Ec-00_006460.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Ec-00_006460.1
Unique Name	Ec-00_006460.1
Type	mRNA
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	476

Homology

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BLAST of Ec-00_006460.1 vs. uniprot
Match: D7G349_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G349_ECTSI)

HSP 1 Score: 951 bits (2458), Expect = 0.000e+0
Identity = 475/475 (100.00%), Postives = 475/475 (100.00%), Query Frame = 1

Query:    1 MLSCPPCPPLLMQHMPILVITDIMCRVGPIVHDRCQMAAPNEGVLPRVGEPDEHGMRKVDIPALAPLGNYFLGADQVSEPVPQEKCTQRNVYNLLRDAQTSPPVQRLDFGQLLSVSAWQDSEEGTTAVDFVLLARARLRNLRRRSHHSMDLFEVVAVLNVRLTKLVAFISEGQDKEVPPAVLVEEEQTAPGSVLPTLSAQSVFSTRVLAVATGSTTAKAPELPAFSQHLCEPVAGQNDLRPAALDHLVLAYARAKEKFIAIGLQPANQCAKKRAELAVRSGACFGSAVQRTKALQIQVAQHQPGKSADTNGIVEEYGLPFDIQPLQEDPTATVRRTHALGSNAGPYYGPDALHDCNHGDDCRQKYGGIDSCAQLSGVNLNAHEQNHAKKKKFLHMLNVMKFDRFAFMVTLINETENEAINRKSVANMVKRVRGHGSERVEICQAQVWFCGRCFCQKSLMRSFDQFGRVRLTFVKP 1425
            MLSCPPCPPLLMQHMPILVITDIMCRVGPIVHDRCQMAAPNEGVLPRVGEPDEHGMRKVDIPALAPLGNYFLGADQVSEPVPQEKCTQRNVYNLLRDAQTSPPVQRLDFGQLLSVSAWQDSEEGTTAVDFVLLARARLRNLRRRSHHSMDLFEVVAVLNVRLTKLVAFISEGQDKEVPPAVLVEEEQTAPGSVLPTLSAQSVFSTRVLAVATGSTTAKAPELPAFSQHLCEPVAGQNDLRPAALDHLVLAYARAKEKFIAIGLQPANQCAKKRAELAVRSGACFGSAVQRTKALQIQVAQHQPGKSADTNGIVEEYGLPFDIQPLQEDPTATVRRTHALGSNAGPYYGPDALHDCNHGDDCRQKYGGIDSCAQLSGVNLNAHEQNHAKKKKFLHMLNVMKFDRFAFMVTLINETENEAINRKSVANMVKRVRGHGSERVEICQAQVWFCGRCFCQKSLMRSFDQFGRVRLTFVKP
Sbjct:    1 MLSCPPCPPLLMQHMPILVITDIMCRVGPIVHDRCQMAAPNEGVLPRVGEPDEHGMRKVDIPALAPLGNYFLGADQVSEPVPQEKCTQRNVYNLLRDAQTSPPVQRLDFGQLLSVSAWQDSEEGTTAVDFVLLARARLRNLRRRSHHSMDLFEVVAVLNVRLTKLVAFISEGQDKEVPPAVLVEEEQTAPGSVLPTLSAQSVFSTRVLAVATGSTTAKAPELPAFSQHLCEPVAGQNDLRPAALDHLVLAYARAKEKFIAIGLQPANQCAKKRAELAVRSGACFGSAVQRTKALQIQVAQHQPGKSADTNGIVEEYGLPFDIQPLQEDPTATVRRTHALGSNAGPYYGPDALHDCNHGDDCRQKYGGIDSCAQLSGVNLNAHEQNHAKKKKFLHMLNVMKFDRFAFMVTLINETENEAINRKSVANMVKRVRGHGSERVEICQAQVWFCGRCFCQKSLMRSFDQFGRVRLTFVKP 475

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BLAST of Ec-00_006460.1 vs. uniprot
Match: A0A6H5JVZ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVZ9_9PHAE)

HSP 1 Score: 804 bits (2076), Expect = 4.200e-290
Identity = 400/461 (86.77%), Postives = 426/461 (92.41%), Query Frame = 1

Query:   40 HMPILVITDIMCRVGPIVHDRCQMAAPNEGVLPRVGEPDEHGMRKVDIPALAPLGNYFLGADQVSEPVPQEKCTQRNVYNLLRDAQTSPPVQRLDFGQLLSVSAWQDSEEGTTAVDFVLLARARLRNLRRRSHHSMDLFEVVAVLNVRLTKLVAFISEGQDKEVPPAVLVEEEQTAPGSVLPTLSAQSVFSTRVLAVATGSTTAKAPELPAFSQHLCEPVAGQNDLRPAALDHLVLAYARAKEKFIAIGLQPANQCAKKRAELAVRSGACFGSAVQRTKALQIQVAQHQPGKSADTNGIVEEYGLPFDIQPLQEDPTATVRRTHALGSNAGPYYGPDALHDCNHGDDCRQKYGGIDSCAQLSGVNLNAHEQNHAKKKKFLHMLNVMKFDRFAFMVTLINETENEAINRKSVANMVKRVRGHGSERVEICQAQVWFCGRCFCQKSLMRSFDQFGRVRLTFVK 1422
            HMPILVIT I+CRVGPIVH  CQ AAPN+GVLPRVGEPDEHGMR VDIPALAP+GNYFLGAD+VS+PVPQEKCT+ NVYNLLRDA+ SP VQRLDFGQLLSVS+WQ+ EEG TAV FVLLARARLRNLRR+SHHSMDLFEVVAVLNVRLTKLVA I EGQDKE+PP  LVEEEQ   GSVL TLSA+SVFS+RVLAVATGSTT KAPE PAFS+HLCEP  GQNDLRPAALD LVL YARAKE+FIA GLQPAN+ A+KRAELAVRSGACFGSAVQRTKALQIQVA HQPGKSAD NGIVEEYGL FDIQ L+EDPTATVRRTHALGSNAGPYYGPD LHDCNHGDDCRQKYGGID+CAQLSGVNLNAHEQNHAKKKKFLHMLNVMKFDRFAFMVTLINETENEAINR+SVANMVKRVRGHG E+V+ICQA+VWFCGRCFC+ SLMRSFDQFGRVRLT ++
Sbjct:  105 HMPILVITHIICRVGPIVHGLCQTAAPNKGVLPRVGEPDEHGMRTVDIPALAPMGNYFLGADKVSKPVPQEKCTRSNVYNLLRDAKPSPAVQRLDFGQLLSVSSWQEVEEGDTAVAFVLLARARLRNLRRQSHHSMDLFEVVAVLNVRLTKLVAVIREGQDKELPPTALVEEEQVVVGSVLQTLSARSVFSSRVLAVATGSTTGKAPEFPAFSRHLCEPEVGQNDLRPAALDDLVLTYARAKEEFIASGLQPANERARKRAELAVRSGACFGSAVQRTKALQIQVAHHQPGKSADINGIVEEYGLSFDIQSLEEDPTATVRRTHALGSNAGPYYGPDTLHDCNHGDDCRQKYGGIDTCAQLSGVNLNAHEQNHAKKKKFLHMLNVMKFDRFAFMVTLINETENEAINRRSVANMVKRVRGHGLEKVQICQAEVWFCGRCFCENSLMRSFDQFGRVRLTSIQ 565

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BLAST of Ec-00_006460.1 vs. uniprot
Match: A0A6H5K1E3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1E3_9PHAE)

HSP 1 Score: 681 bits (1757), Expect = 2.650e-237
Identity = 351/461 (76.14%), Postives = 376/461 (81.56%), Query Frame = 1

Query:   40 HMPILVITDIMCRVGPIVHDRCQMAAPNEGVLPRVGEPDEHGMRKVDIPALAPLGNYFLGADQVSEPVPQEKCTQRNVYNLLRDAQTSPPVQRLDFGQLLSVSAWQDSEEGTTAVDFVLLARARLRNLRRRSHHSMDLFEVVAVLNVRLTKLVAFISEGQDKEVPPAVLVEEEQTAPGSVLPTLSAQSVFSTRVLAVATGSTTAKAPELPAFSQHLCEPVAGQNDLRPAALDHLVLAYARAKEKFIAIGLQPANQCAKKRAELAVRSGACFGSAVQRTKALQIQVAQHQPGKSADTNGIVEEYGLPFDIQPLQEDPTATVRRTHALGSNAGPYYGPDALHDCNHGDDCRQKYGGIDSCAQLSGVNLNAHEQNHAKKKKFLHMLNVMKFDRFAFMVTLINETENEAINRKSVANMVKRVRGHGSERVEICQAQVWFCGRCFCQKSLMRSFDQFGRVRLTFVK 1422
            HMPILVITDIM RVGPIVH  CQ AAPN+GVLPRVGEPDEHGMR VDIPALAP+GNYF GAD++S+PVPQEKCT+ NVYNLLRDA+ SP VQRL+FGQLLS S+WQ+ EEG TAV FVLLARARLRNLRR+SHHSMDLFEVVAVLNVRLTKLVA I EGQDKE+PP  LVEEEQ   GSVL TLSAQSVFSTRVLA ATGSTT KAP  PAFS+HLCEP  GQNDLRPAALD LVL YARAKE+FIA G QPAN+  +KRA      GA                                          L+EDPTATVRRTHALGSNAGPYYGPD LHDCNHGDD RQKYGGID+CAQLSGVNLNAHEQNHAKKKKFLHMLNVMKFDRFAFMVTLINETENEAINR+SVANMVKRVRGHG E+V+ICQA+VWFCGRCFC+ SLMRSFDQFGRVRLTF++
Sbjct:  442 HMPILVITDIMGRVGPIVHGLCQTAAPNKGVLPRVGEPDEHGMRTVDIPALAPVGNYFFGADKISKPVPQEKCTRSNVYNLLRDAKPSPAVQRLNFGQLLSASSWQEVEEGDTAVAFVLLARARLRNLRRQSHHSMDLFEVVAVLNVRLTKLVAVIREGQDKELPPTALVEEEQVVVGSVLQTLSAQSVFSTRVLAAATGSTTGKAPRFPAFSRHLCEPEVGQNDLRPAALDDLVLTYARAKEEFIASGRQPANERVRKRA------GA------------------------------------------LEEDPTATVRRTHALGSNAGPYYGPDTLHDCNHGDDFRQKYGGIDTCAQLSGVNLNAHEQNHAKKKKFLHMLNVMKFDRFAFMVTLINETENEAINRRSVANMVKRVRGHGLEKVQICQAEVWFCGRCFCENSLMRSFDQFGRVRLTFIQ 854

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BLAST of Ec-00_006460.1 vs. uniprot
Match: A0A6H5KWH1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWH1_9PHAE)

HSP 1 Score: 525 bits (1353), Expect = 1.150e-183
Identity = 276/346 (79.77%), Postives = 293/346 (84.68%), Query Frame = 1

Query:  166 MRKVDIPALAPLGNYFLGADQVSEPVPQEKCTQRNVYNLLRDAQTSPPVQRLDFGQLLSVSAWQDSEEGTTAVDFVLLARARLRNLRRRSHHSMDLFEVVAVLNVRLTKLVAFISEGQDKEVPPAVLVEEEQTAPGSVLPTLSAQSVFSTRVLAVATGSTTAKAPELPAFSQHLCEPVAGQNDLRPAALDHLVLAYARAKEKFIAIGLQPANQCAKKRA-ELAVRSGACFGSAVQRTKALQIQVAQHQPGKSADTNGIVEEYGLPFDIQPLQEDPTATVRRTHALGSNAGPYYGPDALHDCNHGDDCRQKYGGIDSCAQLSGVNLNAHEQNHAKKKKFLHMLNVMK 1200
            MR V IPALAPLGNYFLGAD VS+PVPQE+CT+ NVYNLLRDA+ SP VQRLDFGQLLSVS+ Q+ EEG TAV FVLLARARLRNL R+SHHSMDLFEVVA LNVRLTKLV FI +GQDKE+PP  LVEEEQ   GSVL T SAQSVFSTRVLAVATGSTT KAPELPAFS+HLC+P  GQNDLR AALD LVL YAR     +        Q A+K A   AVRS +CFGSA+QRTKALQIQVA HQPGKSAD NGIVEEYGL F IQPL+EDPT TVRRTHALGSNAGPYYGPD LHDCNHGDDCRQKYGGID+CAQLSG NLNAHEQNHAKKKKFLHMLNVMK
Sbjct:    1 MRTVHIPALAPLGNYFLGADNVSKPVPQERCTRSNVYNLLRDAKPSPAVQRLDFGQLLSVSSLQELEEGDTAVAFVLLARARLRNLCRQSHHSMDLFEVVAALNVRLTKLVTFIRKGQDKELPPTALVEEEQVGVGSVLQTSSAQSVFSTRVLAVATGSTTGKAPELPAFSRHLCKPEVGQNDLRSAALDDLVLIYARVS---VHREWTSTRQRARKEAGRTAVRSRSCFGSALQRTKALQIQVAHHQPGKSADINGIVEEYGLSFGIQPLEEDPTTTVRRTHALGSNAGPYYGPDTLHDCNHGDDCRQKYGGIDTCAQLSGFNLNAHEQNHAKKKKFLHMLNVMK 343

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BLAST of Ec-00_006460.1 vs. uniprot
Match: A0A6H5KKU6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKU6_9PHAE)

HSP 1 Score: 542 bits (1396), Expect = 3.160e-182
Identity = 295/463 (63.71%), Postives = 341/463 (73.65%), Query Frame = 1

Query:   40 HMPILVITDIMCRVGPIVHDRCQMAAPNEGVLPRVGEPDEHGMRKVDIPALAPL-GNYFLGADQVSEPV-PQEKCTQRNVYNLLRDAQTSPPVQRLDFGQLLSVSAWQDSEEGTTAVDFVLLARARLRNLRRRSHHSMDLFEVVAVLNVRLTKLVAFISEGQDKEVPPAVLVEEE-QTAPGSVLPTLSAQSVFSTRVLAVATGSTTAKAPELPAFSQHLCEPVAGQNDLRPAALDHLVLAYARAKEKFIAIGLQPANQCAKKRAELAVRSGACFGSAVQRTKALQIQVAQHQPGKSADTNGIVEEYGLPFDIQPLQEDPTATVRRTHALGSNAGPYYGPDALHDCNHGDDCRQKYGGIDSCAQLSGVNLNAHEQNHAKKKKFLHMLNVMKFDRFAFMVTLINETENEAINRKSVANMVKRVRGHGSERVEICQAQVWFCGRCFCQKSLMRSFDQFGRVRLTFV 1419
            HMPILVI+DIMCRVGPIVH RC  AAP+ GVLPR+GEPD+ GMR+VDIPALA L G+ F GA++ + PV  QE C Q+NVYNLLRDA  SP  Q+LDF QLL VSA  D+     A +F+LLAR   R L R SH+S+DLFE+VAVLN R T++ A I E  D   P A  VE+  +    SV  TLS QSVFSTRVLAVATGS T + P LP FS  + E + G  D+   AL++L   YA+AKE F+A GL PAN  AKKRA LAVRSGACFG+A  R KALQIQ+    P KS D  G V E+GL F++ P  E+P AT RR H LGS+AGPYY PD L+DCNHG +CRQ +G IDSC QLSGV L  HE NHAKKKKFLHMLNVMKFDRFAFMV LINETEN  INRK+V N VKRV GH SER+++C A+VWFCGRCFC+K LMRSFDQFGRV LTF+
Sbjct:  443 HMPILVISDIMCRVGPIVHQRCPTAAPDNGVLPRIGEPDDKGMRRVDIPALASLPGSNFSGAEEDTPPVVEQESCPQKNVYNLLRDAAPSPRQQQLDFSQLLEVSAVNDAGS-FAAAEFMLLARGCWRQLHRHSHYSLDLFEIVAVLNARTTQVAACIGEVGDP-APVAAFVEDGGEVDMDSVRKTLSEQSVFSTRVLAVATGSITGEVPVLPPFSDPVFELLVGDKDVGRDALENLCFDYAQAKENFVADGLLPANDDAKKRAVLAVRSGACFGAANARAKALQIQLGLMNPEKSTD--GKVAEFGLSFNVTPPVEEPGATKRRRHPLGSDAGPYYAPDTLNDCNHGIECRQAFGWIDSCRQLSGVCLTVHEHNHAKKKKFLHMLNVMKFDRFAFMVGLINETENGVINRKTVGNEVKRVLGHSSERLKVCMAEVWFCGRCFCEKPLMRSFDQFGRVFLTFL 901

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BLAST of Ec-00_006460.1 vs. uniprot
Match: A0A6H5KWV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWV2_9PHAE)

HSP 1 Score: 491 bits (1265), Expect = 1.250e-166
Identity = 264/341 (77.42%), Postives = 281/341 (82.40%), Query Frame = 1

Query:  364 EEGTTAVDFVLLARARLRNLRRRSHHSMDLFEVVAVLNVRLTKLVAFISEGQDKEVPPAVLVEEEQTAPGSVLPTLSAQSVFSTRVLAVATGSTTAKAPELPAFSQHLCEPVAGQNDLRPAALDHLVLAYARAKEKFIAIGLQPANQCAKKRAELAVRSGACFGSAVQRTKALQIQVAQHQPGKSADTNGIVEEYGLPFDIQPLQEDPTATVRRTHALGSNAGPYYGPDALHDCNHGDDCRQKYGGIDSCAQLSGVNLNAHEQNHAKKKKFLHMLNVMKFDRFAFMVTLINETENEAINRKSVANMVKRVRGHGSERVEICQAQVWFCGRCFCQKSLMRSF 1386
            EEG TAV FVLLARARLRNLRR+SHHSMDLFEV+AV+NVRLTKLVAFISEGQDKEVPP VLVE+EQ APGSVLPTL AQSVFSTRVLAVATGSTT KAPE                                A+E+F   GLQPAN+C +KRAELA RS ACFGSAV+RTKALQIQVAQHQPGK+ADTN IV+EY LPF  QPLQEDPTATVRRTHALGSN GPY G D  HD NHGDDCR+KY  IDSCAQLSGVNLNAH+QNHAKKKKF+HMLN MKFDRFAFMVTLINETENEAI+RKSVANMVK VRGHGSE+V+I QAQVWF GRCFCQKSLMRSF
Sbjct:  272 EEGYTAVAFVLLARARLRNLRRQSHHSMDLFEVMAVMNVRLTKLVAFISEGQDKEVPPTVLVEKEQVAPGSVLPTLLAQSVFSTRVLAVATGSTTGKAPE--------------------------------AEEEFTN-GLQPANECTRKRAELAERSRACFGSAVRRTKALQIQVAQHQPGKTADTNDIVDEYRLPFGTQPLQEDPTATVRRTHALGSNPGPYSGLDTPHDSNHGDDCRRKYVRIDSCAQLSGVNLNAHKQNHAKKKKFVHMLNDMKFDRFAFMVTLINETENEAIHRKSVANMVKLVRGHGSEQVKIFQAQVWFYGRCFCQKSLMRSF 579

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BLAST of Ec-00_006460.1 vs. uniprot
Match: A0A6H5KAC5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAC5_9PHAE)

HSP 1 Score: 417 bits (1073), Expect = 1.050e-142
Identity = 217/242 (89.67%), Postives = 225/242 (92.98%), Query Frame = 1

Query:   34 MQHMPILVITDIMCRVGPIVHDRCQMAAPNEGVLPRVGEPDEHGMRKVDIPALAPLGNYFLGADQVSEPVPQEKCTQRNVYNLLRDAQTSPPVQRLDFGQLLSVSAWQDSEEGTTAVDFVLLARARLRNLRRRSHHSMDLFEVVAVLNVRLTKLVAFISEGQDKEVPPAVLVEEEQTAPGSVLPTLSAQSVFSTRVLAVATGSTTAKAPELPAFSQHLCEPVAGQNDLRPAALDHLVLAYAR 759
            MQHMPILVITDIMCRVGPIVH  CQ AAPN+GVLPRVGEPDEHGMRKVDIPALAPLGNYFLGADQVSEP  QEKCTQ NVYNLLRDAQ SPPVQRLDFGQLLSVSAWQD +EG TAV FVLLARARLRNLRR+SHHS+DLFEVVAV NVRLTKLVAFISEGQD++VPPAVLVEEEQ APGSVL TLSAQSVFSTRVLAVATGSTT KAPELPAFSQHLCEPVAGQND+RP ALD LVL YA+
Sbjct:    1 MQHMPILVITDIMCRVGPIVHGICQTAAPNKGVLPRVGEPDEHGMRKVDIPALAPLGNYFLGADQVSEPAQQEKCTQSNVYNLLRDAQPSPPVQRLDFGQLLSVSAWQD-KEGNTAVAFVLLARARLRNLRRQSHHSIDLFEVVAVPNVRLTKLVAFISEGQDEDVPPAVLVEEEQVAPGSVLLTLSAQSVFSTRVLAVATGSTTGKAPELPAFSQHLCEPVAGQNDVRPDALDDLVLTYAQ 241

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BLAST of Ec-00_006460.1 vs. uniprot
Match: A0A6H5JTF9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTF9_9PHAE)

HSP 1 Score: 416 bits (1069), Expect = 2.140e-142
Identity = 198/221 (89.59%), Postives = 211/221 (95.48%), Query Frame = 1

Query:  760 AKEKFIAIGLQPANQCAKKRAELAVRSGACFGSAVQRTKALQIQVAQHQPGKSADTNGIVEEYGLPFDIQPLQEDPTATVRRTHALGSNAGPYYGPDALHDCNHGDDCRQKYGGIDSCAQLSGVNLNAHEQNHAKKKKFLHMLNVMKFDRFAFMVTLINETENEAINRKSVANMVKRVRGHGSERVEICQAQVWFCGRCFCQKSLMRSFDQFGRVRLTFVK 1422
            AKE+FIA GLQPAN+ A+KRAELAVRSGACFGSAVQRTKALQIQVA HQPGKSAD NGIVEEYGL FDIQPL+EDPTATVRRTHALGSNAGPYYGPD LHDCNHGDDCRQKYGGID+CAQLSGVNLNAHEQNHAKKKKFLHMLNVMKFDRF FMVTLINETENEA+ R+SVANMVKRVRGHG E+V+ICQA+VWFCGRCFC+ SLMRSFDQFGRVRLTF++
Sbjct:    5 AKEEFIASGLQPANERARKRAELAVRSGACFGSAVQRTKALQIQVAHHQPGKSADINGIVEEYGLSFDIQPLEEDPTATVRRTHALGSNAGPYYGPDTLHDCNHGDDCRQKYGGIDTCAQLSGVNLNAHEQNHAKKKKFLHMLNVMKFDRFTFMVTLINETENEAMKRRSVANMVKRVRGHGLEKVQICQAEVWFCGRCFCENSLMRSFDQFGRVRLTFIQ 225

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BLAST of Ec-00_006460.1 vs. uniprot
Match: A0A6H5JU18_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU18_9PHAE)

HSP 1 Score: 347 bits (890), Expect = 9.880e-114
Identity = 168/190 (88.42%), Postives = 176/190 (92.63%), Query Frame = 1

Query:  850 FGSAVQRTKALQIQVAQHQPGKSADTNGIVEEYGLPFDIQPLQEDPTATVRRTHALGSNAGPYYGPDALHDCNHGDDCRQKYGGIDSCAQLSGVNLNAHEQNHAKKKKFLHMLNVMKFDRFAFMVTLINETENEAINRKSVANMVKRVRGHGSERVEICQAQVWFCGRCFCQKSLMRSFDQFGRVRLTFV 1419
            FG AVQRTKALQIQVAQ QP K+AD NGIVEEYGLPFDIQPLQEDPTA VRRTHAL SNAGPYYGPD LHDCNHGDD RQKYGGIDSCAQLSGVNLNA+EQNHAKKKKFL  LNVMKFDRFAFMVTLINET+NEAINR+SVAN VKRVRGHGSERVEICQA+VWF GRCFCQ+SL+RSFDQF RVR TF+
Sbjct:   47 FGWAVQRTKALQIQVAQRQPRKNADINGIVEEYGLPFDIQPLQEDPTAIVRRTHALRSNAGPYYGPDTLHDCNHGDDSRQKYGGIDSCAQLSGVNLNAYEQNHAKKKKFLRTLNVMKFDRFAFMVTLINETKNEAINRESVANTVKRVRGHGSERVEICQAEVWFWGRCFCQESLVRSFDQFSRVRPTFL 236

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BLAST of Ec-00_006460.1 vs. uniprot
Match: A0A6H5KMZ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMZ3_9PHAE)

HSP 1 Score: 345 bits (884), Expect = 1.490e-113
Identity = 177/208 (85.10%), Postives = 188/208 (90.38%), Query Frame = 1

Query:   40 HMPILVITDIMCRVGPIVHDRCQMAAPNEGVLPRVGEPDEHGMRKVDIPALAPLGNYFLGADQVSEPVPQEKCTQRNVYNLLRDAQTSPPVQRLDFGQLLSVSAWQDSEEGTTAVDFVLLARARLRNLRRRSHHSMDLFEVVAVLNVRLTKLVAFISEGQDKEVPPAVLVEEEQTAPGSVLPTLSAQSVFSTRVLAVATGSTTAKAPE 663
            HMPILVIT I+CRVGPIVH  CQ AAPN+GVLPRVGEPDEHGMR VDIPALAP+GNYFLGAD+VS+PVPQEKCT+ NVYNLLRDA+ SP VQRLDFGQLLSVS+WQ+ EEG TAV FVLLARARLRNLRR+SHHSMDLFEVVAVLNVRLTKLVA I EGQDKE+PP  LVEEEQ   GSVL TLSAQSVFSTRVLAVATGSTT KAPE
Sbjct:   46 HMPILVITHIICRVGPIVHGLCQTAAPNKGVLPRVGEPDEHGMRTVDIPALAPMGNYFLGADKVSKPVPQEKCTRSNVYNLLRDAKPSPAVQRLDFGQLLSVSSWQEVEEGDTAVAFVLLARARLRNLRRQSHHSMDLFEVVAVLNVRLTKLVAVIREGQDKELPPTALVEEEQVVMGSVLQTLSAQSVFSTRVLAVATGSTTGKAPE 253

The following BLAST results are available for this feature:

BLAST of Ec-00_006460.1 vs. uniprot

BLAST of Ec-00_006460.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G349_ECTSI	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JVZ9_9PHAE	4.200e-290	86.77	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K1E3_9PHAE	2.650e-237	76.14	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KWH1_9PHAE	1.150e-183	79.77	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KKU6_9PHAE	3.160e-182	63.71	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KWV2_9PHAE	1.250e-166	77.42	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KAC5_9PHAE	1.050e-142	89.67	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JTF9_9PHAE	2.140e-142	89.59	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JU18_9PHAE	9.880e-114	88.42	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KMZ3_9PHAE	1.490e-113	85.10	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_00	contig	chr_00:10244455..10246810 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Properties


Property Name	Value
Length	1428
Hectar predicted targeting category	other localisation
Gene id	Ec-00_006460.1

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-00_006460	Ec-00_006460	Ectocarpus species7 Ec32 male_plus_femaleSDR	gene	chr_00 10244347..10247402 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_006460.1.1	Ec-00_006460.1.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 10244455..10245213 +
Ec-00_006460.1.2	Ec-00_006460.1.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 10245881..10245944 +
Ec-00_006460.1.3	Ec-00_006460.1.3	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 10246206..10246810 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_006460.1	CDS:Ec-00_006460.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	CDS	chr_00 10244455..10245213 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_006460.1	Ec-00_006460.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	polypeptide	chr_00 10244455..10246810 +

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at chr_00:10244455..10246810+
coding sequence from alignment at chr_00:10244455..10246810+

mRNA sequence

>Ec-00_006460.1 ID=Ec-00_006460.1|Name=Ec-00_006460.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=476bp
MLSCPPCPPLLMQHMPILVITDIMCRVGPIVHDRCQMAAPNEGVLPRVGE
PDEHGMRKVDIPALAPLGNYFLGADQVSEPVPQEKCTQRNVYNLLRDAQT
SPPVQRLDFGQLLSVSAWQDSEEGTTAVDFVLLARARLRNLRRRSHHSMD
LFEVVAVLNVRLTKLVAFISEGQDKEVPPAVLVEEEQTAPGSVLPTLSAQ
SVFSTRVLAVATGSTTAKAPELPAFSQHLCEPVAGQNDLRPAALDHLVLA
YARAKEKFIAIGLQPANQCAKKRAELAVRSGACFGSAVQRTKALQIQVAQ
HQPGKSADTNGIVEEYGLPFDIQPLQEDPTATVRRTHALGSNAGPYYGPD
ALHDCNHGDDCRQKYGGIDSCAQLSGVNLNAHEQNHAKKKKFLHMLNVMK
FDRFAFMVTLINETENEAINRKSVANMVKRVRGHGSERVEICQAQVWFCG
RCFCQKSLMRSFDQFGRVRLTFVKP*

spliced messenger RNA

>Ec-00_006460.1 ID=Ec-00_006460.1|Name=Ec-00_006460.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1428bp|location=Sequence derived from alignment at chr_00:10244455..10246810+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGCTTTCATGTCCCCCGTGTCCCCCATTGTTAATGCAGCACATGCCTAT
CCTCGTCATCACGGACATCATGTGTCGTGTAGGTCCGATCGTCCACGACC
GCTGCCAGATGGCGGCACCGAACGAAGGAGTTCTTCCCCGGGTTGGCGAG
CCTGACGAGCATGGCATGCGGAAGGTGGACATCCCAGCACTAGCGCCTCT
GGGAAATTACTTTCTTGGCGCCGATCAGGTTTCGGAGCCCGTACCGCAGG
AGAAATGCACTCAACGCAATGTGTACAATCTCCTGCGCGATGCGCAAACT
TCTCCTCCGGTTCAACGGTTGGACTTCGGTCAGCTTCTCAGCGTTTCAGC
ATGGCAGGATAGCGAAGAAGGGACCACCGCCGTGGACTTCGTGCTGCTTG
CTCGGGCCCGTTTGCGGAACCTGCGCCGCCGAAGCCACCACTCCATGGAC
CTCTTTGAGGTAGTGGCTGTTCTGAACGTGCGCCTCACCAAGCTCGTGGC
TTTCATCAGCGAAGGACAAGACAAGGAGGTCCCGCCAGCAGTACTTGTCG
AGGAAGAGCAGACGGCCCCGGGCTCGGTGCTGCCGACGTTATCGGCGCAG
AGCGTGTTCTCCACACGCGTTCTCGCGGTGGCGACTGGGTCCACCACCGC
CAAGGCTCCGGAACTCCCTGCCTTCTCTCAGCATCTTTGCGAACCTGTGG
CTGGCCAGAATGATCTTCGACCTGCGGCGCTCGATCACCTGGTTTTGGCC
TACGCCCGGGCCAAGGAGAAGTTCATCGCGATTGGACTTCAACCCGCCAA
CCAGTGCGCAAAGAAGAGGGCAGAACTGGCTGTGCGCTCAGGAGCATGCT
TCGGGTCGGCGGTGCAGCGTACGAAAGCCCTTCAGATTCAGGTGGCTCAA
CATCAACCGGGGAAAAGCGCTGACACCAATGGCATCGTGGAAGAGTATGG
CCTTCCGTTCGACATCCAACCGCTGCAGGAGGACCCCACGGCGACAGTGC
GCAGAACGCACGCCTTGGGGAGCAATGCCGGGCCTTACTACGGGCCTGAC
GCCCTGCACGACTGCAACCACGGGGATGACTGCCGCCAAAAGTACGGTGG
GATAGACTCATGCGCCCAGCTCTCGGGGGTCAACCTCAACGCGCACGAGC
AGAACCATGCGAAGAAGAAAAAGTTTCTGCACATGTTGAATGTCATGAAA
TTTGACCGCTTTGCGTTCATGGTAACTCTGATCAACGAGACCGAGAATGA
GGCAATAAACCGCAAATCGGTGGCAAACATGGTCAAGCGTGTTCGAGGCC
ATGGCTCGGAACGAGTAGAGATTTGCCAGGCTCAGGTTTGGTTCTGCGGC
AGATGCTTCTGCCAGAAGTCTCTAATGCGATCATTCGACCAGTTCGGCCG
GGTCCGGCTGACCTTTGTTAAGCCATAG

protein sequence of Ec-00_006460.1

>Ec-00_006460.1 ID=Ec-00_006460.1|Name=Ec-00_006460.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=476bp
MLSCPPCPPLLMQHMPILVITDIMCRVGPIVHDRCQMAAPNEGVLPRVGE
PDEHGMRKVDIPALAPLGNYFLGADQVSEPVPQEKCTQRNVYNLLRDAQT
SPPVQRLDFGQLLSVSAWQDSEEGTTAVDFVLLARARLRNLRRRSHHSMD
LFEVVAVLNVRLTKLVAFISEGQDKEVPPAVLVEEEQTAPGSVLPTLSAQ
SVFSTRVLAVATGSTTAKAPELPAFSQHLCEPVAGQNDLRPAALDHLVLA
YARAKEKFIAIGLQPANQCAKKRAELAVRSGACFGSAVQRTKALQIQVAQ
HQPGKSADTNGIVEEYGLPFDIQPLQEDPTATVRRTHALGSNAGPYYGPD
ALHDCNHGDDCRQKYGGIDSCAQLSGVNLNAHEQNHAKKKKFLHMLNVMK
FDRFAFMVTLINETENEAINRKSVANMVKRVRGHGSERVEICQAQVWFCG
RCFCQKSLMRSFDQFGRVRLTFVKP*

mRNA from alignment at chr_00:10244455..10246810+

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>Ec-00_006460.1 ID=Ec-00_006460.1|Name=Ec-00_006460.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=2356bp|location=Sequence derived from alignment at chr_00:10244455..10246810+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGCTTTCATGTCCCCCGTGTCCCCCATTGTTAATGCAGCACATGCCTAT
CCTCGTCATCACGGACATCATGTGTCGTGTAGGTCCGATCGTCCACGACC
GCTGCCAGATGGCGGCACCGAACGAAGGAGTTCTTCCCCGGGTTGGCGAG
CCTGACGAGCATGGCATGCGGAAGGTGGACATCCCAGCACTAGCGCCTCT
GGGAAATTACTTTCTTGGCGCCGATCAGGTTTCGGAGCCCGTACCGCAGG
AGAAATGCACTCAACGCAATGTGTACAATCTCCTGCGCGATGCGCAAACT
TCTCCTCCGGTTCAACGGTTGGACTTCGGTCAGCTTCTCAGCGTTTCAGC
ATGGCAGGATAGCGAAGAAGGGACCACCGCCGTGGACTTCGTGCTGCTTG
CTCGGGCCCGTTTGCGGAACCTGCGCCGCCGAAGCCACCACTCCATGGAC
CTCTTTGAGGTAGTGGCTGTTCTGAACGTGCGCCTCACCAAGCTCGTGGC
TTTCATCAGCGAAGGACAAGACAAGGAGGTCCCGCCAGCAGTACTTGTCG
AGGAAGAGCAGACGGCCCCGGGCTCGGTGCTGCCGACGTTATCGGCGCAG
AGCGTGTTCTCCACACGCGTTCTCGCGGTGGCGACTGGGTCCACCACCGC
CAAGGCTCCGGAACTCCCTGCCTTCTCTCAGCATCTTTGCGAACCTGTGG
CTGGCCAGAATGATCTTCGACCTGCGGCGCTCGATCACCTGGTTTTGGCC
TACGCCCGGGTGAGTACGCCTTCTTTGCGTAGCTGACGTAGTGGGCTGTT
GTGCTTTGTCTTTGGCGGTATTATCAATACTGGTGGTTGTTCGTTGCTCC
GTTGGTCAAGTGGGTTTTTTTTCGCGTTCCTCATTGAACATCGTTGTCCC
TCCTTTTTTTTCTTCCACCTTACGTTCCTTCCGTTTTCCTTCTCGGCGTC
GCCGGTTGATTTGATTTCTGCGCGCGGCAAAAGCTACCTTGTTTCATGTT
TTGTTATTCAATTCGGAGCAGTGAACATAGGTAGATCACTGCTGACACAT
TGACATATTACTCATGTGTTGCTGCAATTTGAAAAACAATGCTAGAGACG
CTAGAGCGGGGAACAAGAACATCTTTTCTCGCATGCTGGTAAGGACATGC
GCATGCTCTGTGCCCACCGCTAAAACTACCACACCTCTCCCATTCAGCGC
ATGCACTTCGTTGCATATTAAAAGGCTGTAGTGCTCGAAGCTCTTGAGTT
GCTGACATGTCAACAAGACTACCCAGCAATGTTTTTTTTTTCTGATGCTT
GTACAGAGTTTCCTGTATAAATGCATTAAAGCAGCCCATTGCGGTAACCC
AACTATTTAGACAACTTTTTCGACCACACGGTTTACTTTCCGTCCCCTTC
TTCGGGACCTCTGACATCTGGATCAGGCCAAGGAGAAGTTCATCGCGATT
GGACTTCAACCCGCCAACCAGTGCGCAAAGAAGAGGGCAGGTACGAGGAC
GTGGACACTTGCGTGTTAGGTGTTGAGGCTAGTTGTTTTGTTGGTCCAAT
AATCTAAGGACTACCAATCTACCGGGCTGTGTACGTTTTTCCATAATGTG
TCAATGTTGGTGCCGGTATCAGGCCGGTATGGTACATGTCGTTCGTTACC
TCCAGGCCGGCTCAAAATGATCAAACCTTAGTCAAAACGTTTTCATGAGC
CAACACATGGCATGCCGTTTTGTTGTACGTCATCTCTGTTCGTCCTCACA
GAACTGGCTGTGCGCTCAGGAGCATGCTTCGGGTCGGCGGTGCAGCGTAC
GAAAGCCCTTCAGATTCAGGTGGCTCAACATCAACCGGGGAAAAGCGCTG
ACACCAATGGCATCGTGGAAGAGTATGGCCTTCCGTTCGACATCCAACCG
CTGCAGGAGGACCCCACGGCGACAGTGCGCAGAACGCACGCCTTGGGGAG
CAATGCCGGGCCTTACTACGGGCCTGACGCCCTGCACGACTGCAACCACG
GGGATGACTGCCGCCAAAAGTACGGTGGGATAGACTCATGCGCCCAGCTC
TCGGGGGTCAACCTCAACGCGCACGAGCAGAACCATGCGAAGAAGAAAAA
GTTTCTGCACATGTTGAATGTCATGAAATTTGACCGCTTTGCGTTCATGG
TAACTCTGATCAACGAGACCGAGAATGAGGCAATAAACCGCAAATCGGTG
GCAAACATGGTCAAGCGTGTTCGAGGCCATGGCTCGGAACGAGTAGAGAT
TTGCCAGGCTCAGGTTTGGTTCTGCGGCAGATGCTTCTGCCAGAAGTCTC
TAATGCGATCATTCGACCAGTTCGGCCGGGTCCGGCTGACCTTTGTTAAG
CCATAG

Coding sequence (CDS) from alignment at chr_00:10244455..10246810+

>Ec-00_006460.1 ID=Ec-00_006460.1|Name=Ec-00_006460.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1428bp|location=Sequence derived from alignment at chr_00:10244455..10246810+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGCTTTCATGTCCCCCGTGTCCCCCATTGTTAATGCAGCACATGCCTAT
CCTCGTCATCACGGACATCATGTGTCGTGTAGGTCCGATCGTCCACGACC
GCTGCCAGATGGCGGCACCGAACGAAGGAGTTCTTCCCCGGGTTGGCGAG
CCTGACGAGCATGGCATGCGGAAGGTGGACATCCCAGCACTAGCGCCTCT
GGGAAATTACTTTCTTGGCGCCGATCAGGTTTCGGAGCCCGTACCGCAGG
AGAAATGCACTCAACGCAATGTGTACAATCTCCTGCGCGATGCGCAAACT
TCTCCTCCGGTTCAACGGTTGGACTTCGGTCAGCTTCTCAGCGTTTCAGC
ATGGCAGGATAGCGAAGAAGGGACCACCGCCGTGGACTTCGTGCTGCTTG
CTCGGGCCCGTTTGCGGAACCTGCGCCGCCGAAGCCACCACTCCATGGAC
CTCTTTGAGGTAGTGGCTGTTCTGAACGTGCGCCTCACCAAGCTCGTGGC
TTTCATCAGCGAAGGACAAGACAAGGAGGTCCCGCCAGCAGTACTTGTCG
AGGAAGAGCAGACGGCCCCGGGCTCGGTGCTGCCGACGTTATCGGCGCAG
AGCGTGTTCTCCACACGCGTTCTCGCGGTGGCGACTGGGTCCACCACCGC
CAAGGCTCCGGAACTCCCTGCCTTCTCTCAGCATCTTTGCGAACCTGTGG
CTGGCCAGAATGATCTTCGACCTGCGGCGCTCGATCACCTGGTTTTGGCC
TACGCCCGGGCCAAGGAGAAGTTCATCGCGATTGGACTTCAACCCGCCAA
CCAGTGCGCAAAGAAGAGGGCAGAACTGGCTGTGCGCTCAGGAGCATGCT
TCGGGTCGGCGGTGCAGCGTACGAAAGCCCTTCAGATTCAGGTGGCTCAA
CATCAACCGGGGAAAAGCGCTGACACCAATGGCATCGTGGAAGAGTATGG
CCTTCCGTTCGACATCCAACCGCTGCAGGAGGACCCCACGGCGACAGTGC
GCAGAACGCACGCCTTGGGGAGCAATGCCGGGCCTTACTACGGGCCTGAC
GCCCTGCACGACTGCAACCACGGGGATGACTGCCGCCAAAAGTACGGTGG
GATAGACTCATGCGCCCAGCTCTCGGGGGTCAACCTCAACGCGCACGAGC
AGAACCATGCGAAGAAGAAAAAGTTTCTGCACATGTTGAATGTCATGAAA
TTTGACCGCTTTGCGTTCATGGTAACTCTGATCAACGAGACCGAGAATGA
GGCAATAAACCGCAAATCGGTGGCAAACATGGTCAAGCGTGTTCGAGGCC
ATGGCTCGGAACGAGTAGAGATTTGCCAGGCTCAGGTTTGGTTCTGCGGC
AGATGCTTCTGCCAGAAGTCTCTAATGCGATCATTCGACCAGTTCGGCCG
GGTCCGGCTGACCTTTGTTAAGCCATAG

Synonyms

The feature 'Ec-00_006460.1' has the following synonyms


Synonym
Esi0498_0010
Esi_0498_0010