Ec-00_006420.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_006420.1
Unique NameEc-00_006420.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length931
Homology
[Close]
BLAST of Ec-00_006420.1 vs. uniprot
Match: A0A6H5K0E1_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E1_9PHAE)

HSP 1 Score: 1502 bits (3889), Expect = 0.000e+0
Identity = 880/932 (94.42%), Postives = 890/932 (95.49%), Query Frame = 1 
Query:    1 MDAGAATETARGSSPTRSAQEVLRRMSLNSPPSRTDNPRQVKRAKVLGGEGGGAAASRPFAVPQAVQTPATVRKPPPPSSRAAGLDGPSPMPSWGVNLRDASAGEPLEAGDHDPSSYYPSFQLDCLRQPYGSGTSDGAVESPAMASPAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPARLEMVGGGGKSTRGLGGIAAALEQARNVGGAGAGAGVPETPLRRPGSGAGSRASERGAAARGGGDSSCSPVGGYAGFDRSAVQGSPVKRRSVGRWRMSEEGRRETSAEQGRAACEESPLRSNRNPFSPDRDEDVAQGDAMSMPAPAPRSRLSCGGPVTGGADGSPMDTGDVGDFATMTAGMGRGGGKADEG--SFLRRVSVGSTCSSSSVPTTAGKKTVQDVTNPSPCDVAAFVPVTPCRGKNSAEAMRLGGDTAPMSPVSSAGGGVNVSLNVGNGEKVARGRFATDFEVKEIIGTGGFGTVYKVRSRVDGCLYAVKCSRRRFKGETDRQNMLMEVYALAAVCDSAQETINIVRYHQAWIEEERLYIQTELCETSLEKQLESGHRLEISGVYAFLRQTLLGLEILHQHKLVHLDIKPGNIFVKNGQYKLGDFGLVTPVHVRSGTDVVEGDSRYMSKELLNDDHSNLTKCDVFSLGITLYEIISGRPLPPNGEEWHRLRSGKAGMPMGLPAELSKTLLEMMDPDPARRPSAAELLRYPCLQSEMERQLNDQKSELSKERTRNSGLLEEVSALIQKQSHRSGRLSRTITWDNSYFAANGSKGKSPSDNLSSKPSLGGTPDAAARGGGGAARSNLSAFNASEPSGVFGGGESAPALFGPWVPRPSMAVGSARGAAAGAAEVGRGVVALSRVEEEGSDSPPASGDMAGGASLPASFERLRQA 2790
            MDAGAATETARGSSPTRSAQEVLRRMSLNSPPSRTDNPRQVKRAKVLGGEG GAAASRPFAVPQAVQTPATVRKPPPPSSRAAGLDGPSPMPSWGVNLRDASAGEPLEAGDHDPSSYYPSFQLDCLRQPYGSG S+GAVES AMASPA   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SPARLEMVGG GKS+RGLGGIAAALEQARNVGGAGAGAGVPETPLRRPG GAGSR SERG AARGG   SCSPVGGYAGFD SAVQGSPVK+RSVGRWRMSE GRRETSAEQGRAACEESPLRSNRNPFSPDRDEDV+QG+AMSMPAPAPRSRLSCGG VTGGAD SPMDTGD+     MTAGMGRGGGK DEG   FLRRVSVGSTCSSSSVPTTAGKKTVQDVTNPSPCDVAAFVPVTPC GKNSAEA RLGGDTAPMSPVSSAGGGVNVSLNVGNGE+ ARGRFATDFEVKEIIG GGFGTVYKVRSRVDGCLYAVKCSRRRFKGETDRQNMLMEVYALAAVCDSAQETINIVRYHQAWIEEERLYIQTELCETSLEKQLESGHRLEISGVYAFLRQTLLGLEILHQHKLVHLDIKPGNIFVKNGQYKLGDFGLVTPVHVRSGTDVVEGDSRYMSKELLNDDHSNLTKCDVFSLGITLYEIISGR LPPNGEEWHRLRSGKAGMPMGLPAELSKTL EMMDPDPARRPSAAELLRYPCLQSEMERQLND+KSELSKERTRNSGLLEEVSALIQKQSHRSGRLSRTITWDNSYFAANG+KGK PS NLSSKPSLGGTPDAAARGGGGAARSNLSAFNAS PSGVFGGG+SAPALFGP VPRPSMAVGSARGA AGA EVGRGV ALSRVEEEGSDSP ASGDM GGASLPASFERLRQA
Sbjct:    1 MDAGAATETARGSSPTRSAQEVLRRMSLNSPPSRTDNPRQVKRAKVLGGEGEGAAASRPFAVPQAVQTPATVRKPPPPSSRAAGLDGPSPMPSWGVNLRDASAGEPLEAGDHDPSSYYPSFQLDCLRQPYGSGASNGAVESAAMASPA---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSPARLEMVGGSGKSSRGLGGIAAALEQARNVGGAGAGAGVPETPLRRPGRGAGSRTSERGTAARGGVYGSCSPVGGYAGFDSSAVQGSPVKKRSVGRWRMSEGGRRETSAEQGRAACEESPLRSNRNPFSPDRDEDVSQGEAMSMPAPAPRSRLSCGGAVTGGADRSPMDTGDL---DAMTAGMGRGGGKGDEGRQGFLRRVSVGSTCSSSSVPTTAGKKTVQDVTNPSPCDVAAFVPVTPCCGKNSAEATRLGGDTAPMSPVSSAGGGVNVSLNVGNGEEAARGRFATDFEVKEIIGAGGFGTVYKVRSRVDGCLYAVKCSRRRFKGETDRQNMLMEVYALAAVCDSAQETINIVRYHQAWIEEERLYIQTELCETSLEKQLESGHRLEISGVYAFLRQTLLGLEILHQHKLVHLDIKPGNIFVKNGQYKLGDFGLVTPVHVRSGTDVVEGDSRYMSKELLNDDHSNLTKCDVFSLGITLYEIISGRALPPNGEEWHRLRSGKAGMPMGLPAELSKTLHEMMDPDPARRPSAAELLRYPCLQSEMERQLNDKKSELSKERTRNSGLLEEVSALIQKQSHRSGRLSRTITWDNSYFAANGAKGKFPSGNLSSKPSLGGTPDAAARGGGGAARSNLSAFNASNPSGVFGGGDSAPALFGPGVPRPSMAVGSARGAGAGAVEVGRGVGALSRVEEEGSDSPSASGDMVGGASLPASFERLRQA 926
[Close]
BLAST of Ec-00_006420.1 vs. uniprot
Match: W7TCU9_9STRA (Membrane-associated tyrosine-and threonine-specific cdc2-inhibitory kinase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TCU9_9STRA)

HSP 1 Score: 292 bits (747), Expect = 4.850e-83
Identity = 151/263 (57.41%), Postives = 188/263 (71.48%), Query Frame = 1 
Query: 1432 GVNVSLNVGNGEKVARGRFATDFEVKEIIGTGGFGTVYKVRSRVDGCLYAVKCSRRRFKGETDRQNMLMEVYALAAVC--DSAQETINIVRYHQAWIEEERLYIQTELCETSLEKQLESGHRLEISGVYAFLRQTLLGLEILHQHKLVHLDIKPGNIFVKNGQYKLGDFGLVTPVHVRSGT--DVVEGDSRYMSKELLNDDHSNLTKCDVFSLGITLYEIISGRPLPPNGEEWHRLRSGKA----GMPMGLPAELSKTLLEMM 2196
            G   SL+ G+G      RF TDF+V  +IG+G FG VY+VRSRVDG  YAVKC+RRRF+G  DR   L EV ALA VC  DS++E +++VRYHQAWIE+ERL++QTELCE SL+  L +G ++    V+ F+RQ LL L++LH+H LVHLD+KPGNIF+K G YKLGDFGLV  V+   G    +VEGDSRYMS ELL D   +LTKCD+FSLG T+YE+  GR LPPNGEEWH LRSG      G P  L ++L + L +MM
Sbjct:  218 GRRTSLHQGHGPTTPVSRFQTDFDVVRVIGSGCFGEVYRVRSRVDGVEYAVKCTRRRFRGPADRNRYLQEVKALAKVCAADSSEEVLHVVRYHQAWIEDERLFMQTELCEESLDGALRAGEKMGFEEVFDFMRQMLLALDVLHRHGLVHLDVKPGNIFIKAGVYKLGDFGLVASVNSSDGLGDSLVEGDSRYMSAELLQDGPKDLTKCDIFSLGATVYEMGRGRALPPNGEEWHALRSGHPPSLKGEPAVLVSDLMRVLAQMM 480
[Close]
BLAST of Ec-00_006420.1 vs. uniprot
Match: A0A1E7FT83_9STRA (Kinase-like protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FT83_9STRA)

HSP 1 Score: 269 bits (687), Expect = 4.900e-78
Identity = 142/262 (54.20%), Postives = 189/262 (72.14%), Query Frame = 1 
Query: 1483 RFATDFEVKEIIGTGGFGTVYKVRSRVDGCLYAVKCSRRRFKGETDRQNMLMEVYALAAVCDSAQE-TINIVRYHQAWIEEERLYIQTELCETSLEKQLE--SGHRLEISGVYAFLRQTLLGLEILHQHKLVHLDIKPGNIFVKNGQYKLGDFGLVTPVHVRSGTDVVEGDSRYMSKELLNDDHSNLTKCDVFSLGITLYEIISGRP--LPPNGEEWHRLRSGKAGMPMGLPAELSKTLLEMMDPDPARRPSAAELLRYPCL 2253
            RF +DF+V   +G+G FG VY+  SR+DGC+YA+K + R  +GE+D+  ML EVYALAA+ D A   T +IVRYHQAW+EE+RLYIQTELC T+L+ ++E  +  +L +S  Y  +R+ LL LE +H++ +VHLDIKP NIF+KN Q+KLGDFGLV+ V   S  DV EGDSRYMSKELL+ DH++LTK D+FSLGIT+YE+  GR   LP NG EW  LRSG+   P+  P +L + +  MM+P    RP A+ LL++P L
Sbjct:    1 RFYSDFDVIAELGSGSFGNVYQALSRLDGCMYAIKVAHRAARGESDKDRMLKEVYALAALSDQADTATFHIVRYHQAWMEEQRLYIQTELCTTTLQAEIEQVAPMQLPLSTRYKCMREILLALEFIHRNGMVHLDIKPENIFLKNDQFKLGDFGLVSKV---SSHDVEEGDSRYMSKELLSGDHADLTKSDIFSLGITMYELCLGRSKALPSNGPEWQSLRSGRIIPPLNTPDDLLQIIKSMMNPTYQERPCASGLLKFPEL 259
[Close]
BLAST of Ec-00_006420.1 vs. uniprot
Match: A0A6T8GSH0_9STRA (Hypothetical protein n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A6T8GSH0_9STRA)

HSP 1 Score: 275 bits (702), Expect = 6.490e-77
Identity = 154/312 (49.36%), Postives = 211/312 (67.63%), Query Frame = 1 
Query: 1477 RGRFATDFEVKEIIGTGGFGTVYKVRSRVDGCLYAVKCSRRRFKGETDRQNMLMEVYALAAVCDSAQET-INIVRYHQAWIEEERLYIQTELCETSLEKQLESGHRLEISGVYAFLRQTLLGLEILHQHKLVHLDIKPGNIFVKNGQYKLGDFGLVTPVHVRSGTDVVEGDSRYMSKELLNDDHSNLTKCDVFSLGITLYEIISGRPLPPNGEEWHRLRSGKAGMPMGLPAELSKTLLEMMDPDPARRPSAAELLRYPCLQSEMERQLNDQKSELSKERTRNSGLLEEVSAL--IQKQSHRSGRLSRTITWD 2403
            + RFA DFE    +GTG FG VYK  S++DGC+YAVK +RR  KG  DR  ML EVYALAA+ D A+    +IVRYHQAW+E++RLYIQTELC ++L++  E   + +    +  LR+ LL LE+LH++ +VHLDIKP NIF KN Q+KLGDFGLV+ +   S  DV EGDSRYMS ELL+ DHS+LTK DVFSLG +LYE+  GRPLP NG+EW R+R+G       +  +L K ++EMM+P+ ++RP+A  LL+   L SE ++QL  ++++  K     +   ++      I+K S R  ++ R+ TWD
Sbjct:  179 KSRFAEDFEEIGKLGTGSFGMVYKCLSKLDGCMYAVKVARREAKGVADRDRMLKEVYALAALSDRAESAAFHIVRYHQAWMEDDRLYIQTELCTSTLQE--EKSTQFDEQRCFKLLREILLALELLHRNDMVHLDIKPENIFYKNNQWKLGDFGLVSKI--TSHNDVEEGDSRYMSMELLSGDHSDLTKSDVFSLGASLYEVCLGRPLPANGDEWQRIRAGILYPMPHISQDLRKLIIEMMNPEASQRPTAKHLLQRRQLMSEEQQQLLTERNKAEKANMALAAHQKQTFERFKIEKPSRR--KMVRSSTWD 484
[Close]
BLAST of Ec-00_006420.1 vs. uniprot
Match: A0A7S2SM20_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SM20_9STRA)

HSP 1 Score: 260 bits (664), Expect = 1.200e-74
Identity = 145/292 (49.66%), Postives = 196/292 (67.12%), Query Frame = 1 
Query: 1531 FGTVYKVRSRVDGCLYAVKCSRRRFKGETDRQNMLMEVYALAAVCDSAQETINIVRYHQAWIEEERLYIQTELCETSLEKQLESGHRLEISGVYAFLRQTLLGLEILHQHKLVHLDIKPGNIFVKNGQYKLGDFGLVTPVHVRSGTDVVEGDSRYMSKELLNDD-HSNLTKCDVFSLGITLYEIISGRPLPPNGEEWHRLRSGKAG-MPMGLPAELSKTLLEMMDPDPARRPSAAELLRYPCLQSEMERQLNDQKSELSKERTRNSGLLEEVSALIQKQSHRSGRLSRTITW 2400
            FG V + R R+DGC YA+K +++RFKG +DR  ML EVYAL+ +C + +ET +IVRYHQAWIE+ERLYIQ ELCE +LE+ L     +  + +Y F RQ  L L++LH++ LVHLDIKPGNIF+K+ +YKLGDFGLV+P +  +G +V+EGDSRYMSKELL+     +LTKCD+FSLG T+Y+I     LP NGE+W  +R G+    P   P  L   +  MM P+PA RPSA +LL  P LQS++ER+L     EL + + +       + A + KQ     +L R+ TW
Sbjct:    2 FGRVLRCRGRIDGCEYAIKSTKQRFKGRSDRSRMLQEVYALSHLC-AVEETPHIVRYHQAWIEDERLYIQMELCERTLEQALAENTIMSATEMYNFARQMSLALDVLHRNNLVHLDIKPGNIFMKHEKYKLGDFGLVSPAN--TGDEVMEGDSRYMSKELLSMTVPRDLTKCDIFSLGCTMYQICRREQLPGNGEDWRAMREGQLQPFPATTPGSLELLVRFMMKPEPADRPSAEQLLHDPNLQSDVERRL-----ELEQHQNKR------LRAALAKQHMAKTKLCRSNTW 279
[Close]
BLAST of Ec-00_006420.1 vs. uniprot
Match: A0A7S2USI9_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2USI9_9STRA)

HSP 1 Score: 259 bits (661), Expect = 1.050e-72
Identity = 146/313 (46.65%), Postives = 208/313 (66.45%), Query Frame = 1 
Query: 1483 RFATDFEVKEIIGTGGFGTVYKVRSRVDGCLYAVKCSRRRFKGETDRQNMLMEVYALAAVCD--SAQETINIVRYHQAWIEEERLYIQTELCETSLEKQLESGHRLEISGVYAFLRQTLLGLEILHQHKLVHLDIKPGNIFVKNGQYKLGDFGLVTPVHVRSGT-DVVEGDSRYMSKELLNDDHSNLTKCDVFSLGITLYEIISGRPLPPNGEEWHRLRSGKAGMPMGLPAELSKTLLEMMDPDPARRPSAAELLRYPCLQSEMERQLNDQKSELSKERTRNSGLLEEVSALI---QKQSHRSGRLSRTITWD 2403
            R+  DF+   ++G G FG VYKV SR+DGC YAVK  +R  +G  D+++ML EVYALAA+C   S+  + +IVRYHQAW+E+  LYIQTELC ++L+ ++  G  ++   +   LR+ LL LE++H++ +VHLDIKP NIFVKN Q+KLGDFGL       SG  DV EGD+RYM +ELL  DHSNLTKCD+FSLG T+YE+  GR L  +G EW  +R+G      G   +L   LL MM PDPA+RPSA +LL+   L S+ +++L  +K+++ +E      + EE   ++   +KQ+   G+L R+ +++
Sbjct:   87 RYLNDFQEVGVLGCGSFGNVYKVISRLDGCFYAVKVVKRAARGSNDKEHMLKEVYALAALCSNSSSSASFHIVRYHQAWMEDNHLYIQTELCTSTLQHEMSRG-LMDNKRIVMMLRELLLALELIHKNDMVHLDIKPENIFVKNNQFKLGDFGLANKT---SGPMDVEEGDARYMCRELLAGDHSNLTKCDIFSLGATVYEVCLGRSLATSGTEWQSIRNGNISK--GSVNDLYDILLLMMHPDPAQRPSATDLLKKRHLLSDEQKELIAEKNKV-REANMALAVHEERFKIMMSREKQARERGKLVRSTSFE 392
[Close]
BLAST of Ec-00_006420.1 vs. uniprot
Match: A0A1Z5KQN8_FISSO (Wee1-like protein kinase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KQN8_FISSO)

HSP 1 Score: 270 bits (689), Expect = 2.520e-72
Identity = 153/325 (47.08%), Postives = 206/325 (63.38%), Query Frame = 1 
Query: 1312 SPCDVAAF--VPVTPCRGKNSAEAMRLGGDTAPMSPVSSAGGGVNVSLNVGNGEKVARGRFATDFEVKEIIGTGGFGTVYKVRSRVDGCLYAVKCSRRRFKGETDRQNMLMEVYALAAVCDSAQE-TINIVRYHQAWIEEERLYIQTELCETSLEKQLESGHRLEISGVYAFLRQTLLGLEILHQHKLVHLDIKPGNIFVKNGQYKLGDFGLVTPVHVRSGTDVVEGDSRYMSKELLNDDHSNLTKCDVFSLGITLYEIISGRPLPPNGEEWHRLRSGKAGMPMGLPAELSKTLLEMMDPDPARRPSAAELLRYPCLQSEMERQL 2277
            SP D+ +F  VP TP + K             P  P +        S ++ + E+ ++ RF  DF++   +G G FG VYKV SR+DGC+YA+K + R+ KG  DR  ML EVYALA + D A   T +IVRYHQAW+E++RLYIQTELC  +L  ++     L     Y  LR+ LL L  +H++K+ HLDIKP NIF+KN QYKLGDFGLVT     +  +V EGDSRYMS ELL+ D S+LTK D+FSLGI++YE+  G+PLP +GE+W  LR+G+     G   EL+  +  MM+P P +RPSA ELL++P L S+ E+ L
Sbjct:  428 SPTDIQSFPLVPPTPIKQKRG----------PPQPPYARP----RSSSSIEHTEQSSKSRFHGDFDIISELGKGSFGCVYKVLSRLDGCMYAIKAAHRQAKGRADRDRMLQEVYALATLSDQADTATFHIVRYHQAWMEDDRLYIQTELCTGTLLDEIAHCGGLSEPRKYKLLREILLALAFIHRNKMCHLDIKPENIFLKNDQYKLGDFGLVTVAS--ASQNVEEGDSRYMSMELLSGDRSDLTKSDIFSLGISVYELCLGQPLPTSGEKWQDLRAGRFDPLPGTSVELTMLIKRMMNPKPDQRPSATELLKHPKLLSDEEKAL 736
[Close]
BLAST of Ec-00_006420.1 vs. uniprot
Match: A0A6U3YXL2_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3YXL2_9STRA)

HSP 1 Score: 272 bits (696), Expect = 2.930e-72
Identity = 153/312 (49.04%), Postives = 206/312 (66.03%), Query Frame = 1 
Query: 1471 VARGRFATDFEVKEIIGTGGFGTVYKVRSRVDGCLYAVKCSRRRFKGETDRQNMLMEVYALAAVCDSAQET-INIVRYHQAWIEEERLYIQTELCETSLEKQLESGHRLEISGVYAFLRQTLLGLEILHQHKLVHLDIKPGNIFVKNGQYKLGDFGLVTPVHVRSGTDVVEGDSRYMSKELLNDDHSNLTKCDVFSLGITLYEIISGRPLPPNGEEWHRLRSGKAGMPMGLPAELSKTLLEMMDPDPARRPSAAELLRYPCLQSEMERQLNDQKSELSKERTRNSGLLEEVSALIQKQSHRSGRLSRTITWD 2403
            ++  RF +DF++   IG G FG+VYK  SRVDGCLYAVK ++R+ KG TDRQ ML EVYALAA+ D A     +IVRYHQAWIE+ RL+IQTELC ++L + + +G   E    Y  LR+ LL LE++H+  +VHLDIKP NIF+KN Q+KLGDFGLV+ +   + +DV EGDSRYMS ELL+ DH +LTKCD+FSLG T+YE+  GR LP NG+EW  +R+G        P EL K + +MM P+   RPSA  LL+   L S+   QL  +K+++++     +   E +  L   +    G+L R  TW+
Sbjct:  605 LSESRFLSDFQIVTQIGAGSFGSVYKCLSRVDGCLYAVKVAKRKAKGMTDRQRMLKEVYALAALSDQADTAAFHIVRYHQAWIEDSRLHIQTELCTSTLMEVMANGMMGE-KRRYKLLREILLALELIHKSDMVHLDIKPENIFMKNDQFKLGDFGLVSKI---TNSDVEEGDSRYMSMELLSGDHKDLTKCDIFSLGATMYEVCLGRFLPANGQEWQDIRAGTLSPMRETPTELQKIVEDMMQPNAELRPSATTLLKKRQLLSDEXXQLLVEKNKVTEATLALAAEKERLRKLTPPRGK--GKLIRANTWN 910
[Close]
BLAST of Ec-00_006420.1 vs. uniprot
Match: A0A7S1CTE8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S1CTE8_9STRA)

HSP 1 Score: 253 bits (646), Expect = 3.320e-72
Identity = 141/267 (52.81%), Postives = 182/267 (68.16%), Query Frame = 1 
Query: 1483 RFATDFEVKEIIGTGGFGTVYKVRSRVDGCLYAVKCSRRRFKGETDRQNMLMEVYALAAVCDSAQE-TINIVRYHQAWIEEERLYIQTELCETSLEKQLESGHRLEISGVYAFLRQTLLGLEILHQHKLVHLDIKPGNIFVKNGQYKLGDFGLVTPVHVRSGTDVVEGDSRYMSKELLNDDHSNLTKCDVFSLGITLYEIISGRPLPPNGEEWHRLRSGKAGMPMGLPA-ELSKTLLEMMDPDPARRPSAAELLRYPCLQSEMERQL 2277
            RFA DFEV   +G G FG VYKVR+R D  LYA+K ++R  +G++DR  ML EVYALAA+ D      ++IVRYHQAW+E  RLYIQTELC+++L  ++  G   E   +Y  LR+ LL L+ +HQ  ++HLDIKP NIF+KN QYKLGDFGLV+ +   +  DV EGDSRYMS ELL+ D  +LTK D+FSLG TLYEI  GR LP NG+EW  +R G   +PMG  + +    +  MM P+   RP+A+ELL+   L SE +RQL
Sbjct:   11 RFAADFEVVGTLGNGAFGCVYKVRNRTDLRLYAIKAAKREARGKSDRDRMLQEVYALAALSDQTSAGAMHIVRYHQAWMEGNRLYIQTELCQSTLMDEVSEGAMNE-KRLYKLLREILLALDYVHQSGMIHLDIKPDNIFIKNDQYKLGDFGLVSKIE--NHDDVEEGDSRYMSMELLSGDLEDLTKSDIFSLGATLYEICLGRGLPENGQEWQDIRKGVL-LPMGNNSFDFQMIVQTMMSPEKEDRPTASELLKKRQLLSEEQRQL 273
[Close]
BLAST of Ec-00_006420.1 vs. uniprot
Match: A0A448ZQ53_9STRA (Protein kinase domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZQ53_9STRA)

HSP 1 Score: 267 bits (682), Expect = 2.220e-70
Identity = 155/316 (49.05%), Postives = 207/316 (65.51%), Query Frame = 1 
Query: 1384 LGGDTAPMSPVSSAGGGVNVSLNVGNGEKVARG------RFATDFEVKEIIGTGGFGTVYKVRSRVDGCLYAVKCSRRRFKGETDRQNMLMEVYALAAVCDSAQE-TINIVRYHQAWIEEERLYIQTELCETSLEKQLESGH--RLEISGVYAFLRQTLLGLEILHQHKLVHLDIKPGNIFVKNGQYKLGDFGLVTPVHVRSGTDVVEGDSRYMSKELLNDDHSNLTKCDVFSLGITLYEIISGRP--LPPNGEEWHRLRSGKAGMPMGLPAELSKTLLEMMDPDPARRPSAAELLRYPCLQSEMERQLNDQKSEL 2298
             GGD +  S     GGG N   +   G + A G      RF +DF+V + +G+G FG V+K  SR+DGC+YA+K + R  KG +DR  ML EVYAL+A+ D +   T +IVRYHQAW+EE+RLYIQTELC T+LE  ++     RL+ +  +  LR+ LL LE +H +K+VHLDIKP NIF+KNG +KLGDFGLV+ V   S  DV EGDSRYMS ELL+ DH +LTK D+FSLGI +YE+  GR   LPPNG+EW  LRSG    P     EL + + +MM+P    RP A +LL+ P L SE ++ L +++ ++
Sbjct:  586 FGGDDS--SDEGXGGGGANRHRSRHQGPETAVGDPRPPSRFHSDFDVIDELGSGSFGNVFKALSRLDGCMYAIKVAHRVAKGNSDRDRMLKEVYALSALSDQSDTATFHIVRYHQAWMEEQRLYIQTELCTTTLEAAMQEAAPGRLDTTTRFKCLREILLALEFIHGNKMVHLDIKPENIFLKNGLFKLGDFGLVSKV---SSHDVEEGDSRYMSMELLSGDHKDLTKSDIFSLGIAVYEVCLGRTKALPPNGDEWRALRSGCIVXPPYTXNELFQIIKKMMNPTYXERPCATDLLKLPELLSEEQKLLFEEREKV 896
The following BLAST results are available for this feature:
BLAST of Ec-00_006420.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K0E1_9PHAE0.000e+094.42Protein kinase domain-containing protein n=2 Tax=E... [more]
W7TCU9_9STRA4.850e-8357.41Membrane-associated tyrosine-and threonine-specifi... [more]
A0A1E7FT83_9STRA4.900e-7854.20Kinase-like protein (Fragment) n=1 Tax=Fragilariop... [more]
A0A6T8GSH0_9STRA6.490e-7749.36Hypothetical protein n=2 Tax=Proboscia inermis Tax... [more]
A0A7S2SM20_9STRA1.200e-7449.66Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2USI9_9STRA1.050e-7246.65Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A1Z5KQN8_FISSO2.520e-7247.08Wee1-like protein kinase n=2 Tax=Fistulifera solar... [more]
A0A6U3YXL2_9STRA2.930e-7249.04Hypothetical protein n=3 Tax=Ditylum brightwellii ... [more]
A0A7S1CTE8_9STRA3.320e-7252.81Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
A0A448ZQ53_9STRA2.220e-7049.05Protein kinase domain-containing protein n=1 Tax=P... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:10110697..10123130 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score1640.2
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D7G343
Length5035
KEGG koko:K06632,ko:K06633
KEGG Pathwayko04110,ko04114,ko04914,map04110,map04114,map04914
KEGG ModuleM00693
Hectar predicted targeting categoryother localisation
Gene idEc-00_006420.1
EggNOG free text desc.protein kinase activity
EggNOG OGsKOG0601@1,KOG0601@2759
EC2.7.11.1
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko01009,ko03400
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_006420Ec-00_006420Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 10110697..10123130 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_006420.1.12Ec-00_006420.1.12Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 10110697..10113327 -
Ec-00_006420.1.11Ec-00_006420.1.11Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 10113648..10113852 -
Ec-00_006420.1.10Ec-00_006420.1.10Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 10114445..10114603 -
Ec-00_006420.1.9Ec-00_006420.1.9Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 10114882..10115037 -
Ec-00_006420.1.8Ec-00_006420.1.8Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 10115443..10115619 -
Ec-00_006420.1.7Ec-00_006420.1.7Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 10116065..10116223 -
Ec-00_006420.1.6Ec-00_006420.1.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 10116771..10117101 -
Ec-00_006420.1.5Ec-00_006420.1.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 10117825..10117991 -
Ec-00_006420.1.4Ec-00_006420.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 10118519..10118690 -
Ec-00_006420.1.3Ec-00_006420.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 10119590..10120143 -
Ec-00_006420.1.2Ec-00_006420.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 10120842..10121030 -
Ec-00_006420.1.1Ec-00_006420.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 10122996..10123130 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0064203UTR:Ec-00_006420.1Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_00 10110697..10112938 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_006420.1CDS:Ec-00_006420.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 10112939..10113327 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_006420.1Ec-00_006420.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 10112939..10123130 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_006420.1 ID=Ec-00_006420.1|Name=Ec-00_006420.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=931bp
MDAGAATETARGSSPTRSAQEVLRRMSLNSPPSRTDNPRQVKRAKVLGGE
GGGAAASRPFAVPQAVQTPATVRKPPPPSSRAAGLDGPSPMPSWGVNLRD
ASAGEPLEAGDHDPSSYYPSFQLDCLRQPYGSGTSDGAVESPAMASPAGG
GGGGGAGPSPTSTAMDDDDDQSSGGGGGGGGGGSRRTTRGGGVSLRSMGG
GEEDDAFAPPPSPARLEMVGGGGKSTRGLGGIAAALEQARNVGGAGAGAG
VPETPLRRPGSGAGSRASERGAAARGGGDSSCSPVGGYAGFDRSAVQGSP
VKRRSVGRWRMSEEGRRETSAEQGRAACEESPLRSNRNPFSPDRDEDVAQ
GDAMSMPAPAPRSRLSCGGPVTGGADGSPMDTGDVGDFATMTAGMGRGGG
KADEGSFLRRVSVGSTCSSSSVPTTAGKKTVQDVTNPSPCDVAAFVPVTP
CRGKNSAEAMRLGGDTAPMSPVSSAGGGVNVSLNVGNGEKVARGRFATDF
EVKEIIGTGGFGTVYKVRSRVDGCLYAVKCSRRRFKGETDRQNMLMEVYA
LAAVCDSAQETINIVRYHQAWIEEERLYIQTELCETSLEKQLESGHRLEI
SGVYAFLRQTLLGLEILHQHKLVHLDIKPGNIFVKNGQYKLGDFGLVTPV
HVRSGTDVVEGDSRYMSKELLNDDHSNLTKCDVFSLGITLYEIISGRPLP
PNGEEWHRLRSGKAGMPMGLPAELSKTLLEMMDPDPARRPSAAELLRYPC
LQSEMERQLNDQKSELSKERTRNSGLLEEVSALIQKQSHRSGRLSRTITW
DNSYFAANGSKGKSPSDNLSSKPSLGGTPDAAARGGGGAARSNLSAFNAS
EPSGVFGGGESAPALFGPWVPRPSMAVGSARGAAAGAAEVGRGVVALSRV
EEEGSDSPPASGDMAGGASLPASFERLRQA*
back to top

spliced messenger RNA

>Ec-00_006420.1 ID=Ec-00_006420.1|Name=Ec-00_006420.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=5035bp|location=Sequence derived from alignment at chr_00:10110697..10123130- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGGATGCCGGAGCTGCGACCGAGACGGCGCGGGGGTCAAGCCCGACGAG
GTCGGCGCAAGAGGTGCTGCGCAGGATGAGCCTCAACAGCCCTCCCTCCC
GTACCGATAACCCTCGTCAAGTCAAGAGGGCAAAGGTGCTCGGTGGGGAA
GGCGGAGGAGCGGCAGCCTCCCGGCCTTTCGCCGTGCCGCAGGCTGTACA
GACCCCGGCCACCGTCAGGAAACCGCCGCCGCCGTCCTCGCGCGCCGCCG
GCCTCGATGGCCCCTCTCCCATGCCCTCCTGGGGGGTGAACCTAAGGGAT
GCCTCCGCCGGGGAACCGCTGGAGGCGGGAGACCACGACCCTAGCTCCTA
CTACCCATCCTTCCAGCTAGACTGCCTCCGTCAGCCCTACGGTAGCGGCA
CCTCCGATGGAGCGGTCGAGTCTCCAGCTATGGCCTCTCCGGCCGGCGGC
GGTGGCGGCGGCGGCGCGGGCCCTTCCCCTACATCCACGGCAATGGACGA
CGACGACGATCAAAGCAGCGGCGGCGGCGGCGGCGGCGGCGGCGGAGGCT
CCCGACGCACGACCCGCGGCGGCGGGGTCTCGTTGCGGTCCATGGGGGGA
GGGGAGGAAGACGATGCGTTTGCGCCCCCGCCGTCCCCGGCCAGGCTGGA
GATGGTGGGCGGTGGTGGCAAGAGTACGAGGGGGTTGGGGGGGATAGCCG
CCGCTCTGGAACAAGCAAGAAATGTCGGGGGGGCGGGAGCGGGGGCAGGT
GTGCCGGAAACGCCTCTGAGAAGGCCGGGGAGCGGGGCTGGGAGCAGAGC
TTCTGAGCGAGGAGCCGCGGCGCGTGGCGGCGGCGACAGCAGCTGTTCTC
CCGTGGGGGGGTACGCAGGGTTTGACAGGTCGGCTGTTCAGGGATCGCCG
GTTAAGAGGAGGAGCGTAGGGCGGTGGCGTATGTCGGAGGAGGGCAGGCG
CGAGACGAGCGCAGAGCAGGGCCGAGCAGCCTGCGAGGAGTCCCCGCTCC
GCAGCAACAGGAACCCGTTCTCGCCGGACAGGGATGAAGACGTTGCTCAG
GGAGATGCGATGTCCATGCCCGCCCCCGCACCGCGCTCGCGGCTGTCTTG
CGGGGGGCCCGTGACTGGGGGCGCCGACGGATCTCCGATGGACACCGGAG
ATGTCGGAGATTTCGCGACAATGACGGCGGGGATGGGACGAGGAGGAGGC
AAAGCAGACGAGGGCAGCTTCCTGCGGAGGGTAAGCGTTGGCAGCACCTG
CTCCTCCTCCTCCGTCCCCACCACCGCTGGCAAGAAAACAGTCCAGGACG
TTACCAATCCCAGCCCCTGTGACGTGGCCGCCTTCGTGCCGGTAACCCCA
TGCCGCGGCAAGAACAGCGCGGAGGCCATGAGGCTGGGGGGGGACACCGC
CCCAATGTCCCCGGTTTCTAGTGCCGGCGGAGGCGTGAATGTGTCTCTGA
ACGTCGGGAACGGGGAGAAGGTGGCGCGGGGCAGGTTCGCTACCGATTTC
GAGGTTAAGGAGATCATTGGCACGGGGGGCTTCGGGACAGTGTACAAGGT
GCGGAGTCGTGTGGACGGCTGCCTGTACGCGGTGAAGTGCAGCAGGCGGC
GTTTCAAGGGCGAGACGGACCGGCAAAACATGCTCATGGAGGTGTACGCC
CTCGCTGCCGTTTGCGACTCTGCCCAGGAGACGATCAACATCGTTCGCTA
CCACCAGGCGTGGATCGAGGAGGAGCGTCTGTACATTCAGACCGAGCTGT
GCGAGACCTCGTTGGAGAAGCAGCTGGAGAGCGGGCACCGCCTAGAGATA
TCGGGCGTCTACGCGTTTCTGAGGCAGACGCTGCTGGGGCTGGAGATTCT
GCACCAGCACAAGCTCGTTCACCTCGACATCAAGCCGGGGAACATCTTCG
TGAAGAACGGCCAGTACAAGCTGGGAGACTTCGGGCTGGTGACCCCTGTG
CACGTTAGGTCCGGCACGGACGTCGTGGAGGGAGACTCGCGGTACATGTC
CAAGGAGCTCTTGAACGACGACCACTCAAACCTCACCAAGTGTGATGTGT
TCTCGCTGGGTATCACCCTTTACGAGATAATCTCGGGCAGGCCTTTGCCG
CCTAACGGAGAAGAGTGGCACCGCCTTCGGTCCGGCAAGGCGGGCATGCC
GATGGGGCTCCCGGCGGAGCTCTCCAAGACCCTGCTTGAGATGATGGACC
CCGATCCAGCACGCCGGCCGTCTGCTGCGGAGCTCCTACGGTACCCTTGC
CTGCAGAGCGAGATGGAAAGACAGCTGAACGACCAGAAGTCGGAGCTCAG
CAAGGAGAGGACGCGCAACTCTGGGCTGTTGGAGGAGGTTTCGGCGCTGA
TCCAGAAGCAGAGCCACAGGAGCGGTCGCCTCAGCCGGACGATTACCTGG
GACAACTCGTATTTCGCGGCAAACGGTTCCAAGGGGAAATCACCCTCTGA
CAACCTGTCGTCGAAACCCTCCCTGGGCGGAACTCCCGATGCCGCCGCAC
GTGGAGGAGGCGGAGCTGCGCGGTCCAACCTGTCCGCGTTCAATGCGTCG
GAACCGTCCGGTGTCTTCGGGGGCGGTGAGTCAGCTCCCGCTCTCTTCGG
CCCCTGGGTCCCGCGGCCTTCCATGGCGGTCGGATCGGCTCGCGGCGCAG
CAGCGGGAGCTGCCGAAGTCGGTCGTGGGGTGGTGGCGTTGTCCAGGGTG
GAGGAGGAAGGGTCCGACTCCCCGCCGGCGTCGGGGGACATGGCCGGGGG
GGCGAGTCTTCCGGCCTCATTTGAGCGTCTGCGGCAGGCGTAGGGCGGCG
TCCCAGCCGCTTTTCCATCCAAGTATATAGAACTGGGGTGGTGGATGGGC
GGGCCGGGGGTCTTTGATTTGGCGGTGGTTATAGGGTTAACGCGTCTGTG
GCGATCGCTTCCGGACAGCGGCGCTAGCGGCGCACACGGGTGTCCGCAGA
ACAGTTGTATTTTCGAGAGTAGAGTGCATGGGAGCGAGGTTTCGGGAGTT
GAAGGCAGGTGCTTGCGGAGAGAGAGGCAGACGTCTACAATAGTGATATT
AATATCTTCATGTTTTGTATGTGGCAGGTGTTTTTTCATGGTCGAGAAAC
ACGAGCATGCGTTGGTATCATATGTGGCATTGTATGGTGAAGGAAGGCCG
TACGGCTCTTTTGGTTGGTTGTTTTTTGGTGTTGTTCGTGTGTTTGGTTC
ATGCAAAAGCCAGCCATAGCGGCAGCAACGCTATTGTAGCTATGACAGCT
GCGCTAGCTACCCCCGTGAGGGAGAATCAAAACTGCGGTGGGTGTCGAGC
GTTCTTACTGCTGTAGGGCGAGATGTTTGTGGTTCAGGTTCGGGTGGAGT
AAATGTAGCCCTCCATGAAAGGAAAAAAATAAAATAACAGGATGCAAGGG
CTGCTGCAAACAGGGGATGGGGAGGGTTGGAGGAAAAGCCTGCGAAACAA
CTACTTTACCAGGGTGGTGTTGGTGTTGAAGTCCATCCCCAACCCTGGTC
TGCAGGGGAGGATTGTCATGCAGGCGTGGGGGATTACACATGTATGATAC
CGTATTTTAAAGTCATCTTGCCGAAAATGTTTTTTTTTTTGCTAATCAAG
TCCCATTACATCCATTGAACGAACGCACACATCTCACGATCACGAAAGTT
AATGCGAGGGGCCGAAATCGCAGCAGGTACTTTGCACGGCGAAGTCAAGG
GAGTAATTTAGTTAACCACGCTGGTAGCGGTATCGTGGGAGTTGTGTGCC
CCCTTTTCTGGAGTTTGGTGCATGCGCGTTGTCCTGTTGTAAGCTGGGCT
TAGATTTCACAACTTTGTACTTGCTGGGAGGGGGGCTAGTCCACGAAGAA
ATATGTATGCGTACTACGTGTTATAGGCTACTAACAAATAGTATCGGGTT
TTAACCGTACGTGTGGGTGGCTCATTCGGCTGGAGTTCCAATGGTTTCCA
TGTCTGTCGCGGCGGTGTGATGGGAATGGGGGGAGGGTCTGGAATCGGTG
CTTGATGGTTTGTTGGGAAGTTATCTTTGCATGGTTTATTGAGTAATGCG
GTCGTAAACAGCAAAAGTCTAGCGGTCGTGTTGGCGAGAGAGTATTGTAC
TGGAAAATAAGGGATTGATGATGCTTCCCCGTCCCCCTGCGGAGTAGTAC
CATACTTTTCGCTGGATGTATGGCGTACATGTACCACCTAAATAGTTGGA
TTTGCAATCGCATGTGGCGCATCTGCCACGCTGCCGCCGTAGTAGTCAGT
CAGTCGACGTGATTGGCGTCGTCGTCGTCTTTTTTCCGTGTATACTGTAC
TTGGCCGGTTTGCTTGCTGTGGCGCGCGCAGCTGCTCTCCATGTCTCCAC
GCTGCGTCACTCCGAGTCCATTTACCAACATTTTCATGTGCTCCGTGTGT
TGCGCACCGCACGAGCGCCGTTGATAGGTGCCCGCCCACGCAGCATATGC
TTGGCAACGATGATTTAACATCAGGCAGGTCGTTTGTGTGTTGGGGGCGT
TTGTTGCGAGTTTCTTGTTCGTCTGGCCTCCCTGTGACTTGTGAGGTCAA
GATATACTTGTAGAAGGCAGATAGTGCAAGTCTAGCAGGCTGCCGTACCG
CGATCGCCGTGTTGGCCGCCCTCTGTGTATTTTGAGTGTCCGATGTCTCT
CGTTGTGTGATTGCATAGAGCGTCTTATGTTGTCGGTGGCTCCGTTGCTA
ATCGCTCTGGGTGTTTTCGAGCACCCGTCTTTATTTTCGCTCGAACAAAT
CTGTATTTGATCGTCTTTTGCTTGAATCCTGGGACCTTCGCCCAACCAAG
CAGAGCACAAGTATCCGGTTGTGATCAAATCTCACTCGGGGAACAACTAC
ATGTACATGTCTACGCCAGGTGGTGGATGAGATTAAGTGGGAAACGACTA
ATGGCCACGGCGAAACAGATGTCATGTTACTGCACGAGCATTCGTTTCTG
GTTCTTTCTATGAGCCGCGCGCGTATAGCTCGTCGTCAAGCATGCCGAGG
GGTCTTGTACCCCGTCGAAGCAACGCGTGAGCGCC
back to top

protein sequence of Ec-00_006420.1

>Ec-00_006420.1 ID=Ec-00_006420.1|Name=Ec-00_006420.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=931bp
MDAGAATETARGSSPTRSAQEVLRRMSLNSPPSRTDNPRQVKRAKVLGGE
GGGAAASRPFAVPQAVQTPATVRKPPPPSSRAAGLDGPSPMPSWGVNLRD
ASAGEPLEAGDHDPSSYYPSFQLDCLRQPYGSGTSDGAVESPAMASPAGG
GGGGGAGPSPTSTAMDDDDDQSSGGGGGGGGGGSRRTTRGGGVSLRSMGG
GEEDDAFAPPPSPARLEMVGGGGKSTRGLGGIAAALEQARNVGGAGAGAG
VPETPLRRPGSGAGSRASERGAAARGGGDSSCSPVGGYAGFDRSAVQGSP
VKRRSVGRWRMSEEGRRETSAEQGRAACEESPLRSNRNPFSPDRDEDVAQ
GDAMSMPAPAPRSRLSCGGPVTGGADGSPMDTGDVGDFATMTAGMGRGGG
KADEGSFLRRVSVGSTCSSSSVPTTAGKKTVQDVTNPSPCDVAAFVPVTP
CRGKNSAEAMRLGGDTAPMSPVSSAGGGVNVSLNVGNGEKVARGRFATDF
EVKEIIGTGGFGTVYKVRSRVDGCLYAVKCSRRRFKGETDRQNMLMEVYA
LAAVCDSAQETINIVRYHQAWIEEERLYIQTELCETSLEKQLESGHRLEI
SGVYAFLRQTLLGLEILHQHKLVHLDIKPGNIFVKNGQYKLGDFGLVTPV
HVRSGTDVVEGDSRYMSKELLNDDHSNLTKCDVFSLGITLYEIISGRPLP
PNGEEWHRLRSGKAGMPMGLPAELSKTLLEMMDPDPARRPSAAELLRYPC
LQSEMERQLNDQKSELSKERTRNSGLLEEVSALIQKQSHRSGRLSRTITW
DNSYFAANGSKGKSPSDNLSSKPSLGGTPDAAARGGGGAARSNLSAFNAS
EPSGVFGGGESAPALFGPWVPRPSMAVGSARGAAAGAAEVGRGVVALSRV
EEEGSDSPPASGDMAGGASLPASFERLRQA*
back to top

mRNA from alignment at chr_00:10110697..10123130-

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_006420.1 ID=Ec-00_006420.1|Name=Ec-00_006420.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=12434bp|location=Sequence derived from alignment at chr_00:10110697..10123130- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGATGCCGGAGCTGCGACCGAGACGGCGCGGGGGTCAAGCCCGACGAG
GTCGGCGCAAGAGGTGCTGCGCAGGATGAGCCTCAACAGCCCTCCCTCCC
GTACCGATAACCCTCGTCAAGTCAAGAGGGCAAAGGTGAGCACTGCTGCT
GAATCCGCGTGCTGTCCTCCACGCCGTTGGTCGTTGCGGTTAACATGTGG
TACTTCGTGCTGGGTGGGTAGCGGCTTTTGTACCGTTGCCCGCGTCAAGA
AACGAATTTGTCTTGCTCATATGTGCACGTTTTCGGCACACTTGTGGGGA
AGTCTCCATCGCCACGATTCGGCCGTTGGTGTATTTATTCATCTTGGGGT
GTGGCATGGTTTAACATCCACAAAGATGCGCAAGCCCCCTCGAACCCTGC
GCCCGCTTTCGGTGGTCACGAGTTGCAGGATAAGTGATGTATAGAGTTTG
GTTGCGTTGTTTTGTTATTTTGCCGTTCGCGGGGGGGGGAGGACTAGGTT
TTGCACGTGGTGATTTGCAAATTTGGCAGCAAGGCGAAGACTGCTCCTGT
TGAGCGTTTCCGAGCCGTGGTAAGAAAACCAGGGCAGACGAGTTTTGTTG
ACATGCATCTTGAACCACCTCTCGAAAGCCACAGAATCAAGCCTAAGACA
CTGACCGAATCGGCCCATCGCATGCAACAGCGTGCAACAGAGTGGCAGTA
TAAGGGGTTGCGGAAGGATAAAAGCCCGTTCGCCGCTGCTGTACGTTGAA
GCCGGCGGGGGGTGGCTCCGAGACTCTCCGAATATTAATATTGTTTTCCG
TGGTGTCCGACCGGGACTCGTACAGCGAAGGCTGCGTCTGATGTCGATCT
GAAAGCCTGACAGATGGGCACGATGTAGAGAGGCAAGCTCTTTTGCACAC
AGCGGTAGTCTCCGCCGTTTTCCGCCGATGCCATGAGCATGCGCTCGGTG
TTCGCCCCGTCGTTATCTGAGATTCGGCGTATGCTCCTGTTGTGCAGGGG
TTGAGCGTTGTTGTAAGACGTGGGTGGGCGGAATGGCCTGCCCTTCAGTG
ATGATGAGTAAACAGTCAGTCAACTGGTGGGCAGCGAGTGCTGTCAATTG
TCAACCAGACAGCGGTCATTGCAGCAGTGGTGCCTGCTGTGCATTGCAGC
TGGCGTGAAGACCAGCCTACGGTATTCCGCGACAGCAGTACAGTACCCAC
GACGGCCGGCACAAAAAATTAAGAGCCGGATTTCCAAGTCCCTGGCACCG
CGCGGCACCGCCGCACAGTAGTCCTCCGCTGTACCGTACCATACGGCACA
ACGGAAGCTGTGTCGTCGGAAGCATCTTGTTGACAGCCTATGCAAACGTA
TGTGCATGCGCCGTGGTTGGTTTTCTACAATAGCTTGTTTCCACGACCGC
CTGTGTTGTTGATATACAGCTATATCAAGACATCCCTCGGAGAGACAACT
GGCAGCAAAAACGATTTCCAAGCCGATCTACCATATGTACGGGACACAGC
AGTTTTTTCCAAGACACAATAATCATGCGCGTGAACACTGTAGCGCATGA
CAACAGCCGGCATTTAGACCAGATGCCCCCACCCTCGAGAAGCCCGTGCC
TTGTATGCACAGCAGTAGTTTGCCCCGAGACTAGGTTTTTTAGGTCCTCT
GCGGTGTAGCAGCGGCTATTTCTTTTTTGTGTAGGATTCTTCACGGAGGC
GCCATACTCCAAGATACTTTTCTTTCTGGTGCATACTGTATGGTCACCGT
TTTCAGTTGGTTGAAGTTCTTGTGTGTGTAGTTGTCAAGGCTAGACTGCC
CAAGGTGGAGTGTTCGGTATTTGTTTAGCAGGGTGACGAGCCAGAAGCCT
CCCTTCCGTCATGTTTCTCTGAACTGCAATAACAGCGGTTTGTTCTCTGT
GTACCAGCACTCGACATTCGATGGCGGCAACCTCTTTCACTAGCGCAGCG
GCGGCAACAGCAGTGCAAAGATGTCGCCACCCACCTCCAACAGTACCACC
ACCACCACCACCACCAATCACCACCACCAACACTGCTAACAAGAAAACAA
GAACAACAATGACACCCCTAAAACACCACGAACGAACTACATTTGCACAG
GTGCTCGGTGGGGAAGGCGGAGGAGCGGCAGCCTCCCGGCCTTTCGCCGT
GCCGCAGGCTGTACAGACCCCGGCCACCGTCAGGAAACCGCCGCCGCCGT
CCTCGCGCGCCGCCGGCCTCGATGGCCCCTCTCCCATGCCCTCCTGGGGG
GTGAACCTAAGGGATGCCTCCGCCGGGGAACCGCTGGAGGTGCGTGCGTT
GGCTGGAGGTCGGTAAAGTAAATATGTTTTTTTTTTTTTTTTTTGTTGAA
CGTGTACGGGCAAAAAAGACTGCCAGTTCGACATCATACCACAGCCGTCC
CTGTTTTTGACGAGGGGGTGACTTGTGCGGCAAACGGCGTAAGCTTGTCT
CTTTGATGTCAGTTGCGGCTGAAGGCGCTCTGGTTTCTGCCCGCCCTTCG
ATTGCTGGTGTTTGCAGTATGAACCCCGCTGTTCTCTTGTATCTCGTGTT
CATCAGCAGTTTGCTTCTTGCGTTGCTGTTCAGAAAGTTTACATGTTATC
ACAGAAAGACTTCAATACCCGTTCGAGATACAACCTCAGTCGAAAGGGAT
GTGTTCAAGTCTTTTCAGTGAGTGGAGGGAAACCGACTGGAAACTGGGCA
TGTTTTGAGTCTGTTTGAGCCTATATCGTTTGTTTTGCGTATCGAAGGAA
AACACTACAACGCTACAACGCCATGGGTCGTCCCGCGAATCGGAGTGCGG
TATACCTACCATCGTGTGCGTGCCGATGTCCCATTACACACTTCCGTCGT
CTGTAGATGCTATTTAGCTATTTAGATGATTACATTGCCGATGATCGTCG
TCATCACCGCGGTTCCTTGATTGCCTTCTTGTTTCTTTTTCCACCACCCC
ACCCCTTCCCTCCCCTCCCCTCCCCTCCCCTCCCCAGGCGGGAGACCACG
ACCCTAGCTCCTACTACCCATCCTTCCAGCTAGACTGCCTCCGTCAGCCC
TACGGTAGCGGCACCTCCGATGGAGCGGTCGAGTCTCCAGCTATGGCCTC
TCCGGCCGGCGGCGGTGGCGGCGGCGGCGCGGGCCCTTCCCCTACATCCA
CGGCAATGGACGACGACGACGATCAAAGCAGCGGCGGCGGCGGCGGCGGC
GGCGGCGGAGGCTCCCGACGCACGACCCGCGGCGGCGGGGTCTCGTTGCG
GTCCATGGGGGGAGGGGAGGAAGACGATGCGTTTGCGCCCCCGCCGTCCC
CGGCCAGGCTGGAGATGGTGGGCGGTGGTGGCAAGAGTACGAGGGGGTTG
GGGGGGATAGCCGCCGCTCTGGAACAAGCAAGAAATGTCGGGGGGGCGGG
AGCGGGGGCAGGTGTGCCGGAAACGCCTCTGAGAAGGCCGGGGAGCGGGG
CTGGGAGCAGAGCTTCTGAGCGAGGAGCCGCGGCGCGTGGCGGCGGCGAC
AGCAGCTGTTCTCCCGTGGGGGGGTACGCAGGGTTTGACAGGTGGGGGAC
GGGGTGGGGGGAGTGCCGGGGGTCTCGCGCCCGGGATGATATTTTTTGTG
TCTTTTGTGTTGGTCTACATTTGATGCGGTCCTGTCGGTGCTGCATGTTG
TTGGTTTCGGATGGGTTACTGGCTCGCCTGCTTGTTCCATGGCTCATGTC
TCAACAGTCCCCCCCCCCCCCCCATTCCTATACTGCTCGCTTTTGGAACT
TGGAGGACGCAGGTCTGTCGCCCGACATGTTTTTTTTGGGTCGGGGTTAT
TTAGTCCCACTTCTCCGCCGATTGACCNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNGTTTTTTTCCCGGGGGGGGTTCC
CGGGGTTTTACCATTTGGGAAACGGGGGGGGGGGACCCCGGGGTTTCCCC
CCCCGGGGAAAATTTTTTTGGGTTTTTTGGGGGGGGCCCACATTAAAGGG
GCCCCTGGGGGGCCCCCATTTTTTGGTTTTGGGGGGGTTTAGGGGTCCCC
CTTTTTTTCCCGGGGCAAATTTTAAAAAGCCCCCCCCCCCCCCCCTTTCT
TTAACTGCTGGTTTTGGAAACTGGGGGGACGCGGTTTTTTCCCCGAAAAT
TTTTTTTTGGGGGGGGGTTTATTAAGCCCCAATTTTTCGGCGGTTGGCCC
CGGGTTCCCAAAAAGTTTTCCGGGGGAAACCCCCCCCCCCCCCCCCCCGC
GCGCCCCGGCCCGCAATTTAAGCTCCCCAAGATATTAACCTCCACACGTA
GAATACGCATATCGTGTGTTGTAACTGCTGTTATTGTCCCCTTTGTTTGC
TCGTCCTCTCGTTTGTATGGCTGAACGCATCAAACTTCAGGTCGGCTGTT
CAGGGATCGCCGGTTAAGAGGAGGAGCGTAGGGCGGTGGCGTATGTCGGA
GGAGGGCAGGCGCGAGACGAGCGCAGAGCAGGGCCGAGCAGCCTGCGAGG
AGTCCCCGCTCCGCAGCAACAGGAACCCGTTCTCGCCGGACAGGGATGAA
GACGTTGCTCAGGTGTCTTGTGTTGTGTTGTTTTGCGCCCTTGTGTCGGA
GCTAGAGTTTACTGCTTTGTTGCCCTTGTGTTGCGTTGGTGTTGGTAGTG
CGAGCGGGGAGTTGTTCTGACCTCTGTGTACCCTGTGCGTCGTGAGCGCG
CGTTTGTATTCGTAGGGCTGTCACGTTTGTTCTAGTCTCATAGTTCGTGA
TGCTGATGAGAGACGTGTTTCGTTCTGTGTGGAACCCTGCCAAGCTGTCA
TGGTTGCTCCCCTTTTTTTTTAAGCGGTAGAGGTTGCTCCGTTCGGTAAC
CTGTCAGTAGGACGTGTTGCCATGCACTGAGAGTGCGTCACAAGACTATC
GCTAGTGTTGGTGTCGAAATCGACGCACTTGGGGTGTAACCAAGTGTAAC
GGCTACTTTCACACGGGCAGATACAGCACGATGTACGGCGTATTCCCTGC
CGCCGCCGCTTACGTTGTTCCTACGCACTGAACCGTCCTCCGCAACCTGC
GTCGGTGCGTTCATATTGTTTTGTGCAACCAACTGGCAGGGAGATGCGAT
GTCCATGCCCGCCCCCGCACCGCGCTCGCGGCTGTCTTGCGGGGGGCCCG
TGACTGGGGGCGCCGACGGATCTCCGATGGACACCGGAGATGTCGGAGAT
TTCGCGACAATGACGGCGGGGATGGGACGAGGAGGAGGCAAAGCAGACGA
GGGCAGGCAAGGGTCGAACTTTTTGGCGCAAGTTAAAACCCTCCCTTTTT
TCAGAGAACGGGTTTCTTAAAGCTGCATTACGTTAGTCCACGACGACGAG
AATGCAGTTATCGAATGATGCACGTTTTAGAGCTGTCAACGAGAGGATCC
CAGTGCCTCCATATTCGACATCTTGGCTGTTTTTCCTGCACTGTACTCAA
GCTTTGACAGTCGGTAACGGTGTGGTGTGGTATTTCATTTTATGCATCCT
GCCGCGGTTTGTAGGACTGTTTGTTTTTTTTTCAGCTGCGCCAGGGGTTT
GAATGGGGTTTGGTGGCGTTGTTGCCTCTACGGGGATACGGCTGTCTGCT
GTTTGAAGAACCAGTTCCGTCCTTCTGTCCCTTGGATCTATTCCCCTTTC
TCTCCTCCGTGTGCATGATGATACGGGTCGCAATACGGCAAGTCAACGAC
TAAAAGCAAATACACTTGTGATGGCATCAGCCACTGGTTGTATGCGCAAC
GCGTTTTTCTCAGGTTTCCTGTCCCCCACTAACGTCGCCAGACGCAGCAA
GAGAAGAGCACTAATGCAATACGTTACTCTTGATGCTAAGTCTGCGACCG
CCATGGAGTGCTCTTTTTTGTCCCTCCCCAGACACACGAAACAACATGCA
CGGAGTCAGCCCGCGCCGTCTCTAACGATTCCCCGCTTACTCTCGTCTTA
TTTCTATCCCCGCTGTGTGAAACAATCAGCTTCCTGCGGAGGGTAAGCGT
TGGCAGCACCTGCTCCTCCTCCTCCGTCCCCACCACCGCTGGCAAGAAAA
CAGTCCAGGACGTTACCAATCCCAGCCCCTGTGACGTGGCCGCCTTCGTG
CCGGTAACCCCATGCCGCGGCAAGAACAGCGCGGAGGCCATGAGGCTGGG
GGGGGACACCGCCCCAATGTCCCCGGTTTCTAGTGCCGGCGGAGGCGTGA
ATGTGTCTCTGAACGTCGGGAACGGGGAGAAGGTGGCGCGGGGCAGGTTC
GCTACCGATTTCGAGGTTAAGGAGATCATTGGCACGGGGGGCTTCGGGAC
AGTGTACAAGGTGAGCCCCCCTTGTTTGCTGTTTTTCGTGATGTGCATTC
ATGTGTAAGGTGCGTCTGCCCCTCTCCTTTTTTTTTGTGTAAAAGGTGTG
TCTTCTTCGTTCATCGTGTGCGTGTTCACGGGCGTCCTATCCCTTTTTTT
CTGTTTGTCTGGGTGGGCAAGGCGCGTCTCCTGCCGCTTGGTTTTGTCTG
TTGCCCATGTGCTAAATACATGTTTCGGGCTGGTGGTTGCTTGAAGTATG
CTAGCAGTCGAATATGTCTCCTATCATTAGGCCGGTGAAATCGCATGGCC
CAGGCGGAATATTCAGGGAATCTCATATCCTGAACAATATTGAGGCGCCC
TGAATAAGTGCTAGCCGGTAAGTCATCTCTCCCTTGGTATTCGCACTGTT
GCACAGGGGCCATCCTTTACCTTGTCGGTGTGTAGACGTCAAGAGGACCA
ACAGCTTTCCGTCATACAGAAGACGCGGCTTGCTCCTGTAAACCCAAGTA
CCTATTGCGGCCTTTCTGATTTTTTGTTGCTGCTGTTGGGGGGGTTGTGA
TCGAAAGGTGCGGAGTCGTGTGGACGGCTGCCTGTACGCGGTGAAGTGCA
GCAGGCGGCGTTTCAAGGGCGAGACGGACCGGCAAAACATGCTCATGGAG
GTGTACGCCCTCGCTGCCGTTTGCGACTCTGCCCAGGAGACGATCAACAT
CGTTCGCTACCACCAGGTGTGCATATGATGCAGCAGCAGCAGCAGCAGCA
GCGTGTTTGTGGTGGACATGTGTGTGCGTGTGTTTTGTTTTGTTAGCATC
GACTGCGCCAGCAAACCTGCAGAACATATGGACAATCGTCAGAGCTGCCA
CGAACGGAAAACACATGTAGAGGCCATTGGAACATCATCAGCAGCAGATG
TGTTAATCATGCATGTAGGTCTGGGACCCCGGGAGGGAAATCATCGGGGA
GAATTCGTGTGTGTGTCCGAGAGGCTCGTACACGGTGTGCATGCCACAGG
TTAGTCACGCTCGCTGTACGCCCCCATGGAGATGACGGAAGTCAGCGATT
TATGCCGTTCTTGTGTTGGGCTTCCTTTCCAATGGCGTAACCTGAGGAAT
CTCATACAGACGTGTTCTGAATCCTCGTTTCCGTATTTTCGTGTGTGCTT
TTCGCTGCCAGGCGTGGATCGAGGAGGAGCGTCTGTACATTCAGACCGAG
CTGTGCGAGACCTCGTTGGAGAAGCAGCTGGAGAGCGGGCACCGCCTAGA
GATATCGGGCGTCTACGCGTTTCTGAGGCAGACGCTGCTGGGGCTGGAGA
TTCTGCACCAGCACAAGCTCGTTCACCTCGACATCAAGGTACGCATCCCA
CCGACATCATGATACTTCATGAGTTGGTGTTTTTGTTGGTGGTTTCCCAG
CACGGAAAGGTGGTCCCTGGGTAGTGCCAACGGGTTGGGTCGGCCTTTAT
TCGAGTAAGATTTTAAACAACTTGAATTTCCATCTGTGTGTAGCGCGATT
TCGAAGGCCTTGTGCAGGGCGACGGGCCGTAACCATGCGGTTTTATTGGC
ATACAGGGACCGCTGTTACACCACGGTACTGCTTCGTTGTTTTGTTTAGG
ATTGTATGTATTAGTAGCATACAAATGTAATGTCCTTCAAAGGTCATTCA
CTGATCGGTTTGACCCTTCCGCTGTCGACATCGACGGCGTTTGCCCTTCT
GCTTGTATTCCGTGCTTCCACTTGACGGTTGGCGTGTGCAAAGCCGGGGA
ACATCTTCGTGAAGAACGGCCAGTACAAGCTGGGAGACTTCGGGCTGGTG
ACCCCTGTGCACGTTAGGTCCGGCACGGACGTCGTGGAGGGAGACTCGCG
GTACATGTCCAAGGAGCTCTTGAACGACGACCACTCAAACCTCACCAAGG
TATTTTTTGCTTGCAGCAGTACATATATAGTCCAATGTGACGTTGTCCTG
TGTGTCTTTTTTCTCTCGCACTTTTGTTGGCCGGCTCCTACTTGTGACAG
TTGATGTAGCAGGCCTGCCATTGGTACAGTGTGTGCAGGGCTGGCTTTAT
TTTCGGCTGATCCGAAATTCTATCATGATCCATGTGTGCTGTGTGCGGAG
CCCGCTATTCACCAGACTGTACGAGCGTTGTGCCGCCGTGCTGAGACCTT
CCGCCGCCGCCCGCCCGCCGCCTCCAGTGTGATGTGTTCTCGCTGGGTAT
CACCCTTTACGAGATAATCTCGGGCAGGCCTTTGCCGCCTAACGGAGAAG
AGTGGCACCGCCTTCGGTCCGGCAAGGCGGGCATGCCGATGGGGCTCCCG
GCGGAGCTCTCCAAGACCCTGCTTGAGATGATGGACGTAAGTTTGGTCTT
GTTTGTGGCGATACCGCATAGGCTCGTGCCACTCCAGCACTAGGCAGATT
CGGCTAGAACATGAGATTTCTATTTATCTTTTTGTGGCGATACCGCATGG
CTTTGGTATTTAGCGATGAAACGTCGTGCCACCCTTAGAACATGAGGTTG
TGTGGTGCTCATTGGAAGGGAAAAAGTCGTGTGTACGAAAATTCAGCTTG
ACGATCGACGAGGGAAAGGCTGAAGCCTTCTGCTGACAATCGTTAGGGGA
ATCCTCCTGTTGTGACGCCGGCCGGTGCGTGGAGAAAACTGTACCGGAAC
TTGTTCAAGACCAATGAAACGTCCAGAATACAGGGATGGGATGGCGTATC
CAGAATAAACAACGAAATAATCAAAGAGTTGTAGTACCCCCTACAAAGAA
CCGAAATCCTGTAAACTCTATCTTGGTTTCCTGAGAGGTGAAATTTGCCA
AGGTTATAAGCCAAAACACGAGAGCTTCCCATGTACTCCACACGCACACC
AAGGCGGTTACCCACACACACACCTCGAGTCATGAAGCACCCCCAAATTC
CCACCGTTCCCAACTCGTGCCTCCGCAGCCCGATCCAGCACGCCGGCCGT
CTGCTGCGGAGCTCCTACGGTACCCTTGCCTGCAGAGCGAGATGGAAAGA
CAGCTGAACGACCAGAAGTCGGAGCTCAGCAAGGAGAGGACGCGCAACTC
TGGGCTGTTGGAGGAGGTTTCGGCGCTGATCCAGAAGCAGAGCCACAGGA
GCGGTCGCCTCAGCCGGACGATTACCTGGGACAGTGAGTCAGGCCGTTTC
TGAATAGGCCCCGTGCGCGTTTCTCCATGATATCGGCATTGGTCTGCTGC
GTCTTTTATGCTTTACGCGTCTAGCACAGCAGTGCCCTTTTGTTGTCCTG
ATGGATGTGTGTTGGTTTCACGGGTTGTTCCTATTAAATTCAGCCTGGTT
CCCCTTGGTCCCTGGTGTCTACTTGTGAATGAAGCGGTATCTAAATGTTG
CGAGAATGGTCGGCATTCCCCACAGACGCTGCCACTCAGGAGCGTGAAAC
ACCTCGCCTCTCACCCCTCTGCCCCCCCCCCGGTTTTCGTTGTGTTTATT
CAGACTCGTATTTCGCGGCAAACGGTTCCAAGGGGAAATCACCCTCTGAC
AACCTGTCGTCGAAACCCTCCCTGGGCGGAACTCCCGATGCCGCCGCACG
TGGAGGAGGCGGAGCTGCGCGGTCCAACCTGTCCGCGTTCAATGCGTCGG
AACCGTCCGGTGTCTTCGGGGGCGGTGAGTCAGCTCCCGCTCTCTTCGGC
CCCTGGGTCCCGCGGCCTTCCATGGCGGTCGGATCGGCTCGCGGCGCAGC
AGCGGGAGCTGCCGAAGTCGGTCGTGGGGTGGTGGCGTTGTCCAGGGTGG
AGGAGGAAGGGTCCGACTCCCCGCCGGCGTCGGGGGACATGGCCGGGGGG
GCGAGTCTTCCGGCCTCATTTGAGCGTCTGCGGCAGGCGTAGGGCGGCGT
CCCAGCCGCTTTTCCATCCAAGTATATAGAACTGGGGTGGTGGATGGGCG
GGCCGGGGGTCTTTGATTTGGCGGTGGTTATAGGGTTAACGCGTCTGTGG
CGATCGCTTCCGGACAGCGGCGCTAGCGGCGCACACGGGTGTCCGCAGAA
CAGTTGTATTTTCGAGAGTAGAGTGCATGGGAGCGAGGTTTCGGGAGTTG
AAGGCAGGTGCTTGCGGAGAGAGAGGCAGACGTCTACAATAGTGATATTA
ATATCTTCATGTTTTGTATGTGGCAGGTGTTTTTTCATGGTCGAGAAACA
CGAGCATGCGTTGGTATCATATGTGGCATTGTATGGTGAAGGAAGGCCGT
ACGGCTCTTTTGGTTGGTTGTTTTTTGGTGTTGTTCGTGTGTTTGGTTCA
TGCAAAAGCCAGCCATAGCGGCAGCAACGCTATTGTAGCTATGACAGCTG
CGCTAGCTACCCCCGTGAGGGAGAATCAAAACTGCGGTGGGTGTCGAGCG
TTCTTACTGCTGTAGGGCGAGATGTTTGTGGTTCAGGTTCGGGTGGAGTA
AATGTAGCCCTCCATGAAAGGAAAAAAATAAAATAACAGGATGCAAGGGC
TGCTGCAAACAGGGGATGGGGAGGGTTGGAGGAAAAGCCTGCGAAACAAC
TACTTTACCAGGGTGGTGTTGGTGTTGAAGTCCATCCCCAACCCTGGTCT
GCAGGGGAGGATTGTCATGCAGGCGTGGGGGATTACACATGTATGATACC
GTATTTTAAAGTCATCTTGCCGAAAATGTTTTTTTTTTTGCTAATCAAGT
CCCATTACATCCATTGAACGAACGCACACATCTCACGATCACGAAAGTTA
ATGCGAGGGGCCGAAATCGCAGCAGGTACTTTGCACGGCGAAGTCAAGGG
AGTAATTTAGTTAACCACGCTGGTAGCGGTATCGTGGGAGTTGTGTGCCC
CCTTTTCTGGAGTTTGGTGCATGCGCGTTGTCCTGTTGTAAGCTGGGCTT
AGATTTCACAACTTTGTACTTGCTGGGAGGGGGGCTAGTCCACGAAGAAA
TATGTATGCGTACTACGTGTTATAGGCTACTAACAAATAGTATCGGGTTT
TAACCGTACGTGTGGGTGGCTCATTCGGCTGGAGTTCCAATGGTTTCCAT
GTCTGTCGCGGCGGTGTGATGGGAATGGGGGGAGGGTCTGGAATCGGTGC
TTGATGGTTTGTTGGGAAGTTATCTTTGCATGGTTTATTGAGTAATGCGG
TCGTAAACAGCAAAAGTCTAGCGGTCGTGTTGGCGAGAGAGTATTGTACT
GGAAAATAAGGGATTGATGATGCTTCCCCGTCCCCCTGCGGAGTAGTACC
ATACTTTTCGCTGGATGTATGGCGTACATGTACCACCTAAATAGTTGGAT
TTGCAATCGCATGTGGCGCATCTGCCACGCTGCCGCCGTAGTAGTCAGTC
AGTCGACGTGATTGGCGTCGTCGTCGTCTTTTTTCCGTGTATACTGTACT
TGGCCGGTTTGCTTGCTGTGGCGCGCGCAGCTGCTCTCCATGTCTCCACG
CTGCGTCACTCCGAGTCCATTTACCAACATTTTCATGTGCTCCGTGTGTT
GCGCACCGCACGAGCGCCGTTGATAGGTGCCCGCCCACGCAGCATATGCT
TGGCAACGATGATTTAACATCAGGCAGGTCGTTTGTGTGTTGGGGGCGTT
TGTTGCGAGTTTCTTGTTCGTCTGGCCTCCCTGTGACTTGTGAGGTCAAG
ATATACTTGTAGAAGGCAGATAGTGCAAGTCTAGCAGGCTGCCGTACCGC
GATCGCCGTGTTGGCCGCCCTCTGTGTATTTTGAGTGTCCGATGTCTCTC
GTTGTGTGATTGCATAGAGCGTCTTATGTTGTCGGTGGCTCCGTTGCTAA
TCGCTCTGGGTGTTTTCGAGCACCCGTCTTTATTTTCGCTCGAACAAATC
TGTATTTGATCGTCTTTTGCTTGAATCCTGGGACCTTCGCCCAACCAAGC
AGAGCACAAGTATCCGGTTGTGATCAAATCTCACTCGGGGAACAACTACA
TGTACATGTCTACGCCAGGTGGTGGATGAGATTAAGTGGGAAACGACTAA
TGGCCACGGCGAAACAGATGTCATGTTACTGCACGAGCATTCGTTTCTGG
TTCTTTCTATGAGCCGCGCGCGTATAGCTCGTCGTCAAGCATGCCGAGGG
GTCTTGTACCCCGTCGAAGCAACGCGTGAGCGCC
back to top

Coding sequence (CDS) from alignment at chr_00:10110697..10123130-

>Ec-00_006420.1 ID=Ec-00_006420.1|Name=Ec-00_006420.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=2793bp|location=Sequence derived from alignment at chr_00:10110697..10123130- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGATGCCGGAGCTGCGACCGAGACGGCGCGGGGGTCAAGCCCGACGAG
GTCGGCGCAAGAGGTGCTGCGCAGGATGAGCCTCAACAGCCCTCCCTCCC
GTACCGATAACCCTCGTCAAGTCAAGAGGGCAAAGGTGCTCGGTGGGGAA
GGCGGAGGAGCGGCAGCCTCCCGGCCTTTCGCCGTGCCGCAGGCTGTACA
GACCCCGGCCACCGTCAGGAAACCGCCGCCGCCGTCCTCGCGCGCCGCCG
GCCTCGATGGCCCCTCTCCCATGCCCTCCTGGGGGGTGAACCTAAGGGAT
GCCTCCGCCGGGGAACCGCTGGAGGCGGGAGACCACGACCCTAGCTCCTA
CTACCCATCCTTCCAGCTAGACTGCCTCCGTCAGCCCTACGGTAGCGGCA
CCTCCGATGGAGCGGTCGAGTCTCCAGCTATGGCCTCTCCGGCCGGCGGC
GGTGGCGGCGGCGGCGCGGGCCCTTCCCCTACATCCACGGCAATGGACGA
CGACGACGATCAAAGCAGCGGCGGCGGCGGCGGCGGCGGCGGCGGAGGCT
CCCGACGCACGACCCGCGGCGGCGGGGTCTCGTTGCGGTCCATGGGGGGA
GGGGAGGAAGACGATGCGTTTGCGCCCCCGCCGTCCCCGGCCAGGCTGGA
GATGGTGGGCGGTGGTGGCAAGAGTACGAGGGGGTTGGGGGGGATAGCCG
CCGCTCTGGAACAAGCAAGAAATGTCGGGGGGGCGGGAGCGGGGGCAGGT
GTGCCGGAAACGCCTCTGAGAAGGCCGGGGAGCGGGGCTGGGAGCAGAGC
TTCTGAGCGAGGAGCCGCGGCGCGTGGCGGCGGCGACAGCAGCTGTTCTC
CCGTGGGGGGGTACGCAGGGTTTGACAGGTCGGCTGTTCAGGGATCGCCG
GTTAAGAGGAGGAGCGTAGGGCGGTGGCGTATGTCGGAGGAGGGCAGGCG
CGAGACGAGCGCAGAGCAGGGCCGAGCAGCCTGCGAGGAGTCCCCGCTCC
GCAGCAACAGGAACCCGTTCTCGCCGGACAGGGATGAAGACGTTGCTCAG
GGAGATGCGATGTCCATGCCCGCCCCCGCACCGCGCTCGCGGCTGTCTTG
CGGGGGGCCCGTGACTGGGGGCGCCGACGGATCTCCGATGGACACCGGAG
ATGTCGGAGATTTCGCGACAATGACGGCGGGGATGGGACGAGGAGGAGGC
AAAGCAGACGAGGGCAGCTTCCTGCGGAGGGTAAGCGTTGGCAGCACCTG
CTCCTCCTCCTCCGTCCCCACCACCGCTGGCAAGAAAACAGTCCAGGACG
TTACCAATCCCAGCCCCTGTGACGTGGCCGCCTTCGTGCCGGTAACCCCA
TGCCGCGGCAAGAACAGCGCGGAGGCCATGAGGCTGGGGGGGGACACCGC
CCCAATGTCCCCGGTTTCTAGTGCCGGCGGAGGCGTGAATGTGTCTCTGA
ACGTCGGGAACGGGGAGAAGGTGGCGCGGGGCAGGTTCGCTACCGATTTC
GAGGTTAAGGAGATCATTGGCACGGGGGGCTTCGGGACAGTGTACAAGGT
GCGGAGTCGTGTGGACGGCTGCCTGTACGCGGTGAAGTGCAGCAGGCGGC
GTTTCAAGGGCGAGACGGACCGGCAAAACATGCTCATGGAGGTGTACGCC
CTCGCTGCCGTTTGCGACTCTGCCCAGGAGACGATCAACATCGTTCGCTA
CCACCAGGCGTGGATCGAGGAGGAGCGTCTGTACATTCAGACCGAGCTGT
GCGAGACCTCGTTGGAGAAGCAGCTGGAGAGCGGGCACCGCCTAGAGATA
TCGGGCGTCTACGCGTTTCTGAGGCAGACGCTGCTGGGGCTGGAGATTCT
GCACCAGCACAAGCTCGTTCACCTCGACATCAAGCCGGGGAACATCTTCG
TGAAGAACGGCCAGTACAAGCTGGGAGACTTCGGGCTGGTGACCCCTGTG
CACGTTAGGTCCGGCACGGACGTCGTGGAGGGAGACTCGCGGTACATGTC
CAAGGAGCTCTTGAACGACGACCACTCAAACCTCACCAAGTGTGATGTGT
TCTCGCTGGGTATCACCCTTTACGAGATAATCTCGGGCAGGCCTTTGCCG
CCTAACGGAGAAGAGTGGCACCGCCTTCGGTCCGGCAAGGCGGGCATGCC
GATGGGGCTCCCGGCGGAGCTCTCCAAGACCCTGCTTGAGATGATGGACC
CCGATCCAGCACGCCGGCCGTCTGCTGCGGAGCTCCTACGGTACCCTTGC
CTGCAGAGCGAGATGGAAAGACAGCTGAACGACCAGAAGTCGGAGCTCAG
CAAGGAGAGGACGCGCAACTCTGGGCTGTTGGAGGAGGTTTCGGCGCTGA
TCCAGAAGCAGAGCCACAGGAGCGGTCGCCTCAGCCGGACGATTACCTGG
GACAACTCGTATTTCGCGGCAAACGGTTCCAAGGGGAAATCACCCTCTGA
CAACCTGTCGTCGAAACCCTCCCTGGGCGGAACTCCCGATGCCGCCGCAC
GTGGAGGAGGCGGAGCTGCGCGGTCCAACCTGTCCGCGTTCAATGCGTCG
GAACCGTCCGGTGTCTTCGGGGGCGGTGAGTCAGCTCCCGCTCTCTTCGG
CCCCTGGGTCCCGCGGCCTTCCATGGCGGTCGGATCGGCTCGCGGCGCAG
CAGCGGGAGCTGCCGAAGTCGGTCGTGGGGTGGTGGCGTTGTCCAGGGTG
GAGGAGGAAGGGTCCGACTCCCCGCCGGCGTCGGGGGACATGGCCGGGGG
GGCGAGTCTTCCGGCCTCATTTGAGCGTCTGCGGCAGGCGTAG
back to top
Synonyms
The feature 'Ec-00_006420.1' has the following synonyms
Synonym
Esi0495_0011
Esi_0495_0011
wee 1