAGTAATCGAGCTTTGAAAATCGGGCC
AGGGGGTGTGTTATCTTGTGTCATATACGATAGTTTTGATCCACATGTAC
TCTTCACACAGTAGTTCTACAGTGTTAGTGAGTCTTGACCTCCGCCGCGG
TGCTACTTTTACGCCGTGTGCATCAAGTCATACAACAAAGTTGGATACAT
AAAGTGCGCCTACTTTCTCAACGCAAGTATCCACACGGGTGTGTCGTCGA
ACGGCACACACGTCAAACAGGATTGTATAGACACCATCGCAAGGCGTGTT
CCGCGCTTGTAACTCCCCCCCGGAGTCCATTAATTAATTAACGAACGCAA
AAAATATCGTCTATTGACACAAGCATTTTTCATCACCGACGGCTAAAAGT
TACACACCATACCACATCCATCGCACAAAAGCTAGCTCAGGCCGCGGGGG
TATACGCTAGGCACACTTTTCGTGGCATGTCGTTTCTAATCAAGGATCTA
CACACGACAATGCTCGTGACGTTCACGGAAAATTGATCACGGAGGTCAGT
CTCTCGCGCAGTGTTTGGGAAACACACAGTACAAAAAATGGGTGGATAGC
ACGGGCGAAGGGTCCGGGTCCCGGGACGAATTATTACAAGCGTGTCCCTT
CGTTTAAACACAGGAACGTACGGGGGGGAGGGGCGCTTCGCGAAGGGTGT
GATGGCGATGTTTTTACCTTCGTATAGTACCTCTCGGATGCGCGGCGTCC
TCCGGACGTGGTGTTTGAAGTATGCAACGCACACGACCATCAGCGCGAAA
CTACTGCTTTAGAATGAACCAATAGAATGAACCAATCGGTTCATTGAATC
TGTCGAAGCAGCCGACTGCTTTGACAATTTCTCCTTTTTTTGCCGCGACC
GCTTAATCTTCACTCTTTTTGTTGCAGAATGCACAGGCGTTGGTGCAGAA
GTACTTGATTGCGCTGCTGAACACCAAGGGACGGGAGCTCATATCGGCCA
CCATGAGACAGCGCAAGGGTAACAATCTGTACCCGCCCGGTGCTGAACCC
CTGAAGGACCCCGTGGCGGACTATTCGTCCCTGACTGGCAGTGACAAGTG
GCTGCTCGCCTCCATTGTGCTGCTCGTGTTTAGGGCGGTGTTCCACACCA
CGGCGACGATGGTAAGCTCGTGTTCCCTAACCCTAAATACGCAGAACATG
AGAGTACCAACAGAAGCAATGCAAGCTATATAG
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Coding sequence (CDS) from alignment at chr_00:10968671..10970903-

>Ec-00_006920.1 ID=Ec-00_006920.1|Name=Ec-00_006920.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=783bp|location=Sequence derived from alignment at chr_00:10968671..10970903- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGACCTATTCTGCCGGCTCATGGGTGACCTTCAGAAGGGTTGCACTGC
CGTCGTGCACTTCCCGGCTACCGATGGCGAACCAGCTTACGTCGTCAAGG
TCTTTCTTCGAGGCGGACTTTTGCTACTGGTAGCCGACTCCCCGCAACGA
GCGTTGATGTGCTATTGCAAGCACCCCAACAGCTTCAGCAGGTTCCCGTG
CATGTACTGCATGGTAGAGCAGACGCAAGACAACGAAGGGGGGGACTTGG
GCGACCAGTTGTACGATATCGTCGCCAACCGGCGAACGAGGGGGTTAATG
CTGGAAGGAAGGAGCCAGTTGGAGGCTTTGGCGTCCAACCCTGTTCAGCA
GGGACAGCTATCATCTGCGCTCGGCGTGGTTGCCCCCCAGGAGGGTGACG
TGTGGCTCCTGTTCGAAGCGTGCGACATCGTGCCGTCCAGGGTAACGCCG
GTGGAAAGCTTGCATGCTGATGCTCTGAATGCACAGGCGTTGGTGCAGAA
GTACTTGATTGCGCTGCTGAACACCAAGGGACGGGAGCTCATATCGGCCA
CCATGAGACAGCGCAAGGGTAACAATCTGTACCCGCCCGGTGCTGAACCC
CTGAAGGACCCCGTGGCGGACTATTCGTCCCTGACTGGCAGTGACAAGTG
GCTGCTCGCCTCCATTGTGCTGCTCGTGTTTAGGGCGGTGTTCCACACCA
CGGCGACGATGGTAAGCTCGTGTTCCCTAACCCTAAATACGCAGAACATG
AGAGTACCAACAGAAGCAATGCAAGCTATATAG
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Synonyms
The feature 'Ec-00_006920.1' has the following synonyms
Synonym
Esi0524_0007
Esi_0524_0007