prot_Ecto-sp6_S_contig99.18817.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig99.18817.1
Unique Nameprot_Ecto-sp6_S_contig99.18817.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length140
Homology
BLAST of mRNA_Ecto-sp6_S_contig99.18817.1 vs. uniprot
Match: A0A6H5JH58_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH58_9PHAE)

HSP 1 Score: 202 bits (514), Expect = 1.420e-57
Identity = 102/140 (72.86%), Postives = 122/140 (87.14%), Query Frame = 0
Query:    1 MDSGERRTLECRSKVQQGDGMGPPLFFLILVPIIIKLQKKYEPLGVSIKAYMDDINLHLQELTEESLKALSDLEDELTEVGKIVSRRKSSALPPQGHQITDKRKRLLDGAGITVAEAGITLVGVPIGSDAYVEECAIKVI 140
            MDSGERRTLEC S VQQGDGMGPPLF LIL+PII+KLQ KY+PLGV+ KAYMDDI LHL++LTEES++A++DL DEL EVG +V+R KSSALPP GH ITD+++RLL+G G+TVA  GIT+VGVPIG+D YV E A+KVI
Sbjct:  724 MDSGERRTLECTSGVQQGDGMGPPLFSLILIPIILKLQDKYKPLGVAFKAYMDDITLHLKDLTEESVQAMTDLVDELAEVGIVVNRAKSSALPPPGHMITDQQRRLLEGVGLTVAGEGITVVGVPIGTDNYVREFAMKVI 863          
BLAST of mRNA_Ecto-sp6_S_contig99.18817.1 vs. uniprot
Match: A0A6H5KDD0_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDD0_9PHAE)

HSP 1 Score: 185 bits (469), Expect = 5.370e-54
Identity = 91/140 (65.00%), Postives = 115/140 (82.14%), Query Frame = 0
Query:    1 MDSGERRTLECRSKVQQGDGMGPPLFFLILVPIIIKLQKKYEPLGVSIKAYMDDINLHLQELTEESLKALSDLEDELTEVGKIVSRRKSSALPPQGHQITDKRKRLLDGAGITVAEAGITLVGVPIGSDAYVEECAIKVI 140
            MDSGERRT+EC+S VQQGDGMGPPLFF IL PI++KL+ KY+ LGVS+KAYMDDI+LH + +T E+++ + DL DEL  VG IV+R KSSALPP GH +T   +RLL  AG+ +AE GIT+VGVPIG+DAYVE+ A+KV+
Sbjct:  142 MDSGERRTIECKSGVQQGDGMGPPLFFFILFPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEEGITVVGVPIGTDAYVEDIAMKVL 281          
BLAST of mRNA_Ecto-sp6_S_contig99.18817.1 vs. uniprot
Match: A0A6H5J7C4_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7C4_9PHAE)

HSP 1 Score: 181 bits (459), Expect = 1.650e-53
Identity = 90/140 (64.29%), Postives = 113/140 (80.71%), Query Frame = 0
Query:    1 MDSGERRTLECRSKVQQGDGMGPPLFFLILVPIIIKLQKKYEPLGVSIKAYMDDINLHLQELTEESLKALSDLEDELTEVGKIVSRRKSSALPPQGHQITDKRKRLLDGAGITVAEAGITLVGVPIGSDAYVEECAIKVI 140
            MDSGERRT+EC+S VQQGDGMGPPLF  ILVPI++KL+ KY+ LGV +K+YMDDI+LH + +T E+++ + DL DEL  VG IV+R KSSALPP GH +T   +RLL  AG+ +AE GIT+VGVPIG DAYVE+ A+KVI
Sbjct:    1 MDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKSYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEEGITVVGVPIGKDAYVEDIAMKVI 140          
BLAST of mRNA_Ecto-sp6_S_contig99.18817.1 vs. uniprot
Match: A0A6H5KR59_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR59_9PHAE)

HSP 1 Score: 179 bits (454), Expect = 4.970e-52
Identity = 90/140 (64.29%), Postives = 112/140 (80.00%), Query Frame = 0
Query:    1 MDSGERRTLECRSKVQQGDGMGPPLFFLILVPIIIKLQKKYEPLGVSIKAYMDDINLHLQELTEESLKALSDLEDELTEVGKIVSRRKSSALPPQGHQITDKRKRLLDGAGITVAEAGITLVGVPIGSDAYVEECAIKVI 140
            MDSG RRT+EC+  VQQGDGMGPPLF  ILVPII+KL+ KY+ LGV +KAYMDDI+LH + +T E+++ + DL DEL  VG IV+R KSSALPP GH +T   +RLL  AG+ +AE GIT+VGVPIG+DAYVE+ A+KVI
Sbjct:  276 MDSGARRTIECKGGVQQGDGMGPPLFCFILVPIILKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEEGITVVGVPIGTDAYVEDIAMKVI 415          
BLAST of mRNA_Ecto-sp6_S_contig99.18817.1 vs. uniprot
Match: A0A6H5KYJ9_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYJ9_9PHAE)

HSP 1 Score: 181 bits (460), Expect = 5.010e-51
Identity = 90/140 (64.29%), Postives = 114/140 (81.43%), Query Frame = 0
Query:    1 MDSGERRTLECRSKVQQGDGMGPPLFFLILVPIIIKLQKKYEPLGVSIKAYMDDINLHLQELTEESLKALSDLEDELTEVGKIVSRRKSSALPPQGHQITDKRKRLLDGAGITVAEAGITLVGVPIGSDAYVEECAIKVI 140
            MDSGERRT+EC+S VQQGDGMGPPLF  ILVPI++KL+ KY+ LGV +KAYMDDI+LH + +T E+++ + D+ DEL  VG IV+R KSSALPP GH +T   +RLL  AG+ +AE GIT+VGVPIG+DAYVE+ A+KVI
Sbjct:  101 MDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDVVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEEGITVVGVPIGTDAYVEDIAMKVI 240          
BLAST of mRNA_Ecto-sp6_S_contig99.18817.1 vs. uniprot
Match: A0A6H5KMQ2_9PHAE (Reverse transcriptase domain-containing protein n=16 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ2_9PHAE)

HSP 1 Score: 182 bits (463), Expect = 1.010e-50
Identity = 91/140 (65.00%), Postives = 114/140 (81.43%), Query Frame = 0
Query:    1 MDSGERRTLECRSKVQQGDGMGPPLFFLILVPIIIKLQKKYEPLGVSIKAYMDDINLHLQELTEESLKALSDLEDELTEVGKIVSRRKSSALPPQGHQITDKRKRLLDGAGITVAEAGITLVGVPIGSDAYVEECAIKVI 140
            MDSGERRT+EC+S VQQGDGMGPPLF  ILVPI++KL+ KY+ LGV +KAYMDDI+LH + +T E+++ + DL DEL  VG IV+R KSSALPP GH +T   +RLL  AG+ +AE GIT+VGVPIG+DAYVE+ A+KVI
Sbjct:  554 MDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEEGITVVGVPIGTDAYVEDIAMKVI 693          
BLAST of mRNA_Ecto-sp6_S_contig99.18817.1 vs. uniprot
Match: A0A6H5JHZ7_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHZ7_9PHAE)

HSP 1 Score: 179 bits (454), Expect = 1.660e-50
Identity = 89/139 (64.03%), Postives = 112/139 (80.58%), Query Frame = 0
Query:    1 MDSGERRTLECRSKVQQGDGMGPPLFFLILVPIIIKLQKKYEPLGVSIKAYMDDINLHLQELTEESLKALSDLEDELTEVGKIVSRRKSSALPPQGHQITDKRKRLLDGAGITVAEAGITLVGVPIGSDAYVEECAIKV 139
            MDSGERRT+EC+S VQQGDGMGPPLF  ILVPI++KL+ KY+ LGV +KAYMDDI+LH + +T E+++ + DL DEL  VG IV+R KSSALPP GH +T   +RLL  AG+ +AE GIT+VGVPIG+D YVE+ A+KV
Sbjct:   30 MDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAGRRLLGDAGLPIAEEGITVVGVPIGTDVYVEDIAMKV 168          
BLAST of mRNA_Ecto-sp6_S_contig99.18817.1 vs. uniprot
Match: A0A6H5KKQ2_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKQ2_9PHAE)

HSP 1 Score: 179 bits (455), Expect = 4.650e-50
Identity = 90/140 (64.29%), Postives = 113/140 (80.71%), Query Frame = 0
Query:    1 MDSGERRTLECRSKVQQGDGMGPPLFFLILVPIIIKLQKKYEPLGVSIKAYMDDINLHLQELTEESLKALSDLEDELTEVGKIVSRRKSSALPPQGHQITDKRKRLLDGAGITVAEAGITLVGVPIGSDAYVEECAIKVI 140
            MDSGERRT+EC+S VQQGDGMGPPLF  ILVPI++KL+ KY+ LGV +KAYMDDI+LH +++T E+++   DL DEL  VG IV+R KSSALPP GH +T   +R L  AG+ +AE GIT+VGVPIG+DAYVE+ A+KVI
Sbjct:  553 MDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKDITAENIQVTPDLVDELEAVGIIVNRGKSSALPPPGHDVTPTERRPLGDAGLPIAEEGITVVGVPIGTDAYVEDIAMKVI 692          
BLAST of mRNA_Ecto-sp6_S_contig99.18817.1 vs. uniprot
Match: A0A6H5JLG6_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLG6_9PHAE)

HSP 1 Score: 180 bits (457), Expect = 4.780e-50
Identity = 90/140 (64.29%), Postives = 114/140 (81.43%), Query Frame = 0
Query:    1 MDSGERRTLECRSKVQQGDGMGPPLFFLILVPIIIKLQKKYEPLGVSIKAYMDDINLHLQELTEESLKALSDLEDELTEVGKIVSRRKSSALPPQGHQITDKRKRLLDGAGITVAEAGITLVGVPIGSDAYVEECAIKVI 140
            MDSGERRT+EC+S VQQGDGMGPPLF  ILVPI+ K++ KY+ LGVS+KAY+DDI+LH + +T E+++ + DL DEL  VG IV+R KSSALPP GH +T   +RLL  AG+ +AE GIT+VGVPIG+DAYVE+ A+KVI
Sbjct:  193 MDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVSKVRAKYDHLGVSLKAYVDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEEGITVVGVPIGTDAYVEDIAMKVI 332          
BLAST of mRNA_Ecto-sp6_S_contig99.18817.1 vs. uniprot
Match: A0A6H5KJC0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJC0_9PHAE)

HSP 1 Score: 178 bits (452), Expect = 1.350e-49
Identity = 90/140 (64.29%), Postives = 113/140 (80.71%), Query Frame = 0
Query:    1 MDSGERRTLECRSKVQQGDGMGPPLFFLILVPIIIKLQKKYEPLGVSIKAYMDDINLHLQELTEESLKALSDLEDELTEVGKIVSRRKSSALPPQGHQITDKRKRLLDGAGITVAEAGITLVGVPIGSDAYVEECAIKVI 140
            MDSGERRT+EC+S VQQGDGMGPPLF  ILVPI++KL+ KY+ LGVS+KAYMDDI+LH + +T E ++ + DL +EL  VG IV+R KSSALPP GH +T   +RLL  AG+ +AE GIT+VGVPI +DAYVE+ A+KVI
Sbjct:  580 MDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAEFIQVIPDLVNELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEEGITVVGVPIETDAYVEDIAMKVI 719          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig99.18817.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JH58_9PHAE1.420e-5772.86Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KDD0_9PHAE5.370e-5465.00Reverse transcriptase domain-containing protein n=... [more]
A0A6H5J7C4_9PHAE1.650e-5364.29Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KR59_9PHAE4.970e-5264.29Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KYJ9_9PHAE5.010e-5164.29Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KMQ2_9PHAE1.010e-5065.00Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JHZ7_9PHAE1.660e-5064.03Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KKQ2_9PHAE4.650e-5064.29Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JLG6_9PHAE4.780e-5064.29Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KJC0_9PHAE1.350e-4964.29Reverse transcriptase domain-containing protein (F... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 7..92
e-value: 6.0E-8
score: 32.5
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 1..114
score: 8.753
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 38..140
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig99contigEcto-sp6_S_contig99:79257..79676 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig99.18817.1mRNA_Ecto-sp6_S_contig99.18817.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig99 79257..79676 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig99.18817.1 ID=prot_Ecto-sp6_S_contig99.18817.1|Name=mRNA_Ecto-sp6_S_contig99.18817.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=140bp
MDSGERRTLECRSKVQQGDGMGPPLFFLILVPIIIKLQKKYEPLGVSIKA
YMDDINLHLQELTEESLKALSDLEDELTEVGKIVSRRKSSALPPQGHQIT
DKRKRLLDGAGITVAEAGITLVGVPIGSDAYVEECAIKVI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom