Ec-00_006370.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_006370.1
Unique NameEc-00_006370.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length509
Homology
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BLAST of Ec-00_006370.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI)

HSP 1 Score: 977 bits (2525), Expect = 0.000e+0
Identity = 508/508 (100.00%), Postives = 508/508 (100.00%), Query Frame = 3 
Query:  522 MELRRSAALALVGLLAATSTXXXXXXXXXXXXXXXXXXXSDIAVSIRYAGTTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDNATENLMQGNTGLDDGEFELKVDNDACFDGEADSGYEPVC 2045
            MELRRSAALALVGLLAATSTXXXXXXXXXXXXXXXXXXXSDIAVSIRYAGTTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDNATENLMQGNTGLDDGEFELKVDNDACFDGEADSGYEPVC
Sbjct:    1 MELRRSAALALVGLLAATSTXXXXXXXXXXXXXXXXXXXSDIAVSIRYAGTTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDNATENLMQGNTGLDDGEFELKVDNDACFDGEADSGYEPVC 508
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BLAST of Ec-00_006370.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI)

HSP 1 Score: 883 bits (2282), Expect = 3.300e-311
Identity = 439/513 (85.58%), Postives = 468/513 (91.23%), Query Frame = 3 
Query:  522 MELRRSAA-----LALVGLLAATSTXXXXXXXXXXXXXXXXXXXSDIAVSIRYAGTTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDNATENLMQGNTGLDDGEFELKVDNDACFDGEADSGYEPVC 2045
            ME RR +A     LAL+GLLA+T+                    SDI VSIRYAGTT RLYLESAD G TRGGC TLGQIWESRAGK PLYAVDPDSG+VS + TGTWLLTEELYVEDGITLKVYG++ GGDADELRLLST+ET+INLRAHGGSLDFV TKVFSWDTSTNSPDEDETDGRSYISA+SEI+TDEDETCEGNAKNTMGEARMDIE+SEIGYLG+ DSESYGLTWKVRGFC+DKSNPE+FDDVNVYGN+YDSDIHH+ FGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVR SVGCADNVFS N ISNN++YNAY+YLG+DEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFD+A  ++MQGNTGLD+G+FELKV ND+CFDGE+DSGYEPVC
Sbjct:    1 MEFRRKSATSSFGLALLGLLASTTPAAAADTASPNDPISKPDCDSDIEVSIRYAGTTKRLYLESAD-GETRGGCATLGQIWESRAGKAPLYAVDPDSGDVSETETGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSETYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGNTGLDEGDFELKVTNDSCFDGESDSGYEPVC 512
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BLAST of Ec-00_006370.1 vs. uniprot
Match: D7FXE5_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE5_ECTSI)

HSP 1 Score: 760 bits (1963), Expect = 8.320e-265
Identity = 399/403 (99.01%), Postives = 401/403 (99.50%), Query Frame = 3 
Query:  522 MELRRSAALALVGLLAATSTXXXXXXXXXXXXXXXXXXXSDIAVSIRYAGTTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAE 1730
            MELRRSAALALVGLLAATSTXXXXXXXXXXXXXXXXXXX DIAVSIRYA +TARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITL+VYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAE
Sbjct:    1 MELRRSAALALVGLLAATSTXXXXXXXXXXXXXXXXXXXXDIAVSIRYAESTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLEVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAE 403
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BLAST of Ec-00_006370.1 vs. uniprot
Match: Q7XAJ8_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ8_9PHAE)

HSP 1 Score: 712 bits (1837), Expect = 1.090e-244
Identity = 349/468 (74.57%), Postives = 401/468 (85.68%), Query Frame = 3 
Query:  639 SDIAVSIRYAGTTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDNATENLMQGNTGLDDGEFELKVDNDACFDGEADSGYEPV 2042
            S IAVS+RY   +ARLY+ESA NG TRGGCVTL QIWE +    PLYAVDP SG+VS SATGTWLLTEE+YVEDGITL+V+G  AGGDADELRLLST++TFI+LRA+GGSLDF+STKVF+WDTS N+PD+DE+DGRSYISA+SE+ITD+ +TC G AKN MGEARMDIE+SE+ YLGY  +E+YGLTWKVRGFC DK NPE+FDDVNVYGN+YDSDIHH NFG+YTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEV+NNGYHGIIASKRCNGVSIQGNEVYGG+  SAGIFLHRSSD+ IVKGNYVHDNGDAGLAMLESFNADVS+NTFENNKYGVR SVGC  N+FS N I+ +AE+N +SYLG D+P+VV SGRSQ+NVF +N+  G  E+I +KEADGTQF+DN F+    D   +RF +AT+ LM GNTGL D    LKVD  A FD  +D G+EP+
Sbjct:   12 SSIAVSVRYNAESARLYIESA-NGRTRGGCVTLEQIWEQQVDGSPLYAVDPKSGDVSRSATGTWLLTEEMYVEDGITLQVHGISAGGDADELRLLSTSDTFIHLRAYGGSLDFLSTKVFAWDTSKNAPDQDESDGRSYISAVSEVITDDRQTCNGRAKNNMGEARMDIENSEMAYLGYHGTETYGLTWKVRGFCVDKGNPELFDDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVWNNGYHGIIASKRCNGVSIQGNEVYGGSSGSAGIFLHRSSDNGIVKGNYVHDNGDAGLAMLESFNADVSDNTFENNKYGVRLSVGCGRNIFSKNVITGSAEFNTFSYLGADKPEVVDSGRSQDNVFMENNIIGGVESILLKEADGTQFIDNTFK----DAAAIRFVDATKTLMSGNTGLADST--LKVDRGATFDESSDHGFEPI 472
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BLAST of Ec-00_006370.1 vs. uniprot
Match: Q7XAJ7_9PHAE (Mannuronan C-5-epimerase n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ7_9PHAE)

HSP 1 Score: 669 bits (1727), Expect = 9.700e-228
Identity = 333/466 (71.46%), Postives = 381/466 (81.76%), Query Frame = 3 
Query:  645 IAVSIRYAGTTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDNATENLMQGNTGLDDGEFELKVDNDACFDGEADSGYEPV 2042
            IAVSIRY+    RLYLESAD+  TRGGCVTL QIWE + G+ PLYAVD  SG++S SATGTWLLTEEL+VEDGITLKV+G+ AGGDADELRLLST++TFINLRAHGGSLDF+STKVF+WDTS N PD DE DGRSY+SA+SE+ITD+ +TC G AKN MGEARMDIE SE+GYLGY  SESYGLTWKVRGFC DKSN ++F+DVNVYGN+YDSDIHH NFG+YTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVY+NGYHGIIASKRCNGVSIQGNEVYGGA +SAGIFLHR                DAGLAM+ESFNADVS+N FENNKYG+RFSVG   NVF NN IS +  Y+ YSYLG+D PDVV SGRSQ+NVF +N+  G  E+IK+ +ADGTQF+DN FE    D   +RF++A + LM GN GL+    +LKV N A FD  +D G+EP+
Sbjct:   40 IAVSIRYSSVYERLYLESADS-KTRGGCVTLEQIWEHQRGEAPLYAVDSKSGDISDSATGTWLLTEELFVEDGITLKVHGTSAGGDADELRLLSTSDTFINLRAHGGSLDFLSTKVFAWDTSINGPDRDEEDGRSYVSAVSEVITDDSQTCNGRAKNNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHDLFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYDNGYHGIIASKRCNGVSIQGNEVYGGATSSAGIFLHRXXXXXXXXXXXXXXXXDAGLAMMESFNADVSDNIFENNKYGIRFSVGSGRNVFFNNVISGSTRYSTYSYLGSDAPDVVDSGRSQDNVFQENNIIGGVESIKLLDADGTQFIDNTFE----DATTIRFNDAKKTLMSGNIGLN--MSKLKVVNGASFDASSDYGFEPI 498
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BLAST of Ec-00_006370.1 vs. uniprot
Match: A8CEP1_SACJA (Mannuronan C-5 epimerase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A8CEP1_SACJA)

HSP 1 Score: 622 bits (1604), Expect = 2.690e-209
Identity = 313/469 (66.74%), Postives = 362/469 (77.19%), Query Frame = 3 
Query:  639 SDIAVSIRYAGTTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDNATENLMQGNTGLDDGEFELKVDNDACFDGEADSGYEPVC 2045
            S   VSIRY+ T+ RLYLESAD G TRGGCVTL  IW    G  PLYAV P SG+VS+S TGTWLLTE LYVEDGITL+V+G  AGG ADELRLLST++ FINLRAHGGSLDFVSTKVF+WDTS N    D++ GRSYISA+SE+ITD  + C+G AK  MGEARMDIE SE+ YLGY+ SESYGLTWKVRG C D SN EVFD VNVYGN+YDSDIHH  FG+YTYGH+QGDWRRNKMH N+ YGFDPHDDSDFLTIHDNEVYNNG HGIIASKRCNG          GA  S GIFLHRSSDDAIVK NYVHDNGDAG+A++E+FNADVS N FE+NKYG+R SVGCADNVFS N I+ +++YN Y+Y G+D P VV SGRSQ+        SG +ET+K+  ADGT+F+DN F+        +RF++    LM GN+GL  G   LKV + +CFD ++DS Y+PVC
Sbjct:   38 SSTKVSIRYSKTSKRLYLESAD-GNTRGGCVTLEDIWRDLDGGAPLYAVKPSSGDVSSSITGTWLLTESLYVEDGITLQVHGKSAGGKADELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNKVRTDDSKGRSYISAVSEVITDSKQKCDGRAKKNMGEARMDIEDSEMAYLGYFGSESYGLTWKVRGLCRDLSNLEVFDAVNVYGNIYDSDIHHNYFGVYTYGHEQGDWRRNKMHHNTEYGFDPHDDSDFLTIHDNEVYNNGNHGIIASKRCNGXXXXXXXXXXGAAKSVGIFLHRSSDDAIVKDNYVHDNGDAGMALMETFNADVSNNKFEDNKYGIRMSVGCADNVFSKNDITGSSKYNVYTYQGSDAPWVVDSGRSQDXXXXXXXXSGGQETVKLTMADGTEFIDNTFK----SAKTIRFEDCQGTLMSGNSGL--GGASLKVTDGSCFDKKSDSAYKPVC 499
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BLAST of Ec-00_006370.1 vs. uniprot
Match: D8LD45_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD45_ECTSI)

HSP 1 Score: 609 bits (1571), Expect = 6.340e-203
Identity = 310/468 (66.24%), Postives = 367/468 (78.42%), Query Frame = 3 
Query:  648 AVSIRYAGTTARLYLESADNGTTRGGCVTLGQIWESRAG------KGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLST-------NETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVF-EVGDADGLVVRFDNATENLMQGNTGLDDGEFELKVDNDACF 2009
            AVSIRY+ TT RLYLE+   G  RGGCVT+ QIWE+R G      K PLYAVDP SG  S   TGTWLL E+LYVEDGITLKV+G+ +GG ADELRL ST       N T+INLRAHGGSLDF  TKVF WDT+ NS D DETDGRSYISA+SEI+ D  +TCEGNAKNTMGEARMDI +SE+GY+G+ DSESYGLTWKVRGFC+DKSNPEVFD VNVYGN+YDS++HHMNF +YTYGHQQGDWRRN +H NSGYG+DPHDDSDFLTIHDN VY+N +HGIIASKRCN VSIQGN VYGG +TSAGIFLHRSSD A+VK N+ + NGDAG+AMLES NA++S N FE NKYG+R SVGC DN  SNNT++N ++Y  Y+Y G+D  +V  +GRSQ+N+F  N+  G  + IK+KE+DGT+  +NVF E G     +V F N TEN++ GN GL+D   E+++   ACF
Sbjct:  120 AVSIRYSATTGRLYLEAGVEGE-RGGCVTVEQIWEARGGGTTTGAKAPLYAVDPVSGEYSDVITGTWLLEEDLYVEDGITLKVWGNGSGGYADELRLKSTPPTEDGGNGTYINLRAHGGSLDFEHTKVFGWDTTNNSYDMDETDGRSYISAVSEIVLDPTQTCEGNAKNTMGEARMDIVNSEMGYMGFHDSESYGLTWKVRGFCKDKSNPEVFDQVNVYGNIYDSELHHMNFAVYTYGHQQGDWRRNTVHSNSGYGYDPHDDSDFLTIHDNVVYDNNWHGIIASKRCNNVSIQGNIVYGGNDTSAGIFLHRSSDYAVVKDNHCYGNGDAGMAMLESSNAEISGNIFEGNKYGIRMSVGCRDNFVSNNTMTNTSQYAIYTYQGSDPAEVQPTGRSQDNIFDSNTVVGGPQAIKLKESDGTRITNNVFYEPG-----LVEFSNTTENVVTGNVGLEDA-TEVELVEPACF 580
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BLAST of Ec-00_006370.1 vs. uniprot
Match: Q7XAK2_9PHAE (Mannuronan C-5-epimerase n=2 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAK2_9PHAE)

HSP 1 Score: 597 bits (1540), Expect = 1.120e-199
Identity = 304/469 (64.82%), Postives = 358/469 (76.33%), Query Frame = 3 
Query:  639 SDIAVSIRYAGTTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDNATENLMQGNTGLDDGEFELKVDNDACFDGEADSGYEPVC 2045
            S   VSIRY+ ++ RLYLESAD G TRGGCVTL +IW+   G  PLYAV P SG+VS+SATGTWLLTE+LYVEDGITL+V+G+ AGG+A+ELRLLST++ FINLRAHGGSLDFVSTKVF+WDTS N    D +  RSYISA+SEIITD  E C+G AK TMGEARMDIE SE+ YLGY  SESYGLTWKVRGFC+D SNPEVFD+VNVYGN+YDSDIHH +FG+YTYGH+QGDWRRNKMH N  YGFDPHDDSDFLTIHDN+V                          G+  S GIFLHRSSDDAIVK N    NGDAG+A++ESFNADVS N FE+NKYGVR SVGCADNVFS N IS++++YN Y+Y G+D+P VV SGRSQ+N+FS N+ +G +E+IK+  ADGT+F+DN F+         RF++A   LM GNTGL  G   LKV   ACFD ++DS Y+PVC
Sbjct:   41 SSTKVSIRYSASSKRLYLESAD-GKTRGGCVTLEEIWKDLDGSAPLYAVKPSSGDVSSSATGTWLLTEDLYVEDGITLQVHGTSAGGNANELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNKVRTDGSKARSYISAVSEIITDSKEKCDGKAKKTMGEARMDIEDSEMAYLGYQGSESYGLTWKVRGFCKDGSNPEVFDEVNVYGNIYDSDIHHNHFGVYTYGHEQGDWRRNKMHHNREYGFDPHDDSDFLTIHDNKVXXXXXXXXXXXXXXXXXXXXXXXXXXGSSKSVGIFLHRSSDDAIVKDNXXXXNGDAGMALMESFNADVSNNKFEDNKYGVRLSVGCADNVFSKNVISDSSKYNVYTYEGSDDPWVVDSGRSQDNIFSDNTITGGDESIKLTMADGTEFIDNTFKRA----KTARFEDAETTLMSGNTGL--GSATLKVSKGACFDKKSDSDYKPVC 502
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BLAST of Ec-00_006370.1 vs. uniprot
Match: A0A6H5JU98_9PHAE (MEP5a protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU98_9PHAE)

HSP 1 Score: 509 bits (1311), Expect = 4.990e-168
Identity = 256/313 (81.79%), Postives = 270/313 (86.26%), Query Frame = 3 
Query:  522 MELRRSAA----LALVGLLAATSTXXXXXXXXXXXXXXXXXXXSDIAVSIRYAGTTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHG 1448
            ME RRSA     LAL+GLLAAT                     SDIAVSIRYA +T RLYLESAD G TRGGCVTLGQIWE+RAGK PLYAVDP+SGN S + TGTWLLTEELYVEDGITLKVYG+  GGDADELRLLST +T+INLRAHGGSLDFV TKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIE+SEIGYLG+ DSESYGLTWKVRGFC+DKSNP +FD+VNVYGN+YDSDIHHM FGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNG HG
Sbjct:    1 MEFRRSATSSFCLALLGLLAATMRAAAADTASPNDPISKPDCDSDIAVSIRYASSTKRLYLESAD-GETRGGCVTLGQIWENRAGKAPLYAVDPESGNESENETGTWLLTEELYVEDGITLKVYGTGEGGDADELRLLSTTDTYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPGIFDEVNVYGNMYDSDIHHMRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGNHG 312
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BLAST of Ec-00_006370.1 vs. uniprot
Match: Q7XAJ9_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ9_9PHAE)

HSP 1 Score: 457 bits (1175), Expect = 3.800e-148
Identity = 223/326 (68.40%), Postives = 258/326 (79.14%), Query Frame = 3 
Query: 1068 EIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDNATENLMQGNTGLDDGEFELKVDNDACFDGEADSGYEPVC 2045
            EIITD  E C G AK TMGEARMDIE SE+ YLGY  SESYGLTWKVRGFC+D SNPEVFD+VNVYGN+YDSDIHH +FG+YTYGH+QGDWRRNKMH N  YGFDPHDDSDFLTIHDNEVYNNG HGIIASKRCNG          G+  S GIFLHRSSDDAIVK NY  DNGDAG+A++ESFNADVS N FE+NKYGVR SVGCADNVFS N IS+++EYN Y+Y G+D+P VV SGRSQ+N+FS N+ +G +E+IK+  ADGT+F+DN F+        VRF++A + +M GNTGL  G   LKV   ACFD ++DS Y+PVC
Sbjct:    6 EIITDSKEKCNGKAKKTMGEARMDIEDSEMAYLGYQGSESYGLTWKVRGFCKDGSNPEVFDEVNVYGNIYDSDIHHNHFGVYTYGHEQGDWRRNKMHHNREYGFDPHDDSDFLTIHDNEVYNNGNHGIIASKRCNGXXXXXXXXXXGSSKSVGIFLHRSSDDAIVKDNYXXDNGDAGMALMESFNADVSNNKFEDNKYGVRMSVGCADNVFSKNVISDSSEYNVYTYEGSDDPWVVDSGRSQDNIFSDNTITGGDESIKLTMADGTEFIDNTFK----SAKTVRFEDAQDTIMSGNTGL--GSATLKVSKGACFDKKSDSDYKPVC 325
The following BLAST results are available for this feature:
BLAST of Ec-00_006370.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G339_ECTSI0.000e+0100.00Mannuronan C-5-epimerase n=2 Tax=Ectocarpus silicu... [more]
D7FXE4_ECTSI3.300e-31185.58Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7FXE5_ECTSI8.320e-26599.01Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
Q7XAJ8_9PHAE1.090e-24474.57Mannuronan C-5-epimerase (Fragment) n=1 Tax=Lamina... [more]
Q7XAJ7_9PHAE9.700e-22871.46Mannuronan C-5-epimerase n=1 Tax=Laminaria digitat... [more]
A8CEP1_SACJA2.690e-20966.74Mannuronan C-5 epimerase n=1 Tax=Saccharina japoni... [more]
D8LD45_ECTSI6.340e-20366.24Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
Q7XAK2_9PHAE1.120e-19964.82Mannuronan C-5-epimerase n=2 Tax=Laminaria digitat... [more]
A0A6H5JU98_9PHAE4.990e-16881.79MEP5a protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
Q7XAJ9_9PHAE3.800e-14868.40Mannuronan C-5-epimerase (Fragment) n=1 Tax=Lamina... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:10055202..10061617 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score397.9
Seed ortholog evalue7.1e-108
Seed eggNOG ortholog2880.D8LC73
Length3547
KEGG koko:K11244
KEGG Pathwayko04011,ko04139,map04011,map04139
Hectar predicted targeting categorysignal peptide
Gene idEc-00_006370.1
EggNOG free text desc.protein xylosyltransferase activity
EggNOG OGsKOG4157@1,KOG4157@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_006370Ec-00_006370Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 10055202..10070346 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_006370.1Ec-00_006370.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 10056247..10060120 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_006370.1.1Ec-00_006370.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 10055202..10055606 +
Ec-00_006370.1.2Ec-00_006370.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 10056129..10056600 +
Ec-00_006370.1.3Ec-00_006370.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 10057002..10057115 +
Ec-00_006370.1.4Ec-00_006370.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 10057446..10057661 +
Ec-00_006370.1.5Ec-00_006370.1.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 10057946..10058060 +
Ec-00_006370.1.6Ec-00_006370.1.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 10058275..10058328 +
Ec-00_006370.1.7Ec-00_006370.1.7Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 10058588..10058659 +
Ec-00_006370.1.8Ec-00_006370.1.8Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 10058945..10059064 +
Ec-00_006370.1.9Ec-00_006370.1.9Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 10059264..10059426 +
Ec-00_006370.1.10Ec-00_006370.1.10Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 10059802..10061617 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0063705UTR:Ec-00_006370.1Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_00 10055202..10055606 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_006370.1CDS:Ec-00_006370.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 10056247..10056600 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0063703UTR:Ec-00_006370.1Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_00 10060121..10061617 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_006370.1 ID=Ec-00_006370.1|Name=Ec-00_006370.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=509bp
MELRRSAALALVGLLAATSTAAAADTPSPNEPIPKPDCDSDIAVSIRYAG
TTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSAT
GTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSL
DFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTM
GEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGN
VYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDN
EVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGN
YVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISN
NAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQF
LDNVFEVGDADGLVVRFDNATENLMQGNTGLDDGEFELKVDNDACFDGEA
DSGYEPVC*
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spliced messenger RNA

>Ec-00_006370.1 ID=Ec-00_006370.1|Name=Ec-00_006370.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=3547bp|location=Sequence derived from alignment at chr_00:10055202..10061617+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
CAACGCGTATGCCGGGCTATAGAGGTGGTCCATCTGGAGAGGAAGGCGGT
GACGGTACAGTGCTGGAGAAACGTGGTCAGGCTGGAGGCTGACTGGCGGC
GGATGTGGTGCATGTGTCCACGGGTGGATGTCTGGATCCTTCCCAGAAAA
CGTTTTTGGACTTGTGCGCAACGGCCCGCACGCTTTTCCCATCTTCCCAC
CGCATCAAAATGCGAGACCAAAACTTCTGGGAAACGTCGGCACTGGGAGA
TTTAAGGAATAGTACACGACATCGCTCAAGGTTCACACTACAGCCACCAC
CCCCCAACACACACCACTCGGCTACCCATCTCAAGCCTCAACATTCTCAA
CGCGCACCACACACTCCATTCTACAGCAGTACACACGAGCTTTCGCTAGT
GCCTGGCGAAAACAAATCCGCTTGCAGACAAGAAGGACGCTGCCTCGGCC
AAGCAAGCATTGACTTCACGGTCTCCTCGCCACGTTCGGGAAACAGCAGC
TTTTTTCACGTGGCCGACGCATCATGGAGCTCCGACGAAGCGCAGCCTTA
GCCCTGGTCGGCCTTCTCGCCGCCACCAGCACCGCGGCAGCGGCGGACAC
CCCTTCCCCCAACGAGCCCATCCCCAAGCCCGACTGCGACTCCGACATCG
CGGTCTCGATCCGTTACGCCGGCACCACGGCGCGCCTGTATCTCGAGTCG
GCAGACAACGGCACCACCCGCGGCGGCTGCGTGACCCTTGGGCAGATCTG
GGAGAGTCGGGCCGGCAAGGGGCCGCTGTACGCGGTAGACCCTGACTCGG
GGAACGTGAGCACTAGCGCGACCGGCACGTGGCTTCTCACGGAGGAACTG
TACGTGGAGGACGGCATCACGCTCAAGGTATACGGGTCGGAGGCCGGAGG
AGACGCTGACGAACTCCGACTGCTGAGCACTAACGAAACGTTCATCAACC
TCCGAGCGCATGGCGGGAGCCTGGACTTCGTCAGCACCAAGGTCTTCTCG
TGGGACACGAGCACCAACTCGCCGGACGAAGACGAAACCGACGGCCGGTC
GTACATCAGCGCCATCTCGGAGATCATCACCGACGAGGACGAGACTTGCG
AGGGTAACGCCAAGAACACCATGGGGGAGGCCCGCATGGACATCGAGAGC
AGCGAGATCGGCTACCTTGGGTACTGGGACAGCGAGAGCTATGGCCTCAC
TTGGAAGGTTCGCGGGTTCTGCGAGGACAAGTCTAACCCGGAGGTGTTCG
ACGACGTGAACGTGTACGGCAACGTGTACGACAGCGACATCCACCACATG
AACTTCGGCCTCTACACTTACGGCCACCAGCAGGGAGATTGGAGGAGGAA
CAAGATGCACGACAACTCCGGATACGGCTTCGACCCTCACGACGACAGCG
ACTTCCTCACCATCCACGACAACGAGGTGTACAACAACGGCTACCACGGT
ATCATCGCCTCCAAGCGCTGCAACGGCGTGTCTATCCAGGGCAACGAAGT
GTATGGCGGTGCCGAGACTTCTGCGGGCATCTTCCTGCACCGCAGCAGTG
ACGACGCCATCGTCAAGGGGAACTACGTGCACGACAACGGCGACGCCGGG
TTGGCGATGCTCGAGTCGTTCAACGCTGATGTGTCCGAGAACACGTTCGA
GAACAACAAGTACGGCGTGCGGTTCAGCGTGGGCTGTGCCGACAACGTCT
TCTCCAACAACACCATCAGCAACAACGCCGAGTACAACGCCTACTCGTAC
CTTGGGACGGACGAGCCGGACGTTGTTTCTTCCGGGCGGTCCCAGAACAA
CGTATTCTCACAGAACTCCTTCTCCGGCGCTGAGGAGACGATCAAGATCA
AGGAGGCCGACGGCACCCAGTTCCTCGACAACGTCTTCGAGGTTGGCGAT
GCCGATGGCCTGGTGGTGCGGTTCGACAATGCCACCGAGAACCTCATGCA
GGGCAACACCGGGCTCGACGACGGGGAGTTCGAGCTCAAGGTGGACAACG
ACGCCTGCTTTGACGGGGAGGCGGACTCCGGCTACGAGCCCGTCTGCTGA
GTGACATAGCCGTACTCCGCTTGTGTGCAGATTTTGTGGACGGCCAAAAC
GGCTGCTGTATAGTATAGAGGTGTTGGTTTTGCTAGCTCTCAGTGGGGTC
AAAGAACCCATCTGTTGGGGGGGGTTATAACTCAACTTCGCCGTGCGTCG
ATATTGTGCCGGCAGCATAGCATCAGATTTGGCCGCATTACTGTTGTTCT
CACCCTTTCGTGGTGTTGTTGTTCGTTCTTGGCATCCAAATTGTAAGGGG
ATTAGGGTTCCTTTCGTTGTACTTGTGCGATTGTCGTCGTTCGCGATTGA
TTTTTTCTCGCGAACGCTACCTAGATTTCATCGCCCTTGTGATCATGTCG
ATTTTTTCTGTCGACCGCCATCTACTGTAGAATTGCATCGCCCTCGTGAT
TGTTGGTGGTGGTCGTTGTGTTGTGAGTTGATATTTAACGCGTGGTGTGC
ATGTCCCGTACTGTAGAAACGAAGACAGGCGCGACTTACTGTTGACTTGT
GGCTTGATGTGAAGCGGCTGCCAAGGGCGCAAGCTGTAGCAACTACCCCA
ACCGCTATGTATGGACGCGCTCGCTACCGGTTTTAGGGTTCAAAACCGAA
ATGGTCGAAACAAGCGGTGTTCTGTAAGTTTGTTAACACATTGTTTGTCC
CTTGCTTCGTAAATGTTGTCGTCTCCGTATGCGAGGATCGTGGTGTGTCC
AGGCTCAGTATTGTAGTGTACTATTATTGCAATGTCGTGACGTATTCTGG
TTGTCGGTGTTGTCTCTTGTTTTCGGGTTTGATGGTACAGTAGTACCGCA
GTTTCCTTTCACCACCACAGTGTGGAATTGTTGGGTGGTTTGTTTCGTGA
TAAGCAGGAAGGCGGATGGCATTTTTGGTTGTTGTGCGGGACGTCGAGAG
ATGGGTCACACGTACGTGTTTTGAAGCAGCAGGCCGCCCTTGGGTGATAC
TGATGCAATAGAGCTTCCGTGCGACCACCTGGTCTTGACAAGGTAAACTT
CCCTTTCAGGGTCTTTTGCAAGTACACAAGACGTATGTGGGTTTCAATTG
TGTGCTTGGGGTTCAAGAACGTGTAGGCGTTTTCGTGTTTGTTTCGTTGC
GATGTCCTCGATAGAGACGTCGGACTACTGTAATCAAGCTTTCTTTTTTT
TCGTAGTTGCCAACGTCGAGACCCACCGGACAATCTTCGAGCTTGAGGCG
TCCAAACGCCATACAAAAGACTACAGTAGGATTACGATGTCTCGCTACGT
CGTTCGGGTAAGGGACTTGGACATGTGCGTGCGTTGATGATGGGAGAACA
CGATGGATGAATAAATCCCGCTGATAATGACCAAACAATCAACAGCAGTG
TGCCAATTTGTCTGGAATGGCACACCGTAGCGGCCCCAACGTGAAGCAGG
CGGCTGCGATTGTCCCATATTTCCCGCCTTGCGCGTGCCAGTCCCTCACA
ACTCCAAATCTACCGCCGTAAGCTCGTCGCTCCAACTCAACCTTCCC
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protein sequence of Ec-00_006370.1

>Ec-00_006370.1 ID=Ec-00_006370.1|Name=Ec-00_006370.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=509bp
MELRRSAALALVGLLAATSTAAAADTPSPNEPIPKPDCDSDIAVSIRYAG
TTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSAT
GTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSL
DFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTM
GEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGN
VYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDN
EVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGN
YVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISN
NAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQF
LDNVFEVGDADGLVVRFDNATENLMQGNTGLDDGEFELKVDNDACFDGEA
DSGYEPVC*
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mRNA from alignment at chr_00:10055202..10061617+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_006370.1 ID=Ec-00_006370.1|Name=Ec-00_006370.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=6416bp|location=Sequence derived from alignment at chr_00:10055202..10061617+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
CAACGCGTATGCCGGGCTATAGAGGTGGTCCATCTGGAGAGGAAGGCGGT
GACGGTACAGTGCTGGAGAAACGTGGTCAGGCTGGAGGCTGACTGGCGGC
GGATGTGGTGCATGTGTCCACGGGTGGATGTCTGGATCCTTCCCAGAAAA
CGTTTTTGGACTTGTGCGCAACGGCCCGCACGCTTTTCCCATCTTCCCAC
CGCATCAAAATGCGAGACCAAAACTTCTGGGAAACGTCGGCACTGGGAGA
TTTAAGGAATAGTACACGACATCGCTCAAGGTTCACACTACAGCCACCAC
CCCCCAACACACACCACTCGGCTACCCATCTCAAGCCTCAACATTCTCAA
CGCGCACCACACACTCCATTCTACAGCAGTACACACGAGCTTTCGCTAGT
GCCTGGTGAGTGCGGTACAATGTATGACTCGGCAAGTTTTACTTGTAACG
TCCTGTGTCAACGAGGAGGCTACAGCTGTAGTCTATGGCGTCTGGACCAC
AAGCAGTATACTCAGCACATCGCTACGCATCTATCAGGGACCTTGAGCCA
TTTCGTGTAGGATGAGCGTGTTCATGCATGTCGTCGATATCCTGGCATGA
CGAAAACGTGGTTGCTGCTGCTGTCACCAGGCGAACACTCGCGTATGAAG
ACGATGTCAACACATGATTAGGGTGTTTTTTGGGAAGAGTTGACCAGTGC
GCCAAAGCATTCAATGGGTACACGTATGCGAGAGCAATAAAAACATGAAC
AACGGCAGCGTTGAGAAGACATGTTGTAGTCGCTGCTCGAAGTCTCCAAC
ATTCTCCACCAGCTGTGGCCCCGACCAAGGCCTGCAACACCATGAAAATT
GAAAACATGCACACCGACCGACCGTACGCCCTGCTCCCACCTCACTCTCT
CTGAAACTCAAATGTATCTCGGCACAGGCGAAAACAAATCCGCTTGCAGA
CAAGAAGGACGCTGCCTCGGCCAAGCAAGCATTGACTTCACGGTCTCCTC
GCCACGTTCGGGAAACAGCAGCTTTTTTCACGTGGCCGACGCATCATGGA
GCTCCGACGAAGCGCAGCCTTAGCCCTGGTCGGCCTTCTCGCCGCCACCA
GCACCGCGGCAGCGGCGGACACCCCTTCCCCCAACGAGCCCATCCCCAAG
CCCGACTGCGACTCCGACATCGCGGTCTCGATCCGTTACGCCGGCACCAC
GGCGCGCCTGTATCTCGAGTCGGCAGACAACGGCACCACCCGCGGCGGCT
GCGTGACCCTTGGGCAGATCTGGGAGAGTCGGGCCGGCAAGGGGCCGCTG
TACGCGGTAGACCCTGACTCGGGGAACGTGAGCACTAGCGCGACCGGCAC
GTGGCTTCTCACGGAGGAACTGTACGTGGAGGACGGCATCACGCTCAAGG
TTCGGATTGAGACTGATGAGCAATGTTGACAAACATGGTAGATTTTCATG
TTTGGAGGCATGTTGTGATGGGTCCAACGCGATTCTATTACTTCTATGTA
GGACGACTCGCTCTGGTGCCTTTTTGCCATATTTGTACAGCCGACGGATC
GTTAGCCTACATGAAGGTTTGTCGCATTTCGGGTACAGATCGGGGGGGCG
CATCGTCGACCACCTCTAGGCGAGCTGCTGTTGAACCTTCTTCTACTGCT
GTAGAACGTATCGCGTAGGCACACAATCCCAGCACACGCAACGTGTGTGC
TGGTGTCAACAAGGACCTCGTAAGGGCTGGAAAGGGGCGATGCCTGTCTG
ATCCCAACGTCTCGATATTGCTTTGACGCCTGTTGCTCCCGTCTGAACAG
GTATACGGGTCGGAGGCCGGAGGAGACGCTGACGAACTCCGACTGCTGAG
CACTAACGAAACGTTCATCAACCTCCGAGCGCATGGCGGGAGCCTGGACT
TCGTCAGCACCAAGGTAGACAAGAAGCGACAGCAATCAGCCCGCGCGGGG
CGTTGTCGCCCTCTGTTGCTCATTTTTCGTGGAAGCTGATTGGTCCACTC
GGGGTGCCTTTTGCGTCACGGTCAGGGTTTCCCAGAACCGTTCCTAGAAC
CGTTTCGTTGTTTTCCGTCGTACATTCGACCGTCTGTGTTCCTCGCGCTC
TCTGCTGGTGCTGCCCGTTCCTCCTCTTCTTTCACCGCGCTACGCTCCCA
TCGTACCCCAACGTTTCATCTGTTTCGCAAATTATCACACTTTTCCAACG
CTCGCTCCCCGCTCCGCCTCTTGCCCAACGCTGCTGAACTGAAGGTCTTC
TCGTGGGACACGAGCACCAACTCGCCGGACGAAGACGAAACCGACGGCCG
GTCGTACATCAGCGCCATCTCGGAGATCATCACCGACGAGGACGAGACTT
GCGAGGGTAACGCCAAGAACACCATGGGGGAGGCCCGCATGGACATCGAG
AGCAGCGAGATCGGCTACCTTGGGTACTGGGACAGCGAGAGCTATGGCCT
CACTTGGAAGGTGCATACATGTAGTGATTCGGTTTGTGTCGTTTTTGATT
CTACATGGTGCGGTTGGTTTTGATTGTCGTGTCCTATGTCGGCGAACGAT
GTATTCTGGTAGGTACGTACGAGGACACGTGTTTGGGAGCTGGCGACGGG
TGTGAAGAATTTTCAACCAAGCCGTGTGAACAAACACGTCGTGCGTCCTT
CGCGGCGCGTACCAGTGGAATCGAGTGGCTGTCTGCGGTGGAACACTTTT
AACCTCAGTTGTTGGTTGGTTGCACTGCGAATGAAACGCCCCAGGTTCGC
GGGTTCTGCGAGGACAAGTCTAACCCGGAGGTGTTCGACGACGTGAACGT
GTACGGCAACGTGTACGACAGCGACATCCACCACATGAACTTCGGCCTCT
ACACTTACGGTAAGCTTCGGGACGTTGATTCGGTTTTCGAGTTCTCGTGG
TTGGCTGCTGCCGACAGCGTATCCGCGAGTTTTCGGTGCAGTGGTTGTGT
CGTGCGTCAATATTCCTCAGCAACTACTGTAGTCATGACTTCTTCTGTCT
TGCAGATCTAGTCTACTCCTGTGACCCCCCACCGATCCACGCCCTTCTCC
CTGTCCGTCACGCCACCCGACAGGCCACCAGCAGGGAGATTGGAGGAGGA
ACAAGATGCACGACAACTCCGGATACGGTAAGCTACTTCTTCTTGGTTGC
GTCGAAAGATCTTGTTTCTTCCCTCGTAGTGGCGGCCTTTCGTTCCTATT
TCGGTCCGCTGTTAGCTCTGCTGGTGTTAATTACCGAGTAGTTGGTCGCC
CGAAAGCAGGGCGGTATCTCTCATGACAGTAAGTGTTGAAGGTTTTGCGA
TACTGTACCCCCTTACACCCACGTCATCATCTCTCATTTGTATGTCCCGC
TGTAACCCCTGCCTATGCTATGTTGCTACCGGCCAGGCTTCGACCCTCAC
GACGACAGCGACTTCCTCACCATCCACGACAACGAGGTGTACAACAACGG
CTACCACGGTGAGACTACTGTACGATCAAGACGAACAAACCTCTTGCATA
CCCACCCTCTATTCAGTTGGGCTTGCCACTTTGTGTGCTCCCTATATTAG
TGCCGTAGCACACGGCGAACGGACATGGTGGGCTGTCGAGTGTCATTTGA
GATGCCATATTTTTCTTCTCTGGTATCGCTGCCATCGATTTGTTGATGCC
ATCGGGAAATGAGCCTTCGGGTTCCCCTTTATCTCACACCTACCTCCCCC
TCTTGCGACACTTCCCCCTTCTTTGATGACTTCGGCTATCCAGGTATCAT
CGCCTCCAAGCGCTGCAACGGCGTGTCTATCCAGGGCAACGAAGTGTATG
GCGGTGCCGAGACTTCTGCGGGCATCTTCCTGCACCGCAGCAGTGACGAC
GCCATCGTCAAGGGTGAGTCGTATTGCTTTGTTCTTGGCGGTGCTCGGGT
GTGTTACTGTGGGCCCTGCCGTTGGCCGTCCCTACGCGCGTACTCCTGTC
CTTTCGATGCTACTGTTTTACCGACATAGATGCTGGCCTGCCTCCCCCCC
TTCGCCTTCTTTGAACTGTATACGAAAATCTGACCCCCGTTGTTTTTTTC
TATTGCTCTCAGGGAACTACGTGCACGACAACGGCGACGCCGGGTTGGCG
ATGCTCGAGTCGTTCAACGCTGATGTGTCCGAGAACACGTTCGAGAACAA
CAAGTACGGCGTGCGGTTCAGCGTGGGCTGTGCCGACAACGTCTTCTCCA
ACAACACCATCAGCAACAACGCCGAGTAAGTGTGACGAAGGCAGGGAGAA
CGATCAAGCGGACAAGGGACAGCAGTACATGTAGTGGGTCTTCTTTTACA
ACAGGCACAAACCCTCAAGATAGCGTGCTCCAAATGGAATTGATTCGATT
GTAGTGGTGGGGCATATGGGGCAGAGCAGAGAGACCCGATAGCACAGCCG
GGTTCGTTTCTCATCCAGTCCTGCGACATCCACTCTGCCGTTTACCACCT
GGTATATCGGCATTGATCCACGTGAAAATGGCACTGCAATGGTGCTCGTT
TGCCGGGGTGCTCACCCCCCATGACGCCCCCCGCCCCCATTTTGTTCCGA
AAAGAGATGTACTCACCCGAACCCCCCCCCCCTCTCTCCGCCTCTTTCAG
GTACAACGCCTACTCGTACCTTGGGACGGACGAGCCGGACGTTGTTTCTT
CCGGGCGGTCCCAGAACAACGTATTCTCACAGAACTCCTTCTCCGGCGCT
GAGGAGACGATCAAGATCAAGGAGGCCGACGGCACCCAGTTCCTCGACAA
CGTCTTCGAGGTTGGCGATGCCGATGGCCTGGTGGTGCGGTTCGACAATG
CCACCGAGAACCTCATGCAGGGCAACACCGGGCTCGACGACGGGGAGTTC
GAGCTCAAGGTGGACAACGACGCCTGCTTTGACGGGGAGGCGGACTCCGG
CTACGAGCCCGTCTGCTGAGTGACATAGCCGTACTCCGCTTGTGTGCAGA
TTTTGTGGACGGCCAAAACGGCTGCTGTATAGTATAGAGGTGTTGGTTTT
GCTAGCTCTCAGTGGGGTCAAAGAACCCATCTGTTGGGGGGGGTTATAAC
TCAACTTCGCCGTGCGTCGATATTGTGCCGGCAGCATAGCATCAGATTTG
GCCGCATTACTGTTGTTCTCACCCTTTCGTGGTGTTGTTGTTCGTTCTTG
GCATCCAAATTGTAAGGGGATTAGGGTTCCTTTCGTTGTACTTGTGCGAT
TGTCGTCGTTCGCGATTGATTTTTTCTCGCGAACGCTACCTAGATTTCAT
CGCCCTTGTGATCATGTCGATTTTTTCTGTCGACCGCCATCTACTGTAGA
ATTGCATCGCCCTCGTGATTGTTGGTGGTGGTCGTTGTGTTGTGAGTTGA
TATTTAACGCGTGGTGTGCATGTCCCGTACTGTAGAAACGAAGACAGGCG
CGACTTACTGTTGACTTGTGGCTTGATGTGAAGCGGCTGCCAAGGGCGCA
AGCTGTAGCAACTACCCCAACCGCTATGTATGGACGCGCTCGCTACCGGT
TTTAGGGTTCAAAACCGAAATGGTCGAAACAAGCGGTGTTCTGTAAGTTT
GTTAACACATTGTTTGTCCCTTGCTTCGTAAATGTTGTCGTCTCCGTATG
CGAGGATCGTGGTGTGTCCAGGCTCAGTATTGTAGTGTACTATTATTGCA
ATGTCGTGACGTATTCTGGTTGTCGGTGTTGTCTCTTGTTTTCGGGTTTG
ATGGTACAGTAGTACCGCAGTTTCCTTTCACCACCACAGTGTGGAATTGT
TGGGTGGTTTGTTTCGTGATAAGCAGGAAGGCGGATGGCATTTTTGGTTG
TTGTGCGGGACGTCGAGAGATGGGTCACACGTACGTGTTTTGAAGCAGCA
GGCCGCCCTTGGGTGATACTGATGCAATAGAGCTTCCGTGCGACCACCTG
GTCTTGACAAGGTAAACTTCCCTTTCAGGGTCTTTTGCAAGTACACAAGA
CGTATGTGGGTTTCAATTGTGTGCTTGGGGTTCAAGAACGTGTAGGCGTT
TTCGTGTTTGTTTCGTTGCGATGTCCTCGATAGAGACGTCGGACTACTGT
AATCAAGCTTTCTTTTTTTTCGTAGTTGCCAACGTCGAGACCCACCGGAC
AATCTTCGAGCTTGAGGCGTCCAAACGCCATACAAAAGACTACAGTAGGA
TTACGATGTCTCGCTACGTCGTTCGGGTAAGGGACTTGGACATGTGCGTG
CGTTGATGATGGGAGAACACGATGGATGAATAAATCCCGCTGATAATGAC
CAAACAATCAACAGCAGTGTGCCAATTTGTCTGGAATGGCACACCGTAGC
GGCCCCAACGTGAAGCAGGCGGCTGCGATTGTCCCATATTTCCCGCCTTG
CGCGTGCCAGTCCCTCACAACTCCAAATCTACCGCCGTAAGCTCGTCGCT
CCAACTCAACCTTCCC
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Coding sequence (CDS) from alignment at chr_00:10055202..10061617+

>Ec-00_006370.1 ID=Ec-00_006370.1|Name=Ec-00_006370.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1527bp|location=Sequence derived from alignment at chr_00:10055202..10061617+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGAGCTCCGACGAAGCGCAGCCTTAGCCCTGGTCGGCCTTCTCGCCGC
CACCAGCACCGCGGCAGCGGCGGACACCCCTTCCCCCAACGAGCCCATCC
CCAAGCCCGACTGCGACTCCGACATCGCGGTCTCGATCCGTTACGCCGGC
ACCACGGCGCGCCTGTATCTCGAGTCGGCAGACAACGGCACCACCCGCGG
CGGCTGCGTGACCCTTGGGCAGATCTGGGAGAGTCGGGCCGGCAAGGGGC
CGCTGTACGCGGTAGACCCTGACTCGGGGAACGTGAGCACTAGCGCGACC
GGCACGTGGCTTCTCACGGAGGAACTGTACGTGGAGGACGGCATCACGCT
CAAGGTATACGGGTCGGAGGCCGGAGGAGACGCTGACGAACTCCGACTGC
TGAGCACTAACGAAACGTTCATCAACCTCCGAGCGCATGGCGGGAGCCTG
GACTTCGTCAGCACCAAGGTCTTCTCGTGGGACACGAGCACCAACTCGCC
GGACGAAGACGAAACCGACGGCCGGTCGTACATCAGCGCCATCTCGGAGA
TCATCACCGACGAGGACGAGACTTGCGAGGGTAACGCCAAGAACACCATG
GGGGAGGCCCGCATGGACATCGAGAGCAGCGAGATCGGCTACCTTGGGTA
CTGGGACAGCGAGAGCTATGGCCTCACTTGGAAGGTTCGCGGGTTCTGCG
AGGACAAGTCTAACCCGGAGGTGTTCGACGACGTGAACGTGTACGGCAAC
GTGTACGACAGCGACATCCACCACATGAACTTCGGCCTCTACACTTACGG
CCACCAGCAGGGAGATTGGAGGAGGAACAAGATGCACGACAACTCCGGAT
ACGGCTTCGACCCTCACGACGACAGCGACTTCCTCACCATCCACGACAAC
GAGGTGTACAACAACGGCTACCACGGTATCATCGCCTCCAAGCGCTGCAA
CGGCGTGTCTATCCAGGGCAACGAAGTGTATGGCGGTGCCGAGACTTCTG
CGGGCATCTTCCTGCACCGCAGCAGTGACGACGCCATCGTCAAGGGGAAC
TACGTGCACGACAACGGCGACGCCGGGTTGGCGATGCTCGAGTCGTTCAA
CGCTGATGTGTCCGAGAACACGTTCGAGAACAACAAGTACGGCGTGCGGT
TCAGCGTGGGCTGTGCCGACAACGTCTTCTCCAACAACACCATCAGCAAC
AACGCCGAGTACAACGCCTACTCGTACCTTGGGACGGACGAGCCGGACGT
TGTTTCTTCCGGGCGGTCCCAGAACAACGTATTCTCACAGAACTCCTTCT
CCGGCGCTGAGGAGACGATCAAGATCAAGGAGGCCGACGGCACCCAGTTC
CTCGACAACGTCTTCGAGGTTGGCGATGCCGATGGCCTGGTGGTGCGGTT
CGACAATGCCACCGAGAACCTCATGCAGGGCAACACCGGGCTCGACGACG
GGGAGTTCGAGCTCAAGGTGGACAACGACGCCTGCTTTGACGGGGAGGCG
GACTCCGGCTACGAGCCCGTCTGCTGA
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Synonyms
The feature 'Ec-00_006370.1' has the following synonyms
Synonym
Esi0495_0002
Esi_0495_0002
MEP5