Ec-00_005790.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR
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Overview
Homology
BLAST of Ec-00_005790.1 vs. uniprot
Match: D7G2D9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2D9_ECTSI) HSP 1 Score: 642 bits (1657), Expect = 1.100e-220 Identity = 337/418 (80.62%), Postives = 337/418 (80.62%), Query Frame = 3
Query: 315 MSTLASQSVSLHATPVGGRERPQGSYVSAETLTNEANFSGETQQWHVIGSAGATARETDDPSSRSLCALPFACPLTVTAKQGGMVKIISPVEGWVPVADDVGYVLLAKGDGSAGARWRYRVVCRDGAFVRHGIELTSPFLFNLPWHSVVEVLERRINDAGLPRLKIAEGWISEVLNPLSGQRGPVVEIVKLLQPLQYRVVLPDGAVVRRTVELASSQVKTIAAGELVQVSAKKFSDLGNRCVQRLKLADGSGWLSMRLNKEPPDDIPVVQYAGLGDASPSARVTPLPGARSRGQEGTTGLGFWRRSPTVPGSGGXXXXXXXXXXXAPAIKGGAAAVEGDTNDDDDQKADLFKIKHSDSLGEDDNCVVCLSGPRTATIVHGEIGHIACCLECARILKARGDACPVCRAPIDSVVQHFWA 1568
MSTLASQSVSLHATPVGGRERPQGSYVSAETLTNEANFSGETQQWHVIGSAGATARETDDPSSRSLCALPFACPLTVTAKQGGMVKIISPVEGWVPVADDVGYVLLAKGDGSAGARWRYRVVCRDGAFVRHGIELTSPFLFNLPWHSVVEVLERRINDAGLPRLKIAEGWISEVLNPLSGQRGPVVEIVKLLQPLQYRVVLPDGAVVRRTVELASSQVKTIAAGELVQVSAKKFSDLGNRCVQRLKLADG GAAAVEGDTNDDDDQKADLFKIKHSDSLGEDDNCVVCLSGPRTATIVHGEIGHIACCLECARILKARGDACPVCRAPIDSVVQHFWA
Sbjct: 1 MSTLASQSVSLHATPVGGRERPQGSYVSAETLTNEANFSGETQQWHVIGSAGATARETDDPSSRSLCALPFACPLTVTAKQGGMVKIISPVEGWVPVADDVGYVLLAKGDGSAGARWRYRVVCRDGAFVRHGIELTSPFLFNLPWHSVVEVLERRINDAGLPRLKIAEGWISEVLNPLSGQRGPVVEIVKLLQPLQYRVVLPDGAVVRRTVELASSQVKTIAAGELVQVSAKKFSDLGNRCVQRLKLADG---------------------------------------------------------------------------------GAAAVEGDTNDDDDQKADLFKIKHSDSLGEDDNCVVCLSGPRTATIVHGEIGHIACCLECARILKARGDACPVCRAPIDSVVQHFWA 337
BLAST of Ec-00_005790.1 vs. uniprot
Match: A0A7S2S0R0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S0R0_9STRA) HSP 1 Score: 268 bits (685), Expect = 3.900e-76 Identity = 156/370 (42.16%), Postives = 209/370 (56.49%), Query Frame = 3
Query: 534 PLTVTAKQGGMVKIISPVEGW--------VPVADDVGYVLLAKGDGSAGARWRYRVVCRDGAFVRHGIELTSPFLFNLPWHSVVEVLERRINDAGLPRLKIAE--GWISEVLNPLSGQRGPVVEIVKLLQPLQYRVVLPDGAVVRRTVELASSQVKTIAAGELVQVSAKKFSDL-GNRCVQRLKLAD--GSGWLSMRLNKEPPDDIPVVQYAGLGDASPSARVTPLPGARSRGQEGTTGLGFWRRSPTVPGSGGXXXXXXXXXXXAPAIKGGAAAVEGDTNDDDDQKADLFKIKHSDSLGEDDN------------CVVCLSGPRTATIVHGEIGHIACCLECARILKARGDACPVCRAPIDSVVQHFWA 1568
P T +A+ ++++SP++GW V A G V + KG +RW YRVVC DGA VR G+EL+S + + H+++E+ ER+IN+ GL RL+ A+ GWISE LNPLSG RGPVV ++K+ +PL++ V+LP+GAVVRRT+EL+S + + GE++ + AK FS+ C+ RLKLA G GW+S RLN+ PPDD+PVV P P SR +EGT+G +GG A A + DL + S + + C+VCLS PR ATIVHGE GHIACC+ECARILKA+GD CPVCR ID V+QHFWA
Sbjct: 90 PSTHSAQFFHWLQVVSPLQGWILDTEIDTVSRARQPGRVNIIKGRVLESSRWLYRVVCADGAVVRSGLELSSDHKYTVRQHAIIEISERKINEQGLARLRTADERGWISEQLNPLSGHRGPVVSLLKMPRPLRFNVILPEGAVVRRTMELSSMITRVVPTGEVISIDAKSFSNHPATHCIPRLKLASESGGGWISQRLNRLPPDDVPVV--IPQDTQCPGGSDVPFYEYSSR-REGTSGXXXXXXXXXXXXAGGNDPLCANGVDEEEEDMSLARATA---------RKDLMRFSASAKRAREGSQSPEAVDETEIECIVCLSAPRQATIVHGETGHIACCMECARILKAKGDRCPVCRMSIDLVIQHFWA 447
BLAST of Ec-00_005790.1 vs. uniprot
Match: A0A7S2V8C6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V8C6_9STRA) HSP 1 Score: 264 bits (674), Expect = 2.200e-75 Identity = 160/392 (40.82%), Postives = 207/392 (52.81%), Query Frame = 3
Query: 423 NFSGETQQWHVIGSAGATARETDDPSSRSLCALPFACPLTVTAKQGGMVKIISPVEGWVPVADDVGYVLLAKGDGSAGARWRYRVVCRDGAFVRHGIELTSPFLFNLPWHSVVEVLERRINDAGLPRLKIAEGWISEVLNPLSGQRGPVVEIVKLLQPLQYRVVLPDGAVVRRTVELASSQVKTIAAGELVQVSAKKFSDL-GNRCVQRLKLADGSGWLSMRLNKEPPDDIPVVQYAGLGDASPSAR---------VTPLPGARSRGQEGTTGLGFWRRSPTVPGSGGXXXXXXXXXXXAPAIKGGAAAVEGDTNDDDDQKADLFKIKHSDSLGEDDNCVVCLSGPRTATIVHGEIGHIACCLECARILKARGDACPVCRAPIDSVVQHFWA 1568
N S + WHV+ S G R+ +D + LPF + + + I PV G V D G LLA GD GA+WRYRVVC GA VR G+ELTS + + HS+ E ERR+N GL RL++ +GW+SE LNPLSGQRG V ++V L PL+Y VV P GAVVR + EL S + G ++V K+FS+ R V RL+L+ GW+S LN +PP I +Q + + + +A P P A+ G G G V G IK A A E + F +S GED +CV+CLS PR T VHG+ GHIACCLECAR++KA GD+CPVCR PI+ V+QHFWA
Sbjct: 24 NASTDISPWHVVASEGCEVRDNNDSI---VAELPFGTLIHGSVLDSNQLVIKYPVVGCCKVRSDGGITLLAPGDLLEGAKWRYRVVCPTGAVVREGLELTSAYCRTIEVHSIFEASERRVNRQGLARLRLEDGWVSEALNPLSGQRGLVAQLVPLPSPLRYEVVHPSGAVVRSSPELTSPILCIHPPGTSLEVDEKRFSNHPAKRNVPRLRLSRSEGWVSQCLNADPPAPILRLQGVAIDNTTSAAMPAPTIISPSAPPCPDAKENGDSGRRN-GDGEEDECVHCKG--------------RIKKEAIATE-----------ESFLCMNS-VAGEDHSCVICLSNPRNCTFVHGDTGHIACCLECARVVKANGDSCPVCRNPIEKVIQHFWA 385
BLAST of Ec-00_005790.1 vs. uniprot
Match: A0A836CML9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CML9_9STRA) HSP 1 Score: 260 bits (665), Expect = 8.640e-75 Identity = 158/381 (41.47%), Postives = 199/381 (52.23%), Query Frame = 3
Query: 441 QQWHVIGSAGATARETDDPSSR-SLCALPFACPLTVTAKQGGM--VKIISPVEGWVPVADDVGYVL-LAKGDGSAGARWRYRVVCRDGAFVRHGIELTSPFLFNLPWHSVVEVLERRINDAGLPRLKIAEGWISEVLNPLSGQRGPVVEIVKLLQPLQYRVVLPDGAVVRRTVELASSQVKTIAAGELVQVSAKKFSDL-GNRCVQRLKLADGSGWLSMRLNKEPPDDIPVVQYAGLGDASPSARVTPLPGARSRGQEGTTGLGFWRRSPTVPGSGGXXXXXXXXXXXAPAIKGGAAAVEGDTNDDDDQKADLFKIKHSDSLGEDDNCVVCLSGPRTATIVHGEIGHIACCLECARILKARGDACPVCRAPIDSVVQHFWA 1568
++WHV+GSAG + R++ DP+S L F + V K G V+I SP +G+V + ++ G + L G + ARWRY+VVCR GA VR G L S + LP+ S++EV ER IN+ G+ RL+ A GWISE LNPLSGQRG +VE++ L+ PL++ VV DG VV R VELAS+ ++ + AG LV V ++KFS+ CV RLKL DGSGW P AR A+L KIK S DDNCVVCL R AT+VHG +GHIACC ECARILKARGD CPVCR PID V+QHFWA
Sbjct: 42 EEWHVVGSAGLSVRDSSDPASPPGRRRLHFGTIVRVAHKAEGATAVQISSPEQGFVSIQEEGGTGIGLVPGGATVAARWRYKVVCRLGALVREGPSLASSAVEELPYLSIIEVSERLINEQGIARLRTASGWISEALNPLSGQRGAIVELIPLIAPLRFVVVQGDGVVVTRGVELASTFIRRLEAGALVDVCSRKFSEFPAEHCVPRLKLCDGSGWA----------------------LEPEAR-----------------------------------------------------------------AELSKIKGSALRDADDNCVVCLVQARMATLVHGAVGHIACCTECARILKARGDVCPVCREPIDLVIQHFWA 335
BLAST of Ec-00_005790.1 vs. uniprot
Match: A0A7S2BY27_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BY27_9STRA) HSP 1 Score: 258 bits (659), Expect = 4.970e-73 Identity = 151/360 (41.94%), Postives = 203/360 (56.39%), Query Frame = 3
Query: 570 KIISPVEGWV-----------------PVADDVGYVLLAKGDGSAGARWRYRVVCRDGAFVRHGIELTSPFLFNLPWHSVVEVLERRINDAGLPRLKIAE--GWISEVLNPLSGQRGPVVEIVKLLQPLQYRVVLPDGAVVRRTVELASSQVKTIAAGELVQVSAKKFSDL-GNRCVQRLKLADGSGWLSMRLNKEPPDD---IPVVQYAGLGDASPSARVTPLP-GARSRG---QEGTTGLGFWRRSPTVPGSGGXXXXXXXXXXXAPAIKGGAAAVEGDTNDDDDQKADLFKIKHSDSLGEDDNCVVCLSGPRTATIVHGEIGHIACCLECARILKARGDACPVCRAPIDSVVQHFWA 1568
+++ P++GWV P + VG V + +G + +RW Y VVC DGA VR G++L+S + L H++VE+ ER+ N+ GL RL+ A+ GWISE LNPLSG RGPVV +V + L++ V LP+GAVVRRT EL+S K + V + K FSD N C+ R+KLADGSGW+S +LN+EPP+D + ++ YA D+ P + P P G R R Q GT W+ S + G I+G ++ DS+ E+ CVVCL+ PR+ATIVH GHIACC+ECAR+LKARGD CPVCR ID V+QHFWA
Sbjct: 84 EVLEPIKGWVLDTEIERSPSPEQQVSGPPSWRVGSVTVTQGGVTEASRWIYAVVCEDGALVRSGLDLSSSHTYTLRMHALVEISERKFNEQGLARLRTADKKGWISEQLNPLSGHRGPVVVLVPMPAVLEFNVALPEGAVVRRTCELSSPITKLVPFQGHVNIDRKCFSDHPANHCIPRMKLADGSGWVSQKLNREPPNDSMVLALLGYANPRDSQPHPPLPPPPSGDRQRAVTPQNGTESSTDWKISGALAGM---------------KIRGSSS---------------------KDSVDEE-GCVVCLAAPRSATIVHSGTGHIACCMECARVLKARGDRCPVCRMEIDLVIQHFWA 406
BLAST of Ec-00_005790.1 vs. uniprot
Match: W7TQ97_9STRA (E3 ubiquitin-protein ligase mdm2 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TQ97_9STRA) HSP 1 Score: 254 bits (649), Expect = 3.030e-72 Identity = 153/342 (44.74%), Postives = 197/342 (57.60%), Query Frame = 3
Query: 657 ARWRYRVVCRDGAFVRHGIELTSPFLFNLPWHSVVEVLERRINDAGLPRLKIAEGWISEVLNPLSGQRGPVVEIVKLLQPLQYRVVLPDGAVVRRTVELASSQVKTIAAGELVQVSAKKFSDLGN-RCVQRLKLADGSGWLSMRLNKEPPDDIPVVQYAGLGDASPSARVTPL-------PGARSRGQEGTTGLGFWRR--SPTVPGSG---GXXXXXXXXXXXAPAIKGGAAAVEGDTNDDDDQKADLF-KIKHS---------------DSLG---------EDDNCVVCLSGPRTATIVHGEIGHIACCLECARILKARGDACPVCRAPIDSVVQHFWA 1568
A + YRVVC DGA+VR G+EL+S L+ + S +EVLER +N+ GL RL+ +GWISE+LNPLSGQRGP+VE+V L PL++R+ PDGA+VR +EL+S V TI AG+ + V+ K+FSD + RCV RLKLADG GW+SMR+N PP D VV+ GL + + + GA EG + ++ SP SG G P K E + Q AD+ KI+++ S G ED +C+VC S R AT VHGE GHIACCLECAR+LK RGD CPVCR P+DSV+QHFWA
Sbjct: 19 AAFHYRVVCEDGAYVRAGLELSSRHLYTIGSQSTIEVLERCVNNQGLARLRTRDGWISEMLNPLSGQRGPIVELVPLQHPLKFRITFPDGALVRSGIELSSGVVGTIPAGQEIVVTEKRFSDTPSYRCVPRLKLADGLGWISMRINSPPPSDADVVELLGLACSREVDNYSTMFDGLVSVHGAGMLDGEGDESIHGYQDGGSPLDVTSGERRGSLSMDLSVSEPQPVGKNRHTRYEQQRHQQ-GQIADMSEKIRYALQPASAGIDEQSGTATSKGDQYERRRTKEDHSCLVCFSACRNATFVHGESGHIACCLECARVLKGRGDPCPVCRLPVDSVIQHFWA 359
BLAST of Ec-00_005790.1 vs. uniprot
Match: A0A8J2X1W1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X1W1_9STRA) HSP 1 Score: 244 bits (624), Expect = 1.170e-68 Identity = 156/342 (45.61%), Postives = 198/342 (57.89%), Query Frame = 3
Query: 570 KIISPVEGW-------VPVADDVGYVLLAKGDGSAGARWRYRVVCRDGAFVRHGIELTSPFLFNLPWHSVVEVLERRINDAGLPRLKIAEGWISEVLNPLSGQRGPVVEIVKLLQPLQYRVVLPDGAVVRRTVELASSQVKTIAAGELVQVSAKKFSDL-GNRCVQRLKL-ADGSGWLSMRLNKEPPDDIPVVQYAGLGDASPSARVTPLPGARSRGQEGTTGLGFWRRSPTVPGSGGXXXXXXXXXXXAPAIKGGAAAVEGDTNDDDDQKADLFKIKHSDSLGEDDNCVVCLSGPRTATIVHGEIGHIACCLECARILKARGDACPVCRAPIDSVVQHFWA 1568
++++P GW V A DVG+ WRY VVCRDGA+VR G+EL S F LP +V EV ERR+N+ GL RL+ +GWISE LNPLSGQRGPV E + + PL +RVVL DGAVVR TVEL+S+ V I G V+V+AK++SD CV RL++ GW+S RLN+EPP D+ VV+ G+ + R +P +P XXXXXXXXXX PA+ G + DL ++G + CVVCL+ R AT VHGE GHIACCL CAR L+ARGD+CPVCR P+D V+QHF+A
Sbjct: 90 RVLTPTPGWCSASQCCVGRARDVGHA------------WRYVVVCRDGAYVRRGLELASTHAFTLPKDAVFEVRERRVNEQGLARLRTDDGWISEDLNPLSGQRGPVAEPLPVAAPLTFRVVLRDGAVVRETVELSSAIVSVIPCGRTVEVTAKQYSDHPALHCVPRLRVEGPARGWISQRLNREPPRDLEVVELVGVSEP--------------------------RVAPPLPXX---XXXXXXXXXXXPALTG--------------PEVDL-------AVGNESLCVVCLTDARNATFVHGETGHIACCLLCARALQARGDSCPVCRLPVDVVIQHFFA 369
BLAST of Ec-00_005790.1 vs. uniprot
Match: A0A7S1YRU4_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YRU4_9STRA) HSP 1 Score: 214 bits (545), Expect = 1.300e-53 Identity = 145/411 (35.28%), Postives = 194/411 (47.20%), Query Frame = 3
Query: 570 KIISPVEGWVPVADDVGYVLLAKGDGSAGAR---WRYRVVCRDGAFVRHGIELTSPFLFNLPWHSVVEVLERRINDAGLPRLKIAE-------------------------GWISEVLNPLSGQRGPVVEIVKLLQPLQYRVVLPDGAVVRRTVELASSQVKTIAAGELVQVSAKKFSDLG-NRCVQRLKLADGSGWLSMRLNKEPPDDIPVVQYAGLGDA----------------------SPSARVTP-------------LPGARSRG-QEGTTGLGFWRRSPTVPGSGGXXXXXXXXXXXAPAIKGGAAAVEGDTNDDDDQKADLFKI-------------KHSDSLGEDDNCVVCLSGPRTATIVHGEIGHIACCLECARILKARGDACPVCRAPIDSVVQHFWA 1568
KI SP+ G+V + D GY L G S+ + W +RV C DGA+VR G+ELTS + +P S + V + +N GL RL++ GWISE LNPLSGQRGP+ + V P YRV L DGAV+R VEL+SSQ+ G +++V + FS+ ++C++RL+LA G GW+S+RLN PP D VVQ G+ P+ V P LP R G + + + G + A + + LF+ + +L D+ C++CL+ PRTAT+VHGE GHIACCL CARILKARGD CPVCR PIDSV+Q FWA
Sbjct: 527 KIESPITGYVLYSVD-GYAYLGPGLPSSYVKPGAWIWRVTCPDGAYVREGLELTSVHVDTIPHGSFLRVTRKTVNSMGLSRLRVEASLEINDEFDDVHSGEEGESRMRTVVGWISESLNPLSGQRGPIAQPVPFPIPALYRVRLQDGAVIRSGVELSSSQIGHAPLGSILKVIGRSFSEHPMDQCIERLQLAGGGGWVSVRLNLPPPSDDLVVQLVGIDGTFDPDDPGSFHLESQQRVISEYRDPNPLVGPPVDEDASHASPALLPNREFRSLSTGISSINDTDDGTSFDEGGSSSLEPERHVGSNSRVNHNVATAADLSTNGSTAAPTLFRSGIGGGSTGMMMMGSMAKNLPPDERCLICLTEPRTATMVHGETGHIACCLTCARILKARGDRCPVCRLPIDSVIQQFWA 936
BLAST of Ec-00_005790.1 vs. uniprot
Match: A0A448Z6X6_9STRA (RING-type domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z6X6_9STRA) HSP 1 Score: 205 bits (522), Expect = 1.050e-51 Identity = 130/340 (38.24%), Postives = 169/340 (49.71%), Query Frame = 3
Query: 639 GDGSAGARWRYRVVCRDGAFVRHGIELTSPFLFNLPWHSVVEVLERRINDAGLPRLK----------------IAEGWISEVLNPLSGQRGPVVEIVKLLQPLQYRVVLPDGAVVRRTVELASSQVKTIAAGELVQVSAKKFSDLG-NRCVQRLKLADGSGWLSMRLNKEPPDDIPVVQYAGL-GDASPSARVTPLPGARSRGQEGTTGLGFWRRSPTVPGSGGXXXXXXXXXXXAPAIKGGAAAVEGDTNDDDDQKADLFKIKHSDSLGEDDNC------------VVCLSGPRTATIVHGEIGHIACCLECARILKARGDACPVCRAPIDSVVQHFWA 1568
G A W +RV C GAFVR G++L + + LP+ S+V V R IN+ GL RL+ + GW SE+LNPLSGQRG V + + P YRV LP GAVVRR +EL S Q++ + G ++V A+ FS+ RC++RL+LA G GW+S+RLN PP D VV+ + D P G L R A++ + N D D +I + E++NC VVCL+ R ATIVHGE GH+ CCL CARILKARGD CPVCR ID V+QHF+A
Sbjct: 412 GPSRASESWIWRVTCPSGAFVREGLDLHTRHIETLPYGSLVRVTRRCINNQGLSRLRTSGYLSLKTHEGNSRVLVTGWCSELLNPLSGQRGIVAQPLPFPVPAIYRVTLPMGAVVRRDIELMSPQIEILPFGSTIKVVARAFSEHPVERCIERLQLAGGGGWISVRLNLPPPQDDLVVELVDIDSDFDPE-------------NPGLYHLNAQR-----------------------AVRAERERERAEHNPSDLSSVDENEISDDSANHEEENCNIDGTQQHSAKCVVCLTSERNATIVHGETGHVVCCLVCARILKARGDKCPVCRLDIDLVIQHFYA 715
BLAST of Ec-00_005790.1 vs. uniprot
Match: A0A7S2KL76_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KL76_9STRA) HSP 1 Score: 202 bits (514), Expect = 1.260e-51 Identity = 122/320 (38.12%), Postives = 169/320 (52.81%), Query Frame = 3
Query: 663 WRYRVVCRDGAFVRHGIELTSPFLFNLPWHSVVEVLERRINDAGLPRLKI----------------AEGWISEVLNPLSGQRGPVVEIVKLLQPLQYRVVLPDGAVVRRTVELASSQVKTIAAGELVQVSAKKFSDLG-NRCVQRLKLADGSGWLSMRLNKEPPDDIPVVQYAGLG-DASPSARVTPLPGARSRGQEGTTGLGFWRRSPTVPGSGGXXXXXXXXXXXAPAIKGGAAAVEGDTNDDDDQKADLFKIKHSDSLGEDDNCVVCLSGPRTATIVHGEIGHIACCLECARILKARGDACPVCRAPIDSVVQHFWA 1568
W +RV R GA+VR G+EL S + LP+ S V V ++ IN GL RLKI EGWISE LNPLSGQ G +V+ + +PL ++V+L +GAV+R VEL+S +++T+ ++V K+F++ ++C++RLKLA G++S+RLN+ PP D+ V + D P S G +I+ A N + + K D+ D C++CL R++TIVHGE GHIACCL CARILKARGD CPVCR PIDSV+QHF+A
Sbjct: 297 WNWRVTYRSGAYVRDGLELNSKQVAVLPFGSFVSVKQKTINAMGLSRLKIKAKVSKTSHGSEDSEVVEGWISEKLNPLSGQSGAIVKSLPFHRPLAFKVILAEGAVIRNGVELSSREIRTVPCDTSLRVICKEFTESPMDKCIERLKLAGDGGYISLRLNRPPPSDVYVCECVSEDIDFDPERPEDYHSLVASEGD---------------------------------SIRAAAVKKRRGNNTEVSNTSSADK----DTQSYDKKCLICLIEERSSTIVHGETGHIACCLACARILKARGDRCPVCRLPIDSVIQHFFA 579 The following BLAST results are available for this feature:
BLAST of Ec-00_005790.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ec-00_005790.1 ID=Ec-00_005790.1|Name=Ec-00_005790.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=419bpback to top spliced messenger RNA >Ec-00_005790.1 ID=Ec-00_005790.1|Name=Ec-00_005790.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=3338bp|location=Sequence derived from alignment at chr_00:9278401..9288144+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon. GACACATTCAGTTGGCGCGCACCTAAGAGAGGGCCCAAGAGGAATAGAACback to top protein sequence of Ec-00_005790.1 >Ec-00_005790.1 ID=Ec-00_005790.1|Name=Ec-00_005790.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=419bp MSTLASQSVSLHATPVGGRERPQGSYVSAETLTNEANFSGETQQWHVIGSback to top mRNA from alignment at chr_00:9278401..9288144+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Ec-00_005790.1 ID=Ec-00_005790.1|Name=Ec-00_005790.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=9744bp|location=Sequence derived from alignment at chr_00:9278401..9288144+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)back to top Coding sequence (CDS) from alignment at chr_00:9278401..9288144+ >Ec-00_005790.1 ID=Ec-00_005790.1|Name=Ec-00_005790.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1257bp|location=Sequence derived from alignment at chr_00:9278401..9288144+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)back to top Synonyms
The feature 'Ec-00_005790.1' has the following synonyms
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