Ec-00_006890.2 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Ec-00_006890.2
Unique Name	Ec-00_006890.2
Type	mRNA
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	183

Homology

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BLAST of Ec-00_006890.2 vs. uniprot
Match: D7G3R9_ECTSI (Helicase_C_4 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3R9_ECTSI)

HSP 1 Score: 354 bits (909), Expect = 1.470e-108
Identity = 233/404 (57.67%), Postives = 253/404 (62.62%), Query Frame = 3

Query:   72 MRRKRLQKMRQLEDGDVTFFEAVLVWLGKVGIVWRTMRSTAASTRTSKATLSFPESNPGAPYRAAARALRLLPQRA---------RDHVKEAKRDGTYEDGIRSLTGASCSVSVMRALDLPEERVLRRERWRRLR*RSTSP*PSRN--PAQVPLREGGDGPADRTCQEDASRESSGGKQGQSKTDLQQDSFWTKRSGTEVYLVVDYPGE*PQGTRRTG*KGR*RCGLPAEGGSRSRTRRS*TTIF-----------------VSSTEAEASHLWDVEMIRDKQDTDVFVLRGSRLLMAWPHLDKAFSFLYGGPSAETKKKDKTVRSPVVHVKAAAPSDPLEEAFAAAAAETLKEFNASCSEEDCGTALVSQEDAGKSFIALQLPTTRSINEHMANQIFDVLERG 1199
            MRRKRLQKMRQLEDGDVTFFEAVLVWLGKVGIV           +  +  +S         +      LR++ Q             HVKEAKRDGTYEDGIRSLTGASCSVSVMRALDLPEE  L +     ++         +   P     +E  D   +   +  A R ++G K  Q +    +  FWTKRSGTEVYLVVDYPG    G    G K       P  G      +      F                      A       V +I+DKQDTDVFVLRGSRLLMAWPHLDKAFSFLYGGPSAETKKKDKTVRSPVVHVKAAAPSDPLEEAFAAAAAETLKEFNASCSEEDCGTALVSQEDAGKSFIALQLPTTRSINEHMANQIFDVLERG
Sbjct:    1 MRRKRLQKMRQLEDGDVTFFEAVLVWLGKVGIVVEDDEVNGRIHQNVQGNVSR--------FLNRILGLRIVRQHVLFDYFHSVLEYHVKEAKRDGTYEDGIRSLTGASCSVSVMRALDLPEETGLAKGEVEAVKVTIDKSMTFQQILPKYHFAKEETDRRIELAKKMQAERVAAGNKVNQRQI-FSKTGFWTKRSGTEVYLVVDYPGRVTSGYSTYGVKRPVTVWSPCRGRVEISYKAFLNHHFRFQHRGRGLPPVGRGDDPGCLPATGITKPVVGIIKDKQDTDVFVLRGSRLLMAWPHLDKAFSFLYGGPSAETKKKDKTVRSPVVHVKAAAPSDPLEEAFAAAAAETLKEFNASCSEEDCGTALVSQEDAGKSFIALQLPTTRSINEHMANQIFDVLERG 395

The following BLAST results are available for this feature:

BLAST of Ec-00_006890.2 vs. uniprot

BLAST of Ec-00_006890.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7G3R9_ECTSI	1.470e-108	57.67	Helicase_C_4 domain-containing protein n=1 Tax=Ect...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_00	contig	chr_00:10921670..10932550 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	247.3
Seed ortholog evalue	5.6e-63
Seed eggNOG ortholog	2880.D7G3R9
Length	1703
Hectar predicted targeting category	other localisation
Gene id	Ec-00_006890.2
EggNOG free text desc.	cellular response to interleukin-11
EggNOG OGs	KOG1513@1,KOG1513@2759
COG Functional cat.	S
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-00_006890	Ec-00_006890	Ectocarpus species7 Ec32 male_plus_femaleSDR	gene	chr_00 10921670..10938747 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_006890.2.1	Ec-00_006890.2.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 10921670..10921840 +
Ec-00_006890.2.2	Ec-00_006890.2.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 10922897..10922947 +
Ec-00_006890.2.3	Ec-00_006890.2.3	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 10923371..10923454 +
Ec-00_006890.2.4	Ec-00_006890.2.4	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 10925030..10925140 +
Ec-00_006890.2.5	Ec-00_006890.2.5	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 10926226..10926291 +
Ec-00_006890.2.6	Ec-00_006890.2.6	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 10926619..10926748 +
Ec-00_006890.2.7	Ec-00_006890.2.7	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 10927422..10927474 +
Ec-00_006890.2.8	Ec-00_006890.2.8	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 10927890..10928058 +
Ec-00_006890.2.9	Ec-00_006890.2.9	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 10929237..10929337 +
Ec-00_006890.2.10	Ec-00_006890.2.10	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 10930939..10931080 +
Ec-00_006890.2.11	Ec-00_006890.2.11	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 10931926..10932550 +

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_006890	5UTR:Ec-00_006890.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	five_prime_UTR	chr_00 10921670..10921840 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_006890.2	CDS:Ec-00_006890.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	CDS	chr_00 10928050..10928058 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_006890	3UTR:Ec-00_006890.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	three_prime_UTR	chr_00 10932223..10932550 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_006890.2	Ec-00_006890.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	polypeptide	chr_00 10928050..10932222 +

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at chr_00:10921670..10932550+
coding sequence from alignment at chr_00:10921670..10932550+

mRNA sequence

>Ec-00_006890.2 ID=Ec-00_006890.2|Name=Ec-00_006890.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=183bp
MIRDKQDTDVFVLRGSRLLMAWPHLDKAFSFLYGGPSAETKKKDKTVRSP
VVHVKAAAPSDPLEEAFAAAAAETLKEFNASCSEEDCGTALVSQEDAGKS
FIALQLPTTRSINEHMANQIFDVLERGSELLEGSSLLGVGLVATTVGHAG
VSFGLVRGICVAHPVTPLDGNLLPCHDEGFRN*

spliced messenger RNA

>Ec-00_006890.2 ID=Ec-00_006890.2|Name=Ec-00_006890.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1703bp|location=Sequence derived from alignment at chr_00:10921670..10932550+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
CAGGTGATCGAGAGTCGTAAGGACAATGAGAGGAACAACAACTACACCAG
CCTCTCGGAGACCAGCGGAAAGATGAGGAGGAAGAGGCTCCAAAAGATGC
GGCAGCTGGAGGACGGAGACGTGACCTTCTTCGAGGCGGTGCTGGTCTGG
CTGGGCAAGGTCGGCATAGTGGTGGAGGACGATGAGGTCAACGGCCGCAT
CCACCAGAACGTCCAAGGCAACGTCTCTCGTTTCCTGAATCGAATCCTGG
GGCTCCGTATCGTGCGGCAGCACGTGCTCTTCGACTACTTCCACAGCGTG
CTCGAGTACCACGTGAAGGAGGCCAAGCGGGACGGGACTTACGAGGACGG
CATCCGGTCCCTCACGGGGGCAAGCTGCAGCGTCTCCGTCATGCGCGCTC
TCGACCTACCGGAGGAGACGGGTCTTGCGAAGGGAGAGGTGGAGGCGGTT
AAGGTGACGATCGACAAGTCCATGACCTTCCAGCAAATCCTGCCCAAGTA
CCACTTCGCGAAGGAGGAGACGGACCGGCGGATCGAACTTGCCAAGAAGA
TGCAAGCAGAGAGAGTAGCGGCGGGAAACAAGGTCAATCAAAGACAGATC
TTCAGCAAGACAGGCTTCTGGACGAAGCGTTCCGGCACGGAGGTCTACTT
GGTGGTAGACTACCCGGGGCGAGTAACCTCAGGGTACTCGACGTACGGGG
TAAAAAGGCCGGTGACGGTGTGGTCTCCCTGCCGAGGGAGGGTCGAGATC
TCGTACAAGGCGTTCTTGAACCACCATTTTCGTTTCCAGCACCGAGGCAG
AGGCCTCCCACCTGTGGGACGTGGAGATGATCCGGGACAAGCAGGACACG
GACGTTTTCGTGCTCCGCGGGTCTAGGCTGCTAATGGCCTGGCCCCACCT
CGACAAGGCCTTCAGCTTCCTCTACGGCGGGCCGTCGGCCGAGACAAAGA
AGAAAGACAAGACGGTCAGGAGCCCTGTGGTTCACGTCAAGGCCGCAGCA
CCCTCGGACCCGCTGGAGGAGGCGTTTGCTGCCGCTGCTGCGGAGACCCT
GAAGGAGTTCAACGCGTCCTGCTCGGAGGAGGACTGCGGGACGGCGTTGG
TGTCCCAGGAAGACGCCGGAAAGTCGTTCATCGCCCTCCAGCTGCCAACC
ACCCGCTCGATCAACGAACACATGGCCAACCAGATCTTCGACGTCTTGGA
GAGAGGGAGTGAGTTGCTCGAGGGATCGAGCCTCTTGGGTGTCGGGTTGG
TTGCGACTACTGTTGGGCACGCGGGCGTTTCGTTCGGGTTGGTTCGGGGT
ATATGCGTAGCGCACCCCGTGACTCCATTGGACGGTAATCTTCTTCCGTG
TCATGACGAGGGATTCCGTAACTGATGTGGCCTCTTCTTCGGCGCCGCTG
CAACGGGAATGAGCCCCAATCACCAGAACAGCAATGCCCCGAGAAGATGC
CTAGCAATGTCGGGGGTCGAAATTCCCCGGAGTCTCTGTACTTGTACAGA
GGGATTTAGTTCCAAGCGCGTGGTAGATATGCTGGTGTTTTTGTGCCTAT
TGAGAACGAAAATGGGGGGGGGGGGGGTATTTGTCGAATGCCACGGGGAA
CACGCTTTTCTTGCAAGTGTCGAAGGCATGTGCGCGTACCTGTCGTCCAG
GCAGTGGTATACTCAGCAAAAAAAACCCGTCTGCGTGCCCCCTCTTCCAT
CCC

protein sequence of Ec-00_006890.2

>Ec-00_006890.2 ID=Ec-00_006890.2|Name=Ec-00_006890.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=183bp
MIRDKQDTDVFVLRGSRLLMAWPHLDKAFSFLYGGPSAETKKKDKTVRSP
VVHVKAAAPSDPLEEAFAAAAAETLKEFNASCSEEDCGTALVSQEDAGKS
FIALQLPTTRSINEHMANQIFDVLERGSELLEGSSLLGVGLVATTVGHAG
VSFGLVRGICVAHPVTPLDGNLLPCHDEGFRN*

mRNA from alignment at chr_00:10921670..10932550+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>Ec-00_006890.2 ID=Ec-00_006890.2|Name=Ec-00_006890.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=10881bp|location=Sequence derived from alignment at chr_00:10921670..10932550+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
CAGGTGATCGAGAGTCGTAAGGACAATGAGAGGAACAACAACTACACCAG
CCTCTCGGAGACCAGCGGAAAGATGAGGAGGAAGAGGCTCCAAAAGATGC
GGCAGCTGGAGGACGGAGACGTGACCTTCTTCGAGGCGGTGCTGGTCTGG
CTGGGCAAGGTCGGCATAGTGGTGAGTGGGTTTATGTTTATATGAGTGTC
TGCAGTGGCGCCGGGTGATTCGGGCACACGGCAGTAGCGGCTATGTTGAT
GTGGCTGGGCTAGGTCGGCGTAGTGGCGAGGAGTAAAGTAGGTTTACAAG
GAAGCGAGCGTGTCGTAGGCGGGAGTGATTCTGGCACAGCAGTGTAGCGG
CCACGTATGCGGCTTGGGGCTGGGCATGTTCGGCAGGCAGTTTACAAGGT
CTACTTTTTAGTGGTGAGTCTCAAGCTGGCTCGGGTGACTCGCGCACGGC
AGTAGCGGCTGCGGTTTGAGAGAGGGTCGGGACATCGCCAGCAGCACTCT
CTGGAGTCCGGTCTTCTCTTATCTATGTCCCATCGCGGGGACAGGCCACC
TTGTTGTATGAGCGACCTTGATCGATCTCAGGTGCCTGTGCCAATAATGA
AAGAAGGTTCTCAATCAACAGCACAGCACGGCACAGCCAAATGTATAGGT
CGACTTTCCTTTCCCGCCTGAGCCTGTCTCAATTAGTCCCCCTGTGTCGT
GTGCACTGCTGCATGACATTGAAGCTTGTCGGTTGCGCTTTGCAGCGCTC
TTTTTTTGTCGGAAAAACACAAAGGACACACAACACATAAAAAGCCAGGA
ACCCCAACGCTAGTTACCAGTCGTCCTTGTGACTCACTTCACTCAGCGTG
GCGGCGTACGCCGCAGCACCCTTGCAGGATGGTAGTGAGACATGATCTCT
TGGTTTTTGTTTTGTTTTTACTCCGTGTGCCTCTACTCGGCAAGGCTTGC
AGGATGGTATTGAAAATATGCAAGATGGCACTGAATTATGACTTTATTTT
GGTATTGAAGTACTGTATGCAGGATGGCACTGAATTGTGACTTTATTATG
GTATTGAAGTATGCACGATGGTACTGAATTATGTTGTCTTGGTTTTTGTT
TTGTTTTTACTCCGTGTGCCTCTACTCGGCAAGGCTTGCAGGATGGTACT
GAAAATATCCACGATGGTACTGAACTATTTACCTCTTGGTTTTTGTTTTG
ACTTGCGTGTGCGTCTTTTGGGCAAAGGTGGAGGACGATGAGGTCAACGG
CCGCATCCACCAGAACGTCCAAGGCAACGTGAGTGGCGATACGAAACAAT
CAGTCCCCTTATTGTTGGTGTTGTTGTTGTCGTTTTTGCTCTATGTGTTG
CTGCTGCTTGTATCTTCCCGTTCGATGAACTATTCCACGGGGGAAATCGT
ATCGCCAATAGTTTAACAACGTCAAGAGGATATACGACAACGCCGTATCG
TCTCTTCCGCTTGCGTGTTGCAACGAACACATTCTTCGGTTCTTAACTTA
TAAATGGTAGAGCCGCTGCACCTCACTCGGCGAGGTGTTGCGGGGGCCCG
TGTTATGCTTCGGCCATCGAAACGACCCCCTCCCCCCCCCCCCGGCAGTG
TAGGGATGCGAGGTCAGTGGTGTACCGACGACGGCATGCGTTTACATGGG
TACCCATCCCCCCTGTTTCAACAGACCAACGATTTCAATCTCTTGTTGCA
GGTCTCTCGTTTCCTGAATCGAATCCTGGGGCTCCGTATCGTGCGGCAGC
ACGTGCTCTTCGACTACTTCCACAGCGTGCTCGAGGTGATTCGCGGTTCG
TTCAGCGTAGGCTTGCGGAGGCTTTCCTTGGTTGTGCTGGTGGCGTTTTT
CCTGTTACAGAGGGGTTCCCAGAAAATCCACCTGCACTATTCAAAGTACA
GTACTCACAATGACTTGGAAATTCGGTATGTGCCCGCCGAAAACACAGGC
ACTATACCAAGCATTGGCACTATTCAGCCGCCACCAAACAGGGACCCCCT
CCGTACCCCTTTCTACATTGTTGTGGGATGAACACGGCCACCAAGGCCGG
GTGCCGCGTCGCATGGTGGTAGATGCGTCAAGACGAAGACGACCCTACCG
ATAGTATTGTCGGGGACTCCTAGAAATGTCTCGTGGTTTGCTTGCGTGAT
TGATTGAGGAGCGCCGGGATGTCGCATCGGCTTTGTAGAAGATAAAGGTG
CAGGGCGAGCGTGAAACTGGTCATGACCCCTCGTCCCCCACCCGCCTGCC
GACACCTTCCCTAATGCATCGGATGTAAGACTGCCGTCATGCGTGGTTCT
GTGTGAACCCCGCTCGCTTGCGCTCTGCTTTCGTAACGCCTGTTTTGTTT
CATTCGAAGCACCCGTGTCCGCCCGACAAATTTCCAACAAGTAGTGTAAT
CAACCTGAAAGACTTCAATGACTGCGATCTCGCCCCCCTCCCCCGCTCGT
TCGGAACGAACTGCTCTCTGGTACTTTGAGATATTATATACGTAAATATA
ATAAATGTACCACCTACATATTATGAATGCACCACGTTGTGACGGAGGTT
CAACCACCCCCCGCTCCCGAACCCGAATGCGAAGACCGTGTTCATGTAGT
CGCGGAATGTCCGTGGTACGAAGAGGAGAGGGAAGTGTACATGACTGAGC
TGGGAAAAATACAAGGGACGTACAGGGAGATGTTTGAGGCATGGAATAGA
GAGGAGAGGACGGTAGCTGTGCTGGGGAGTAGGAAGTGGTTTGAAAAGGC
GGGAAGGGATATCGTTAGGATAGACAGACTCGGGAAGACATTTTTGAGTC
ACCTTTGGCAAAGTAGGAAGGAACGATTGGCCATCGGTGATCGGTCCTGT
GGGAACAATGCTCCGTCCTCTCGAGGACGCGTGGTCAATGGTCTAACCGC
TAAGGCATGCAAAACATAAGAGTATGCCCCCGCTCCCGAACCTAGTGCTC
CGTCCTCTCGACGAAGTGTGGTCAATGGTCTACTGTAACCGCTAAGGCAT
GCAATACATGAGTATACGCCCCCCCCCCCCCCCCCCCCCCCCCCNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCT
TCTTGGGACTCGCAAAATACCCCAGGGGGTTTCGGGTTTGGGGATGTGAG
ACCCTGTTCCGGGGAAAACCCGGGGTGTTCCTTCCCGGTTTTGTGGGGAT
GGGGGGTCAAGGGTAAAATGATTAGGGCATGCAGGATTAGGGGTCCCCCC
CCCCCCCCCCCCGACCGTGTTTGTCGCGAACGCCTCTTGGAATATAAAAT
GGAACCCCAGTACCACGTGAAGGAGGCCAAGCGGGACGGGACTTACGAGG
ACGGCATCCGGTCCCTCACGGGGGCAAGCTGCAGCGTCTCCGTCATGCGC
GCTCTCGACCTACCGGAGGAGGTAGGTGGTGACGGAAGATAACCCCCCCA
CCCCCAGACCGGATTTTCAATGCCCTCTTAAAAGAGTGGCGGGAGGCGGT
GGAGCCGTCTCGTCTTGAGCTTTCCGAAAACGTATACAGTATGTCGTTTT
CATTTGTGCGTCGTGGAGCTTCGAAAATCGGTCGAGGGTGTGTGTGTGTA
TGATCACCTGTTGTATCTTCCGTCACCAATGGTGACCTAACCCTACGCCT
AAGCCTCTGTGTAACCCCTTGCCGAGGGTGCCCATGCCCCCCCCCAACCG
TAACTGTGTCCGTGTTCATCCCTAGCCCCTCGAGCCACATGGCTCCCTGA
GACGACGGTGGTGCCAGAAATGCACAGAATTTTTGTGGCAGATCACGCGT
GGTGTGCAGCGAGCAGCAATAAGTTTGCCCCGCAAGGGGGTGTCGCATCG
ATGCTTGTGTCCCGTCGTCGTGTCTATTTTTCTAAATATAGTGAATCACC
GTGTGCGGCCCATGTACATACATACGGAGATTCCAGGTAGCTGTGTTTTC
GTAGGTGCGGGCTTTGTCTGAAATATCTCCCACGGATTTCGAATGAGCGG
CAGAGTTGCCGGGAGGCGGCAGTGGTGGCCCCGTAGCTGAGCCCGGTAGC
GACTATGGGGGGGGGGGGGCGCCGTGAATATATCATCTTGAGGGAGGCGG
TGCGTAGCTGGGTTGGTTCTTGTCGCTCACAAGGCGCCTATTGTACACCA
GAGGCCGTCTCCCATCTCGTAACCCGAGATGCTCCCACGGTGTTTTGCTC
CTTTCTTTCGGGCTTTTTGGCGATGCTGGTTTACCTCGACAACATGTTGA
CAGAAACGGTTTCAAAATGTCTCATGGTACAGCCTGGGTAGAGTAGTAGC
TTAGCAGAGAGCGGTGTGTGGGGTCCAAAAACGCGTTTTTGTATTGCTCA
GCTTTACTGCCCTTATTTATTTTTCTCTCCCTGCCGATGGGTTGTGCCTG
CCCGTCTCTCTTGGCGCGTCTGTCTTATGTACGGCCTTGCCCCCCTGTTC
CTGGCCTTTCTCCGTGCTGTTTTGTTTCCCGCGCGTGCTGTGCGTGTTCC
ATCAAGACGGGTCTTGCGAAGGGAGAGGTGGAGGCGGTTAAGGTGACGAT
CGACAAGTCCATGACCTTCCAGGTGAGCGCAGAGAAAGAGGACACACACA
TGTCGGATAATCCCATCCGCACGTCAGGGGTGCTGCTTTTACGTGGTCCT
TGCTAACATCTTTGTCGTATCACGAGGCACAGGCAGTATTTGGCTGGGGT
GAGGGACAGGCTACTTCTGTTTGGGAGGTTGCCATCACCTCAAGAACCAG
ACGCAACAATAGACGTTTTCTTCTTCTTCGTATTCCACTCTTTGTGTGAT
GGCGAACGTTGGTGGCCTGGCGGGACCCCGCAGGGTGTACCAAATCCTCA
CCCCCCCCCCCCCCCTGCTCTGCTCCACCTCCACACCGACGACTCCCAGC
AAATCCTGCCCAAGTACCACTTCGCGAAGGAGGAGACGGACCGGCGGATC
GAACTTGCCAAGAAGATGCAAGCAGAGAGAGTAGCGGCGGGAAACAAGGT
CAATCAAAGACAGATCTTCAGCAAGACAGGTGTGGGGTATGCTGCTGCTG
CTTCTGCTTTTTGCGGGCCGGTGTTTTTTTCTGGACCGCTTTCGCGAGGG
TACTATTGCTTGTCTATGAAATAGAGAGGGGGGGTTCCTATCCCTAACCC
CAACTAAAACCAAGCTTCATAATATCAGCGCGAAGGTTTGTGTTTTTTGT
TCAGGAGACAAGGGTGTCTGCATACACATTCTTTCTCGAGAGCATGCAAT
ACTACAGCGGTTGCAATCGTGGATCGATCGACCTCCAACGAACGTCGCCC
GATCCTAGTGTTTTATTTGTCGAATTTTCGTGCTTTTGTGAACGTGTTTT
CGTAATCCCATCGTTGTCTGTGTTCTGCGCGCCTCTTTGCTTTCCTTCGT
GGTATTTTGATCTGACTTCACCCAGGGGGCTCCCTCTCCAACCCTCCCCC
TTCCCCCCGCTTCTTCTCCCTTGCCACACCATACGTCGTTTTATCCGGCA
ATACGGTACCAGTATGCGGTAGTCATACAGTTCCGCGTGCACTTTCGAGA
GTTTTCGTTCGGCGCTTGGGGAATGTTTCCATGAACGACGACGCTTCATG
CTTTATGAGGTTCATGGTACGGTATGACAGACGAAACTGCTGCCCCCCTC
TCCCAACACCTTTTTTTGTCATTTGGTCCTTCTCTTGGCTTGTCTACTTC
AGGCTTCTGGACGAAGCGTTCCGGCACGGAGGTCTACTTGGTGGTAGACT
ACCCGGTACGGTATGGTACGGTACGGTACGGTATGATATAGCACGGTACG
TTGCGGTAAGAATTCGTAATATGGCGCGCTGTCGGCTCCTTGTTGTTGTT
GGTACTGGTGCCGGTGCTATTGTTCTTGTACTTGTTCTTGTTCTTGTTCA
TGCTGGTGGACTACTCCGTACGGTACGGTAAAAACTTCGTTATATGGTGC
CCTGTCATCGGCCCCTTCGCGCGTTGTTGGTTCTGGTGCTGGTGTTGCTG
TTGTTGTTGTTTTTGCTGCTGCTGCTGCTGCTGTTGTTGTTGTTGTTGTT
GTTGTTTTTGATGATGTCCTTGTTCTTGCTGCTACGGTTTTTGCCGATTC
GCTGCCGTACTGTTATCTTCTCATGATCCCCCCCCCCCCCCCCCTGCTCA
CTCGCCTTCTTTGCGTACAGGGGCGAGTAACCTCAGGGTACTCGACGTAC
GGGGTAAAAAGGCCGGTGACGGTGTGGTCTCCCTGCCGAGGGAGGGTCGA
GATCTCGTACAAGGCGTTCTTGAACCACCATTTTCGTTTCCAGCACCGAG
GCAGAGGCCTCCCACCTGTGGGACGTGGAGATGATCCGGGTGAGGCTGAG
ACCTAAACTCCACACCGAAAAGGGTTGCGGAATATACCGTAGGTTGCATT
GTAAGATGGTAAAATGGTTTGGGTATGTTTTTTTTTTTTTTGTGTTTGTG
GGCATTTTTGTTGTTTAAACTTTGGGGACGCCGGTATCGCTCACCTCGAT
TCTCAAGAGCTCGGCAGAAAAGGCGGTGACGATGCCGGCGTTCGAACCGC
CTCGTCGAGAGAGATTTCACAAAACGTGTCGTTTCATTTTGGCATCCTCT
TCCTCGTGGAGTTGTCGAGGTTCGGAAATCGGTCCAGGGTGTGTGTTGTC
TTGCGTCATGCCACCTACGGTACCGCCATGGTGGTAATTTACCGCCCAAA
AAGATAATCATTAGAATAATGTGTCTTGCCTTTGCCGTGGAGGCTGGTTG
GCCATGGTAAGCGATTGCCAGCACGGAAAAATTGTGGGGTGACGGGAGCC
CCGGCAAGGCACGGAGCCCCCCCCCCCCCTCCCTCCTCGCTCTCGCAGTT
ATTTTCCTGTTGGGTCCTAGTATCACCATTTTTCTCCGCACTTCGCTGCT
GACAACAGGCTGTCTGCCTGCGACTGGCATCACAAAGCCTGTTGTTGGCA
TCATTAAGGCTGTCGATAGATACATTTGGTTTCCATCGAGACCTGAACAG
CCAACAGCTCAACACCTGACTTGTGCTGGATGCACGCGGGGGGCTCTTTG
TCTCGTGGTTCAGTATTTTCTGTTGGGTTCCTTTTTTTCTCCCCAACCAC
GTGCTGCGAAGTACTACCCAACTGCCGTCGATTGGTCAAAACGAAACAAA
AAATGTCGCGCGGTCTGCGGCGTACCATCTTCTTCTTCTCAGGCAGTACA
TGAGCGTGATTTTTTCTTCAGTTTCTTCTTGCTGTAAACCTCTTTCGGTT
TCCTCCTTACGCTCTCTTCTCTCATCTCTCTTGTTTCTTTTCTCCGTCCA
GTGCTGTTGATGTTGTTGATGTTGTTGTTGTTGTTGTTGTTGTTGTTGTT
GTTGTTGTGGTTGCAGGCTCAAAAGACACGGACGTTTCCTTTCCTTTGCT
TTCCTCCTTACGCTATCTTCTCTCGCCTGTCTTATTTCTTTTCTCCGTCC
GGTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTCGTCGTTGT
TGCCGGTATTGTTACAGGACAAGCAGGACACGGACGTTTTCGTGCTCCGC
GGGTCTAGGCTGCTAATGGCCTGGCCCCACCTCGACAAGGCCTTCAGCTT
CCTCTACGGCGGGCCGTCGTGAGTCTCTCGACAAGCCAACCACACGGCAC
TCTTATCCCCCCCCCCTCGGTGTTTGCCATCGGGGTTGGGTTTTCGTCGC
TTGGCAACGACGTTGTAAAACAAGCCGCCCCCCCCGGTGTTTGCCATCGG
GGTTTGGGTTTTCGTCGCTTGGCAACGACGTTGTAAAACAAGCCCCCCAC
TCGGTGTTTGCCATCGGGATTGGGTTTTCGTCGATTGGCAANNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNCAGTACCCTCTTCTGTCCGTACTGAAAACAAAAAAA
AATCAAATCGCTGGCACAGGGCCGAGACAAAGAAGAAAGACAAGACGGTC
AGGAGCCCTGTGGTTCACGTCAAGGCCGCAGCACCCTCGGACCCGCTGGA
GGAGGCGTTTGCTGCCGCTGCTGCGGAGACCCTGAAGGAGTTCAACGCGT
CCTGCTCGGAGGTATACATCTAGGTGTTGCAGGGCAGAGGCGGCTTAGAG
GATCTCGCTAGAACTGATTGTTGCTTCATCGTCCGATTCCTGCGTCGGGT
GGGAATACGTATTGTCAGACATCGGTGGGCAGTATATTGGGCAGACATCG
AGTGGACAAGGTACGCGTGTCAGAATTTAGATGCAGGTTGTGCAGGGCAG
CTTCGAGCACTTCTGGACCTGATTTACTCCATCCTCCGATTCGTGCTTCA
TCGTGGGGACAAATGATGTATCAGACTTAGAGGTAGGTAAGTGTGCAGGG
CAGCTTCGAGCACTTCTGGAACTGACTTTGCTTCATCGTACGATTGTTGC
ATCGATGGACACTGTGGTTGTCATCGTTCCTCGCGATGTTGCCGAGACTA
CTATAGTGGTTTTGCCCTCGTAGCTTTTCTTTTGCTGTCGCTGTTTTGAA
TTGCTCTTTCCCGCCCCCCCCGCCCCCCTTTTTCGTGGCTTTCGCGAAGA
GCATTCAACCCTCCCGGTTTGCGCTGGCTGTTTCCTCGAGGTCTAATCGC
CCACACCACAGCAGTACACGGACAGTTGTTCAAGACGGAACAGTTTGTGC
GAGAAAAATCTAGCGCTATTAGTCGATACCGATGTTACGGTTTAGCATGA
AGTACGTATTACAGTGGTTGTTGAGTGATCGAGAGGGGTGCTGCGTTTGG
CGAAAATACGGACTGCTCGACTTGACGTCATCGTCACACACGCAATACAT
CGAGAGGTAGCACCGTTCGCTCTACCGTCCACACTCGTCGTGCTTTTAAT
TTTGTCGAATTCCGCTCGTCCTTCGTCCCGCCTTTTCATCCCTCCCGCGT
TCCCAGGAGGACTGCGGGACGGCGTTGGTGTCCCAGGAAGACGCCGGAAA
GTCGTTCATCGCCCTCCAGCTGCCAACCACCCGCTCGATCAACGAACACA
TGGCCAACCAGATCTTCGACGTCTTGGAGAGAGGGAGTGAGTTGCTCGAG
GGATCGAGCCTCTTGGGTGTCGGGTTGGTTGCGACTACTGTTGGGCACGC
GGGCGTTTCGTTCGGGTTGGTTCGGGGTATATGCGTAGCGCACCCCGTGA
CTCCATTGGACGGTAATCTTCTTCCGTGTCATGACGAGGGATTCCGTAAC
TGATGTGGCCTCTTCTTCGGCGCCGCTGCAACGGGAATGAGCCCCAATCA
CCAGAACAGCAATGCCCCGAGAAGATGCCTAGCAATGTCGGGGGTCGAAA
TTCCCCGGAGTCTCTGTACTTGTACAGAGGGATTTAGTTCCAAGCGCGTG
GTAGATATGCTGGTGTTTTTGTGCCTATTGAGAACGAAAATGGGGGGGGG
GGGGGTATTTGTCGAATGCCACGGGGAACACGCTTTTCTTGCAAGTGTCG
AAGGCATGTGCGCGTACCTGTCGTCCAGGCAGTGGTATACTCAGCAAAAA
AAACCCGTCTGCGTGCCCCCTCTTCCATCCC

Coding sequence (CDS) from alignment at chr_00:10921670..10932550+

>Ec-00_006890.2 ID=Ec-00_006890.2|Name=Ec-00_006890.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=549bp|location=Sequence derived from alignment at chr_00:10921670..10932550+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGATCCGGGACAAGCAGGACACGGACGTTTTCGTGCTCCGCGGGTCTAG
GCTGCTAATGGCCTGGCCCCACCTCGACAAGGCCTTCAGCTTCCTCTACG
GCGGGCCGTCGGCCGAGACAAAGAAGAAAGACAAGACGGTCAGGAGCCCT
GTGGTTCACGTCAAGGCCGCAGCACCCTCGGACCCGCTGGAGGAGGCGTT
TGCTGCCGCTGCTGCGGAGACCCTGAAGGAGTTCAACGCGTCCTGCTCGG
AGGAGGACTGCGGGACGGCGTTGGTGTCCCAGGAAGACGCCGGAAAGTCG
TTCATCGCCCTCCAGCTGCCAACCACCCGCTCGATCAACGAACACATGGC
CAACCAGATCTTCGACGTCTTGGAGAGAGGGAGTGAGTTGCTCGAGGGAT
CGAGCCTCTTGGGTGTCGGGTTGGTTGCGACTACTGTTGGGCACGCGGGC
GTTTCGTTCGGGTTGGTTCGGGGTATATGCGTAGCGCACCCCGTGACTCC
ATTGGACGGTAATCTTCTTCCGTGTCATGACGAGGGATTCCGTAACTGA

Synonyms

The feature 'Ec-00_006890.2' has the following synonyms


Synonym
Esi0524_0002
Esi_0524_0002