mRNA_Ecto-sp6_S_contig98.18794.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig98.18794.1 vs. uniprot
Match: D8LEM4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEM4_ECTSI) HSP 1 Score: 528 bits (1361), Expect = 9.330e-177 Identity = 302/319 (94.67%), Postives = 307/319 (96.24%), Query Frame = 1
Query: 1138 SKETTGTTPRQAPTVAAGVPQGETRAPSNVDKTGANKAWQGRKATKDRDSTDGGDKNSSSKKCRGSNGGKGKDNPGEVSKCNATKEDLPTTVSVETTVSSLRSPTSAAATKPLSSPPNRSGDTAGMAPSVEFHLLRQAREAAKKEAAXSGGGRRPRAPSRRALEASGQLKHDGAQWMTRERKAEEARFKAELREQRRQYKAAGLKSGVVLEAFVAEAAGTGTVGDGVGGGVAGEIGVGSATTKHGRDPAWQKVSPEMFAASPEQEQATKQEEALSPSSERPSKRPRPPAAPNSTPRSESPNMVEDLSGILDGPSSNGVA 2094
SK+TTGTTPRQAPTVAAGVPQGE RAPSNVDKTGANKAWQGRKATKDRDSTDGGDKNSSSKK RGSNGGK DN GEVSK NAT+EDLPTTVSVETTVSSLRSPTSAAATKPLSSPPNRSGDTAGMAPSVEFHLLRQARE AKKEAA SGGGRRPRAPSRRALEASGQLKHDGAQWMTRERKAEEARFKAELREQRRQYKAAGLKSGVVLEAFVAEAAGTGT GDGVGGGVAGE+GVGSATTKHGRDPAWQKVSP + AASPEQEQAT+QEE LSPSSERPSKRPRPPAAPNSTPRSESPNMVEDLSGILDGPSSNGVA
Sbjct: 56 SKKTTGTTPRQAPTVAAGVPQGEARAPSNVDKTGANKAWQGRKATKDRDSTDGGDKNSSSKKRRGSNGGK--DNRGEVSKVNATREDLPTTVSVETTVSSLRSPTSAAATKPLSSPPNRSGDTAGMAPSVEFHLLRQAREVAKKEAAASGGGRRPRAPSRRALEASGQLKHDGAQWMTRERKAEEARFKAELREQRRQYKAAGLKSGVVLEAFVAEAAGTGTAGDGVGGGVAGELGVGSATTKHGRDPAWQKVSPGILAASPEQEQATEQEETLSPSSERPSKRPRPPAAPNSTPRSESPNMVEDLSGILDGPSSNGVA 372
BLAST of mRNA_Ecto-sp6_S_contig98.18794.1 vs. uniprot
Match: A0A6H5L640_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L640_9PHAE) HSP 1 Score: 483 bits (1243), Expect = 6.990e-160 Identity = 285/319 (89.34%), Postives = 294/319 (92.16%), Query Frame = 1
Query: 1141 KETTGTTPRQAPTVAAGVPQGETRAPSNVDKTGANKAWQGRKATKDRDSTDGGDKNSSSKKCRGSNGGKGKDNPGEVSKCNATKEDLPTTVSVETTVSSLRSPTSAAATKPLSSPPNRSGDTAGMAPSVEFHLLRQAREAAKKEAAXSGGGRRPRAPSRRALEASGQLKHDGAQWMTRERKAEEARFKAELREQRRQYKAAGLKSGVVLEAFVAEAAGTGTVGDGVGGGVAGEIGVGSATTKHGRDPAWQKVSPEMFAASPEQEQATKQEEALSPSSE-RPSKRPRPPAAPNSTPRSESPNMVEDLSGILDGPSSNGVA 2094
K+TT T PRQ P VAAGVPQGETRAPS+VDKTGAN AWQ RKA D STDGGDKNSSSKK RGSNGGK DN GE SK NAT+EDLPTTVSVETTVSSL SPTSAAATKPLSSPPNRSGDTAGMAPSVEFHLLRQAREAAKKEAAXSGGGRRPRAPSRRALEASGQLKHDGAQWMTRERKAEEAR KAELREQRRQYKAAG KSGVVLEAFVA+AAGTGTVGDGVGGGVAG+IGVGSATTKHGRDPAWQKVSPEM AAS EQEQAT++EE LS S+E RPSKRPRPPAAPNSTPRSESPNMVEDLSG+LDGPSSN VA
Sbjct: 7 KKTTDTKPRQTPAVAAGVPQGETRAPSSVDKTGANNAWQSRKAKNDGYSTDGGDKNSSSKKRRGSNGGK--DNRGEASKGNATREDLPTTVSVETTVSSLPSPTSAAATKPLSSPPNRSGDTAGMAPSVEFHLLRQAREAAKKEAAXSGGGRRPRAPSRRALEASGQLKHDGAQWMTRERKAEEARIKAELREQRRQYKAAGFKSGVVLEAFVAKAAGTGTVGDGVGGGVAGKIGVGSATTKHGRDPAWQKVSPEMLAASAEQEQATEKEELLSASAEKRPSKRPRPPAAPNSTPRSESPNMVEDLSGVLDGPSSNRVA 323
BLAST of mRNA_Ecto-sp6_S_contig98.18794.1 vs. uniprot
Match: A0A6H5LLY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LLY6_9PHAE) HSP 1 Score: 379 bits (973), Expect = 1.230e-115 Identity = 296/676 (43.79%), Postives = 367/676 (54.29%), Query Frame = 1
Query: 1 MEGNPMASASPFKADQMAPRFHHSQREAPVARPSSPPSSSSL---RVAPYSGQDLGQVQERAIPPTAGQPGRQACERTDGNRVAGTVEDPDLYPLRPTTARSAVAEKTPCKSSSVAPQPSAVGTPLVSPCPTSSALSATSAAKALVAQPPVGCQYPGCERRAKYGPKDEPPSACQAHKRAGQYTTNRHGDLYEATRDGDAFRTPAVVTTARPPQPSTSNPGKYLTACLVHQASDQSGLPSKIYCVNPSSSPLPKAPKMPSSTVPGLRPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVLKRTNRPVLSTGRKDGSQSSQKRDCLFPGCKARPTHGLPGAVRAVYCGSHKKGVMVHLFLESPDVSNNA-KATGSTAAGDIPSKETTGTTPRQAPTVAAGVPQG--ETRAPSNVDKTGANKAWQGRKATKDRDSTDGGDKNSSSKKCRGSNGGKGKDNPGEVSKCNATKEDLPTTVSVETTVSSLRSPTSAAATKPLSSPPNRSGDTAGMAPSVEFHLLRQAREAAKKEAAXSGGGRRPRAPSRRALEASGQLKHDGAQWMTRERKAEEARFKAELREQRRQYKAAGLKSGVVLEAFVAEAAGTGTVGDGV---GGGVAGEIGVGSATTKHGRDPAWQKVSPE-MFAASPEQEQATKQEEALSPSSERPSKRPRP 1998
M+ N S + + P ++H + P R +S S+SS R APYSGQD Q ++ P A G E P YPLRP AV ++ S A P G P++S P+SSA ++ AK L PV CQ+ GC A+YGP D PP CQ HKR GQ+TTNRHG L+ ATR+G+AFR A T PP P + N G ASDQS LPS PSSS PK P T G R VLKR NRP LS G SQSS+ CLFPGC ARP +GLPGA RAVYC SHKKG MV LF E+P + ++A KAT +P++ + G + RAP N+D+ GA A +GR+ T++ ++ DG + S K+ G GKD G +S T E+L T + + SSL SP AA KP S P NR D++GMAPSVEF +LRQARE AK EA SG GRRPRAPSRRALEA+G+LK GAQWM+RE+KAE+ R KAELR QR++Y+AAGLKSGVVLE FV A GT GDG+ G V GE G ATT G +P WQKVSPE + AASP+Q ++ E+ + ++PSK+ RP
Sbjct: 1 MDDNVATSTAQATDKKKLPVYNHRTNDDPSTRSASLSSASSCSCSRAAPYSGQDQFDAQPANSSVSSNGPALHAINAPGQAAATGAKEGPGPYPLRPRPTHGAVVKQALSVLKSSASHPGRAGMPVLSASPSSSAHTSVPPAKELPI--PVRCQHRGCSNLARYGPLDSPPCTCQLHKRVGQFTTNRHGALFRATREGNAFRKLAAATAKSPP-PCSINKGNLA-------ASDQSRLPSTGSSGAPSSSSHPK----PGKTS-GTR-------------------------------GQVLKRANRPGLSGGNNRESQSSRDSACLFPGCDARPDYGLPGATRAVYCFSHKKGPMVQLFKETPALPDSAGKATTGKPRSQVPTESSXXXXXXXXXXXXXXXXXGAKKKRAPRNIDRNGAKNARRGRQETEEDNNADGSGTHKSEKRSSG-----GKDERGAISSSTVTGENL-TKTTAKPAASSLPSPAPAAEPKPPSFPNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRLKAELRLQRKRYQAAGLKSGVVLEMFVPAATGTEAAGDGIEERDGEVRGE---GGATTPIGSNPGWQKVSPETLSAASPKQHSTGQRRESSVGTGQKPSKQVRP 621
BLAST of mRNA_Ecto-sp6_S_contig98.18794.1 vs. uniprot
Match: A0A6H5L360_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L360_9PHAE) HSP 1 Score: 359 bits (921), Expect = 4.510e-108 Identity = 290/657 (44.14%), Postives = 352/657 (53.58%), Query Frame = 1
Query: 1 MEGNPMASASPFKADQMAPRFHHSQREAPVARPSS--PPSS-SSLRVAPYSGQDLGQVQERAIPPTAGQPGRQACERTDGNRVAGTVEDPDLYPLRPTTARSAVAEKTPCKSSSVAPQPSAV----------GTPLVSPCPTSSALSATSAAKALVAQPPVG--CQYPGCERRAKYGPKDEPPSACQAHKRAGQYTTNRHGDLYEATRDGDAFRTPAVVTTARPPQPSTSNPGKYLTACLVHQASDQSGLPSKIYCVNPSSSPLPKAPKMPSSTVPGLRPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVLKRTNRPVLSTGRKDGSQSSQKRDCLFPGCKARPTHGLPGAVRAVYCGSHKKGVMVHLFLESPDVSNNAKATGSTAAGDIPSKETTGTTPRQAPTVAAGVPQGETRAPSNVDKTGANKAWQGRKATKDRDSTDGGDKNSSSKKCRGSNGGKGKDNPGEVSKCNATKEDLPTTVSVETTVSSLRSPTSAAATKPLSSPPNRSGDTAGMAPSVEFHLLRQAREAAKKEAAXSGGGRRPRAPSRRALEASGQLKHDGAQWMTRERKAEEARFKAELREQRRQYKAAGLKSGVVLEAFVAEAAGTGTVGDGV---GGGVAGEIGVGSATTKHGRDPAWQKVSPEMFAA 1917
M+ N S + + P +++ + P R SS P SS SS RV PYSGQD Q ++ P AGT E YPLRP AV ++ S A QPS G ++S P+S A +A AK +PP+ CQ+ GC A+YGP D PP ACQ HKR GQ+TTNRHG L+ ATR+G+AFR A T PP P + N G + ASDQS LPS SSS PK P+ S T VLKR NR +S G GSQSS+ R CLFPGC ARP +GLPGA RA+YC +HKK MV LF E P + N A G+ G K + G V +TRAPSN+D+ GA KA +G + T++ + D G K++S K R S GGK D G +S T E+L T +V+T+ SSL P A P SS NR D++GMAPSVEF +LRQAREAAK EA SG GRRPRAPSRRALEA+G+LK GAQWM+RE+KAE+ R KAELR QR+QY+AAGLKSGVVLE FV A GT GDG+ G V GE G ATT G +P W KVSPE +A
Sbjct: 1 MDENKATSTAQPTDNNTLPVYNNRTNDVPSTRSSSSSPTSSCSSSRVTPYSGQDQLDAQLANSSVSSESPALHDLNTPGQAAAAGTKEGSGPYPLRPRPTHGAVVKQALSIFKSSASQPSXXXXXXXXXGGPGVRVLSTSPSSPAHTAVPPAK----EPPIPMHCQHRGCSNLARYGPLDSPPRACQLHKRVGQFTTNRHGALFRATREGNAFRKLAAATVKSPP-PCSINKGDLV-------ASDQSRLPSTGSSGASSSSSHPK-PEETSGT-----------------------------------RGQVLKRANRQGISGGHNGGSQSSRNRTCLFPGCDARPDYGLPGATRAMYCFAHKKAPMVQLFKELPALPNKA---GNATTG----KRSQGPAAXXXXXXXXSVGANKTRAPSNIDRNGAKKARRGPQETEEDNDVDSGGKHTSKK--RRSTGGK--DERGGISSAKVTGENL-TKPTVKTSASSLPPPAPAFEPNPPSSSNNRLADSSGMAPSVEFLVLRQAREAAKTEAEASGLGRRPRAPSRRALEAAGRLKGIGAQWMSREKKAEDLRLKAELRLQRKQYQAAGLKSGVVLEMFVPAATGTEAAGDGIEQRDGEVRGE---GGATTPRGSNPGWHKVSPEALSA 594
BLAST of mRNA_Ecto-sp6_S_contig98.18794.1 vs. uniprot
Match: D7G0V0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0V0_ECTSI) HSP 1 Score: 280 bits (715), Expect = 1.710e-81 Identity = 192/365 (52.60%), Postives = 229/365 (62.74%), Query Frame = 1
Query: 889 AVLKRTNRPVLSTGRKDGSQSSQKRDCLFPGCKARPTHGLPGAVRAVYCGSHKKGVMVHLFLESPDVSNNAKATGSTAAGDIPSKETTGTTPRQAPT----VAAGVPQGETRAPSNVDKTGANKAWQGRKATKDRDSTDGGDKNSSSKKCRGSNGGKGKDNPGEVSKCNATKEDLPTTVSVETTVSSLRSPTSAAATKPLSSPPNRSGDTAGMAPSVEFHLLRQAREAAKKEAAXSGGGRRPRAPSRRALEASGQLKHDGAQWMTRERKAEEARFKAELREQRRQYKAAGLKSGVVLEAFVAEAAGTGTVGDGV---GGGVAGEIGVGSATTKHGRDPAWQKVSPEMFAASPEQEQATKQEEALS 1962
++ K NRP LS G GSQSS+ R CLFPGC ARP +GLPGA RAVYC SHKKG MV LF E+P A D P K TTG QAPT AA V RAPSN+D+ A KA +G++ T++ + D + S K+ G GKD G +S E+L T + +T+ S SP AA P SSP NR D++GMAPSVEF +LRQARE AK EA SG GRRPRAPSRRALEA+G+LK GAQWM+RE+KAE+ R KAELR+QR+QY+AAGLKSGVVLE FV EA GT GDG+ G V GE G ATT G +P WQKVSPE+ +A ++ T Q E S
Sbjct: 27 SINKGANRPGLSGGHNGGSQSSRNRSCLFPGCDARPDYGLPGATRAVYCFSHKKGPMVQLFKETP------------ALPDNPGKATTGKPRSQAPTEPAAAAASVGTKNPRAPSNIDRNAAKKARRGQQETEEDNDADVSGTHRSKKRSSG-----GKDERGAISSSTVAGENL-TKTTAKTSAPSFPSPAPAAEANPPSSPNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRLKAELRQQRKQYQAAGLKSGVVLEMFVPEATGTEAAGDGIEERDGEVRGE---GGATTLRGSNPGWQKVSPEVLSAPSSKQHGTGQREETS 370
BLAST of mRNA_Ecto-sp6_S_contig98.18794.1 vs. uniprot
Match: D8LGW8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGW8_ECTSI) HSP 1 Score: 263 bits (671), Expect = 2.320e-74 Identity = 217/537 (40.41%), Postives = 279/537 (51.96%), Query Frame = 1
Query: 238 VAGTVEDPDLYPLRPTTARSAVAEKTPCKSSSVAPQPSAVGTPLVSPCPTSSALSATSAAKALVAQPPVGCQYPGCERRAKYGPKDEPPSACQAHKRAGQYTTNRHGDLYEATRDGDAFRTPAV----VTTARPPQPSTSNPGKYLTACLVHQASDQSGLPSKIYCVNPSSSPLPKAPKMPSSTVPGLRPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVLKRTNRPVLSTGRKDGSQSSQKRDCLFPGCKARPTHGLPGAVRAVYCGSHKKGVMVHLFLESPDVSNNAKATGSTAAGDIPSKETTGTTPRQAPTVAAGVPQGETRAPS-NVDKTGANKAWQGRKATKDRDSTDGGDKNSSSKKCRGSNGGKG-KDNPGEVSKCNATKEDLPTTVSVETTVSSLRSPTSAAATKP--------------LSSPP---NRSGDTAGMAPSVEFHLLRQAREAAKKEAAXSGGGRRPRAPSRRALEASGQLKHDGAQWMTRERKAEEARFKAELREQRRQYKAAGLKSGVVLEAFV 1779
+AG+ DP+ RP TA A++T SSS++P S + +SP PTS TS+ K L+A C+YPGC + AKYG +D PPS CQAHKRAGQYTTNRHG+L ATRDGDAFRTPAV + PP P++S + A +G + +PS P + SS LKR NRP S+ + S + Q R CLFPGC ARPT+GLPGA RAVYC SHKKG MV+LF ++P V+NN + K T P + S D+ GA KA + +D +K ++SK G G K +DN +V++ T E ++ + T ++A KP ++ PP NR + GM+PSVE +LRQAREAAKKEA SGGGRR RAPSRRALEASG+L+ DGAQWMTRE++AE+AR ELRE+R++ + AGL GVVLEAFV
Sbjct: 1 MAGSDLDPNPMSSRPKTAP---ADETRGTSSSLSPGVSPTSS--LSPPPTS-----TSSPKTLLAPKAPRCEYPGCPKYAKYGLRDAPPSKCQAHKRAGQYTTNRHGELLMATRDGDAFRTPAVAVPVLAVTVPPSPASSEIAG-MEAASAQPRRRSTGSSGSL---------------VPSHRKPKAKLSSSVH---------------------------TLKRKNRPEPSSSGHEESPALQNRSCLFPGCDARPTYGLPGAARAVYCFSHKKGSMVNLFSQAPAVNNNEE------------KRVTAVAPTEGKRKKXXXXXXXXXXXSMTADQRGAKKARRESSIKED-------NKGATSKDGGGYQGAKKIRDNEKKVNRGVGTSERSVGAIATAAAAGTSEMSTKSSAAKPPVKSTHIAKEPADTMALPPQPTNRPSE--GMSPSVEMLILRQAREAAKKEAEASGGGRRARAPSRRALEASGRLRGDGAQWMTREKRAEQARVNTELREKRKKSREAGLTVGVVLEAFV 463
BLAST of mRNA_Ecto-sp6_S_contig98.18794.1 vs. uniprot
Match: A0A6H5KYF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYF0_9PHAE) HSP 1 Score: 259 bits (661), Expect = 5.830e-73 Identity = 219/534 (41.01%), Postives = 279/534 (52.25%), Query Frame = 1
Query: 238 VAGTVEDPDLYPLRPTTARSAVAEKTPCKSSSVAPQPSAVGTPLVSPCPTSSALSATSAAKALVAQPPVGCQYPGCERRAKYGPKDEPPSACQAHKRAGQYTTNRHGDLYEATRDGDAFRTPAVVTTAR----PPQPSTSNPGKYLTACLVHQASDQSGLPSKIYCVNPSSSPLPKAPKMPSSTVPGLRPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVLKRTNRPVLSTGRKDGSQSSQKRDCLFPGCKARPTHGLPGAVRAVYCGSHKKGVMVHLFLESPDVSNNAKATGSTAAGDIPSKETTGTTPRQAPTVAAGVPQGETRAPSNVDKTGANKAWQGRKATKDRDSTDGGDKNSSSKKCRGSNGGKG-KDNP----GEVSKCNATKEDLPTTVSVETTVSSLRSPTSAAATKP-----------LSSPPNRSGDTAGMAPSVEFHLLRQAREAAKKEAAXSGGGRRPRAPSRRALEASGQLKHDGAQWMTRERKAEEARFKAELREQRRQYKAAGLKSGVVLEAFV 1779
+AG+ DP+ RP TA A++T SSS++P S + +SP PTS TS+ K L A C+YPGC + AKYG +D PPS CQAHKRAGQYTTNRHG+L ATRDGDAFRTPAV PP P++S + S P + + SS +PS P + SS LKR +RP S+ R + S++ Q CLFP C ARP +GLPGA RA YC SHKKG MV LF E+P V+N+ A P+ T G +Q G T D+ GA KA + +D +K ++SK G G K +DN G + A+ + T + T+ S +SP + + KP + P S + GMAPSVE +LRQAREAAK EA SG GRRPRAPSRRALEASG+L+ DGAQWMTRE+KAE+AR +ELR++R++ + AGLK GVVLEAFV
Sbjct: 1 MAGSDLDPNPMSSRPKTAP---ADETRGTSSSLSPGVSPASS--MSPPPTS-----TSSPKTLQAPTAPRCEYPGCPKSAKYGLRDAPPSKCQAHKRAGQYTTNRHGELLMATRDGDAFRTPAVAVPVPAVTVPPSPASSE---------IAGTEAASAQPRRRSTGSTGSS-------VPSHRKPKAKLSSSVH---------------------------ALKRKSRPGTSSSRHEESRAPQYHSCLFPECGARPIYGLPGAARAAYCFSHKKGSMVDLFSEAPAVNNHE------AKRVTPAAPTEGKRKKQKKGHEERKMTGMT-----ADQRGAKKARRESSIKED-------NKGATSKDDGGHRGAKKIRDNKTKVNGGMGASEASVGAIVTAAAAGTSEMSTKSPAAKPSVKPTRKVKEPADTIVPPPQPTSRPSDGMAPSVEMLILRQAREAAKTEAEASGSGRRPRAPSRRALEASGRLRGDGAQWMTREKKAEQARVNSELRKKRKESREAGLKVGVVLEAFV 463
BLAST of mRNA_Ecto-sp6_S_contig98.18794.1 vs. uniprot
Match: A0A6H5KLI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLI4_9PHAE) HSP 1 Score: 262 bits (670), Expect = 2.390e-72 Identity = 216/538 (40.15%), Postives = 274/538 (50.93%), Query Frame = 1
Query: 238 VAGTVEDPDLYPLRPTTARSAVAEKTPCKSSSVAPQPSAVGTPLVSPCPTSSALSATSAA---KALVAQPPVGCQYPGCERRAKYGPKDEPPSACQAHKRAGQYTTNRHGDLYEATRDGDAFRTPAVVTTARPPQPSTSNPGKYLTACLVHQASDQSGLPSKIYCVNPSSSPLPKAPKMPSSTVPGLRPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVLKRTNRPVLSTGRKDGSQSSQKRDCLFPGCKARPTHGLPGAVRAVYCGSHKKGVMVHLFLESPDVSNNAKATGSTAAGDIPSKETTGTTPRQAPTVAAGVPQGETRAPSNVDKTGANKAWQGRKATKDRDSTDGGDKNSSSKKCRGSNGGKG-KDNPGEVSK----CNATKEDLPTTVSVETTVSSLRSPTS-------------AAATKPLSSPPNRSGDTAGMAPSVEFHLLRQAREAAKKEAAXSGGGRRPRAPSRRALEASGQLKHDGAQWMTRERKAEEARFKAELREQRRQYKAAGLKSGVVLEAFVAEA 1788
VAG+ DP+ RP TA A++T SSS++P S PTSS K L C+YPGC + AKYG ++ PPS CQAHKRAGQYTTNRHG+L ATRDGDAFRTPAV P P+ + P P SS + G +S LKR NRP S+ R + S + + R CLFPGC ARPTHGLPGA RAVYC SHKKG MV LF E+ V+N+ + + ++AA PT G + +T+A + TG +G K + S G+K ++SK G G K +DN +V++ + + T + T+ S++SP + A T P P +R D GMAPSVE +LRQAREAAK EA SG GRRPRAPSRRALEASG+L+ DGAQWMTRE+KAE+AR +ELR++R++ + AGLK GVVLEAFV A
Sbjct: 55 VAGSDLDPNPMSSRPKTAP---ADETRGTSSSLSPGAS----------PTSSLXXXXXXXXXPKTLPVPKAPRCEYPGCPKSAKYGLREAPPSKCQAHKRAGQYTTNRHGELLMATRDGDAFRTPAVAV----PVPAVTVP-----------------------------------PSPASSEIAGTEAASARPRRRSTGSSGSSVPSHRKPKENLSSSVHTLKRKNRPGTSSSRHEESPAPKNRSCLFPGCGARPTHGLPGAARAVYCFSHKKGSMVDLFSEALAVNNHEEKSVTSAA----------------PT--EGKKKKQTQAKKEREMTGMTADQRGAKQARRESSIMEGNKGTTSKDDGGHRGAKKIRDNETKVNRGMGASGGSVGAIATAAAAGTSEMSVKSPAAKPLVKSTSEAKEPADTTAPPPQPTSRPSD--GMAPSVEMLILRQAREAAKTEAEASGSGRRPRAPSRRALEASGRLRGDGAQWMTREKKAEQARVNSELRKKRKESREAGLKVGVVLEAFVPRA 520
BLAST of mRNA_Ecto-sp6_S_contig98.18794.1 vs. uniprot
Match: D7G0U7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0U7_ECTSI) HSP 1 Score: 238 bits (608), Expect = 1.610e-66 Identity = 181/434 (41.71%), Postives = 225/434 (51.84%), Query Frame = 1
Query: 448 CQYPGCERRAKYGPKDEPPSACQAHKRAGQYTTNRHGDLYEATRDGDAFRTPAVVTTARPPQPSTSNPGKYLTACLVHQASDQSGLPSKIYCVNPSSSPLPKAPKMPSSTVPGLRPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVLKRTNRPVLSTGRKDGSQSSQKRDCLFPGCKARPTHGLPGAVRAVYCGSHKKGVMVHLFLESPDVSNNAKATGSTAAGDIPSKETTGTTPRQAPTVAA-----GVPQGETRAPSNVDKTGANKAWQGRKATKDRDSTDGGDKNSSSKKCRGSNGGKGKDNPGEVSKCNATKEDLPTTVSVETTVSSLRSPTSAAATKPLSSPPNRSGDTAGMAPSVEFHLLRQAREAAKKEAAXSGGGRRPRAPSRRALEASGQLKHDGAQWMTRERKAEEARFKAELREQRRQY 1734
CQ+ GC A+YGP D PP ACQ HKR GQ+TT+RHG L+ ATR+G+AFR A T PP C + + S SG S SS P+P G S+ + GC+ARP +GLPGA RAVYC SHKKG MV LF E P + N A S AA + K TTG Q P V +TRAPS++D+ G+ KA +G++ T++ + D + S K+ G GKD G +S TKE+L T + +T+ SL SP AA P SSP NR D++GMAPSVEF +LRQARE AK EA SG GRRPRAPSRRALEA+G+LK GAQWM+RE+KAE+ R KAELR+QR+QY
Sbjct: 3 CQHRGCSNLARYGPLDSPPRACQLHKRVGQFTTDRHGALFRATREGNAFRELAAATVKSPPP------------CSIFKGS--SGRSSS------SSHPMP---------------------------------------------------------------GRTSATR------GCEARPDYGLPGATRAVYCFSHKKGPMVQLFKEPPSLPNKAGQAESAAAPVVTRKATTGKR-SQGPAXXXXXXXXSVGAKKTRAPSDIDRNGSKKARRGQQETEEDNDADVSGTHRSKKRRSG-----GKDERGAISSAQVTKENL-TKTTAKTSAPSLPSPAPAAEANPPSSPNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRVKAELRQQRKQY 340
BLAST of mRNA_Ecto-sp6_S_contig98.18794.1 vs. uniprot
Match: D8LH07_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH07_ECTSI) HSP 1 Score: 180 bits (456), Expect = 4.220e-46 Identity = 165/421 (39.19%), Postives = 210/421 (49.88%), Query Frame = 1
Query: 571 ATRDGDAFRTPAVVTTARPPQPSTSNPGKYLTACLVHQASDQSGLPSKIYCVNPSSSPLPKA-----PKMPSSTVPGLRPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVLKRTNRPVLSTGRKDGSQSSQKRDCLFPGCKARPTHGLPGAVRAVYCGSHKKGVMVHLFLESPDVSNNAKATGSTAA----------GDIPSKETTGTTPRQAPTVAAGVPQGETRAPSNVDKTGANKAWQG--RKATKDRDSTDGGDKNSSSKKCRGSNGGKGKDNPGEVSKCNAT-KEDLPTTVSVETTVSSLRSPTSAAATKPLSSPPNRSGDTAGMAPSVEFHLLRQAREAAKKEAAXSGGGRRPRAPSRRALEASGQLKHDGAQWMTRERKAEEARFKAELREQRRQYKAAGLKSGVVLEAFV 1779
ATRDGDAFRTPAV P P+ + P L +S+ +G + S+ P ++ P +PS P + SS LKR NRP S+ + S + Q R CLFPGC ARP +GLPGA AVYC SHKKG MV+LF +P V+N+ + + AA ++ TG T Q G + + D GA G R A K+R + +K RG+ +G + G+V+ A ++ T + + L S A P S + GMAPSVE +LRQAREAAK EA SGGGRR RAPSRRALEASGQLK DGAQWMTRE+KAE+AR ELRE+R++ + AGLK GVVLEAFV
Sbjct: 2 ATRDGDAFRTPAVAV----PVPAVTVP-------LSPASSEIAGTEAA------SAQPRRRSTGSSGPSVPSQCKPKAKLSSSVH---------------------------TLKRKNRPGTSSSGHEESPAPQNRPCLFPGCGARPIYGLPGAAHAVYCFSHKKGSMVNLFSRAPAVNNHEEKMVTPAAPTEGKRKXXXXXXXXRKMTGMTADQ-----RGAKKARRESSIKEDNKGATSKDDGGHRGAKKNR--------GNETKVNRGTGASEG--SVGDVATAAAAGTSEMSTKLPAAKPLVKLTSKAEEPADTMAPPPQPTSRPSEGMAPSVEMLILRQAREAAKTEAEASGGGRRARAPSRRALEASGQLKGDGAQWMTREKKAEQARVNTELREKRKKSREAGLKVGVVLEAFV 363 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig98.18794.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig98.18794.1 >prot_Ecto-sp6_S_contig98.18794.1 ID=prot_Ecto-sp6_S_contig98.18794.1|Name=mRNA_Ecto-sp6_S_contig98.18794.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=699bp MEGNPMASASPFKADQMAPRFHHSQREAPVARPSSPPSSSSLRVAPYSGQback to top mRNA from alignment at Ecto-sp6_S_contig98:525997..532626+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig98.18794.1 ID=mRNA_Ecto-sp6_S_contig98.18794.1|Name=mRNA_Ecto-sp6_S_contig98.18794.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=6630bp|location=Sequence derived from alignment at Ecto-sp6_S_contig98:525997..532626+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig98:525997..532626+ >mRNA_Ecto-sp6_S_contig98.18794.1 ID=mRNA_Ecto-sp6_S_contig98.18794.1|Name=mRNA_Ecto-sp6_S_contig98.18794.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=2097bp|location=Sequence derived from alignment at Ecto-sp6_S_contig98:525997..532626+ (Ectocarpus species6 EcLAC_371)back to top |