Ec-00_006400.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Ec-00_006400.1
Unique Name	Ec-00_006400.1
Type	mRNA
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	401

Homology

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BLAST of Ec-00_006400.1 vs. uniprot
Match: D7G342_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G342_ECTSI)

HSP 1 Score: 181 bits (459), Expect = 2.270e-50
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 2

Query:  992 VDVYVEFWECSSEFRSCSMDDDLAASCGDDDDGLDDGAFGDEDLSGTVATGYSRAVLALVLPVSFFVALPQYTEEFLPPVAIQVHRLHALT 1264
            VDVYVEFWECSSEFRSCSMDDDLAASCGDDDDGLDDGAFGDEDLSGTVATGYSRAVLALVLPVSFFVALPQYTEEFLPPVAIQVHRLHALT
Sbjct:   46 VDVYVEFWECSSEFRSCSMDDDLAASCGDDDDGLDDGAFGDEDLSGTVATGYSRAVLALVLPVSFFVALPQYTEEFLPPVAIQVHRLHALT 136

The following BLAST results are available for this feature:

BLAST of Ec-00_006400.1 vs. uniprot

BLAST of Ec-00_006400.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7G342_ECTSI	2.270e-50	100.00	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_00	contig	chr_00:10087540..10094405 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Properties


Property Name	Value
Length	2051
Hectar predicted targeting category	other localisation
Gene id	Ec-00_006400.1

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-00_006400	Ec-00_006400	Ectocarpus species7 Ec32 male_plus_femaleSDR	gene	chr_00 10087540..10094405 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_006400.1.1	Ec-00_006400.1.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 10087540..10087647 +
Ec-00_006400.1.2	Ec-00_006400.1.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 10092463..10094405 +

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_006400	5UTR:Ec-00_006400.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	five_prime_UTR	chr_00 10087540..10087604 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_006400.1	CDS:Ec-00_006400.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	CDS	chr_00 10087605..10087647 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_006400	3UTR:Ec-00_006400.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	three_prime_UTR	chr_00 10093623..10094405 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_006400.1	Ec-00_006400.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	polypeptide	chr_00 10087605..10093622 +

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at chr_00:10087540..10094405+
coding sequence from alignment at chr_00:10087540..10094405+

mRNA sequence

>Ec-00_006400.1 ID=Ec-00_006400.1|Name=Ec-00_006400.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=401bp
MAERWRGFGDHLPQRYFSCTRKSMRGQPAMATKGPLSRSSAGRTFLLLFA
LTTQVLLQHAGATTTSSSDCGLDDCLADDVCFACVTGAVAEDAVEEYTEC
LSTTESGTTDLCVVISAAACCQDAISDNGCFENDDFVSFHECALSIASLE
MDGQDECTALACSDTISSSSSSGSGEDTSSTTPAPAMTTPAPAAATSIST
SSPAEEVDTTSSPSITVDGTMAPTMSRYLSTGDVFTSDDPCTSVAERCND
DEDCSACLLAGVDLETEYTDCLTALAPNSYSGATESAVCDAFAATFCCND
LVSDTDCLAVDVYVEFWECSSEFRSCSMDDDLAASCGDDDDGLDDGAFGD
EDLSGTVATGYSRAVLALVLPVSFFVALPQYTEEFLPPVAIQVHRLHALT
*

spliced messenger RNA

>Ec-00_006400.1 ID=Ec-00_006400.1|Name=Ec-00_006400.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=2051bp|location=Sequence derived from alignment at chr_00:10087540..10094405+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
CCGCGGCTCCTTGATTGCTGGGTACTACTGCGGCGGCAGTGGTGCCCGCT
GCTGAGGGCAGGCGCATGGCGGAGCGCTGGAGGGGTTTCGGAGACCACCT
CCCCCAACGATATTTTTCTTGCACAAGGAAGAGCATGCGCGGGCAACCAG
CTATGGCAACCAAGGGGCCGCTGTCCCGCTCATCGGCCGGGAGGACGTTT
CTGCTTCTTTTCGCTCTCACAACACAAGTGCTACTGCAGCATGCTGGCGC
GACCACAACTTCTTCGTCGGATTGCGGTTTGGACGACTGCCTTGCCGATG
ACGTGTGCTTCGCGTGCGTGACGGGGGCGGTTGCTGAGGACGCTGTGGAA
GAATACACCGAGTGCCTGTCCACGACCGAGTCGGGCACGACAGACCTCTG
CGTGGTGATTTCGGCGGCCGCCTGCTGCCAAGATGCCATTTCCGACAACG
GCTGCTTCGAAAACGACGATTTCGTTTCGTTCCACGAATGTGCTCTTTCG
ATCGCCTCACTAGAGATGGACGGTCAGGACGAGTGCACAGCCCTTGCGTG
CAGTGACACTATCAGCAGCAGCAGCAGCAGCGGCAGCGGTGAGGACACGA
GCTCCACGACGCCCGCGCCCGCGATGACCACTCCAGCTCCTGCCGCCGCA
ACAAGCATATCGACCAGCTCACCCGCGGAGGAGGTGGACACGACATCATC
TCCTAGCATCACGGTGGACGGGACGATGGCTCCTACCATGTCGAGGTACC
TCAGCACAGGTGATGTCTTTACGAGTGACGATCCATGCACGAGCGTCGCG
GAACGATGCAACGACGACGAGGACTGCTCCGCGTGCCTTCTCGCGGGAGT
CGACCTCGAAACCGAGTACACGGATTGCCTCACCGCTCTGGCGCCCAACT
CTTATTCCGGTGCCACCGAAAGCGCCGTCTGTGACGCGTTCGCTGCAACC
TTTTGCTGCAACGACCTCGTGTCCGACACGGACTGCTTGGCAGTCGACGT
CTACGTGGAGTTCTGGGAGTGCTCGTCGGAGTTCAGGAGCTGCTCGATGG
ACGACGATCTAGCTGCATCATGCGGAGACGATGACGATGGCCTAGACGAT
GGCGCCTTCGGCGACGAGGACCTCAGCGGGACTGTTGCGACAGGGTACTC
GAGAGCCGTGCTCGCCCTCGTGCTGCCTGTCTCTTTCTTTGTGGCTTTGC
CGCAATATACGGAGGAATTCTTGCCTCCCGTCGCCATCCAGGTCCACCGC
TTGCACGCACTTACGTGATGCCGTAGGAGGCTGCTACTATCGGTTGCGCT
GCCGGGCTGCGCGACCGACTCAATTGCCCATCTTTTCTGTTGCTTTGGTC
CCAGGGTCGCCTAGAGGGGATTGGGGGGAGTTCGTTCGTAACAAAAGCCT
GGAGAGTGTTTCGTGACCAAAGTCGCGGGAGACAAGTAAGAGAGACGGGT
CGATCTGGTGTGGTTGGTATGTTTGTGTTGTGGTGGAGTTCTGGGAACAT
ATGTGTGATGCCGTTTGTGTCCGACCCCCCCCTTCGTGTTTGGTCTCCCA
CACTTTCCACAGTTTTTCCAAACCGCCCATGGGGCACCCATGGGTTGTCC
ATATGGGAAATGCCCACGGGCAAGCTCGTGGGTAGCCCATGGGCGGCCCA
TGGACCGTCAATGAGTGATCTTCGACCAGAACCAGTGTACTCCTAAACAA
CAGATTATCGGCGTTAGAAGGGGCGAGGAAACGAGGAATAACGCTAACGC
TAACCCTTACCCTAACCCCAAGACCACACGATACGTGCTAGGTTGGCGCT
GGGTGGCTAAGCTCTAGGTTGATGTGCCGATGGCAAAGTTCTAGGTTGAT
ACGCTGGTGGCGAAGTTCTAGGTTGAAGCCCACTTCGTGGGCAATCCATG
GGCTGCCGATGGGCCCACCCATGAGCAGCTCATGGGCAGTCCATCAAGTG
CCCATGGGCGGCCCATGGGCTGCCAATGGGTGCCCCATGGGCGGTTTAGC
AAAACTGCCGGTGGTGTGGGAGATTGTTCTTGCTGTACACTGTACGTGGA
C

protein sequence of Ec-00_006400.1

>Ec-00_006400.1 ID=Ec-00_006400.1|Name=Ec-00_006400.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=401bp
MAERWRGFGDHLPQRYFSCTRKSMRGQPAMATKGPLSRSSAGRTFLLLFA
LTTQVLLQHAGATTTSSSDCGLDDCLADDVCFACVTGAVAEDAVEEYTEC
LSTTESGTTDLCVVISAAACCQDAISDNGCFENDDFVSFHECALSIASLE
MDGQDECTALACSDTISSSSSSGSGEDTSSTTPAPAMTTPAPAAATSIST
SSPAEEVDTTSSPSITVDGTMAPTMSRYLSTGDVFTSDDPCTSVAERCND
DEDCSACLLAGVDLETEYTDCLTALAPNSYSGATESAVCDAFAATFCCND
LVSDTDCLAVDVYVEFWECSSEFRSCSMDDDLAASCGDDDDGLDDGAFGD
EDLSGTVATGYSRAVLALVLPVSFFVALPQYTEEFLPPVAIQVHRLHALT
*

mRNA from alignment at chr_00:10087540..10094405+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>Ec-00_006400.1 ID=Ec-00_006400.1|Name=Ec-00_006400.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=6866bp|location=Sequence derived from alignment at chr_00:10087540..10094405+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
CCGCGGCTCCTTGATTGCTGGGTACTACTGCGGCGGCAGTGGTGCCCGCT
GCTGAGGGCAGGCGCATGGCGGAGCGCTGGAGGGGTTTCGGAGACCACCT
CCCCCAACGTAAGGATTCGTTATTTCTACCAACTAAGACTAACGGGATAT
GATCGGGTCGAACGTGTCTGTTTGTGCATACAAACGTGTGTAGTCTATCG
CGTCATCAACAGCACCCTGAACAAATCGACTTCCTGCGTGCTTCCTGAAG
GCATCATGTTTTAATCGCGTCAGGACAGTTTTCGAGAAGGATCGATACCT
TTGCTCACGGCTGGGTTTGCAGAGTACAGCAGTATTTACACTATTTGCCC
TCGAAAATCTCCCATCCATGCAGTTGCCTCGTTGACAGTCCCGCGCGAAA
CGACTCCGAAATCGAAATGCATTATATTTATTCTTCTGAAGAGGATTATA
CAGCACGCGAACTCCTATCGCCCTTTCGACGATTGAGGCTCAAGCTCGTG
CGAAAACTCCTACTACTGAAGTTGCTGATCCATTTACATTGTAGTCTCAT
TCCTAGTCTCCTTCATGTATGTTCTCGAGGAGGCTCCAGCAGTATACTAG
TCTATGACCGTAAGCTTCGGATCGTTTTTTTTTCTGAAACCAACCCCGCT
GGGGGGAAATTACCGCGGGGGTTAGTGTTTGGGGTGTCGGCGCGTGTACT
ATGTTATCACGCTCGCGGGCTCTTGTCGAGAGCGTGTTGCACAAAGGAGT
GACGCAAGTTCCTTGATAATTAGAGAGAGTTTCACGAGTGACAGACGTGA
GCAAGAAGAGCTCTAGGCAAAGCCTGCTGCACCAAGTCTGTCTATCATAC
CCACATATATCTCATCTGCGTATCCCCCTCGGAGATCTCGGAGAAGATTA
TCCTGCCGAGTACACACACAAACGGTTAGTCTTTTTTTTTTCCAGCGCTA
CCCCGGGGGGAAGCCCCCCCTCGGGGGGTTGTGCAAAATAATGATGGTCC
ACACACCACACACACAGCGAGTGGTGGTGAAACTGAGATGGGTAAGGTTT
ACGCGTTCAACAAGCAGAGGGAGGAGGAACGTAAGAGCATCAAAGACGCG
AAGAGAAAAAAGACAGTAACAGGTACCATTGCCTAAGCTCATGCACAAGA
ATTCGCAGTTTGTCCGCAGGAACGAGCTATTTTTATGCTTCGGTTCTACC
TTGAGTTGTGAGATCCAAAAATGAATACGATTATTTTTCCCCTTGTGCGC
AAGGTTTCGTCAGAGTGCTGTAAATGGTATGTTTCAGCTGACTCAAGGGA
TGATAAATGCAAGAAATAGACAAAAAACGAAATAATTTCACCCATAAAAC
AACGGCGAGGGCCAAGTGACAAACGGTACACCTAAATCTCGCTCGAAGCG
CAGATGATCTGCAAGTGAATTTTCCGTCCCATATCATGCTTTTGTGCTCG
GTGAAATAGTCTACATCCCCCCCGGGGGACTCGTGGGAAATGGTACCCCG
GGGGGGAATTGACATACATACCCGGGGGGGGGGGGGGGTTAGTCGAAAAC
GATCTACCCCGGGGCTAAATCAACGAACTCATGCTTCCAGGCCAAAAAGG
TAATGGGGGGGGGGGACTCTAACCTGGGGGAAAAACTCATATCGTTCAAA
CATTCTTCCACAGAAAGAACTATGAGATGCCGCCTTCTGACATATTTCAT
AGTCCAACGTAGCATACTCGTCTGATACAGAAACCCACCCACAGAAGGGC
GGGCGCGTTGCAGTCCTGGAATGGCAGATTCATTCGTTGTTTGACCCGAG
AAGACCATCCCCCCCTCTTGCGAGGCTGGACTACATGTACATAAAAAAAT
GTACTTTAGGTCACCTGCATACAGTAGTCACGGCCACACACACACAGGCT
CACCACCTCCTACAAGAACAAGCTCAGAAATTCCACAAGAAAAAAAATGT
GAAACACCGTGAGACATGAGCCCAGCCGCCGATCGGTGTGTTTTTGTCAG
TTTTTCAGTCCATGCTGGAGTCATCAGGGAGGGAGAAAGTGCTTTCGAAT
CTTGCCCATCCCCACATTCATTCTTTATGAGTGGGTACATCACTCTAGAA
ACATTTTTCGTACACATTCGGCCCCAGGTCGCCCCGGTGGTCGTTTAGTA
GTTGACGGTGACGACGTACAGGAGATCTCGAGAGTTTGATTCGCTCCTGG
AGTGAAAATTTCACTCTATTCACTCTGCACTCTGGGATATACCAATAGCC
GCTATTATTGTGAAACACCTTGACTACAATCACACCCACTCGCTCTCAAA
CTTCAAATATCTTGCTACTTCGACTTCACGGTCGATGAGGGAATGGGATC
ACTGAATCCCTCTCGCGACACAAACTAAGGGAAGTCCCGCGGGAGGGAAG
GCGGGGCATCAATGCCAAATACAGAAGTGAAAAGAACAAATCAGCTCCGC
TGAAAAATACCTGGTGTAAACTTCTTCCTGTCTGTCTGTGTAGACCCGGG
CTGACACAATGCTGACACGTCAAACATTACATTTGCGGATACGTATACTG
TAGTACACTGCCACCATGAAAGAAAACAAAGCACGTACATGTGAAAATGT
GTGCAAATTCGTCATTCCCGAAAAATACTCGAACCCACAACTTTGTTGCT
ACTGTAGCAGAATCCTACAGTAGGTACTGTAGATAAATAAACCGCGCTGG
CGCTCCGTGCCCTACGTGGATGTGGCACACAGTCGAGAAAATGTGATCAT
TCCCGAACAAATGATCAGCAAGGAAAACTCCATGTCGTTTGTGTCTACTC
TTGTGCATACATCCGCCCAATTCATGCTGGGGAAGCGTCGTTGGGGGGAT
GGGAGGGATCGCTGAGTTGTATTGTACGGGGGGAGCGTTGTTCAAGAAAC
CTAAATTGCATCATTTGTGTATAGTCTAGCAAATAACGGCGTTGGATAAT
CCAGTGAATTTTGCCAGTTTATTTCCGTGGTCGGTCGTGGTTATGGTGAA
ACCTCCTCATTCTCTCAAGATCACTTGGGGGTATGTAGAGGAAAGTTTTT
GCTTTTGCGTACACATCAACATCCTGGCGCGTGCTCGGGCTCGGTCCATG
TGAGTACCGGCCAATCGGCCACATAAATGTACGTCCATGAGTTTGACGCG
CTCTAGATAACCATTTGTTTTCCGTGAGGCTAGAAACGGTTGTGTTTTGT
TCGGCACGCATTGAGGAAAAGTATTCATCCACATTTGTCCCAATGGCAGA
GGCGAAGTCAAGCGAAGAGCTCGTGAAACGCCCATGCGCATAAGTATAGC
TCTTTTCCTTGCTTGGTGTCCGCGTGTCCGCATCTCAAACACAGAATCGT
CGTACGGCCAAACGCAGCTACCTACATATGTGTACCTCGAACCTCCTGTA
GATCAACGTGCGAGTCGTGTTTCAGAAAGCGAGCGGAAACTCGGAAGCAC
AGAAGAAGGGACGCGTGGCATGTAAAATAACGCATGGCCACGCACAGAGG
GTCTGCCACACTTTCAACATTTTTCCCGAAACAACCCGTGGGACTGCCAT
GGGCAGCCCATGGGTCACCCATGACTCAACCTGCCCGCGGGCAGCCCTTG
GGCGACCCATGGGCGACCCATGGGAAGCCCATGGGCGGCCAATGAGAACC
CTTCAACCGAACCAGTGTACCCCTAAGCAATAGATTAACTGCTCTGGAAC
GGTCACTATAGCGGCTAGTAACGCTAGCACTAACGCTAACCCTATCCCCA
AGCCCACACGATACGTGCTAGGTTGGCGCTGGTGGCTAAGTTCTAGGTTG
ATGTAAAGGTGGCCAAGTTCTAGGTTTATATGCCGGTGGCTAAGCTCTAG
GTTGAAGTGCCCACGGTGGGTACTTCATGGGCCGCCCATGGGCCACTCAT
GGGCATCCCCATGGGTCACCGATGGGTGTCCTATGGGCGGTTTTTAACAA
AAGTGTCAGTAGTGTGGGAGATTTGGCAAAGAGGAAATATAATGTGGTGG
ATTCCTGCGGCTTTTCAGTCGCTCTCCGAATCTCGGACAGGTCGCCACAA
AGCGACTGCCAGATTTCAAGCCTCAAATCTCCTTCGACGAAACCTTAGGT
GTCACCCCCACAACCCCCCCGCTGGCTGACACTACAGGCCCAACCTACCT
TTCAGATGCAGATGTACCATTTTCCTCCACACTGTCCATGACGCCTGGTT
GGCGGTGGGCTTACAGTAGTACATCGATGCTCTGGGTGCCAGGGCAGAGT
CGCGTGTCCGGCATGCAAGGGTGGGCGCCGCCGTCGTGTCACGAACCAGC
AGCGGTTTCGGACACTGCAGTATTTGGTCTCATGTTCCGCCATATCCTCA
CAAACACCCCGTCGCCGCCGAAACACGAGGTTGCGCCAGTCGCCCAGTAT
TCCTCGGTCAAAGGCCCTCGATCGACGGCGTACATATCCGACACCAACAA
TATTGTTGGCGAGATATTTTCCGTGGGCCAGGGGATACCGGTGAAACACA
CAATTCAGATGCAGAGTACTCTCGGGTCGCCCACTTAAATATTGTCGACG
GGGGGCAGGGGCGGCGAACGGGTTCAATTTTCCTCCCTAGTTGCCCTCAT
CTTTGCCGTGACCGACGTCTCGGGTTCCAGCGGGAAATGTTTGATGTAAC
GCGCAACAGAAACAAGAGACCACTCCACGGGGTGGGGCAGAGGGGCCACC
TCGGCGTTGCTCTCTTCGCTACAGAATAATCGACCAGCCGCGGCGGATAC
CGTTTTGTTTGTGGAACGAATATATTGCGCTCCCCCCCAACCAGATTTTC
TCAACAGATGTATGTATGCGGCCGGCCGGCCGGTGCAACGGTGCATTCTT
GGGTTTCTTGGCTCATAGGGCGGTCTAACGCAGAACACACGTGCGCCGGC
TTTCCGCGTTGACCCTTCCACAGGATATTTTTCTTGCACAAGGAAGAGCA
TGCGCGGGCAACCAGCTATGGCAACCAAGGGGCCGCTGTCCCGCTCATCG
GCCGGGAGGACGTTTCTGCTTCTTTTCGCTCTCACAACACAAGTGCTACT
GCAGCATGCTGGCGCGACCACAACTTCTTCGTCGGATTGCGGTTTGGACG
ACTGCCTTGCCGATGACGTGTGCTTCGCGTGCGTGACGGGGGCGGTTGCT
GAGGACGCTGTGGAAGAATACACCGAGTGCCTGTCCACGACCGAGTCGGG
CACGACAGACCTCTGCGTGGTGATTTCGGCGGCCGCCTGCTGCCAAGATG
CCATTTCCGACAACGGCTGCTTCGAAAACGACGATTTCGTTTCGTTCCAC
GAATGTGCTCTTTCGATCGCCTCACTAGAGATGGACGGTCAGGACGAGTG
CACAGCCCTTGCGTGCAGTGACACTATCAGCAGCAGCAGCAGCAGCGGCA
GCGGTGAGGACACGAGCTCCACGACGCCCGCGCCCGCGATGACCACTCCA
GCTCCTGCCGCCGCAACAAGCATATCGACCAGCTCACCCGCGGAGGAGGT
GGACACGACATCATCTCCTAGCATCACGGTGGACGGGACGATGGCTCCTA
CCATGTCGAGGTACCTCAGCACAGGTGATGTCTTTACGAGTGACGATCCA
TGCACGAGCGTCGCGGAACGATGCAACGACGACGAGGACTGCTCCGCGTG
CCTTCTCGCGGGAGTCGACCTCGAAACCGAGTACACGGATTGCCTCACCG
CTCTGGCGCCCAACTCTTATTCCGGTGCCACCGAAAGCGCCGTCTGTGAC
GCGTTCGCTGCAACCTTTTGCTGCAACGACCTCGTGTCCGACACGGACTG
CTTGGCAGTCGACGTCTACGTGGAGTTCTGGGAGTGCTCGTCGGAGTTCA
GGAGCTGCTCGATGGACGACGATCTAGCTGCATCATGCGGAGACGATGAC
GATGGCCTAGACGATGGCGCCTTCGGCGACGAGGACCTCAGCGGGACTGT
TGCGACAGGGTACTCGAGAGCCGTGCTCGCCCTCGTGCTGCCTGTCTCTT
TCTTTGTGGCTTTGCCGCAATATACGGAGGAATTCTTGCCTCCCGTCGCC
ATCCAGGTCCACCGCTTGCACGCACTTACGTGATGCCGTAGGAGGCTGCT
ACTATCGGTTGCGCTGCCGGGCTGCGCGACCGACTCAATTGCCCATCTTT
TCTGTTGCTTTGGTCCCAGGGTCGCCTAGAGGGGATTGGGGGGAGTTCGT
TCGTAACAAAAGCCTGGAGAGTGTTTCGTGACCAAAGTCGCGGGAGACAA
GTAAGAGAGACGGGTCGATCTGGTGTGGTTGGTATGTTTGTGTTGTGGTG
GAGTTCTGGGAACATATGTGTGATGCCGTTTGTGTCCGACCCCCCCCTTC
GTGTTTGGTCTCCCACACTTTCCACAGTTTTTCCAAACCGCCCATGGGGC
ACCCATGGGTTGTCCATATGGGAAATGCCCACGGGCAAGCTCGTGGGTAG
CCCATGGGCGGCCCATGGACCGTCAATGAGTGATCTTCGACCAGAACCAG
TGTACTCCTAAACAACAGATTATCGGCGTTAGAAGGGGCGAGGAAACGAG
GAATAACGCTAACGCTAACCCTTACCCTAACCCCAAGACCACACGATACG
TGCTAGGTTGGCGCTGGGTGGCTAAGCTCTAGGTTGATGTGCCGATGGCA
AAGTTCTAGGTTGATACGCTGGTGGCGAAGTTCTAGGTTGAAGCCCACTT
CGTGGGCAATCCATGGGCTGCCGATGGGCCCACCCATGAGCAGCTCATGG
GCAGTCCATCAAGTGCCCATGGGCGGCCCATGGGCTGCCAATGGGTGCCC
CATGGGCGGTTTAGCAAAACTGCCGGTGGTGTGGGAGATTGTTCTTGCTG
TACACTGTACGTGGAC

Coding sequence (CDS) from alignment at chr_00:10087540..10094405+

>Ec-00_006400.1 ID=Ec-00_006400.1|Name=Ec-00_006400.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1203bp|location=Sequence derived from alignment at chr_00:10087540..10094405+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGCGGAGCGCTGGAGGGGTTTCGGAGACCACCTCCCCCAACGATATTT
TTCTTGCACAAGGAAGAGCATGCGCGGGCAACCAGCTATGGCAACCAAGG
GGCCGCTGTCCCGCTCATCGGCCGGGAGGACGTTTCTGCTTCTTTTCGCT
CTCACAACACAAGTGCTACTGCAGCATGCTGGCGCGACCACAACTTCTTC
GTCGGATTGCGGTTTGGACGACTGCCTTGCCGATGACGTGTGCTTCGCGT
GCGTGACGGGGGCGGTTGCTGAGGACGCTGTGGAAGAATACACCGAGTGC
CTGTCCACGACCGAGTCGGGCACGACAGACCTCTGCGTGGTGATTTCGGC
GGCCGCCTGCTGCCAAGATGCCATTTCCGACAACGGCTGCTTCGAAAACG
ACGATTTCGTTTCGTTCCACGAATGTGCTCTTTCGATCGCCTCACTAGAG
ATGGACGGTCAGGACGAGTGCACAGCCCTTGCGTGCAGTGACACTATCAG
CAGCAGCAGCAGCAGCGGCAGCGGTGAGGACACGAGCTCCACGACGCCCG
CGCCCGCGATGACCACTCCAGCTCCTGCCGCCGCAACAAGCATATCGACC
AGCTCACCCGCGGAGGAGGTGGACACGACATCATCTCCTAGCATCACGGT
GGACGGGACGATGGCTCCTACCATGTCGAGGTACCTCAGCACAGGTGATG
TCTTTACGAGTGACGATCCATGCACGAGCGTCGCGGAACGATGCAACGAC
GACGAGGACTGCTCCGCGTGCCTTCTCGCGGGAGTCGACCTCGAAACCGA
GTACACGGATTGCCTCACCGCTCTGGCGCCCAACTCTTATTCCGGTGCCA
CCGAAAGCGCCGTCTGTGACGCGTTCGCTGCAACCTTTTGCTGCAACGAC
CTCGTGTCCGACACGGACTGCTTGGCAGTCGACGTCTACGTGGAGTTCTG
GGAGTGCTCGTCGGAGTTCAGGAGCTGCTCGATGGACGACGATCTAGCTG
CATCATGCGGAGACGATGACGATGGCCTAGACGATGGCGCCTTCGGCGAC
GAGGACCTCAGCGGGACTGTTGCGACAGGGTACTCGAGAGCCGTGCTCGC
CCTCGTGCTGCCTGTCTCTTTCTTTGTGGCTTTGCCGCAATATACGGAGG
AATTCTTGCCTCCCGTCGCCATCCAGGTCCACCGCTTGCACGCACTTACG
TGA

Synonyms

The feature 'Ec-00_006400.1' has the following synonyms


Synonym
Esi495_0015
Esi_495_0015