mRNA_Ecto-sp6_S_contig99.18833.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig99.18833.1
Unique NamemRNA_Ecto-sp6_S_contig99.18833.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
BLAST of mRNA_Ecto-sp6_S_contig99.18833.1 vs. uniprot
Match: A0A6H5KC85_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC85_9PHAE)

HSP 1 Score: 605 bits (1560), Expect = 1.590e-209
Identity = 330/405 (81.48%), Postives = 344/405 (84.94%), Query Frame = 1
Query:    1 MWSLGVVTYVLMSRMLPFDADTTEGIQRNILSGRFVFKGSAWAGASEASKHFVRSLLLKSVDLRLTAAGAQKHDWLREAEDLSQTPRKDSTFREEVTRSLLSFREANPMKQLALEVVARTLDPTQIRQLAEEFDRADNNNNGEVSLAEFKRWLEANGAARGMADEDVEASFNSVDVDHSGFIHFNEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDVTLTTGAAANEEESRVLVGHFDMNGDGQISFDEFVNGMRRMGGSSRDGGGLLSIPPAAAPAPPASASGSPREDAATVPEREPGEEQEVGNEAPAREESTNCAEGTGPDGEGEENSKVLTLAETRRPEPHQPEELRDRVNDERGGSAAAGGVDGNLFVVDANGSVHGPPVELDGDDAVTRGGVSA 1215
            MWSLGVVT+ LMSRMLPF+ADT+EGIQRNIL        SAWA ASEASKHFVRSLLLKS DLRLTAAGAQKHDWLREAEDLSQTPRKDSTFREEVT+SLLSFR+ANPMKQLALEVVARTLDPTQIRQLA+EFDRADNNNNGEVSLAEFKRWLEANGAARGMADEDVEASFNSVDVDHSG IHFNEF                                DDVTLTTGAAANEEES+VLVGHFDMNGDGQISF+EFVNGMRRMGGSSRDGGGLLSIPPAAAP  PAS SGSPR DA TVPEREPGEE+EVGN APA+EE  NC EGTG DGEG+ENSKVLTLAETRRPEPHQPE  RDR NDER GSAAAGGVDG++FVVDA+G VHGPPVELDGDDAVTR  VSA
Sbjct:  156 MWSLGVVTHFLMSRMLPFNADTSEGIQRNIL-------WSAWARASEASKHFVRSLLLKSADLRLTAAGAQKHDWLREAEDLSQTPRKDSTFREEVTQSLLSFRDANPMKQLALEVVARTLDPTQIRQLADEFDRADNNNNGEVSLAEFKRWLEANGAARGMADEDVEASFNSVDVDHSGSIHFNEFLAAAIQQRHMDKQSLRPAFDRLDRSHTGFINLDDVTLTTGAAANEEESKVLVGHFDMNGDGQISFEEFVNGMRRMGGSSRDGGGLLSIPPAAAP--PASPSGSPRGDATTVPEREPGEEEEVGNAAPAKEEIPNCTEGTGHDGEGKENSKVLTLAETRRPEPHQPEAPRDRFNDERAGSAAAGGVDGSMFVVDASGDVHGPPVELDGDDAVTRDDVSA 551          
BLAST of mRNA_Ecto-sp6_S_contig99.18833.1 vs. uniprot
Match: D8LT00_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT00_ECTSI)

HSP 1 Score: 501 bits (1291), Expect = 3.360e-174
Identity = 298/303 (98.35%), Postives = 299/303 (98.68%), Query Frame = 1
Query:    1 MWSLGVVTYVLMSRMLPFDADTTEGIQRNILSGRFVFKGSAWAGASEASKHFVRSLLLKSVDLRLTAAGAQKHDWLREAEDLSQTPRKDSTFREEVTRSLLSFREANPMKQLALEVVARTLDPTQIRQLAEEFDRADNNNNGEVSLAEFKRWLEANGAARGMADEDVEASFNSVDVDHSGFIHFNEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDVTLTTGAAANEEESRVLVGHFDMNGDGQISFDEFVNGMRRMGGSSRDGGGLLSIPPAAAPAPPASASGSPREDAATVPEREP 909
            MWSLGVVTYVLMSRMLPFDADTTEGIQRNILSGRFVFKG AWAGASEASKHFVRSLLLKS DLRLTAAGAQKHDWLREAEDLSQTPRKDSTFREEVTRSLLSFREANPMKQLALEVVARTLDPTQIRQLAEEFDRADNNNNGEVSLAEFKRWLEANGAARGMADEDVEASFNSVDVDHSGFIHFNEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDVTLTTGAAANEEESRVLVGHFDMNGDGQISF+EFVNGMRRMGGSSRDGGGLLSIPPAA PAPPASASGSPREDA TVPEREP
Sbjct:   33 MWSLGVVTYVLMSRMLPFDADTTEGIQRNILSGRFVFKGGAWAGASEASKHFVRSLLLKSADLRLTAAGAQKHDWLREAEDLSQTPRKDSTFREEVTRSLLSFREANPMKQLALEVVARTLDPTQIRQLAEEFDRADNNNNGEVSLAEFKRWLEANGAARGMADEDVEASFNSVDVDHSGFIHFNEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDVTLTTGAAANEEESRVLVGHFDMNGDGQISFEEFVNGMRRMGGSSRDGGGLLSIPPAATPAPPASASGSPREDATTVPEREP 335          
BLAST of mRNA_Ecto-sp6_S_contig99.18833.1 vs. uniprot
Match: A0A835YS30_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS30_9STRA)

HSP 1 Score: 122 bits (305), Expect = 7.320e-26
Identity = 96/295 (32.54%), Postives = 138/295 (46.78%), Query Frame = 1
Query:    1 MWSLGVVTYVLMSRMLPFDADTTEGIQRNILSGRFVFKGSAWAGASEASKHFVRSLLLKSVDLRLTAAGAQKHDWLREAEDLSQTPRK------DSTFREEVTRSLLSFREANPMKQLALEVVARTLDPTQIRQLAEEFDRADNNNNGEVSLAEFKRWL-----------EANGAARG-------------------MADEDVEASFNSVDVDHSGFIHFNEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDVTLTTGAAANEEESRVLVGHFDMNGDGQISFDEFVNGM 777
            MWS+GV+ + L+    PF     + +   I   R+ F G AW G S   K F+   L+K+   R+TA  AQ+H WLR     +   R       D   +    R +  F++ N  K++A+EV+A  LDP +   LA EF   D + +G +SL EFK  +            A G+ R                    + +E+ EA F+++D+DHSG I+F EF                  XXXXXXXXXXX    D+ +  GA  + E     +  FD NGDG+I+FDEF + M
Sbjct:  241 MWSIGVIVFALVGNAFPFFDRDPDILASEIKYARYKFAGPAWDGVSPLCKDFIDRCLVKNPKKRMTAPQAQEHPWLRGGTAWANAIRGKAGGGCDGRMKARTRRCMGEFQDNNLFKKVAMEVIAYILDPEETESLAREFIALDKDGDGVLSLPEFKSVIMRHIGSSRYAQSATGSLRNGGSVHGSDAFKAGAHYAASVTEEEAEAIFSALDIDHSGVINFTEFVAGCLGHRHINETTIRCAXXXXXXXXXXXIELRDMLMYVGADVSAEGMEAALRDFDTNGDGKITFDEFRSAM 535          
BLAST of mRNA_Ecto-sp6_S_contig99.18833.1 vs. uniprot
Match: D8LG93_ECTSI (Calcium-dependent protein kinase 2 (PfCDPK2) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG93_ECTSI)

HSP 1 Score: 120 bits (301), Expect = 2.550e-25
Identity = 77/261 (29.50%), Postives = 123/261 (47.13%), Query Frame = 1
Query:    1 MWSLGVVTYVLMSRMLPFDADTTEGIQRNILSGRFVFKGSAWAGASEASKHFVRSLLLKSVDLRLTAAGAQKHDWLREAEDLSQTPRKDSTFREEVTRSLLSFREANPMKQLALEVVARTLDPTQIRQLAEEFDRADNNNNGEVSLAEFKRWLEANGAARGMADEDVEASFNSVDVDHSGFIHFNEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDVTLTTGAAANEEESRVLVGHFDMNGDGQISFDEFVNGMRR 783
            MWS+GV+ Y+L+    PF   +T  ++  I  G + F   AW+  S  +K+F++ LL+++   R++AA AQ H WL   +       KDS   +   ++L++FR+ N +K+LALE+VAR+LD  QIR L ++F + D + +G +SL EF   L +      ++  D+ A F SVD                                             D+    G+   +E    +   FD+N DG+I F EF   MR+
Sbjct:  264 MWSIGVIAYLLLCGYPPFGGSSTAELKEQIQHGTYQFHHEAWSDISGKAKNFIKRLLVRNPQERMSAAEAQHHPWLNNHDPSG----KDSKLSKAAVQNLVNFRQTNALKKLALELVARSLDIEQIRNLEKDFAKMDKDGSGTISLEEFDNVLSSQA---NLSKADIRAIFASVDXXXXXXXXXXXXLAATLERRQLDEMRLKLAFDRLDFDHSGTIDATDLRNIVGSDLGQEGIDEIFKEFDLNKDGEIDFGEFKLAMRK 517          
BLAST of mRNA_Ecto-sp6_S_contig99.18833.1 vs. uniprot
Match: A0A7S1YZ71_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YZ71_9STRA)

HSP 1 Score: 114 bits (284), Expect = 1.460e-24
Identity = 82/268 (30.60%), Postives = 124/268 (46.27%), Query Frame = 1
Query:    1 MWSLGVVTYVLMSRMLPFDADTTEGIQRNILSGRFVFKGSAWAGASEASKHFVRSLLLKSVDLRLTAAGAQKHDWLREAEDLSQTPRKDSTFREEVTRSLLSFREANPMKQLALEVVARTLDPTQIRQLAEEFDRADNNNNGEVSLAEFKRWLEANGAARGMADEDVEASFNSVDVDHSGFIHFNEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD-DVTLTTGAAANEEESRVLVGHFDMNGDGQISFDEFVNGMRRMGGSSR 801
            +WS+GV+TY+L+SR  PF       +   I+   + F G  W G S  ++ FV SL++     RLTA  A KH WL    +LS   R      ++V   L+ +   +  K++AL VVA      ++ +L   FD+ D  N+G ++L EFK  L    +    ++EDVEA F++VDVD +G I++ EF                                  ++    G     E+   ++   D N DG+ISFDEF+ G R    S R
Sbjct:   26 LWSVGVLTYMLLSRQKPFYHRKRRHVIDKIMRCAYDFNGPGWRGISLEAQKFVSSLIVLDPKDRLTADAALKHPWLDRNYNLSDR-RPSQKAMDDVEGRLIRYASQSDFKKMALMVVAHKTTSEEVAELRSVFDQYDTGNDGTITLDEFKMAL----SDSNYSEEDVEALFDNVDVDKNGKIYYTEFLAATLEVVGRIEEDRLAEAFDKIDDDDTGYISGKNLKKLLGKDYTPEKVAEIMKEVDTNKDGKISFDEFLRGFREKNVSLR 288          
BLAST of mRNA_Ecto-sp6_S_contig99.18833.1 vs. uniprot
Match: A0A8K1FQA2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FQA2_PYTOL)

HSP 1 Score: 115 bits (289), Expect = 5.260e-24
Identity = 80/270 (29.63%), Postives = 121/270 (44.81%), Query Frame = 1
Query:    1 MWSLGVVTYVLMSRMLPFDADTTEGIQRNILSGRFVFKGSAWAGASEASKHFVRSLLLKSVDLRLTAAGAQKHDWLREAEDLSQTPRKDSTFREEVTRSLLSFREANPMKQLALEVVARTLDPTQIRQLAEEFDRADNNNNGEVSLAEFKRWLEANGAARGMADEDVEASFNSVDVDHSGFIHFNEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-DDVTLTTGAAANEEESRVLVGHFDMNGDGQISFDEFVNGMRRMGGSSRDG 807
            +WS+GV+TY+L+    PF  DT   I  ++ +GR+ F    WA  S  +K  +  LLL     RLT+    KH WL         P    T +  +   L  F   N +K+ AL V+A  +  T+I +L ++F   D + NG +++ E    L + G   GM +E+V    N +D+D  G + + EF                                 DD+    G+   EE+++ ++   D NGDG I+FDEFV  M R G    DG
Sbjct:  263 LWSIGVITYILLCGYPPFYGDTDPEIFASVRAGRYDFDSPEWADVSAEAKDLISKLLLVDASKRLTSEQVLKHPWLT-----GSAPDTAITLKSGIFNRLKRFTGHNKLKKAALGVIADLMTETEIVELKKQFMAIDKDGNGVITVTELADALRSMG--HGMIEEEVMELLNGIDIDGDGLVDYPEFLAATMKRNLANKKEYLINAFNYFDTKQQGVITKDDLVQFMGS---EEQAQEVIDDVDKNGDGLINFDEFVAMMNRKGFGEDDG 522          
BLAST of mRNA_Ecto-sp6_S_contig99.18833.1 vs. uniprot
Match: A0A6S9DGY3_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9DGY3_9STRA)

HSP 1 Score: 114 bits (286), Expect = 1.200e-23
Identity = 82/268 (30.60%), Postives = 125/268 (46.64%), Query Frame = 1
Query:    1 MWSLGVVTYVLMSRMLPFDADTTEGIQRNILSGRFVFKGSAWAGASEASKHFVRSLLLKSVDLRLTAAGAQKHDWLREAEDLSQTPRKDSTFREEVTRSLLSFREANPMKQLALEVVARTLDPTQIRQLAEEFDRADNNNNGEVSLAEFKRWLEANGAARGMADEDVEASFNSVDVDHSGFIHFNEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD-DVTLTTGAAANEEESRVLVGHFDMNGDGQISFDEFVNGMRRMGGSSR 801
            +WS+GV+TY+L+SR  PF       +   I+   + F G  W G S  ++ FV SL++     RLTA  A KH WL    +LS   R      ++V   L+S+   +  K++AL VVA      ++ +L   FD+ D  ++G ++L EFK  L    +    ++EDVEA F++VDVD +G I++ EF                                  ++    G     E+   ++   D N DG+ISFDEF+ G R    S R
Sbjct:  258 LWSVGVITYMLLSRQKPFYHRKRRHVIDKIMRCAYDFNGPGWRGISLEAQKFVSSLIVLDPKDRLTADAALKHPWLDRNYNLSDR-RPSQKAMDDVEGRLISYASQSDFKKMALMVVAHKTTSEEVAELRSVFDQYDTGSDGTITLDEFKMAL----SDSNYSEEDVEALFDNVDVDKNGKIYYTEFLAATLEVVGRIEEDRLAEAFDKIDDDDTGYISGKNLKKLLGKDYTPEKVAEIMKEVDTNKDGKISFDEFLRGFREKNVSLR 520          
BLAST of mRNA_Ecto-sp6_S_contig99.18833.1 vs. uniprot
Match: C5KM11_PERM5 (Calcium-dependent protein kinase, putative n=8 Tax=Perkinsus TaxID=28000 RepID=C5KM11_PERM5)

HSP 1 Score: 113 bits (282), Expect = 2.140e-23
Identity = 83/272 (30.51%), Postives = 121/272 (44.49%), Query Frame = 1
Query:    4 WSLGVVTYVLMSRMLPFDADTTEGIQRNILSGRFVFKGSAWAGASEASKHFVRSLLLKSVDLRLTAAGAQKHDWLRE--AEDLSQTPRKDSTFREEVTRSLLSFREANPMKQLALEVVARTLDPTQIRQLAEEFDRADNNNNGEVSLAEFKRWLEANGAARGMADEDVEASFNSVDVDHSGFIHFNEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------DDVTLTTGAAANEEESRVLVGHFDMNGDGQISFDEFVNGMRR 783
            WS GV+ YVL+    PF ADT   I R +  G++ F  + W   S+ +K  +R LL      R TA  A  H W++   A+D       D    ++V  SL +FR  N MK++AL V+A+ LD + I +L   F   D NN+G +S+ E K  ++ +G A     ED+E     VD D SG I + EF                                          DDV    G+    +    ++   D+NGDG+I FDEF+  M++
Sbjct:  204 WSCGVIMYVLLCGYPPFYADTDSEILRRVRMGKYSFPDADWKDISDEAKDLIRKLLTYDPGNRWTAEQALNHRWIKTMAAKDFHG----DKNEHKKVVASLKNFRAQNKMKKVALTVIAQQLDESDIGKLKSTFQALDKNNDGMLSVQEVKEGMQKSGVA---LPEDLEEIMKEVDSDGSGAIDYTEFIAATMDKKLYIQKDVCWAAFRVFDRDGNGKISREELQDVLGNDDVRTALGSDLVTQ----MINEVDLNGDGEIDFDEFMQMMQK 464          
BLAST of mRNA_Ecto-sp6_S_contig99.18833.1 vs. uniprot
Match: A0A5D6XJN2_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJN2_9STRA)

HSP 1 Score: 111 bits (278), Expect = 4.170e-23
Identity = 76/264 (28.79%), Postives = 120/264 (45.45%), Query Frame = 1
Query:    1 MWSLGVVTYVLMSRMLPFDADTTEGIQRNILSGRFVFKGSAWAGASEASKHFVRSLLLKSVDLRLTAAGAQKHDWLREAEDLSQTPRKDSTFREEVTRSLLSFREANPMKQLALEVVARTLDPTQIRQLAEEFDRADNNNNGEVSLAEFKRWLEANGAARGMADEDVEASFNSVDVDHSGFIHFNEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD-DVTLTTGAAANEEESRVLVGHFDMNGDGQISFDEFVNGMRRMG 789
            +WS+GV+TY+L+    PF  DT   I  ++ +GR+ F    W   S  +K  +  LLL     RLTA  A +H WL         P  +      +  SL  F   N +K+ AL V+A  +  T+I +L ++F   D + NG +++AE    L + G   GM +E+V      +D+D  G + + EF                                  D+    G+   E++++ ++   D+NGDG ISFDEF+  M+R G
Sbjct:  123 LWSIGVITYILLCGYPPFYGDTDPEIFASVRAGRYDFDSPEWTTVSAEAKDLISRLLLLDAAKRLTADEALRHPWLS-----GSAPSTEIALNSTIFSSLKRFTGNNKLKKAALAVIADQMTETEIVELKKQFMAIDADGNGVITVAELADALRSMG--HGMIEEEVTELLKGIDIDGDGLVDYPEFLAATMKRNLANKEEYLVNAFNYFDTKRQGVITKADLVQFMGS---EDQAQEVIDEVDVNGDGLISFDEFIGMMQRKG 376          
BLAST of mRNA_Ecto-sp6_S_contig99.18833.1 vs. uniprot
Match: A0A7J6PYS0_PEROL (Uncharacterized protein n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6PYS0_PEROL)

HSP 1 Score: 107 bits (266), Expect = 9.610e-23
Identity = 79/255 (30.98%), Postives = 114/255 (44.71%), Query Frame = 1
Query:   25 YVLMSRMLPFDADTTEGIQRNILSGRFVFKGSAWAGASEASKHFVRSLLLKSVDLRLTAAGAQKHDWLRE--AEDLSQTPRKDSTFREEVTRSLLSFREANPMKQLALEVVARTLDPTQIRQLAEEFDRADNNNNGEVSLAEFKRWLEANGAARGMADEDVEASFNSVDVDHSGFIHFNEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDVTLTTGAAANEEESRVLVGHFDMNGDGQISFDEFVNGMRR 783
            Y+L+    PF AD    I + +  G++ F    W   S+ +K  +R LL      R TA  A KH W+R   A D       D    ++V  SL +FR  N MK++AL V+A+ LD + I +L   F   D NN+G +S+ E K  +E +G A     ED+E     VD D SG I + EF                                DDV    G+    +    ++   D+NGDG+I FDEF+  M++
Sbjct:    1 YILLCGYPPFYADNDTDILKRVRRGKYTFPDEDWKDISDDAKDLIRKLLTYDQGNRWTAEQALKHRWIRTMAATDFHG----DKNDHKKVVASLKNFRAQNKMKKVALTVIAQQLDESDIGKLKATFQALDENNDGMLSVQEIKEGMEKSGVA---LPEDLEEIMKEVDSDGSGAIDYTEFIAATMDKKLVFDRDGNGKISKEELQEVLGN--DDVRTALGSDLVTQ----MINEVDLNGDGEIDFDEFMQMMQK 242          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig99.18833.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KC85_9PHAE1.590e-20981.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LT00_ECTSI3.360e-17498.35N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepI... [more]
A0A835YS30_9STRA7.320e-2632.54Kinase-like domain-containing protein n=1 Tax=Trib... [more]
D8LG93_ECTSI2.550e-2529.50Calcium-dependent protein kinase 2 (PfCDPK2) n=1 T... [more]
A0A7S1YZ71_9STRA1.460e-2430.60Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A8K1FQA2_PYTOL5.260e-2429.63Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A6S9DGY3_9STRA1.200e-2330.60Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
C5KM11_PERM52.140e-2330.51Calcium-dependent protein kinase, putative n=8 Tax... [more]
A0A5D6XJN2_9STRA4.170e-2328.79Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A7J6PYS0_PEROL9.610e-2330.98Uncharacterized protein n=1 Tax=Perkinsus olseni T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig99contigEcto-sp6_S_contig99:227632..230921 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score124.8
Seed ortholog evalue9.8e-26
Seed eggNOG ortholog2880.D8LG93
Model size1461
KEGG koko:K13412
KEGG Pathwayko04626,ko05145,map04626,map05145
Hectar predicted targeting categoryother localisation
GOsGO:0000165,GO:0000187,GO:0001817,GO:0001932,GO:0001934,GO:0002218,GO:0002221,GO:0002224,GO:0002237,GO:0002253,GO:0002376,GO:0002682,GO:0002684,GO:0002757,GO:0002758,GO:0002764,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004683,GO:0005488,GO:0005515,GO:0005516,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0006082,GO:0006464,GO:0006468,GO:0006690,GO:0006691,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006897,GO:0006907,GO:0006950,GO:0006952,GO:0006954,GO:0006974,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0008150,GO:0008152,GO:0009605,GO:0009607,GO:0009617,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009931,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010468,GO:0010562,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010646,GO:0010647,GO:0010857,GO:0015630,GO:0016192,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018105,GO:0018193,GO:0018209,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0019752,GO:0019899,GO:0019900,GO:0019901,GO:0023014,GO:0023051,GO:0023052,GO:0023056,GO:0031323,GO:0031324,GO:0031325,GO:0031329,GO:0031330,GO:0031347,GO:0031349,GO:0031399,GO:0031401,GO:0031974,GO:0031981,GO:0032147,GO:0032268,GO:0032270,GO:0032496,GO:0032675,GO:0032680,GO:0033554,GO:0033674,GO:0033993,GO:0034097,GO:0035556,GO:0035924,GO:0036211,GO:0042221,GO:0042325,GO:0042327,GO:0043085,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043405,GO:0043406,GO:0043408,GO:0043410,GO:0043412,GO:0043436,GO:0043487,GO:0043488,GO:0043489,GO:0043549,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044281,GO:0044351,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0045088,GO:0045089,GO:0045859,GO:0045860,GO:0045934,GO:0045937,GO:0046777,GO:0048010,GO:0048255,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0050776,GO:0050778,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051019,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051239,GO:0051246,GO:0051247,GO:0051252,GO:0051253,GO:0051338,GO:0051347,GO:0051704,GO:0051707,GO:0051716,GO:0060255,GO:0061013,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070848,GO:0070887,GO:0070935,GO:0071310,GO:0071363,GO:0071704,GO:0071900,GO:0071902,GO:0080090,GO:0080134,GO:0080135,GO:0098657,GO:0140096,GO:1900034,GO:1901564,GO:1901568,GO:1901700,GO:1902369,GO:1902373,GO:1902531,GO:1902533,GO:1903311,GO:1903312,GO:1903555
Exons7
EggNOG free text desc.protein serine/threonine kinase activity
EggNOG OGsKOG0032@1,KOG0032@2759
EC2.7.11.1
Cds size1284
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig99.18833.1prot_Ecto-sp6_S_contig99.18833.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig99 227632..230744 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350610.0846763-CDS-Ecto-sp6_S_contig99:227631..2277251682350610.0846763-CDS-Ecto-sp6_S_contig99:227631..227725Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig99 227632..227725 +
1682350610.0985816-CDS-Ecto-sp6_S_contig99:227942..2281591682350610.0985816-CDS-Ecto-sp6_S_contig99:227942..228159Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig99 227943..228159 +
1682350610.108504-CDS-Ecto-sp6_S_contig99:228566..2286841682350610.108504-CDS-Ecto-sp6_S_contig99:228566..228684Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig99 228567..228684 +
1682350610.1184697-CDS-Ecto-sp6_S_contig99:228864..2289731682350610.1184697-CDS-Ecto-sp6_S_contig99:228864..228973Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig99 228865..228973 +
1682350610.1283288-CDS-Ecto-sp6_S_contig99:229517..2297261682350610.1283288-CDS-Ecto-sp6_S_contig99:229517..229726Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig99 229518..229726 +
1682350610.138239-CDS-Ecto-sp6_S_contig99:230149..2306561682350610.138239-CDS-Ecto-sp6_S_contig99:230149..230656Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig99 230150..230656 +
1682350610.1485777-CDS-Ecto-sp6_S_contig99:230714..2307441682350610.1485777-CDS-Ecto-sp6_S_contig99:230714..230744Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig99 230715..230744 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350610.1587543-UTR-Ecto-sp6_S_contig99:230744..2309211682350610.1587543-UTR-Ecto-sp6_S_contig99:230744..230921Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig99 230745..230921 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig99.18833.1

>prot_Ecto-sp6_S_contig99.18833.1 ID=prot_Ecto-sp6_S_contig99.18833.1|Name=mRNA_Ecto-sp6_S_contig99.18833.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=428bp
MWSLGVVTYVLMSRMLPFDADTTEGIQRNILSGRFVFKGSAWAGASEASK
HFVRSLLLKSVDLRLTAAGAQKHDWLREAEDLSQTPRKDSTFREEVTRSL
LSFREANPMKQLALEVVARTLDPTQIRQLAEEFDRADNNNNGEVSLAEFK
RWLEANGAARGMADEDVEASFNSVDVDHSGFIHFNEFLAATIQQRHMDEQ
SLRPAFDRLDRSHTGFINLDDVTLTTGAAANEEESRVLVGHFDMNGDGQI
SFDEFVNGMRRMGGSSRDGGGLLSIPPAAAPAPPASASGSPREDAATVPE
REPGEEQEVGNEAPAREESTNCAEGTGPDGEGEENSKVLTLAETRRPEPH
QPEELRDRVNDERGGSAAAGGVDGNLFVVDANGSVHGPPVELDGDDAVTR
GGVSAAAASAATAAAAAAQPMVASKPQ*
back to top

mRNA from alignment at Ecto-sp6_S_contig99:227632..230921+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig99.18833.1 ID=mRNA_Ecto-sp6_S_contig99.18833.1|Name=mRNA_Ecto-sp6_S_contig99.18833.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=3290bp|location=Sequence derived from alignment at Ecto-sp6_S_contig99:227632..230921+ (Ectocarpus species6 EcLAC_371)
ATGTGGAGTCTTGGGGTCGTCACCTACGTCCTGATGAGCCGCATGCTACC GTTCGACGCCGACACCACGGAGGGAATACAACGCAACATCTTGTGTGAGT CTTGGCGAACTAATGTTGCCTCTAAATTTTGAGCTGGCGTTGTCTTTGTC GTTGTTGGCTGTTGGCTCCTCTCTTGGTACTTGTTGCTTCTGTTCGTACT TGAGTAGTTAGTTTCTAGCGGTGCTATCATGCGGTTGCTGTACTGGCCCT CATTCTAGCCCTTCTCATTATTCCCACTGTTTCCCGTTCAATTGGCCACG TTTGTTTCCAGCTGGGAGGTTCGTCTTCAAAGGGAGTGCGTGGGCTGGGG CGAGCGAGGCGTCCAAGCACTTCGTGCGATCCCTCCTGCTCAAGAGTGTC GACCTGCGCCTCACGGCGGCGGGGGCCCAGAAGCACGATTGGCTTCGAGA GGCAGAGGACTTGTCTCAAACTCCGCGGAAGGACTCGACCTTTCGCGAGG AGGTCACGCGATCGCTGCTCAGCTTTAGGTGGGAGAAATTCGAAGGGGGT TCCATTGGCCAAGTCATTGGTGGTGTGCAAGCTCTTGACTAGCTTTTCGA CGACTATGGCCCCAGTCGTGGTCAATGTGCTCTAGGAGCCGTTTCCGTAG GCTATGGGGCGGCATGACTGAAGAACCATCGCGCACTTGCAACGTCGAAC GCGTTGGAAACTCGTTCGCCTCCGCCGCCGCCCGGCCGTCTGTGTGCGGC ATCCGCGTGCGTCGTGTGCGGGATTCGCTTGTGGTTTTGTTCGCCCCCTC CCTACCCGCCCCCTCCCCCGCTAGCCTCAGCTGGCGAAAACCCGGCATAT CGCCCCGTACTGGCGTTGTAGGGATGCGAGGTCAATGGTCGAACTACTAC GGCATGCGTTTACGTGAACCCCCCCCACCCGACAGGGAAGCGAACCCGAT GAAGCAGCTAGCGCTAGAGGTAGTGGCGCGCACCCTGGACCCGACGCAGA TACGCCAGCTGGCCGAGGAGTTCGACCGCGCCGACAACAACAACAATGGC GAGGTGGGCGATCCCCCGTCAGAAGTTACATGTTTAGTGCTTATGTTCTT TTCTGCAAGCCACTTCTTGTTTGACAATCACGTGTGTGCAAACCACCGCC GTATGGTCCGGTTTCGTCAGGCAGCTTCCCGTGAAACACGTGACGTGATC TTCGTCTCTGCCCATTGCCGCCGATATTACAAGGTGTCTCTTGCTGAGTT TAAGCGATGGCTGGAGGCCAACGGTGCGGCCAGAGGCATGGCCGACGAGG ACGTGGAGGCGTCGTTTAACTCAGTGGACGTCGACCACTCCGGTACGGTT GGTGCAGACGAAATCGATGCTTTATGAAACGAACGCATGCGACGTCGATA CGCATCTTTGGGATGGCATCAAACCGCGGCGTGGTACACGATGAGCTGTA TGTCGGGGCAGCGTGGCGCCACTCGCAGAGTGGGTTCGTTTTTTCATTAT CTTCTCTTGCCAATATGATGATTTTTGTCAACTTGGCAACGTACTCCCCG CCGTAACACAATGTTTTCGAGGACATTCCCTAAAACGCTAGTACGACAAG GGTCAACGTCGTGGTTGACAACGTTTTCGGTTTTCTGCTCTTGTGCGCCT GTGTTGGCGACCTGTTCGTGCGATGCCCGTCTTGCCTCAGCAATCTTGCA ACTCTTCGTTTGCCAGCATCCGGCAGGATGCTTTCACGCCAAACGTTTGG AACATTGGCGGGCACCTGTATCCCTACCTTTCGGGGGTGCATAATAGATT TCTGCCCCTCGTTTCGAGAACCAACCAGAACTACCACGCCAAAGTACTTC CCCGCCGCCTCTCTTGCCGTCGTCGGTGCCTCTCAGGTTTCATACACTTC AACGAGTTTCTCGCCGCGACGATCCAGCAGCGGCACATGGACGAACAGTC CCTGCGGCCGGCGTTCGATCGCCTCGACCGCAGCCACACAGGCTTCATTA ACCTCGACGACGTTACGCTCACCACGGGGGCCGCGGCCAACGAGGAGGAG TCGAGAGTCCTCGTGGGGCACTTCGACATGAACGGAGACGGACAAGTAAG CGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCGGACC TGTAGCACGCGCTGTGTAGGAGCAGAACGTGTAAGCAACCCGGCAGGATA GGTACCTCTATGTGTCTAGGAATTGTTTTACATTCGTGAGCCCGGTTTTC ATAGGGCGGTTGCCCGGTGTAGCGTGGGTGAGAAATATCTTGGCACAGAC AAATAGAAAAGTAAAGTAGTTGTAAACCCCGAATTAAAGGGCGGGTGCCC ACTATAGGGCGGGTGGATCGGCCTGGCGCGTATCCGCCCATTCGAAGTCC CACGACTGTTTTTCAACGACCACTTGGGACAAATTACAGTTGCTGTCTTG AACTCGAGTCGCATCGTCTTCCCCGGCTGAGCTTGCGACCCCGTGTTGCC CCCCCCCGGCGTCCGCAGATCAGCTTCGACGAGTTCGTGAACGGCATGCG AAGAATGGGAGGCTCGTCACGAGACGGGGGGGGGCTGCTGTCGATACCCC CAGCTGCCGCCCCCGCCCCCCCCGCCTCTGCCTCGGGCAGCCCGCGGGAA GATGCCGCGACCGTACCAGAGAGGGAACCGGGTGAGGAGCAGGAAGTGGG AAATGAAGCCCCTGCGAGAGAAGAGAGCACAAACTGCGCAGAAGGGACAG GACCCGACGGAGAAGGCGAAGAAAACTCTAAAGTCTTGACTTTGGCGGAA ACGCGAAGGCCCGAGCCGCACCAGCCCGAAGAGCTGAGAGATAGGGTCAA CGACGAGCGTGGTGGGAGCGCGGCCGCGGGAGGAGTTGATGGGAACCTGT TCGTGGTCGACGCCAATGGTAGTGTCCATGGCCCGCCGGTTGAGCTTGAT GGGGATGACGCGGTGACACGGGGTGGTGTTTCCGCTGCTGCCGCCAGCGC AGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCGATGGTAGCGTCC AAGCCACAGCTGCGCTGGCGGCAGCAGCGGCAGCAgccgatGGTAGCGtc caagccacAGtaGATCGCGAGGCGGCCAGCGAGGAGGCCCTCGCCTCGGC ACCCAAAGTCGTTACCGACGGGAGCATGCAAGCGTCGCAGGAGGACCAAC AACGTATCGGGACAGACGGTCCGTCGGAGGAGGGGGACGGTGTGGGGATC TCGCGGGACCCCCGGGGGGATGACATCGCAGCAGCAGCAG
back to top

Coding sequence (CDS) from alignment at Ecto-sp6_S_contig99:227632..230921+

>mRNA_Ecto-sp6_S_contig99.18833.1 ID=mRNA_Ecto-sp6_S_contig99.18833.1|Name=mRNA_Ecto-sp6_S_contig99.18833.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1284bp|location=Sequence derived from alignment at Ecto-sp6_S_contig99:227632..230921+ (Ectocarpus species6 EcLAC_371)
ATGTGGAGTCTTGGGGTCGTCACCTACGTCCTGATGAGCCGCATGCTACC
GTTCGACGCCGACACCACGGAGGGAATACAACGCAACATCTTGTCTGGGA
GGTTCGTCTTCAAAGGGAGTGCGTGGGCTGGGGCGAGCGAGGCGTCCAAG
CACTTCGTGCGATCCCTCCTGCTCAAGAGTGTCGACCTGCGCCTCACGGC
GGCGGGGGCCCAGAAGCACGATTGGCTTCGAGAGGCAGAGGACTTGTCTC
AAACTCCGCGGAAGGACTCGACCTTTCGCGAGGAGGTCACGCGATCGCTG
CTCAGCTTTAGGGAAGCGAACCCGATGAAGCAGCTAGCGCTAGAGGTAGT
GGCGCGCACCCTGGACCCGACGCAGATACGCCAGCTGGCCGAGGAGTTCG
ACCGCGCCGACAACAACAACAATGGCGAGGTGTCTCTTGCTGAGTTTAAG
CGATGGCTGGAGGCCAACGGTGCGGCCAGAGGCATGGCCGACGAGGACGT
GGAGGCGTCGTTTAACTCAGTGGACGTCGACCACTCCGGTTTCATACACT
TCAACGAGTTTCTCGCCGCGACGATCCAGCAGCGGCACATGGACGAACAG
TCCCTGCGGCCGGCGTTCGATCGCCTCGACCGCAGCCACACAGGCTTCAT
TAACCTCGACGACGTTACGCTCACCACGGGGGCCGCGGCCAACGAGGAGG
AGTCGAGAGTCCTCGTGGGGCACTTCGACATGAACGGAGACGGACAAATC
AGCTTCGACGAGTTCGTGAACGGCATGCGAAGAATGGGAGGCTCGTCACG
AGACGGGGGGGGGCTGCTGTCGATACCCCCAGCTGCCGCCCCCGCCCCCC
CCGCCTCTGCCTCGGGCAGCCCGCGGGAAGATGCCGCGACCGTACCAGAG
AGGGAACCGGGTGAGGAGCAGGAAGTGGGAAATGAAGCCCCTGCGAGAGA
AGAGAGCACAAACTGCGCAGAAGGGACAGGACCCGACGGAGAAGGCGAAG
AAAACTCTAAAGTCTTGACTTTGGCGGAAACGCGAAGGCCCGAGCCGCAC
CAGCCCGAAGAGCTGAGAGATAGGGTCAACGACGAGCGTGGTGGGAGCGC
GGCCGCGGGAGGAGTTGATGGGAACCTGTTCGTGGTCGACGCCAATGGTA
GTGTCCATGGCCCGCCGGTTGAGCTTGATGGGGATGACGCGGTGACACGG
GGTGGTGTTTCCGCTGCTGCCGCCAGCGCAGCAACAGCAGCAGCAGCAGC
AGCACAgccgatGGTAGCGtccaagccacAGtaG
back to top