Ec-00_006550.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_006550.1
Unique NameEc-00_006550.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length302
Homology
[Close]
BLAST of Ec-00_006550.1 vs. uniprot
Match: D7G3E6_ECTSI (MYND-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3E6_ECTSI)

HSP 1 Score: 602 bits (1553), Expect = 5.850e-212
Identity = 301/301 (100.00%), Postives = 301/301 (100.00%), Query Frame = 1 
Query:  178 MGTEGQGSTSATPTSATATEPKEEEGVKGDKTAVVSGEVCESIKKGMRIISDIEKTRADGMVFKFELDLMYALAGEKATARAPPGLCLASCQRAACNKTEEPTGRPFCCCSKCGAKYCSRECQVIDWKKDHKAMCGQLKEMRGGDAGGGRAPLDRQSVVARVLGRVRLYLCPFAVCHGEALGRGFVFVQTPNPVLELEYLRPVNSNGRRLDRSIILHFLSMGEFVDAVLQDDFELGVIRSPLEAAVESYDTKAEMVVLFRARCGYMAVVVVPLVPGWAVCRQLGLEYKEKDALQLNLDDTD 1080
            MGTEGQGSTSATPTSATATEPKEEEGVKGDKTAVVSGEVCESIKKGMRIISDIEKTRADGMVFKFELDLMYALAGEKATARAPPGLCLASCQRAACNKTEEPTGRPFCCCSKCGAKYCSRECQVIDWKKDHKAMCGQLKEMRGGDAGGGRAPLDRQSVVARVLGRVRLYLCPFAVCHGEALGRGFVFVQTPNPVLELEYLRPVNSNGRRLDRSIILHFLSMGEFVDAVLQDDFELGVIRSPLEAAVESYDTKAEMVVLFRARCGYMAVVVVPLVPGWAVCRQLGLEYKEKDALQLNLDDTD
Sbjct:    1 MGTEGQGSTSATPTSATATEPKEEEGVKGDKTAVVSGEVCESIKKGMRIISDIEKTRADGMVFKFELDLMYALAGEKATARAPPGLCLASCQRAACNKTEEPTGRPFCCCSKCGAKYCSRECQVIDWKKDHKAMCGQLKEMRGGDAGGGRAPLDRQSVVARVLGRVRLYLCPFAVCHGEALGRGFVFVQTPNPVLELEYLRPVNSNGRRLDRSIILHFLSMGEFVDAVLQDDFELGVIRSPLEAAVESYDTKAEMVVLFRARCGYMAVVVVPLVPGWAVCRQLGLEYKEKDALQLNLDDTD 301
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BLAST of Ec-00_006550.1 vs. uniprot
Match: A0A835Z3P7_9STRA (MYND-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3P7_9STRA)

HSP 1 Score: 309 bits (791), Expect = 2.490e-97
Identity = 151/271 (55.72%), Postives = 196/271 (72.32%), Query Frame = 1 
Query:  262 GDKTAVVSGEVCESIKKGMRIISDIEKTRADGMVFKFELDLMYALAGEKATARAPPGLCLASCQRAACNKTEEPTGRPFCCCSKCGAKYCSRECQVIDWKKDHKAMCGQLKEMRGGDAGGGRAPLDRQSVVARVLGRVRLYLCPFAVCHGEALGRGFVFVQTPNPVLELEYLRPVNSNGRRLDRSIILHFLSMGEFVDAVLQDDFELGVIRSPLEAAVESYDTKAEMVVLFRARCGYMAVVVVPLVPGWAVCRQLGLEYKEKDALQLNLDD 1074
            G K  + + E+   +++G+ I+  IE  RADGMVF FE DL++ L+G+KA A+APPGL L  CQ+  C  TE   G+PF  CS CG++YC RECQV DWK  HK MC QLK +  G      A +D++  V+R L +VRLYLCPFAVCHG A+G GFVFVQ+PN +LEL Y+ PV S GR L RS++LH++S GEFV+AV+QDDFEL  +R+PLEAA+ + D + E+VVL RARCGY+ VV +PLVP  AVCR L  +Y+ +DALQLNLD+
Sbjct:   13 GSKKKIGTKELEAKVQEGLDIVQQIETGRADGMVFHFEGDLLFELSGDKAVAKAPPGLQLHKCQKPTCENTETMGGKPFNQCSGCGSRYCCRECQVSDWKSLHKPMCAQLKALSAG------AKVDKRDAVSRTLSKVRLYLCPFAVCHGSAIGPGFVFVQSPNSLLELNYMGPVTSAGRALQRSLVLHYMSPGEFVEAVMQDDFELMTVRTPLEAAIAAADAQREVVVLMRARCGYICVVTMPLVPEIAVCRALAGDYEGRDALQLNLDE 277
[Close]
BLAST of Ec-00_006550.1 vs. uniprot
Match: A0A7S0UGY3_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UGY3_9STRA)

HSP 1 Score: 161 bits (408), Expect = 8.460e-42
Identity = 85/198 (42.93%), Postives = 125/198 (63.13%), Query Frame = 1 
Query:  505 CSKCG-AKYCSRECQVIDWKKD-HKAMCGQLKEMRGGDAGGGRAPL---DRQSVVARVLGRVRLYLCPFAVCHGEALGRGFVFVQTPNPVLELEYLRPVNSNGRRLDRSIILHFLSMGEFVDAVLQDDFELGVIRSPLEAAVESYDTKAEMVVLFRARCGYMAVVVVPLVPGWAVCRQLGLEYKEKD---ALQLNLDD 1074
            CSKCG A YCSRECQ+ DWK   HK  C     +        +APL    ++++   +  R+R Y+CP+AV     LGRGF+F+QT   + ++    P +  G  + RS++LHFL++GEF   V + DFEL ++R+PL+ AVE+YDT+ E+V+L R RCG M++    LVP + +C++LG +Y  ++   ALQLNLDD
Sbjct:   56 CSKCGVAAYCSRECQIQDWKAGRHKMACPSYARVA-------KAPLCDKTKETIRNELFARIRFYVCPYAVFRTAELGRGFLFLQTDRTLEDMSLYIPKDCTGHTITRSVLLHFLTLGEFDSEVCRTDFELALMRTPLKEAVETYDTEQEVVLLCRYRCGNMSLGRAALVPDYRICKKLGQDYYSENSAGALQLNLDD 246
[Close]
BLAST of Ec-00_006550.1 vs. uniprot
Match: A0A448ZP53_9STRA (MYND-type domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZP53_9STRA)

HSP 1 Score: 157 bits (398), Expect = 2.920e-40
Identity = 89/212 (41.98%), Postives = 125/212 (58.96%), Query Frame = 1 
Query:  463 CNKTEEPTGRPFCCCSKCG-AKYCSRECQVIDWKKD-HKAMCGQLKEMRGGDAGGGRAPLD---RQSVVARVLGRVRLYLCPFAVCHGEALGRGFVFVQTPNPVLELEYLRPVNSNGRRLDRSIILHFLSMGEFVDAVLQDDFELGVIRSPLEAAVESYDTKAEMVVLFRARCGYMAVVVVPLVPGWAVCRQLGLEY---KEKDALQLNLDD 1074
            C K  E   R    C++CG A YCSRECQ  DWK   HK  C     +        + PLD   ++++   +  R+R Y+CP+AV     LG GF+F+Q+   + +L    P +  GR + RS++LHFL++GEF   V +DDFEL ++R+PL+ AVESYD + E+V+L R RCG MA+    LVP + +C+QL  +Y       ALQLNLDD
Sbjct:   56 CGKPAEKLSR----CARCGVAAYCSRECQAGDWKAGRHKMACPSYARVA-------KTPLDGDTKKAIRNELFARIRFYVCPYAVHRTAELGSGFLFLQSDRTLRDLSPYIPKDCTGRAIVRSVLLHFLTLGEFDSEVCKDDFELAMMRTPLKEAVESYDPEKEVVLLCRFRCGNMALGRAVLVPDYPICKQLAKDYYTGNTAGALQLNLDD 256
[Close]
BLAST of Ec-00_006550.1 vs. uniprot
Match: A0A1E7FEW3_9STRA (MYND-type domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FEW3_9STRA)

HSP 1 Score: 153 bits (387), Expect = 4.230e-39
Identity = 81/200 (40.50%), Postives = 123/200 (61.50%), Query Frame = 1 
Query:  508 SKCG----AKYCSRECQVIDWKKD-HKAMCGQLKEMRGGDAGGGRAPLD---RQSVVARVLGRVRLYLCPFAVCHGEALGRGFVFVQTPNPVLELEYLRPVNSNGRRLDRSIILHFLSMGEFVDAVLQDDFELGVIRSPLEAAVESYDTKAEMVVLFRARCGYMAVVVVPLVPGWAVCRQLGLEYKEKD---ALQLNLDD 1074
            SKCG    A YCSR+CQ+ DWK   HK  C     +        + P+    +Q +   +  R+R Y+CP+AV     LGRGF+F+QT   + +L    P +  G  + RSI+LHFL++GEF   V ++DFEL ++R+PL+ A++SY+T+ E+V+L R RCG M++    LVP + +C++LG +Y  ++   A+QLNLDD
Sbjct:   34 SKCGKCQVAAYCSRDCQMSDWKTGRHKMACPSYARVA-------QTPISDKTKQEIRNELFQRIRFYVCPYAVLRTSELGRGFLFLQTDKTLQDLSVYIPKDCTGHTVTRSILLHFLTLGEFDSEVCKEDFELAMMRTPLKDAIDSYETEKEVVILCRFRCGNMSLGKAILVPDYGICKKLGQDYYAENPAGAVQLNLDD 226
[Close]
BLAST of Ec-00_006550.1 vs. uniprot
Match: A0A7S2R2L0_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R2L0_9STRA)

HSP 1 Score: 151 bits (382), Expect = 9.460e-38
Identity = 89/219 (40.64%), Postives = 125/219 (57.08%), Query Frame = 1 
Query:  484 TGRPFCCCSKCG-AKYCSRECQVIDWKKD------HKAMCGQLKEMRGGDAGGGRAPLDRQSVVARVLGRVRLYLCPFAVCHGEALGRGFVFVQTPNPVLELEY---LRPVNSNGRRL------DRSIILHFLSMGEFVDAVLQDDFELGVIRSPLEAAVESYDTKAEMVVLFRARCGYMAVVVVPLVPGWAVCRQLGLEY------KEKDALQLNLDD 1074
            T  P   CSKC  A+YCSR+CQV DWKK       HK  C  LK +  G      +P D+ S    ++ R+R Y CP+AV     LGRGF+F+Q  + + E+     L P+++            RS++LH+L++GEF   V +DDFEL  +R  L+ AV+S+D + +MVVL R RCG++AV   PLVP + +C+ LG +Y          A+QLNLDD
Sbjct:   65 TSTPLSECSKCHVARYCSRDCQVADWKKSPNGGTAHKFTCAALKRV--GIHMQITSPDDQASARQDIVFRIRFYACPYAVNKSITLGRGFLFLQGTSTLAEMSLPTTLNPLHNXXXXXXXXXVKQRSVLLHYLTLGEFDSEVCRDDFELATVRDRLKQAVDSHDIEKDMVVLMRFRCGHVAVGTAPLVPDYGLCKSLGQQYYGTGEGASSGAIQLNLDD 281
[Close]
BLAST of Ec-00_006550.1 vs. uniprot
Match: A0A1Z5JUW9_FISSO (MYND-type domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JUW9_FISSO)

HSP 1 Score: 147 bits (370), Expect = 1.180e-36
Identity = 87/196 (44.39%), Postives = 122/196 (62.24%), Query Frame = 1 
Query:  505 CSKCG-AKYCSRECQVIDWKKDHKAMCGQLKEMRGGDAGGGRAPLDRQSVVAR--VLGRVRLYLCPFAVCHGEALGRGFVFVQTPNPVLELEYLRPVNSNGRRLDRSIILHFLSMGEFVDAVLQDDFELGVIRSPLEAAVESYDTKAEMVVLFRARCGYMAVVVVPLVPGWAVCRQLGLEYKEK---DALQLNLDD 1074
            CS+C  A YCS+ECQ+ DWK+ HK  C   + +   DA G     D  S  AR  VL ++RLY  P+AV   +ALGRGF+F+Q+       + L  +   GR  +RS++LH+L++GE+   V +DDFEL  +R+ L+ AV  YD + +MVVL R RCG++AV ++PL   +AVC QLG EY +     AL+L LDD
Sbjct:   48 CSQCHVATYCSKECQIQDWKQRHKKYCAAYQRI---DAQGRWNTPDDDSAHARHHVLHQIRLYAMPYAVYQMQALGRGFLFIQST------QTLAALTLPGR--NRSVLLHYLTLGEYDAEVCRDDFELTAVRTCLQKAVNDYDAQQQMVVLMRFRCGHVAVGIIPLSLEFAVCLQLGKEYYQNVTAGALELQLDD 232
[Close]
BLAST of Ec-00_006550.1 vs. uniprot
Match: A0A2R5G8A5_9STRA (SET and MYND domain-containing protein DDB_G0277331 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G8A5_9STRA)

HSP 1 Score: 147 bits (372), Expect = 1.600e-36
Identity = 87/249 (34.94%), Postives = 136/249 (54.62%), Query Frame = 1 
Query:  370 FELDLMYALAGEKATARAPPGLCLASCQRAAC-------NKTEEPTGRPFCCCSKCGAKYCSRECQVIDWKKDHKAMCGQLKEMRGGDAGGGRAPLDRQS--VVARVLGRVRLYLCPFAVCHGEALGRGFVFVQTPNPVLELEYLRPVNSNGRRLDRSIILHFLSMGEFVDAVLQDDFELGVIRSPLEAAVESYDTKAEMVVLFRARCGYMAVVVVPLVPGWAVCRQLGLEYKEKDA---LQLNLDDTD 1080
            FE +L Y + G  A A +       +C RA         ++ E  T +    C+ C   YCSRECQV  WK  HK  C  +   + G       P   Q+  VV  +L R+R+Y+CPFA       G+GFV +++ + + +  Y  P+++ G+ L RS+ L +L++GEF     +DDFEL  +R  LE A+E+Y+ + ++VV+   +CG+ A V +P+VP +A+ +QL   YK  +    LQLN+DD+D
Sbjct:   26 FEDNLKYDVGGADAAATSGLRCANHTCSRAGAEAATTEGDEEETATKKKQMRCAACQTCYCSRECQVKSWKTGHKRECPVVAAFKAG------TPTAEQTHTVVEDMLRRIRMYMCPFAAGFSLLHGKGFVLLRSNSTLQQWVYEFPMDAEGQPLRRSVQLQYLTLGEFDGLAFEDDFELAAVRPKLEEALEAYEVQTQVVVVIVLKCGFFACVTIPMVPEFAIGKQLAAMYKYVEMEGPLQLNVDDSD 268
[Close]
BLAST of Ec-00_006550.1 vs. uniprot
Match: B8BQB8_THAPS (MYND-type domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BQB8_THAPS)

HSP 1 Score: 147 bits (371), Expect = 2.640e-36
Identity = 88/222 (39.64%), Postives = 126/222 (56.76%), Query Frame = 1 
Query:  463 CNKTEEPTGRP-FCCCSKCG-AKYCSRECQVIDWKKD-----HKAMCGQLKEMRGGDAGGGRAPL-----DRQSVVARVLGRVRLYLCPFAVCHGEALGRGFVFVQTPNPVLELEYLRPVNSNGRRL--DRSIILHFLSMGEFVDAVLQDDFELGVIRSPLEAAVESYDTKAEMVVLFRARCGYMAVVVVPLVPGWAVCRQLGLEY----KEKDALQLNLDD 1074
            C K+ E  G P    CSKCG A YCSR+CQV +WK       HK +C   K +       G   +     D+ S    +L R+R Y  P++V     +GRGF+F+Q+ + +  L    P  SNG++    RS++LH+L+M EF   V  +DFEL  ++  L++AVESY+ + E+ VL R RCG++AV + PLVP   +C+ LG EY    K   A+QLN+DD
Sbjct:   60 CGKSAEEGGVPKLSRCSKCGVACYCSRDCQVTNWKGGDGVVGHKFLCAAYKRV-------GEDMMIIFSDDKDSARQDILSRIRFYAFPYSVHKSSIVGRGFLFLQSDSSLAVLSLPAPTMSNGKKYPKQRSVLLHWLTMKEFSSEVCMEDFELASVQKELKSAVESYNEEVEVPVLMRFRCGHVAVGIAPLVPDIKLCKMLGKEYYGSGKGSGAVQLNIDD 274
[Close]
BLAST of Ec-00_006550.1 vs. uniprot
Match: B7G058_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G058_PHATC)

HSP 1 Score: 144 bits (362), Expect = 1.730e-35
Identity = 76/197 (38.58%), Postives = 121/197 (61.42%), Query Frame = 1 
Query:  505 CSKCG-AKYCSRECQVIDWK-KDHKAMCGQLKEMRGGDAGGGRAPLDRQSVVARVLGRVRLYLCPFAVCHGEALGRGFVFVQTPNPVLELEYLRPVNSNGRRLD-RSIILHFLSMGEFVDAVLQDDFELGVIRSPLEAAVESYDTKAEMVVLFRARCGYMAVVVVPLVPGWAVCRQLGLEYKEKD---ALQLNLDDT 1077
            C++C  A YC R+CQV DWK   HK  C     +  G +       D+Q     + GR+R Y+CP+AV     LGRGF+F+Q+   +  +    P +S GR  D R++++++L++GEF   V ++DFE+  +R+ L+ AVE+YD + E+V+L R RCG++++    LVP   VC++LG++Y  +    ALQLN+DD+
Sbjct:   44 CARCKVATYCQRDCQVEDWKIGKHKLACQSYARV--GPSMQIDDENDKQQACNELFGRIRFYVCPYAVHKATTLGRGFLFIQSDRTLATMSLTLPKDSYGRPTDNRALLIYYLTLGEFDAEVCREDFEMATVRTKLQEAVENYDEEDEIVILMRFRCGHVSLGTSALVPDHRVCKKLGIDYYSESTAAALQLNIDDS 238
The following BLAST results are available for this feature:
BLAST of Ec-00_006550.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
D7G3E6_ECTSI5.850e-212100.00MYND-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A835Z3P7_9STRA2.490e-9755.72MYND-type domain-containing protein n=1 Tax=Tribon... [more]
A0A7S0UGY3_9STRA8.460e-4242.93Hypothetical protein n=1 Tax=Pseudo-nitzschia deli... [more]
A0A448ZP53_9STRA2.920e-4041.98MYND-type domain-containing protein n=1 Tax=Pseudo... [more]
A0A1E7FEW3_9STRA4.230e-3940.50MYND-type domain-containing protein (Fragment) n=1... [more]
A0A7S2R2L0_9STRA9.460e-3840.64Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A1Z5JUW9_FISSO1.180e-3644.39MYND-type domain-containing protein n=1 Tax=Fistul... [more]
A0A2R5G8A5_9STRA1.600e-3634.94SET and MYND domain-containing protein DDB_G027733... [more]
B8BQB8_THAPS2.640e-3639.64MYND-type domain-containing protein n=1 Tax=Thalas... [more]
B7G058_PHATC1.730e-3538.58Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:10429890..10434728 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score604.4
Seed ortholog evalue3e-170
Seed eggNOG ortholog2880.D7G3E6
Length1961
Hectar predicted targeting categoryother localisation
Gene idEc-00_006550.1
EggNOG OGs2CYFZ@1,2S44W@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_006550Ec-00_006550Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 10429890..10434728 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_006550.1Ec-00_006550.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 10430767..10434550 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_006550.1.5Ec-00_006550.1.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 10429890..10430964 -
Ec-00_006550.1.4Ec-00_006550.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 10431504..10431644 -
Ec-00_006550.1.3Ec-00_006550.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 10432707..10432904 -
Ec-00_006550.1.2Ec-00_006550.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 10433257..10433409 -
Ec-00_006550.1.1Ec-00_006550.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 10434335..10434728 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0065503UTR:Ec-00_006550.1Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_00 10429890..10430766 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_006550.1CDS:Ec-00_006550.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 10430767..10430964 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0065505UTR:Ec-00_006550.1Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_00 10434551..10434728 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_006550.1 ID=Ec-00_006550.1|Name=Ec-00_006550.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=302bp
MGTEGQGSTSATPTSATATEPKEEEGVKGDKTAVVSGEVCESIKKGMRII
SDIEKTRADGMVFKFELDLMYALAGEKATARAPPGLCLASCQRAACNKTE
EPTGRPFCCCSKCGAKYCSRECQVIDWKKDHKAMCGQLKEMRGGDAGGGR
APLDRQSVVARVLGRVRLYLCPFAVCHGEALGRGFVFVQTPNPVLELEYL
RPVNSNGRRLDRSIILHFLSMGEFVDAVLQDDFELGVIRSPLEAAVESYD
TKAEMVVLFRARCGYMAVVVVPLVPGWAVCRQLGLEYKEKDALQLNLDDT
D*
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spliced messenger RNA

>Ec-00_006550.1 ID=Ec-00_006550.1|Name=Ec-00_006550.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1961bp|location=Sequence derived from alignment at chr_00:10429890..10434728- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
CCCCCCGGGTGTCTCTTCACCCCCTCCGTCTGCCCCAACCGCTGCCGGTA
TTTCGTCACGAGGGACGTACCATAAGAGACAGGGACAGAGGCGCCCCGAG
AGGCTCCTGGAGAGAATCAGCAGCAGAGGGAACGAGTCTGCTGGCGAGGA
GGAAAGTGTGCCAAAAAGCGAGGTCGACATGGGTACGGAAGGGCAAGGTA
GCACGTCGGCGACACCCACGTCTGCAACAGCGACGGAACCCAAAGAGGAG
GAGGGCGTCAAGGGTGACAAGACTGCTGTTGTGTCGGGGGAGGTCTGCGA
GAGCATCAAGAAGGGCATGCGGATAATCAGCGACATAGAGAAGACGCGCG
CGGACGGCATGGTATTTAAATTTGAGCTGGATCTCATGTATGCGCTGGCA
GGAGAGAAGGCCACCGCACGCGCTCCGCCGGGGCTATGCTTGGCGAGTTG
TCAACGTGCTGCGTGCAACAAGACGGAGGAGCCCACGGGGCGTCCGTTTT
GCTGCTGCTCCAAGTGCGGCGCCAAGTACTGCAGCCGGGAGTGTCAGGTG
ATCGACTGGAAGAAGGATCACAAGGCCATGTGCGGCCAGCTGAAGGAGAT
GCGAGGCGGGGACGCGGGGGGTGGCCGGGCGCCGCTCGACAGACAGAGCG
TGGTGGCGAGGGTTCTCGGGCGGGTGCGGCTCTACCTGTGTCCGTTCGCG
GTGTGCCACGGGGAGGCGCTCGGTAGAGGCTTCGTTTTCGTACAGACACC
GAACCCCGTGCTGGAGCTGGAGTACTTGCGACCCGTCAACAGCAACGGGC
GCAGGCTTGACCGCAGCATCATCCTCCACTTCCTGAGCATGGGAGAGTTC
GTGGACGCCGTTCTGCAGGACGACTTTGAACTCGGGGTGATCAGAAGTCC
CCTCGAGGCCGCCGTGGAGTCTTACGACACCAAGGCCGAGATGGTGGTGC
TGTTCAGGGCCCGCTGCGGCTACATGGCGGTCGTGGTCGTGCCGCTCGTG
CCGGGGTGGGCCGTGTGCCGCCAGCTGGGGCTGGAGTACAAGGAAAAGGA
CGCGCTGCAGCTCAATCTCGACGACACAGATTGATAAATAGTACTTCGTA
GTCGTTATTGTCTCTTGATGGAACAATCACATAAAATCAGATCGCGCCGG
GGTAACAGGCACATTGCGCTTGCGTGTGTATGTATCCGGCATGGGCGCGC
GGGGGGGGGCGGGGCACCGAGGAGGAGGTGTACACTCTGGTGTGGTGTCG
AGGGCAAGCGTCCGGCCGTGGGATTCCGACTGCCCTTCTCGGTCGACACG
CCAGACATCCGACGTCGTAGTGTCAGCGGCTGCCGGTGACGCTCCTGTTA
TTCTCCTCGTCATCGCGAGAGCCTGGGGTTTGGGGCGCGGGGACCAGTGG
CGGTGGTGCCGCTTCCTGAAATGTTAGTAGGTAGCCCTCCCTATTGTAGT
ATAGTGGTTTGCCTTTTTCACGAGGGTAGAGGCCAGTGCGGTTCCTGTGG
TGTGGTGTGTTGCAGTTAGAGGATGTACGGCATGTATTTTGTTGTGCGCA
GTTTGTGTGTTGCCGTGTTACCCGTTTGATTGGGTGTTCTCTTCCTTCTT
GCGTTTCGTGACGACAGCAGGATTTTATTGTACCTCCGCTTCCAATGGAG
AACAGGCAGTTGGCGAAAAGAGCAATTCCATCGAAGTAGGGCGACCTAGT
ATTACAGATTCCTTCGACCACGACCTCCACCCCGAAAGCGGTGCTTATTA
TCAGATGTGTCCTTTCTTCGTGTTGTCGCTTGTTACCCCCGGGGGAGATT
GTCATGCCCACGATTGATTGCACCACATGGTCCTGGCGCGTGTTCACTCT
TCCCACTTGAATCGAGAACCCAAAACGAGAATAGGCACACTGCTGCGTGC
CCTCCATGGAGACTGCGTGCAAGAGGCAGAATTCTTCCTTTTGCCTGCTA
TCGCCCCCCCC
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protein sequence of Ec-00_006550.1

>Ec-00_006550.1 ID=Ec-00_006550.1|Name=Ec-00_006550.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=302bp
MGTEGQGSTSATPTSATATEPKEEEGVKGDKTAVVSGEVCESIKKGMRII
SDIEKTRADGMVFKFELDLMYALAGEKATARAPPGLCLASCQRAACNKTE
EPTGRPFCCCSKCGAKYCSRECQVIDWKKDHKAMCGQLKEMRGGDAGGGR
APLDRQSVVARVLGRVRLYLCPFAVCHGEALGRGFVFVQTPNPVLELEYL
RPVNSNGRRLDRSIILHFLSMGEFVDAVLQDDFELGVIRSPLEAAVESYD
TKAEMVVLFRARCGYMAVVVVPLVPGWAVCRQLGLEYKEKDALQLNLDDT
D*
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mRNA from alignment at chr_00:10429890..10434728-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_006550.1 ID=Ec-00_006550.1|Name=Ec-00_006550.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=4839bp|location=Sequence derived from alignment at chr_00:10429890..10434728- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
CCCCCCGGGTGTCTCTTCACCCCCTCCGTCTGCCCCAACCGCTGCCGGTA
TTTCGTCACGAGGGACGTACCATAAGAGACAGGGACAGAGGCGCCCCGAG
AGGCTCCTGGAGAGAATCAGCAGCAGAGGGAACGAGTCTGCTGGCGAGGA
GGAAAGTGTGCCAAAAAGCGAGGTCGACATGGGTACGGAAGGGCAAGGTA
GCACGTCGGCGACACCCACGTCTGCAACAGCGACGGAACCCAAAGAGGAG
GAGGGCGTCAAGGGTGACAAGACTGCTGTTGTGTCGGGGGAGGTCTGCGA
GAGCATCAAGAAGGGCATGCGGATAATCAGCGACATAGAGAAGACGCGCG
CGGACGGCATGGTATTTAAATTTGAGCTGGATCTCATGTATGCGGTGAGA
AAGCGGCGGGGGCAGGGAGCAGGGAGAGGGCGAGAGAGACACAAGAGAAA
GCGAGAGAACCCACGGCCCCAACCTCGTAGTTATTGCACGGCAGCTCTGT
AGCTCTGTAGCTGCACTAATACCAGATCTTTTTTGTATATGCAACCCCAT
CCCGCACACAAATCACGCAACATGTACATCATGCATGGCGGTCGTCGTTG
TCCGTGTCGCCTGCTCTGTGCCGGCTTCGGTAAGCAGCGCAGAGGCCCCG
CCTTTCTATCTACTGCTCCAGCCGAACGGCAGCAGCCGACGAGCCCAATG
TTCCGTTGCGGTCTACGTTTGCTGTACTTGTACTCAAAGACCAATAGATT
TTTGAAGCGGCTCGAAAGGGGTCAACCTGAGCAATCGCGACGTTAACCTA
AGCAGTATCTACTGCTGTACAGCAGTAGTCTACAACATGTTGGCTACAGG
AGGACCTGCTACTGCTGGTAGAGCTGGCGCATCTACAGTACATTTATAGA
TAGTGCAAAGATAAGAACTAAGCAGGCGTATCTACACATGTAGCCTGCAT
GGAGACCTAAGCAGGTTCATCATACAATGTTACACGCGCACCCGTCACCG
TCAAACACGTACGACCAACGTGTGATGGGGGTCAAATCGAAAGCTTGTGT
CTGTCGGCCTCCATGCATGATCCGTTCTTGGAGTCCACCAGCCAATCGCA
TAAAATGCTTAAATAGTCACAGCAGCCCAGTGTAGCATTGTGCACAGCAA
CTCCTCGCGCGCCTTTCCATTTTAGCTGAAATCATCAAATCGTCGGAAAT
ATCGACGCGACCGGCACAGCACACTACGCCGCCAACACGTACCCCCAGCT
GGCTGCCCAACCGCGCCACACTTATCTCGATTCCGTCTCCTTCCGGCTTC
TTTCTTTTTTTTTGCTCAGCTGGCAGGAGAGAAGGCCACCGCACGCGCTC
CGCCGGGGCTATGCTTGGCGAGTTGTCAACGTGCTGCGTGCAACAAGACG
GAGGAGCCCACGGGGCGTCCGTTTTGCTGCTGCTCCAAGTGCGGCGCCAA
GTACTGCAGCCGGGAGTGTCAGGTGACTAAAGTATTCACACCTTCTCCGT
ATCCTAGATACCTTCCACGTCCTACCACCCGTCCCCCGCCCCCGGGCTCT
GGCCTCGCGGTCACAGCACTTGCGGTTTGCCACTACTGCTGCGGCTCTAG
TGCTGCGGCTCTAGTGCTGACACTGGTGGACTCATCCCGCTTGGGAATCC
CAGCTTGCTACCAACAATATCGCTCTATGGATGAGATTTTCCGGCGAAGA
CATGAAAAAAAACGCCCGTTTAGATACTATCGTGTACTTCGACAATGGCG
TCACTCTCTCGCGGCATTCTTCAATTCGCTTCCTTTTCTTTCGGTGGTGC
ACGTGGTGAAAAATGTCGCGAAAGGTGATCGACTGGAAGAAGGATCACAA
GGCCATGTGCGGCCAGCTGAAGGAGATGCGAGGCGGGGACGCGGGGGGTG
GCCGGGCGCCGCTCGACAGACAGAGCGTGGTGGCGAGGGTTCTCGGGCGG
GTGCGGCTCTACCTGTGTCCGTTCGCGGTGTGCCACGGGGAGGCGCTCGG
TAGAGGCTTCGTTTTCGTACAGGTAAAACAATCGGTGACGTCATAATTCT
CTTCCACGTTTTTTTGCTTTCTCTTTGGGTTGAAAACGAACTGCTACAGT
GCAGTACAGTACCACTGCCTCCCACTGACACGTCAAGGTCAAAGAAGCAT
ATTGTGCACACGTCATATGGGAGTGAAATCTTATGTACACTTTTCGAATT
TCTGCGACGATTGTACGCATATCTACTGCTGCGCGACCGCACAACCATTG
CGTTGCGGGGTATTGAGTTTAGGGTTCTGTATGCAAAACGTAGAAGGGAT
TCCATTCCTTCTAGAAGGAGCGGGGAGGTGTAACTCCCCGATGGAAGGAC
GAATCAGGGGACAGGATCCAGTAGCCCCTGCTTGAGGGAACCGATCCTGC
CCCACCGGTGTCGTTCCTACCGGTTGACAGGGCAACAGCTGCACTGCTGT
TCCACACGAGCTACTGTAGTACAGATGGGTTCTTCATCACGGGTCTTCCA
GATCGCCCTTAGTTCTGTTACACTTGGCGTTATCGGCATACGGAGTTGCG
CTTTCTGGTGCTATTTTTCGTGTCTGCTTGGTGTAAGTTGCTTGTTTTTT
GAACAAGTTGCTGCCCTTGCTTGCTCGTCAGCCACAGCTTTTGCGCGTTG
CTTTCGTTTGCTTGGTACATGTGTCTCACCGTAGGGTCGGTCCGTCAGAC
TATCCTTCGGCAAGCCCTGCGCCTTCTGAGCGTTCGGGTTTCATCTGTGT
CTTTTGCTCATGTAGCGTAAGGGATGCAACAGGAATGGTCCCCAGCTTGA
CCACGGGCGTCGGTGGTGACCATGGTTGAACGAGTGATGAGGTCGAGGAG
GTGGCGGTTGCGAAGCTCGGCTGCTTCAAGACGAGGCAAGGCGTTGGCAG
CGGCGGCGCGTTCGCGCGAAGAGGAAAGCACGGGAGGGGGTAGGGGCATC
GTGCTCAACGAAACAGCAGGTGGAACAGCGGAGGGATGTGGTGGTAAGGA
GGGGAGCAGGTGCTGTGATACATGTATTAGTAGGTCACACAGCCCACCGA
CCCGGCCCATTCCTATTCCGTCTTGCCGAAGCAGACACCGAACCCCGTGC
TGGAGCTGGAGTACTTGCGACCCGTCAACAGCAACGGGCGCAGGCTTGAC
CGCAGCATCATCCTCCACTTCCTGAGCATGGGAGAGTTCGTGGACGCCGT
TCTGCAGGACGACTTTGAACTCGGGGTGAGTGAAGCCCTTGTCCTACGTG
TTTTGCGCCCCTTTTCCCATGCCCTGGTTGTCGCCGTTGCTATTGTTGGT
GGTGGTGGTGGTCGTGGTTGAAGTTGTGCTGCTGCGTGTAGTCTGCTTCC
ACGGCCACCAAAGCGTTGCCACGCCTCCTCCTTCCCCCCTGCCTCTATCG
GGGAGGCCGCCTCTTTCCGCCCTGCGTGCCTCGCCAATATCCGCCAACAA
GTTAGCAACTGGCGAGAATCAAAGGTTGTATTTTTTCTCGTGTCTTGCAA
GTACGGCTCTTCCCAGTCGAGAGGTCGGACGTTTTTTTTTTGGCGACGTG
TCCTTTTTAGTGAATAGCAGCAACAATACCTAGCTAGCCACACCTTTTAA
GCTTGTTTTCTTCGCAGCAATCAATCCTCCGGGTGCCGTCCCCGTTTGGG
ACTGCGCCTCTCAGGTAAGGTACGTCTCTCGTTTCAAAGCTTTGACCAAA
AAATATGTGATGGAATGTTTGACGATGAGAATGAATATGTCATGAAATGT
TTTATCTTTTCTAGGTGATCAGAAGTCCCCTCGAGGCCGCCGTGGAGTCT
TACGACACCAAGGCCGAGATGGTGGTGCTGTTCAGGGCCCGCTGCGGCTA
CATGGCGGTCGTGGTCGTGCCGCTCGTGCCGGGGTGGGCCGTGTGCCGCC
AGCTGGGGCTGGAGTACAAGGAAAAGGACGCGCTGCAGCTCAATCTCGAC
GACACAGATTGATAAATAGTACTTCGTAGTCGTTATTGTCTCTTGATGGA
ACAATCACATAAAATCAGATCGCGCCGGGGTAACAGGCACATTGCGCTTG
CGTGTGTATGTATCCGGCATGGGCGCGCGGGGGGGGGCGGGGCACCGAGG
AGGAGGTGTACACTCTGGTGTGGTGTCGAGGGCAAGCGTCCGGCCGTGGG
ATTCCGACTGCCCTTCTCGGTCGACACGCCAGACATCCGACGTCGTAGTG
TCAGCGGCTGCCGGTGACGCTCCTGTTATTCTCCTCGTCATCGCGAGAGC
CTGGGGTTTGGGGCGCGGGGACCAGTGGCGGTGGTGCCGCTTCCTGAAAT
GTTAGTAGGTAGCCCTCCCTATTGTAGTATAGTGGTTTGCCTTTTTCACG
AGGGTAGAGGCCAGTGCGGTTCCTGTGGTGTGGTGTGTTGCAGTTAGAGG
ATGTACGGCATGTATTTTGTTGTGCGCAGTTTGTGTGTTGCCGTGTTACC
CGTTTGATTGGGTGTTCTCTTCCTTCTTGCGTTTCGTGACGACAGCAGGA
TTTTATTGTACCTCCGCTTCCAATGGAGAACAGGCAGTTGGCGAAAAGAG
CAATTCCATCGAAGTAGGGCGACCTAGTATTACAGATTCCTTCGACCACG
ACCTCCACCCCGAAAGCGGTGCTTATTATCAGATGTGTCCTTTCTTCGTG
TTGTCGCTTGTTACCCCCGGGGGAGATTGTCATGCCCACGATTGATTGCA
CCACATGGTCCTGGCGCGTGTTCACTCTTCCCACTTGAATCGAGAACCCA
AAACGAGAATAGGCACACTGCTGCGTGCCCTCCATGGAGACTGCGTGCAA
GAGGCAGAATTCTTCCTTTTGCCTGCTATCGCCCCCCCC
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Coding sequence (CDS) from alignment at chr_00:10429890..10434728-

>Ec-00_006550.1 ID=Ec-00_006550.1|Name=Ec-00_006550.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=906bp|location=Sequence derived from alignment at chr_00:10429890..10434728- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGGTACGGAAGGGCAAGGTAGCACGTCGGCGACACCCACGTCTGCAAC
AGCGACGGAACCCAAAGAGGAGGAGGGCGTCAAGGGTGACAAGACTGCTG
TTGTGTCGGGGGAGGTCTGCGAGAGCATCAAGAAGGGCATGCGGATAATC
AGCGACATAGAGAAGACGCGCGCGGACGGCATGGTATTTAAATTTGAGCT
GGATCTCATGTATGCGCTGGCAGGAGAGAAGGCCACCGCACGCGCTCCGC
CGGGGCTATGCTTGGCGAGTTGTCAACGTGCTGCGTGCAACAAGACGGAG
GAGCCCACGGGGCGTCCGTTTTGCTGCTGCTCCAAGTGCGGCGCCAAGTA
CTGCAGCCGGGAGTGTCAGGTGATCGACTGGAAGAAGGATCACAAGGCCA
TGTGCGGCCAGCTGAAGGAGATGCGAGGCGGGGACGCGGGGGGTGGCCGG
GCGCCGCTCGACAGACAGAGCGTGGTGGCGAGGGTTCTCGGGCGGGTGCG
GCTCTACCTGTGTCCGTTCGCGGTGTGCCACGGGGAGGCGCTCGGTAGAG
GCTTCGTTTTCGTACAGACACCGAACCCCGTGCTGGAGCTGGAGTACTTG
CGACCCGTCAACAGCAACGGGCGCAGGCTTGACCGCAGCATCATCCTCCA
CTTCCTGAGCATGGGAGAGTTCGTGGACGCCGTTCTGCAGGACGACTTTG
AACTCGGGGTGATCAGAAGTCCCCTCGAGGCCGCCGTGGAGTCTTACGAC
ACCAAGGCCGAGATGGTGGTGCTGTTCAGGGCCCGCTGCGGCTACATGGC
GGTCGTGGTCGTGCCGCTCGTGCCGGGGTGGGCCGTGTGCCGCCAGCTGG
GGCTGGAGTACAAGGAAAAGGACGCGCTGCAGCTCAATCTCGACGACACA
GATTGA
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Synonyms
The feature 'Ec-00_006550.1' has the following synonyms
Synonym
Esi0509_0005
Esi_0509_0005