Ec-00_006540.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_006540.1
Unique NameEc-00_006540.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length136
Homology
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BLAST of Ec-00_006540.1 vs. uniprot
Match: D7G3E5_ECTSI (Spt4 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3E5_ECTSI)

HSP 1 Score: 293 bits (749), Expect = 1.050e-99
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 2 
Query:   83 MSYNNYGDGLDLEEEGLDEFAGAEIPTSLKGLRACKRCSLVKGNDQFVNHGCENCPFLQMESDQARVQDCTTTYFSGLIAMMDPESSWVGKWQRISECRPGMYAIEVVGELPGEVLEFLEQKRIPFHCKPPDSAK 487
            MSYNNYGDGLDLEEEGLDEFAGAEIPTSLKGLRACKRCSLVKGNDQFVNHGCENCPFLQMESDQARVQDCTTTYFSGLIAMMDPESSWVGKWQRISECRPGMYAIEVVGELPGEVLEFLEQKRIPFHCKPPDSAK
Sbjct:    1 MSYNNYGDGLDLEEEGLDEFAGAEIPTSLKGLRACKRCSLVKGNDQFVNHGCENCPFLQMESDQARVQDCTTTYFSGLIAMMDPESSWVGKWQRISECRPGMYAIEVVGELPGEVLEFLEQKRIPFHCKPPDSAK 135
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BLAST of Ec-00_006540.1 vs. uniprot
Match: A0A835Z5B7_9STRA (Spt4/RpoE2 zinc finger-domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5B7_9STRA)

HSP 1 Score: 148 bits (374), Expect = 1.040e-42
Identity = 66/124 (53.23%), Postives = 87/124 (70.16%), Query Frame = 2 
Query:  104 DGLDLEEEGLDEFAGAEIPTSLKGLRACKRCSLVKGNDQFVNHGCENCPFLQMESDQARVQDCTTTYFSGLIAMMDPESSWVGKWQRISECRPGMYAIEVVGELPGEVLEFLEQKRIPFHCKPP 475
            D  D+E+ G D    A++P  LK LRACKRC+LVK   QF   GCENCPFL++E    RV +CT++YFSG+IAM++P+ SWV +WQRI   +PGMYAIEV+GE P    E++ +  I + CKPP
Sbjct:    9 DEEDVEDAGEDM---AQVPGELKALRACKRCALVKTLTQFTEQGCENCPFLRIEESAERVHECTSSYFSGMIAMLNPKESWVARWQRIRAFKPGMYAIEVIGEFPPHDQEYMAENGIRWQCKPP 129
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BLAST of Ec-00_006540.1 vs. uniprot
Match: A0A7S3LYU5_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3LYU5_9STRA)

HSP 1 Score: 142 bits (357), Expect = 3.040e-40
Identity = 56/109 (51.38%), Postives = 84/109 (77.06%), Query Frame = 2 
Query:  134 DEFAGAEIPTSLKGLRACKRCSLVKGNDQFVNHGCENCPFLQMESDQARVQDCTTTYFSGLIAMMDPESSWVGKWQRISECRPGMYAIEVVGELPGEVLEFLEQKRIPF 460
            +E+  A+IP   KGLRAC RCSL+K  +QF + GCENC F+ +E ++ R+++CTT+YF G IA+++P+ SWV KWQRI++ +PG+YAIE++GELP +V+E  E   +P+
Sbjct:    5 EEYITADIPDEFKGLRACLRCSLIKTFEQFNDKGCENCEFIDLEGNKGRIEECTTSYFEGAIALVEPQGSWVAKWQRIAQYQPGLYAIEMIGELPDDVIEHCENMGLPY 113
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BLAST of Ec-00_006540.1 vs. uniprot
Match: A0A7S2IAX2_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IAX2_9STRA)

HSP 1 Score: 140 bits (354), Expect = 2.090e-39
Identity = 67/137 (48.91%), Postives = 85/137 (62.04%), Query Frame = 2 
Query:   83 MSYNNYGDGLDLEEEGLDE----FAGAEIPTSLKGLRACKRCSLVKGNDQFVNHGCENCPFLQMESDQARVQDCTTTYFSGLIAMMDPESSWVGKWQRISECRPGMYAIEVVGELPGEVLEFLEQKRIPFHCKPPDS 481
            M+Y++   G   EEE L E     A A  P+SL+G+RACKRC ++K  DQF N GCENCPFLQME    R   CTT +F G  A+MDP +SWV KW R+    PG+YAI V G+   E+ E LE +   + C+PP S
Sbjct:   16 MNYHDDEAGEGEEEEELPEQVLNLAQARTPSSLRGMRACKRCGILKTFDQFFNEGCENCPFLQMEGGTERCNRCTTAFFEGQAAVMDPRASWVAKWLRVDAYVPGVYAISVTGQFDREIEEELENRGCRWRCRPPTS 152
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BLAST of Ec-00_006540.1 vs. uniprot
Match: K3WRG9_GLOUD (Spt4 domain-containing protein n=33 Tax=Oomycota TaxID=4762 RepID=K3WRG9_GLOUD)

HSP 1 Score: 134 bits (336), Expect = 5.340e-37
Identity = 60/120 (50.00%), Postives = 80/120 (66.67%), Query Frame = 2 
Query:  113 DLEEEGLDE-FAGAEIPTSLKGLRACKRCSLVKGNDQFVNHGCENCPFLQMESDQARVQDCTTTYFSGLIAMMDPESSWVGKWQRISECRPGMYAIEVVGELPGEVLEFLEQKRIPFHCK 469
            D E++ LD+    A+IP + + LRAC  CSL+K   QF + GCENC FLQM  ++ RV +CT+ YF G+IAMM P+ SWV KWQRI    PG+YA+ V GELP  +  FLE + IP+  +
Sbjct:    8 DEEDDELDDAIVHADIPNTFRELRACMTCSLIKTFTQFYDTGCENCAFLQMADNRQRVAECTSAYFEGMIAMMQPKESWVAKWQRIVRLIPGIYAVSVSGELPESIKRFLEDRNIPYRVQ 127
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BLAST of Ec-00_006540.1 vs. uniprot
Match: B7FXW7_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FXW7_PHATC)

HSP 1 Score: 133 bits (334), Expect = 1.250e-36
Identity = 58/133 (43.61%), Postives = 81/133 (60.90%), Query Frame = 2 
Query:   83 MSYNNYGDGLDLEEEGLDEFAGAEIPTSLKGLRACKRCSLVKGNDQFVNHGCENCPFLQMESDQARVQDCTTTYFSGLIAMMDPESSWVGKWQRISECRPGMYAIEVVGELPGEVLEFLEQKRIPFHCKPPDS 481
            MSY+    G +     + E A A +PT+LK +RACKRC ++K  +QF++ GCENCPFL M  D  +V  CTT ++ G  A+MDP  SW  KW R+    PG+YAI V G    ++ E LE + I + C+PP +
Sbjct:    1 MSYDEDERGEEDVPAQVAELANASVPTNLKAVRACKRCGILKTPEQFLDDGCENCPFLHMADDMQQVNKCTTAFYEGQAAVMDPRDSWAAKWIRVDAYLPGVYAITVTGNFDRDIEEDLENRGIRWRCRPPQN 133
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BLAST of Ec-00_006540.1 vs. uniprot
Match: A0A1Z5KK11_FISSO (Transcription elongation factor SPT4 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KK11_FISSO)

HSP 1 Score: 131 bits (330), Expect = 5.170e-36
Identity = 61/132 (46.21%), Postives = 80/132 (60.61%), Query Frame = 2 
Query:  113 DLEEEGLDE--------FAGAEIPTSLKGLRACKRCSLVKGNDQFVNHGCENCPFLQMESDQARVQDCTTTYFSGLIAMMDPESSWVGKWQRISECRPGMYAIEVVGELPGEVLEFLEQKRIPFHCKPPDSA 484
            D E+E  D+         A A +P +LK +RACKRC L+K   QF + GCENCPFL+M  +  RV  CTT +F G  A+MDP  SW  KW R+    PG+YAI V G+L  +V E LE + I + C+P +SA
Sbjct:    3 DEEDERYDDEVPQQVADLASASVPLNLKTIRACKRCGLLKTQGQFYDEGCENCPFLEMTDNMERVNSCTTAFFEGTAAVMDPGESWAAKWIRVDNYLPGVYAITVTGQLDRDVEEDLENRGIRWRCRPSNSA 134
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BLAST of Ec-00_006540.1 vs. uniprot
Match: W4GN44_9STRA (Spt4 domain-containing protein n=4 Tax=Aphanomyces TaxID=100860 RepID=W4GN44_9STRA)

HSP 1 Score: 129 bits (324), Expect = 3.000e-35
Identity = 56/104 (53.85%), Postives = 73/104 (70.19%), Query Frame = 2 
Query:  149 AEIPTSLKGLRACKRCSLVKGNDQFVNHGCENCPFLQMESDQARVQDCTTTYFSGLIAMMDPESSWVGKWQRISECRPGMYAIEVVGELPGEVLEFLEQKRIPF 460
            AEIPT+ + LRAC  CSLVK   QF   GC+NC FL M+ ++ RV DCTT YF G+IAMM P+ SWV KW+RI +  PG+YA+ V GEL   + +FLE++ I +
Sbjct:   17 AEIPTTFRELRACMICSLVKTYSQFYESGCDNCGFLNMQDNRTRVTDCTTAYFEGMIAMMQPKESWVAKWRRIGKFVPGIYAVAVTGELNDSIKKFLEERNISY 120
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BLAST of Ec-00_006540.1 vs. uniprot
Match: A0A814IDH4_9BILA (Transcription elongation factor SPT4 n=1 Tax=Brachionus calyciflorus TaxID=104777 RepID=A0A814IDH4_9BILA)

HSP 1 Score: 127 bits (319), Expect = 1.380e-34
Identity = 57/108 (52.78%), Postives = 73/108 (67.59%), Query Frame = 2 
Query:  149 AEIPTSLKGLRACKRCSLVKGNDQFVNHGCENCP-FLQMESDQARVQDCTTTYFSGLIAMMDPESSWVGKWQRISECRPGMYAIEVVGELPGEVLEFLEQKRIPFHCK 469
            A IP SLKGLRAC+ CSL+K  DQF N GC+NC  FL++  ++ R+ DCT+  F G+IAMMDP+ SWV KWQRI     GMYAI V G+LP  ++  L    IP+  +
Sbjct:    3 ASIPASLKGLRACRVCSLIKTLDQFFNEGCDNCERFLRLRGNRDRIIDCTSANFDGMIAMMDPQDSWVAKWQRIDHQVRGMYAISVSGDLPNHIIRILNDNDIPYKTR 110
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BLAST of Ec-00_006540.1 vs. uniprot
Match: B8BTE9_THAPS (Transcription initiation protein spt4-like protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BTE9_THAPS)

HSP 1 Score: 127 bits (318), Expect = 2.020e-34
Identity = 53/108 (49.07%), Postives = 70/108 (64.81%), Query Frame = 2 
Query:  149 AEIPTSLKGLRACKRCSLVKGNDQFVNHGCENCPFLQMESDQARVQDCTTTYFSGLIAMMDPESSWVGKWQRISECRPGMYAIEVVGELPGEVLEFLEQKRIPFHCKP 472
            A +PTSLKG+RAC RC ++K  DQF+ +GCENCPFL M  +  R   CTT +F G +A+MDP  SW  KW RI    PG+YAI V G+   ++ E LE +   + C+P
Sbjct:    1 ASVPTSLKGVRACMRCGIIKTLDQFLEYGCENCPFLDMAGNHERCNLCTTAFFEGQVAVMDPSESWTAKWIRIDAYLPGVYAISVTGQFDRDIEEELENRGCRWRCRP 108
The following BLAST results are available for this feature:
BLAST of Ec-00_006540.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3E5_ECTSI1.050e-99100.00Spt4 domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A835Z5B7_9STRA1.040e-4253.23Spt4/RpoE2 zinc finger-domain-containing protein n... [more]
A0A7S3LYU5_9STRA3.040e-4051.38Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S2IAX2_9STRA2.090e-3948.91Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
K3WRG9_GLOUD5.340e-3750.00Spt4 domain-containing protein n=33 Tax=Oomycota T... [more]
B7FXW7_PHATC1.250e-3643.61Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A1Z5KK11_FISSO5.170e-3646.21Transcription elongation factor SPT4 n=2 Tax=Fistu... [more]
W4GN44_9STRA3.000e-3553.85Spt4 domain-containing protein n=4 Tax=Aphanomyces... [more]
A0A814IDH4_9BILA1.380e-3452.78Transcription elongation factor SPT4 n=1 Tax=Brach... [more]
B8BTE9_THAPS2.020e-3449.07Transcription initiation protein spt4-like protein... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:10426166..10428672 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score289.7
Seed ortholog evalue7.3e-76
Seed eggNOG ortholog2880.D7G3E5
Preferred nameSUPT4H1
Length578
KEGG koko:K15171
Hectar predicted targeting categoryother localisation
Gene idEc-00_006540.1
GOsGO:0000122,GO:0000182,GO:0000228,GO:0000375,GO:0000377,GO:0000398,GO:0000785,GO:0000790,GO:0000988,GO:0000990,GO:0000991,GO:0000993,GO:0001098,GO:0001099,GO:0001181,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0003723,GO:0003727,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005700,GO:0005703,GO:0005705,GO:0006139,GO:0006282,GO:0006325,GO:0006338,GO:0006342,GO:0006351,GO:0006354,GO:0006355,GO:0006356,GO:0006357,GO:0006366,GO:0006368,GO:0006370,GO:0006396,GO:0006397,GO:0006403,GO:0006725,GO:0006807,GO:0006996,GO:0007059,GO:0008023,GO:0008150,GO:0008152,GO:0008270,GO:0008298,GO:0008380,GO:0009058,GO:0009059,GO:0009452,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0016043,GO:0016070,GO:0016071,GO:0016458,GO:0016479,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019899,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031974,GO:0031981,GO:0032044,GO:0032774,GO:0032784,GO:0032785,GO:0032786,GO:0032968,GO:0032991,GO:0033036,GO:0034243,GO:0034244,GO:0034641,GO:0034645,GO:0034654,GO:0036260,GO:0040029,GO:0043167,GO:0043169,GO:0043170,GO:0043175,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043565,GO:0044087,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044877,GO:0045814,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045943,GO:0045944,GO:0046483,GO:0046872,GO:0046914,GO:0046982,GO:0046983,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0050789,GO:0050794,GO:0051052,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051641,GO:0060255,GO:0065007,GO:0070013,GO:0070063,GO:0070727,GO:0071704,GO:0071840,GO:0080090,GO:0080134,GO:0080135,GO:0090069,GO:0090262,GO:0090304,GO:0097159,GO:0097659,GO:0098687,GO:0140110,GO:0140223,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2000232,GO:2000819,GO:2001020,GO:2001141,GO:2001207,GO:2001208,GO:2001209
EggNOG free text desc.positive regulation of DNA-templated transcription, elongation
EggNOG OGsCOG5204@1,KOG3490@2759
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03019,ko03021
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_006540Ec-00_006540Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 10426166..10428672 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_006540.1Ec-00_006540.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 10426249..10428585 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_006540.1.1Ec-00_006540.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 10426166..10426386 +
Ec-00_006540.1.2Ec-00_006540.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 10427292..10427383 +
Ec-00_006540.1.3Ec-00_006540.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 10427900..10427955 +
Ec-00_006540.1.4Ec-00_006540.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 10428464..10428672 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0065405UTR:Ec-00_006540.1Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_00 10426166..10426248 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_006540.1CDS:Ec-00_006540.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 10426249..10426386 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0065403UTR:Ec-00_006540.1Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_00 10428586..10428672 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_006540.1 ID=Ec-00_006540.1|Name=Ec-00_006540.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=136bp
MSYNNYGDGLDLEEEGLDEFAGAEIPTSLKGLRACKRCSLVKGNDQFVNH
GCENCPFLQMESDQARVQDCTTTYFSGLIAMMDPESSWVGKWQRISECRP
GMYAIEVVGELPGEVLEFLEQKRIPFHCKPPDSAK*
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spliced messenger RNA

>Ec-00_006540.1 ID=Ec-00_006540.1|Name=Ec-00_006540.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=578bp|location=Sequence derived from alignment at chr_00:10426166..10428672+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
TCCAGCTTGTGACTTGTGTACACCCTGTACGGCGTTGTTGGCGACATTCA
CAGTGACAGCAGTGGACAGGCGCACGTAGGTCCATGAGTTACAACAATTA
CGGCGATGGATTGGATCTGGAGGAGGAGGGGCTCGATGAGTTTGCCGGGG
CAGAAATCCCGACGAGCCTGAAGGGGCTTCGGGCCTGCAAGCGCTGTTCC
CTCGTAAAAGGCAACGACCAGTTCGTGAACCACGGGTGCGAGAACTGCCC
GTTCCTTCAGATGGAGAGCGACCAGGCCCGCGTTCAGGATTGCACAACCA
CATACTTTTCGGGGCTTATCGCGATGATGGACCCTGAGTCCAGCTGGGTA
GGGAAGTGGCAACGAATCAGCGAATGTCGACCTGGAATGTACGCGATCGA
GGTTGTGGGCGAGCTCCCGGGGGAGGTGCTCGAGTTCCTGGAGCAGAAGC
GCATCCCGTTCCACTGCAAGCCGCCAGACTCCGCCAAGTAGAGAGAAATA
TCGAGGGGGGGGGGGCATGGGTACTTGTTTGCATGCGTGCCCCCGTTTCG
CTGGAGCACGTGTGGTGGTTTGGGCGGG
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protein sequence of Ec-00_006540.1

>Ec-00_006540.1 ID=Ec-00_006540.1|Name=Ec-00_006540.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=136bp
MSYNNYGDGLDLEEEGLDEFAGAEIPTSLKGLRACKRCSLVKGNDQFVNH
GCENCPFLQMESDQARVQDCTTTYFSGLIAMMDPESSWVGKWQRISECRP
GMYAIEVVGELPGEVLEFLEQKRIPFHCKPPDSAK*
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mRNA from alignment at chr_00:10426166..10428672+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_006540.1 ID=Ec-00_006540.1|Name=Ec-00_006540.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=2507bp|location=Sequence derived from alignment at chr_00:10426166..10428672+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
TCCAGCTTGTGACTTGTGTACACCCTGTACGGCGTTGTTGGCGACATTCA
CAGTGACAGCAGTGGACAGGCGCACGTAGGTCCATGAGTTACAACAATTA
CGGCGATGGATTGGATCTGGAGGAGGAGGGGCTCGATGAGTTTGCCGGGG
CAGAAATCCCGACGAGCCTGAAGGGGCTTCGGGCCTGCAAGCGCTGTTCC
CTCGTAAAAGGCAACGACCAGGTGTGTCAGTGTGTGTGTGTTGGGTTGTG
TGTGTTGCGTGCCATGCATACGCTTACAGATACGAAATAATAACGATTCC
GTCCCTTCGTTGCACTTTCCTCCCTTATCGGGTGCTCTGGAAGAGAATTT
TGAGACCTGCTTGTAGGGTGTACGAACTACTTGTACAGGCCTTGTTGAGT
CTACAGAGGTACATGTCTACAGTATTACAACACGTGTTAACGTGTAGCCC
CCGGCATCGATAGGCATCGGCGCCCGATATCCGACCCCTTCGACGTCGGA
AGACGGTCTGACCATGGAGGTGTCGGACGACGCTTTCCCGCAGTTCGGGC
TGGTATGAGCACCCCCTCCTTGTAGCGGGATAGGTGCCAACCAGACAGGC
AGGCGGATCGGAGGTGGAGGGGGGGGTGGTATACCGCCCCATTCACGGTT
TCCGAAATTCGAAATTCGTAAGCGGGATGAACGTAAGCGGGATGAATTCT
AGGGTTTTTGGGTTCGTCTGCACGTTTGGAAGTGGATTTGAGTATCGAAG
AGCCACCGCCATGTGTACTCTGTTTTGACGCGAAGACTGCAGAGTCTCCG
CCCCCCTTCTTGAACCTGTGGGTACAAAGTGTTTTCATTCCTTCCTTTGG
TCGGGCATGTGGTACTCAAACCAGAGGCAGTACGACGGGGTCCGCCTACC
CTATTCTACACCACGGACGGAAGCACTTGGCGCTTCGTTGAATTTGATTC
TTGTGGCCACTCGGGATTCGTTCGAACGTGTGACCTTGGACCATCTATCC
ATCGCCTCTCCCCCCCCTGCCCCGCCGTATGTAGATGTCTTTGTCGCCGC
CGCTGCTGCTGCTGCTGCTGCTGGCGGATTGACTGTACCTCTCTTTACCC
ACCGCCCGCTCGCTTGCTTTGTGCAGTTCGTGAACCACGGGTGCGAGAAC
TGCCCGTTCCTTCAGATGGAGAGCGACCAGGCCCGCGTTCAGGATTGCAC
AACCACATACTTTTCGGGGTGAGAGTGAGAAGGAGAACGCTTCCGCGTCC
GTCGTCGTGAACACATGACGCAAACGAGTGTTTTCCGTGATTGTGTAACC
TCTGCATACATCTAAATGAGAAGGGAGCAGCTGGTTCTGTCATAAACGAT
TTTTTCTTCCTTGGTGTTGAAGATTCCGTAGTTCGGACGACGACTTGGTT
TACCTCCCGATTCAGTGGACCGTGACAAGCATATTTCGCGCTACACGCGC
TCGGTCGGATAGCTCGAGTAGCACGAGTTGTGCTGTGCACTTCAAACCAA
CCGAGAAGCTCGATGATGAAACACACGGCATAAACCGGACATGGCCCATC
GATTGTGAGCGTTGCGCCCGTTTCTGTCTGTCCGTGGCATATTACTCTCA
AATTCCAGCCCGCCGCCTTGTGGTTTTTGTACCACTCCACCTGCCACCCA
ACCCGCCAGCCCGGTCTCATGTCTTCTTCCTTGTTTCATCTTGGTCGTGT
ATCTCCACCATCACCCCGGCGATGACCGCCACAGGCTTATCGCGATGATG
GACCCTGAGTCCAGCTGGGTAGGGAAGTGGCAACGAATCAGTGAGTGGAA
TAGTGACGCCTTCGTTGCTGTTTGGTACAAAGGACATTGCCGCGCGGTAC
TGCTGCTGTTGTTGTTGTTAGTGCTCTCGTCGTTTTTTTACCCACCGTTA
GTTCGCCCAAAAGATAACCACAGCCCTTGAGCAGTTGCTGTCCGAAGCTG
TGCACACGCGGCAATGGTACAGTAGTCTTTCGTAGAACGTGGAACGTGAT
TCCTCTCCGCCAGTGCGTAAGCGGCGACGGTAAACTGACTGACCCCTGCC
GTTGGCCTCGCATCTCCGGTACGTCGTTTCGTCACACACCACACGCTTAT
CCTTCAATCAACACAACCATAGAGGGCGTGCTGTCTCTCTGTCCCCCAGA
GTGCGCAGGTTTGTTGATTTTCAGTACAATGTGCCGAAATCTTGTCATTT
TACCACCACCCCCCTCCCAAATCTCCACTCGCGCCCTCTCGCCGCAAACG
ACTAATGATGGCCGGGGGTAATTCGTTGGTTGACCGATACTGCTGTAGGC
GAATGTCGACCTGGAATGTACGCGATCGAGGTTGTGGGCGAGCTCCCGGG
GGAGGTGCTCGAGTTCCTGGAGCAGAAGCGCATCCCGTTCCACTGCAAGC
CGCCAGACTCCGCCAAGTAGAGAGAAATATCGAGGGGGGGGGGGCATGGG
TACTTGTTTGCATGCGTGCCCCCGTTTCGCTGGAGCACGTGTGGTGGTTT
GGGCGGG
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Coding sequence (CDS) from alignment at chr_00:10426166..10428672+

>Ec-00_006540.1 ID=Ec-00_006540.1|Name=Ec-00_006540.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=408bp|location=Sequence derived from alignment at chr_00:10426166..10428672+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGAGTTACAACAATTACGGCGATGGATTGGATCTGGAGGAGGAGGGGCT
CGATGAGTTTGCCGGGGCAGAAATCCCGACGAGCCTGAAGGGGCTTCGGG
CCTGCAAGCGCTGTTCCCTCGTAAAAGGCAACGACCAGTTCGTGAACCAC
GGGTGCGAGAACTGCCCGTTCCTTCAGATGGAGAGCGACCAGGCCCGCGT
TCAGGATTGCACAACCACATACTTTTCGGGGCTTATCGCGATGATGGACC
CTGAGTCCAGCTGGGTAGGGAAGTGGCAACGAATCAGCGAATGTCGACCT
GGAATGTACGCGATCGAGGTTGTGGGCGAGCTCCCGGGGGAGGTGCTCGA
GTTCCTGGAGCAGAAGCGCATCCCGTTCCACTGCAAGCCGCCAGACTCCG
CCAAGTAG
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Synonyms
The feature 'Ec-00_006540.1' has the following synonyms
Synonym
Esi0509_0003
Esi_0509_0003