Ec-00_006860.2 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_006860.2
Unique NameEc-00_006860.2
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length154
Homology
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BLAST of Ec-00_006860.2 vs. uniprot
Match: D7G3R0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3R0_ECTSI)

HSP 1 Score: 201 bits (510), Expect = 1.570e-55
Identity = 137/179 (76.54%), Postives = 139/179 (77.65%), Query Frame = 2 
Query: 2198 MYQVCARGTGSIGSSG*PNSRVMDGLREMAGGQG----WHGSGEDGMSNPAPVPRLRPFSVGEEAVTGGEEETKESDSPQQDGNDGDLSRDMVDQDXXXXXXXXXXXXXXXXXXXIDDEEEGGDNEGGEPRVSEDDQKTYEALTKAIMDRRPRSGVAELVGKSVTGGWLGQRDHMKEVS 2722
            MYQVCARGTGSIGS                GG G    W G  E   +  +P P  R        VTGGEEETKESDSPQQDGNDGDLSRDMVDQDXXXXXXXXXXXXXXXXXXXIDDEEEGGDNEGGEPRVSEDDQKTYEALTKAIMDRRPRSGVAELVGKSVTGGWLGQRDHMKEVS
Sbjct:    1 MYQVCARGTGSIGSRWIAQLESDGRPARDGGGAGLAWVWRGRHEQSRARASPSPVFR------RRVTGGEEETKESDSPQQDGNDGDLSRDMVDQDXXXXXXXXXXXXXXXXXXXIDDEEEGGDNEGGEPRVSEDDQKTYEALTKAIMDRRPRSGVAELVGKSVTGGWLGQRDHMKEVS 173
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BLAST of Ec-00_006860.2 vs. uniprot
Match: D7FM56_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM56_ECTSI)

HSP 1 Score: 184 bits (466), Expect = 2.810e-49
Identity = 117/162 (72.22%), Postives = 124/162 (76.54%), Query Frame = -3 
Query: 1402 MPRHCV-VFLLVCNAQACLAFVPSWTATFRSSRSQPPTSTPAAATSSLSQPSGTTCLVLGTFGACGARMVYPVRGITSLSALSEGNEEEGGGDHDTREAAGGSPAADEIRAVQXXXXXXXXXXEDVVKETKKVAKKIDDVEAAIAGGSGYLGMTDPEALLRK 1884
            M R+CV V LLV  AQACLAFVPSWTATFRSSRSQPP STPAAAT SLSQPSG  C V G    CGA+  YPV G+TSLSA+SEG EEEGGGDH  REAA GSPAADEIRAVQXXXXXXXXXX              D +EAAIAGGS YLGMTDPEALL++
Sbjct:    1 MSRNCVSVLLLVGIAQACLAFVPSWTATFRSSRSQPPASTPAAATFSLSQPSGPICPVFGACDTCGAQFFYPVPGMTSLSAMSEGGEEEGGGDHHAREAADGSPAADEIRAVQXXXXXXXXXXXXXXXXXXXXXXXTDGIEAAIAGGSRYLGMTDPEALLKQ 162
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BLAST of Ec-00_006860.2 vs. uniprot
Match: D7FWN5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWN5_ECTSI)

HSP 1 Score: 175 bits (443), Expect = 9.930e-46
Identity = 118/144 (81.94%), Postives = 121/144 (84.03%), Query Frame = 2 
Query: 2288 GGQGWHGSGEDGMSNPAPVPRLRPFSVGEEAVTGGEEETKESDSPQQDGNDGDLSRDMVDQDXXXXXXXXXXXXXXXXXXXIDDEEEGGDNEGGEPRVSEDDQKTYEALTKAIMDRRPRSGVAELVGKSVTGGWLGQRDHMKEV 2719
            GG G   SGEDGMSNPAPVPRLRPFSVGEEAVTGGEEETKESDSPQ+DGN            XXXXXXXXXXXXXXXXXXXIDDEEEGGDNEGGEPRVSEDDQKTYEALTKAI+DR PRSGVAELVGKSV  GWLGQ+D    V
Sbjct:   36 GGAGLAWSGEDGMSNPAPVPRLRPFSVGEEAVTGGEEETKESDSPQEDGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDDEEEGGDNEGGEPRVSEDDQKTYEALTKAIIDRLPRSGVAELVGKSVRDGWLGQKDQRSIV 179
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BLAST of Ec-00_006860.2 vs. uniprot
Match: A0A6H5KLR4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLR4_9PHAE)

HSP 1 Score: 165 bits (417), Expect = 2.860e-41
Identity = 81/121 (66.94%), Postives = 95/121 (78.51%), Query Frame = 1 
Query: 3019 ADLVNVTYPAGDINLDAH*RRLVYNIGGWLLSSALSRVKRQPRLGRAFMPFVNSHKFKSAQDFRSANPEFQGLEFEVDQRNV*YEGKGLVFPTAEFYLFVRALEVGYRSAMLNPTLLATYL 3381
            A LV V YPA D++LD H RRLVYNI GWLLSSALSRV RQ  LG AF+PF NSHK  SA++FR A P F GLEF V++RN  +EGKGL+F +A+F+LFVRALE GYRS++LNP LLA  L
Sbjct:  149 AHLVKVAYPAEDVDLDVHQRRLVYNIAGWLLSSALSRVSRQRSLGSAFLPFFNSHKVASAEEFREAYPHFSGLEFVVEERNNPWEGKGLIFASADFFLFVRALESGYRSSLLNPALLAAPL 269
[Close]
BLAST of Ec-00_006860.2 vs. uniprot
Match: D7G3Q8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Q8_ECTSI)

HSP 1 Score: 125 bits (313), Expect = 2.730e-29
Identity = 79/96 (82.29%), Postives = 83/96 (86.46%), Query Frame = -3 
Query: 1399 MVYPVRGITSLSALSEGNEEEGGGDHDTREAAGGSPAADEIRAVQXXXXXXXXXXEDVVKETKKVAKKIDDVEAA-IAGGSGYLGMTDPEALLRKR 1683
            MVYPVRGITSLSALSEGNEE+GGGDHDTREAAGGSPAADEIRAVQXXXXXXXXXX            KIDDVEAA IAGGSGYLGMTDPEALL+++
Sbjct:    1 MVYPVRGITSLSALSEGNEEDGGGDHDTREAAGGSPAADEIRAVQXXXXXXXXXXXXXXXXXXXXXXKIDDVEAATIAGGSGYLGMTDPEALLKEK 96
[Close]
BLAST of Ec-00_006860.2 vs. uniprot
Match: D8LPP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPP1_ECTSI)

HSP 1 Score: 121 bits (303), Expect = 7.690e-28
Identity = 63/94 (67.02%), Postives = 72/94 (76.60%), Query Frame = -3 
Query: 1402 MVYPVRGITSLSALSEGNEEEGGGDHDTREAAGGSPAADEIRAVQXXXXXXXXXXEDVVKETKKVAKKIDDVEAAIAGGSGYLGMTDPEALLRK 1683
            M YPVRG+T LSA+SEG+EEEGGGDH  REAA   PAADEIRAVQ          ED  +ET +V KKIDD+EAAIAGG+ YLGMTDPEALL++
Sbjct:    1 MFYPVRGMTGLSAMSEGDEEEGGGDHHAREAADRLPAADEIRAVQDEIRGVERKIEDAEEETAEVVKKIDDIEAAIAGGARYLGMTDPEALLKQ 94
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BLAST of Ec-00_006860.2 vs. uniprot
Match: D7G8Q1_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Q1_ECTSI)

HSP 1 Score: 115 bits (288), Expect = 3.940e-25
Identity = 62/87 (71.26%), Postives = 69/87 (79.31%), Query Frame = -3 
Query: 1402 ITSLSALSEGNEEEGGGDHDTREAAGGSPAADEIRAVQXXXXXXXXXXEDVVKETKKVAKKIDDVEAAIAGGSGYLGMTDPEALLRK 1662
            +TSLSA+SEG+EEEGGGDHD REAA   PAADEIRAVQ         XED  KET +V KKIDD+EAAIAGGS YLGMTDPEALL++
Sbjct:    1 MTSLSAMSEGDEEEGGGDHDAREAADRIPAADEIRAVQDDIRGVERKXEDAEKETAEVVKKIDDIEAAIAGGSRYLGMTDPEALLKQ 87
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BLAST of Ec-00_006860.2 vs. uniprot
Match: D7G515_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G515_ECTSI)

HSP 1 Score: 101 bits (252), Expect = 4.260e-21
Identity = 68/94 (72.34%), Postives = 76/94 (80.85%), Query Frame = -3 
Query: 1402 ITSLSALSEGNEEEGGGDHDTREAAGGSPAADEIRAVQXXXXXXXXXXEDVV-------KETKKVAKKIDDVEAAIAGGSGYLGMTDPEALLRK 1662
            +TS SA+SEG+EEEGGGDHD REAA GSPAADEIRAVQXXXXXXXXXX           +ET +V KKID +EAAIAGGS YLGMTDPEALL++
Sbjct:    1 MTSSSAMSEGDEEEGGGDHDAREAADGSPAADEIRAVQXXXXXXXXXXXXXXXXXXXAEEETAEVVKKIDYIEAAIAGGSKYLGMTDPEALLKQ 94
[Close]
BLAST of Ec-00_006860.2 vs. uniprot
Match: A0A6H5KW14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW14_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 1.450e-15
Identity = 60/182 (32.97%), Postives = 91/182 (50.00%), Query Frame = 1 
Query: 3016 EADLVNVTYPAGDINLDAH*RRLVYNIGGWLLSSALSRVKRQPRLGRAFMPFVNSHKFKSAQDFRSANPEFQGLEFEVDQRNV*YEGKGLVFPTAEFYLFVRALEVGYRSAMLNPTLLATYLGDLPAEVRRVVSTADPVKAAWATCVGLVKDLNLGAAGGEGCIEQCDELFDFMMTKWRNGR 3561
            +++ V +TYP     +     +++Y I GWLLS A SR +R     + +   V  +   S+      +P  Q +  EVD RN    G GL+FPT  +Y FV  +E G    + +P  L TYLGDL AE+ RVV+ +  V+ AWA C        +     E   E  D+++ F++ K+ N R
Sbjct:  120 KSNTVALTYPTEIHKISTARGKVLYYIAGWLLSKAWSRKRRHNIPDQEWDFIVQHNHSPSSAGAIERDPILQDMVGEVDARNDPVNGAGLLFPTLAWYEFVFHVENGIYHFLRDPYFLGTYLGDLSAEILRVVTESSEVRRAWAKCCPSA----VAPPPFEAQPEILDDIYKFVLQKFHNVR 297
[Close]
BLAST of Ec-00_006860.2 vs. uniprot
Match: D8LM87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM87_ECTSI)

HSP 1 Score: 80.5 bits (197), Expect = 6.760e-15
Identity = 37/40 (92.50%), Postives = 37/40 (92.50%), Query Frame = 3 
Query:  813 MKRFLPPTGGSSDTSTGKKTCGEPTCKHKSLLITAIHECN 932
            MKRFLPPTGGSSDTSTGKKTCGEPTCKHKSLLITAI   N
Sbjct:    1 MKRFLPPTGGSSDTSTGKKTCGEPTCKHKSLLITAIRAGN 40
The following BLAST results are available for this feature:
BLAST of Ec-00_006860.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D7G3R0_ECTSI1.570e-5576.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FM56_ECTSI2.810e-4972.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FWN5_ECTSI9.930e-4681.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KLR4_9PHAE2.860e-4166.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3Q8_ECTSI2.730e-2982.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LPP1_ECTSI7.690e-2867.02Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G8Q1_ECTSI3.940e-2571.26Uncharacterized protein n=3 Tax=Ectocarpus silicul... [more]
D7G515_ECTSI4.260e-2172.34Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KW14_9PHAE1.450e-1532.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LM87_ECTSI6.760e-1592.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:10826582..10833036 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Length4617
Hectar predicted targeting categoryother localisation
Gene idEc-00_006860.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_006860Ec-00_006860Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 10826582..10833036 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_006860.2Ec-00_006860.2Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 10829619..10830892 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_006860.2.1Ec-00_006860.2.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 10826582..10828823 +
Ec-00_006860.2.2Ec-00_006860.2.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 10829596..10829729 +
Ec-00_006860.2.3Ec-00_006860.2.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 10829914..10829995 +
Ec-00_006860.2.4Ec-00_006860.2.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 10830489..10830631 +
Ec-00_006860.2.5Ec-00_006860.2.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 10830767..10831152 +
Ec-00_006860.2.6Ec-00_006860.2.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 10831407..10833036 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0068605UTR:Ec-00_006860.2Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_00 10826582..10828823 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_006860.2CDS:Ec-00_006860.2Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 10829619..10829729 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0068603UTR:Ec-00_006860.2Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_00 10830893..10831152 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_006860.2 ID=Ec-00_006860.2|Name=Ec-00_006860.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=154bp
MDGLREMAGGQGWHGSGEDGMSNPAPVPRLRPFSVGEEAVTGGEEETKES
DSPQQDGNDGDLSRDMVDQDEEDDEEMEELIRAVTGVEGIDDEEEGGDNE
GGEPRVSEDDQKTYEALTKAIMDRRPRSGVAELVGKSVTGGWLGQRDHMK
EVS*
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spliced messenger RNA

>Ec-00_006860.2 ID=Ec-00_006860.2|Name=Ec-00_006860.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=4617bp|location=Sequence derived from alignment at chr_00:10826582..10833036+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
GGGAGGGTGTGAGGAAGGCTGTGGGTGCATGTGCTCAAAATTCTGGAGCA
GCTCATGTGGGCGACCGAACTTGTGTGTGAAGAACGCACAAACACTCGAA
AACTTGCTTGGAGTACACAACCAGTGTGGGGAAGGGAACTGAGAATGCGG
CGGCTTCTCAACCGCAGGCGTTTACCAAGACAGCCGTGCTTCTATTATTT
TCGGTAAATGCTGTCAATCTCCCCCACTAGACTACATCAATGTCCCGCGG
TTATATACGCCGGTCGCCCCGGTGGTCTAGTTGGTATCCACGCAAACTTT
CTAAGAACCAGGTCATGGGTTCAAGCCCCGACGAAAGGAGTTTATTCTCA
CAGTCGTTCCTGGAAAATTGAAAGCGATTTCGCGGGGATTTCGCCGGTAA
ATACATACTTCGACTGAAGTGTACCGAAGGCGAAGGTGGGGAATGCTGCA
CCCTGCTGGCGGAAAAATAAACAGGCGCGTACCGCAGGTGGGGATCCAAC
CCCCGCTCCTGTGTGACCCCGGTTGGGTCGTCTAGCTAGTCGTGGTGGAG
GGTGGGGGCCAGTGGGGCAGACGACAGAAGCCAATACAGTCGACCCCGCT
TTAAGGACGCTCGTAGTAAGGAAACCCCCCGCTTCAAGGACGACTTTTTT
CCAGATCCGAGGGGGCCGACAGACAGTACAAATAAAGGGGTATATACAGT
TTCTATTCTGCGAACCCCCCTTTTTTCACCTGTGGAGTGCTATGTTGGGT
TCATCACACGCGCAACGATATAGAGCGCGGTCTGCTGCTGCTGCTGTTGG
TACACACATGCACATGAAGAGATTCCTACCGCCTACCGGAGGTTCCTCTG
ATACAAGCACCGGCAAGAAAACATGTGGGGAACCAACGTGCAAGCACAAG
TCTCTGCTGATCACAGCAATCCACGAGTGCAATGGGAAGGACCAAAAAAA
TTAAAATATGTATGAGCAGAGGAAAACTTGTCACAGCGTTCTGCAGCCAA
GTGGGACACGAAAAGGTCGTACATACTGTCGTTGCTGAGGAGTGTGGATC
TACCATTACGTCCGCAGGTTGCTTTGAAGAGGAGGCGAGTTGCCCGTGCA
AAAAAACAGCACTACGAATGTACCCGCTACCAAAGTACTACTCCTGGATT
GTTTTCAAATGGTCTGCTTTTTTTGTTGCGGGCGACTTGCATGCTTTTCC
TACACTGTAAACTGCTGCATGGATCTTCGCACATAATGGGACGCTTCCGT
ACCTGCTGGGGCGTTGTTGGCACGGCGCTGCTCAATACTGAAGAGCCTTT
TCTCCTTCACAAGGACCTGCTCGCGTAGTTGCCCCTCCTTACTGCGTAGT
TGCTTCTTCTCGTCGCGTAGTTGCTTCTTCTCGTCGCCTAGTCGCTCCTT
CTCTTTCTCAACAGGGCTTCGGGGTCGGTCATTCCGAGGTACCCGGAGCC
CCCAGCAATAGCAGCCTCAACATCATCAATCTTCTTGGCTACCTTTTTCG
TCTCCTTCACTACATCCTCGATGTTAAGCTCGACCGCACGGATCTCATCC
TGGACTGCACGGATCTCATCCGCCGCCGGACTGCCGCCGGCCGCTTCTCG
CGTATCATGATCGCCGCCCCCCTCCTCCTCGTTGCCCTCGCTCAGCGCGC
TCAAGCTCGTGATCCCTCGCACCGGGTAAACCATGCGCGCCCCACAAGCG
CCAAACGTCCCGAGCACAAGGCAGGTCGTACCAGAGGGCTGTGAGAGCGA
AGACGTCGCCGCCGCAGGCGTTGAAGTAGGGGGCTGCGAGCGTGACGACC
TGAACGTCGCAGTCCAGCTCGGGACGAAGGCCAGGCATGCTTGAGCGTTA
CAAACCAGGAGAAAAACCACACAATGCCTTGGCATGGTAGCGTAGAATAG
TTGCCCCGTCAGGCAAGAGGGGGCGGCCAGCAGCAGGAAGCCGGCGGCGG
CGAGGGCGGATATCTGCCTCTTGCCTCTCTGCGGGAGGGGGCGGGCGTCG
GGTGGCAAAGACTATGACAATAATGACATAGGCAACGCACTACAGGAAAT
TCCTTTAGAAAAGCAGTTCACCACTTTCGGGTCTAAAAAACTGCCGCGAG
AATACGTGGAAACCCCCCGAGTGCACCCCACAAAGGCGAGCAGCCGTCTA
TCAGGAGGCGGTAGCTACTCGTCAGTGTGCAAGGACGTCAGTTCATATAT
GTACCAAGTTTGTGCAAGAGGAACGGGCTCCATCGGTAGCAGGTGGATAG
CCCAACTCGAGAGTGATGGACGGCCTGCGCGAGATGGCGGGGGGGCAGGG
CTGGCATGGGTCTGGAGAGGACGGCATGAGCAATCCCGCGCCCGTGCCTC
GCCTTCGCCCGTTTTCCGTCGGAGAGGAAGCAGTAACCGGAGGGGAAGAA
GAGACGAAAGAATCCGACAGTCCCCAACAGGATGGAAACGACGGAGACTT
GAGTAGAGACATGGTTGATCAAGACGAAGAAGACGACGAGGAGATGGAGG
AACTTATCCGGGCGGTCACCGGGGTCGAGGGGATAGACGACGAGGAGGAG
GGCGGTGATAACGAAGGAGGAGAGCCTCGTGTTTCAGAAGACGACCAAAA
GACCTATGAAGCTCTGACCAAGGCCATCATGGATAGGCGGCCCAGGAGCG
GGGTGGCGGAGTTGGTGGGGAAATCGGTCACGGGTGGCTGGTTGGGGCAA
AGGGATCACATGAAAGAAGTATCGTGAAAGTGCTCGAGGTGGAGGCTGTG
CGTTCCGCGATTCGTCGATGGCGGGATTTCCTCGTTGCATTGCTGGTGGA
AAATTCCAAGAAGCCGTTTTCGTCGGCTCTCGCGCTAGAGTACGAGAAGG
CACGGAGGACAAAGCGTTTTGATGCGCAACGTGAATTCAGCCACGAGTCG
ACTATCAGAGACGCGGCGATCAAGTCGGGTCTGGAAGAGCGGCGTGTCAC
CCATGCTCTCACTTCCGTCTTATACGCCATCGACCAGGATGTTGACAAGA
CCATCACGCAAAATTGAGCGAAGCTGATCTCGTCAATGTGACGTATCCTG
CCGGCGACATTAACCTGGACGCCCATTAACGGCGTCTTGTGTACAACATA
GGGGGGTGGCTGTTAAGTAGCGCTCTTTCACGCGTTAAGAGGCAGCCCCG
TCTTGGCAGAGCGTTCATGCCCTTTGTCAACAGCCACAAGTTCAAATCCG
CTCAGGATTTCCGGAGTGCCAATCCCGAGTTTCAAGGTTTGGAATTCGAG
GTCGACCAGAGAAACGTTTAGTATGAAGGGAAGGGTCTCGTTTTTCCAAC
GGCGGAATTCTATCTTTTCGTGCGTGCGCTTGAGGTTGGGTACAGATCGG
CGATGCTAAATCCCACCCTGTTGGCGACGTACCTCGGGGATTTACCAGCG
GAAGTTAGGAGGGTGGTGTCCACGGCGGATCCCGTGAAGGCGGCATGGGC
TACGTGTGTGGGTCTGGTGAAGGACCTAAACCTCGGCGCCGCTGGGGGGG
AGGGTTGCATAGAGCAATGCGACGAGCTGTTCGATTTCATGATGACAAAG
TGGCGGAATGGCCGCTTTTTTTTCCTTCACAATAGAACTGACAAGCTTGA
AGAAGACGTTGAAAAACAGGAAAGCACAGATGGCGCTGAGAGATCACTTG
AAGGCGGGGGTTGGCAAGGGTAAGGGCGGTGGTCGTGCGCCTGCACAAAG
GGCGGCAAAATCCAAGGAGCCCAAGGTGTACACCACTGAACAGAGAAAGC
GCCAGTTGCAGCTCAACGAAATTACCGGGGTTGATGCATGGCGGAGTCTA
ACGTGTGACCACCTCAAAGAGTATATCAAAGAATGCGGCGGCACGGTGCC
GAACCCACCCCTTAAGGCCGATCTCTAGAAAGCGTTGCGCAAGCTCGCAC
CACGAGCGGGGGTAGACAGCGACCCTAGCCTGGCAGCTCTTCGGCTGTCG
ATTATCGTTCCGGATGACTGGTATGGATGAGTACAAACAGTAGGCGTTGT
CATGCTGTGTCGTGTCTGTGTTGCCGATGGAGGGGGTAAGAAGGGGTTAA
TGTGGGTTGCGGGAAGTCCCCGACACGACTTCAAGAGCAGATATGGTCGG
GGTTTTATGTTCAGCTGTGTGGCGGTTTGGTGTGCAGAAGAAGCACAAAA
CAAGACAAGATTGGGTCAATGGAGTGGGACGTAGAGAGGGGTCATCACCC
GATGTGCGAGGGTCACCGAGCTCAACATATGTGTGCGTGCGTGTGCCGTC
TCTTTTTTCACTGCCCTGGTGTTCGGTCTATCGGCATAGCTATTTTACCT
GCATCGCAAACGGCTTGAGGCAGTTACATGAGTCCAATGCCCGGGTGGGG
CTGGACGGCTCCGAAAATTACCACCTATGTACCAGTAGTGGATTTGGACC
AAAGGAAATCACCCCCCAACATGTTTGGTCGGCTCGGTACGTCGAATCGC
CCTTCCTTCAACTGCCATCAGCATCCTCACGTGCGTGGAAACATGGTCGG
TGAAAGAGGGCAGAGAATCAGCGTTGGTGTGATGGCTGGGGCCACGAGCC
CTCAGTGAAGAGCTGCGGTCTACGGTTTTGTCTCACGAGCAACATTGAAC
CCAGACTAGTCCAGGAC
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protein sequence of Ec-00_006860.2

>Ec-00_006860.2 ID=Ec-00_006860.2|Name=Ec-00_006860.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=154bp
MDGLREMAGGQGWHGSGEDGMSNPAPVPRLRPFSVGEEAVTGGEEETKES
DSPQQDGNDGDLSRDMVDQDEEDDEEMEELIRAVTGVEGIDDEEEGGDNE
GGEPRVSEDDQKTYEALTKAIMDRRPRSGVAELVGKSVTGGWLGQRDHMK
EVS*
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mRNA from alignment at chr_00:10826582..10833036+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_006860.2 ID=Ec-00_006860.2|Name=Ec-00_006860.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=6455bp|location=Sequence derived from alignment at chr_00:10826582..10833036+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
GGGAGGGTGTGAGGAAGGCTGTGGGTGCATGTGCTCAAAATTCTGGAGCA
GCTCATGTGGGCGACCGAACTTGTGTGTGAAGAACGCACAAACACTCGAA
AACTTGCTTGGAGTACACAACCAGTGTGGGGAAGGGAACTGAGAATGCGG
CGGCTTCTCAACCGCAGGCGTTTACCAAGACAGCCGTGCTTCTATTATTT
TCGGTAAATGCTGTCAATCTCCCCCACTAGACTACATCAATGTCCCGCGG
TTATATACGCCGGTCGCCCCGGTGGTCTAGTTGGTATCCACGCAAACTTT
CTAAGAACCAGGTCATGGGTTCAAGCCCCGACGAAAGGAGTTTATTCTCA
CAGTCGTTCCTGGAAAATTGAAAGCGATTTCGCGGGGATTTCGCCGGTAA
ATACATACTTCGACTGAAGTGTACCGAAGGCGAAGGTGGGGAATGCTGCA
CCCTGCTGGCGGAAAAATAAACAGGCGCGTACCGCAGGTGGGGATCCAAC
CCCCGCTCCTGTGTGACCCCGGTTGGGTCGTCTAGCTAGTCGTGGTGGAG
GGTGGGGGCCAGTGGGGCAGACGACAGAAGCCAATACAGTCGACCCCGCT
TTAAGGACGCTCGTAGTAAGGAAACCCCCCGCTTCAAGGACGACTTTTTT
CCAGATCCGAGGGGGCCGACAGACAGTACAAATAAAGGGGTATATACAGT
TTCTATTCTGCGAACCCCCCTTTTTTCACCTGTGGAGTGCTATGTTGGGT
TCATCACACGCGCAACGATATAGAGCGCGGTCTGCTGCTGCTGCTGTTGG
TACACACATGCACATGAAGAGATTCCTACCGCCTACCGGAGGTTCCTCTG
ATACAAGCACCGGCAAGAAAACATGTGGGGAACCAACGTGCAAGCACAAG
TCTCTGCTGATCACAGCAATCCACGAGTGCAATGGGAAGGACCAAAAAAA
TTAAAATATGTATGAGCAGAGGAAAACTTGTCACAGCGTTCTGCAGCCAA
GTGGGACACGAAAAGGTCGTACATACTGTCGTTGCTGAGGAGTGTGGATC
TACCATTACGTCCGCAGGTTGCTTTGAAGAGGAGGCGAGTTGCCCGTGCA
AAAAAACAGCACTACGAATGTACCCGCTACCAAAGTACTACTCCTGGATT
GTTTTCAAATGGTCTGCTTTTTTTGTTGCGGGCGACTTGCATGCTTTTCC
TACACTGTAAACTGCTGCATGGATCTTCGCACATAATGGGACGCTTCCGT
ACCTGCTGGGGCGTTGTTGGCACGGCGCTGCTCAATACTGAAGAGCCTTT
TCTCCTTCACAAGGACCTGCTCGCGTAGTTGCCCCTCCTTACTGCGTAGT
TGCTTCTTCTCGTCGCGTAGTTGCTTCTTCTCGTCGCCTAGTCGCTCCTT
CTCTTTCTCAACAGGGCTTCGGGGTCGGTCATTCCGAGGTACCCGGAGCC
CCCAGCAATAGCAGCCTCAACATCATCAATCTTCTTGGCTACCTTTTTCG
TCTCCTTCACTACATCCTCGATGTTAAGCTCGACCGCACGGATCTCATCC
TGGACTGCACGGATCTCATCCGCCGCCGGACTGCCGCCGGCCGCTTCTCG
CGTATCATGATCGCCGCCCCCCTCCTCCTCGTTGCCCTCGCTCAGCGCGC
TCAAGCTCGTGATCCCTCGCACCGGGTAAACCATGCGCGCCCCACAAGCG
CCAAACGTCCCGAGCACAAGGCAGGTCGTACCAGAGGGCTGTGAGAGCGA
AGACGTCGCCGCCGCAGGCGTTGAAGTAGGGGGCTGCGAGCGTGACGACC
TGAACGTCGCAGTCCAGCTCGGGACGAAGGCCAGGCATGCTTGAGCGTTA
CAAACCAGGAGAAAAACCACACAATGCCTTGGCATGGTAGCGTAGAATAG
TTGCCCCGTCAGGCAAGAGGGGGCGGCCAGCAGCAGGAAGCCGGCGGCGG
CGAGGGCGGATATCTGCCTCTTGCCTCTCTGCGGGAGGGGGCGGGCGTCG
GGTGGCAAAGACTATGACAATAATGACATAGGCAACGCACTACAGGAAAT
TCCTTTAGAAAAGCAGTTCACCACTTTCGGGTCTAAAAAACTGCCGCGAG
AATACGTGGAAACCCCCCGAGTGCACCCCACAAAGGCGAGCAGCCGTCTA
TCAGGAGGCGGTAGCTACTCGTCAGTGTGCAAGGACGTCAGTTCATATAT
GTACCAAGTTTGTGCAAGAGGAACGGGCTCCATCGGTAGCAGGTGCGTTG
AGAAAATATGAAAAACCTTTCCGCCGCTTCAATTAGGGGGTAGGCCAAGG
GTAGGCTGCAGCAGCGAGTTGACTGGTTCCATGGCCGCCGCTCTCGACTT
CTAGGGCAAACGGTACGCAGCGGTCGGACAGGCAGGTAGCTTTACAGGTT
TCCTCTGATCCTGCAAAGTGTCGTACAAAGCGATGAGCACTTCGGTTGGT
TAGGCAGAAAAATCTGTCATTTTTGGTTCAAATTGAACCGCCGCTTGAAG
TCACAGCAGCATTCAGCAGCAGCGAGTTGACTGGGTCCATGGCTGCCGCT
CTCGACTTCTAGGGCAAACGGCACACAGCGGTTGGTACAGATGGGCAGCC
ATACAAGGGTTCTCGTACATCGCAAAGTATAGCGTTAAACGATGAGTACT
TCTTTTGGAACTGGGGGGAAACGTGGCTGATTTTGTTCAGAGTCGGCGGT
GTATCCTGGCATGCCACCTTGGCACACCCGTCATGTTCCAACTGCTGTGC
CAGCCTCTCTTCGGCATGAAAAAAAAATACTGTTTCATTTTCTCACGCGC
ATGGATGTATTTTGGCTAGGGTTAGGGACTCGACGAACCGCAGCAGCAGC
AGTACAGCAGTACGGATGTGTTGCTTCCACGTCCCACAAGCCCCGCCTGC
TCTGCGTGGCCCTAGTCAACATCCTTCCTTCGGTTGCTAAAAAGAAAAAC
GGCTCGATATGGGAGTCCCATGCCTCTCTCTTCACTCCCGTTTGCTCTGA
AAAACACGCAGTAGGTGGATAGCCCAACTCGAGAGTGATGGACGGCCTGC
GCGAGATGGCGGGGGGGCAGGGCTGGCATGGGTCTGGAGAGGACGGCATG
AGCAATCCCGCGCCCGTGCCTCGCCTTCGCCCGTTTTCCGTCGGAGAGGT
ATGCATTTTTCACGGTAGGGTTTGCGTTGATAACGTTGCTGAGGCGTGCG
ACGTCTTCGTGTATGCTGTTGGCTACACCGATGTATATTGTTTAGCCCAT
GGTTTACAGCGTATGGTTAGTGTCAAAGTAGCGCTTGAACATATTCCGCC
CTGCCTCATACCCCATGAATGCGGTCGCACAGGAAGCAGTAACCGGAGGG
GAAGAAGAGACGAAAGAATCCGACAGTCCCCAACAGGATGGAAACGACGG
AGACTTGAGTAGAGGTGAGGCGAACACGATTTTGGTAAGGGTGCTGGCCT
TGCCGATCTCGTCGGCGGACGCGGCCGCCATTGACCGGAAGTTGTTCCCC
GATAGTGTCGGCATAATAAGTTCGTGCAGACCAAGAATGCCATGTCGTTG
GGTAGGGCATTCCTTACGCATCTCTCCTTGGTGTTCTTCAGCCTTAAGCT
TCGAAAATTCCCACAATCAACGACCCCGGGCTGCTACCACCGAATCATAA
CTTCTTACATCGGCAGCGATCCTCGGGCCTGCGCGGCTATCACCACCTCC
GAATATTTATGAACGGGTGCTCCCGCTATTCTTCGAAACGCGTGTCTACG
ACCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCCTTCACCACTTACATTTT
CACGCAGACATGGTTGATCAAGACGAAGAAGACGACGAGGAGATGGAGGA
ACTTATCCGGGCGGTCACCGGGGTCGAGGGGATAGACGACGAGGAGGAGG
GCGGTGATAACGAAGGAGGAGAGCCTCGTGTTTCAGAAGACGACCAAAAG
GTGAGGTTGTGTAGGACAGAGTCGTCTCGATGTCCACTGCGTTAGCCTCG
CCATTCCCTTTGGCAAACCTGCGTCGTGTTCTCACTCCAATATATATTGA
TGTCTCCATTTCGGTTGTGTGTTTCTGCACGGCAGACCTATGAAGCTCTG
ACCAAGGCCATCATGGATAGGCGGCCCAGGAGCGGGGTGGCGGAGTTGGT
GGGGAAATCGGTCACGGGTGGCTGGTTGGGGCAAAGGGATCACATGAAAG
AAGTATCGTGAAAGTGCTCGAGGTGGAGGCTGTGCGTTCCGCGATTCGTC
GATGGCGGGATTTCCTCGTTGCATTGCTGGTGGAAAATTCCAAGAAGCCG
TTTTCGTCGGCTCTCGCGCTAGAGTACGAGAAGGCACGGAGGACAAAGCG
TTTTGATGCGCAACGTGAATTCAGCCACGAGTCGACTATCAGAGACGCGG
CGATCAAGTCGGGTCTGGAAGAGCGGCGTGTCACCCATGCTCTCACTTCC
GTCTTATACGCCATCGACCAGGTTGGCCTGCCTATCATGCGTGCTTCGGA
CACAGGTGTCTAGTGATGGTGAAGACTGCGTGTGCGTGTGCGGGATTATT
GGCATCAACCGATGGGAATATGTCAGTCTCAGTGCGGAATAAGACACAAA
TGCTTCTAAGGCCGTGATCTGGTATCCCGTGTGTAGGTGTGTGCGTTTGT
GTGTATGTCGACCTTGAAGTGTATGTCTGTAATCTTGTTAACCCTTACAT
CCCCCGTGATTAATATTTCAAACAGGATGTTGACAAGACCATCACGCAAA
ATTGAGCGAAGCTGATCTCGTCAATGTGACGTATCCTGCCGGCGACATTA
ACCTGGACGCCCATTAACGGCGTCTTGTGTACAACATAGGGGGGTGGCTG
TTAAGTAGCGCTCTTTCACGCGTTAAGAGGCAGCCCCGTCTTGGCAGAGC
GTTCATGCCCTTTGTCAACAGCCACAAGTTCAAATCCGCTCAGGATTTCC
GGAGTGCCAATCCCGAGTTTCAAGGTTTGGAATTCGAGGTCGACCAGAGA
AACGTTTAGTATGAAGGGAAGGGTCTCGTTTTTCCAACGGCGGAATTCTA
TCTTTTCGTGCGTGCGCTTGAGGTTGGGTACAGATCGGCGATGCTAAATC
CCACCCTGTTGGCGACGTACCTCGGGGATTTACCAGCGGAAGTTAGGAGG
GTGGTGTCCACGGCGGATCCCGTGAAGGCGGCATGGGCTACGTGTGTGGG
TCTGGTGAAGGACCTAAACCTCGGCGCCGCTGGGGGGGAGGGTTGCATAG
AGCAATGCGACGAGCTGTTCGATTTCATGATGACAAAGTGGCGGAATGGC
CGCTTTTTTTTCCTTCACAATAGAACTGACAAGCTTGAAGAAGACGTTGA
AAAACAGGAAAGCACAGATGGCGCTGAGAGATCACTTGAAGGCGGGGGTT
GGCAAGGGTAAGGGCGGTGGTCGTGCGCCTGCACAAAGGGCGGCAAAATC
CAAGGAGCCCAAGGTGTACACCACTGAACAGAGAAAGCGCCAGTTGCAGC
TCAACGAAATTACCGGGGTTGATGCATGGCGGAGTCTAACGTGTGACCAC
CTCAAAGAGTATATCAAAGAATGCGGCGGCACGGTGCCGAACCCACCCCT
TAAGGCCGATCTCTAGAAAGCGTTGCGCAAGCTCGCACCACGAGCGGGGG
TAGACAGCGACCCTAGCCTGGCAGCTCTTCGGCTGTCGATTATCGTTCCG
GATGACTGGTATGGATGAGTACAAACAGTAGGCGTTGTCATGCTGTGTCG
TGTCTGTGTTGCCGATGGAGGGGGTAAGAAGGGGTTAATGTGGGTTGCGG
GAAGTCCCCGACACGACTTCAAGAGCAGATATGGTCGGGGTTTTATGTTC
AGCTGTGTGGCGGTTTGGTGTGCAGAAGAAGCACAAAACAAGACAAGATT
GGGTCAATGGAGTGGGACGTAGAGAGGGGTCATCACCCGATGTGCGAGGG
TCACCGAGCTCAACATATGTGTGCGTGCGTGTGCCGTCTCTTTTTTCACT
GCCCTGGTGTTCGGTCTATCGGCATAGCTATTTTACCTGCATCGCAAACG
GCTTGAGGCAGTTACATGAGTCCAATGCCCGGGTGGGGCTGGACGGCTCC
GAAAATTACCACCTATGTACCAGTAGTGGATTTGGACCAAAGGAAATCAC
CCCCCAACATGTTTGGTCGGCTCGGTACGTCGAATCGCCCTTCCTTCAAC
TGCCATCAGCATCCTCACGTGCGTGGAAACATGGTCGGTGAAAGAGGGCA
GAGAATCAGCGTTGGTGTGATGGCTGGGGCCACGAGCCCTCAGTGAAGAG
CTGCGGTCTACGGTTTTGTCTCACGAGCAACATTGAACCCAGACTAGTCC
AGGAC
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Coding sequence (CDS) from alignment at chr_00:10826582..10833036+

>Ec-00_006860.2 ID=Ec-00_006860.2|Name=Ec-00_006860.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=462bp|location=Sequence derived from alignment at chr_00:10826582..10833036+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGACGGCCTGCGCGAGATGGCGGGGGGGCAGGGCTGGCATGGGTCTGG
AGAGGACGGCATGAGCAATCCCGCGCCCGTGCCTCGCCTTCGCCCGTTTT
CCGTCGGAGAGGAAGCAGTAACCGGAGGGGAAGAAGAGACGAAAGAATCC
GACAGTCCCCAACAGGATGGAAACGACGGAGACTTGAGTAGAGACATGGT
TGATCAAGACGAAGAAGACGACGAGGAGATGGAGGAACTTATCCGGGCGG
TCACCGGGGTCGAGGGGATAGACGACGAGGAGGAGGGCGGTGATAACGAA
GGAGGAGAGCCTCGTGTTTCAGAAGACGACCAAAAGACCTATGAAGCTCT
GACCAAGGCCATCATGGATAGGCGGCCCAGGAGCGGGGTGGCGGAGTTGG
TGGGGAAATCGGTCACGGGTGGCTGGTTGGGGCAAAGGGATCACATGAAA
GAAGTATCGTGA
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Synonyms
The feature 'Ec-00_006860.2' has the following synonyms
Synonym
Esi0521_0014
Esi_0521_0014