prot_Ecto-sp6_S_contig98.18785.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig98.18785.1
Unique Nameprot_Ecto-sp6_S_contig98.18785.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length310
Homology
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BLAST of mRNA_Ecto-sp6_S_contig98.18785.1 vs. uniprot
Match: D8LEM9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEM9_ECTSI)

HSP 1 Score: 436 bits (1120), Expect = 1.570e-151
Identity = 265/309 (85.76%), Postives = 267/309 (86.41%), Query Frame = 0 
Query:    1 MSATGNTGADIDTNGVAPPHQQQQQPQQSHVFVLPPALGHPSLETDQQKSLDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEQQLRFGTSTAPSQAAGRASDAGVDGVTSKPHALAPHKRGVDWRELKGNLNFLLKEEGELTGRDLNHAFQQRFGKKSPFLDGTPLRYAVSAGWLKGVCYDLTNKCFNLTVRVPAGRREDPPDGAPAFPPTGSQLRAGAPRRDVPRSLSPDDFDWGRLSTEFRQLLLPGALGPKEVHVKYHREFRKPLILGEGYNMRQAVTAGLLIGITFDPGTRRLMCA 309
            MSATGNTGADI TNGVA PHQ                                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EQQLRFGTS APSQAAGRASDAGV GVTS+PHALAP KRGVDWRELKGNLNFLLKEEGELTGRDLNHAFQQRFGK SPFLDGTPLRYAVSAGWLKGVCYDLTNKCFNLTVRVPAGRREDPPDGAP FPPTGSQLRAGAPRRDVPRSLSPDDFDWGRLSTEFRQLLL GAL PKEVHVKYHREFRKPLILGEGYNMRQAVTAGLLIGITFDPG+RRLMCA
Sbjct:    1 MSATGNTGADIGTNGVALPHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQQLRFGTSAAPSQAAGRASDAGVGGVTSRPHALAPQKRGVDWRELKGNLNFLLKEEGELTGRDLNHAFQQRFGK-SPFLDGTPLRYAVSAGWLKGVCYDLTNKCFNLTVRVPAGRREDPPDGAPTFPPTGSQLRAGAPRRDVPRSLSPDDFDWGRLSTEFRQLLLQGALEPKEVHVKYHREFRKPLILGEGYNMRQAVTAGLLIGITFDPGSRRLMCA 308
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BLAST of mRNA_Ecto-sp6_S_contig98.18785.1 vs. uniprot
Match: A0A6H5KX85_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX85_9PHAE)

HSP 1 Score: 202 bits (513), Expect = 4.500e-57
Identity = 109/166 (65.66%), Postives = 116/166 (69.88%), Query Frame = 0 
Query:    1 MSATGNTGADIDTNGVAPPHQQQQQPQQSHVFVLPPALGHPSLETDQQKSLDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-SEQQLRFGTSTAPSQAAGRASDAGVDGVTSKPHALAPHKRGVDWRELKGNLNFLLKEEGELTGRDLNHAFQQRFGK 165
            MSATGNTGADI T GVAPPHQQ+QQPQQS  FV PPA+G+PSLETDQ  SLDD                                     SE QLRFG S APSQAAGRASDAGV GVTS+PHA+AP KRGVDW+ELKGN+N LLKEEGELTGRDLNHAFQQRFGK
Sbjct:  383 MSATGNTGADIGTTGVAPPHQQRQQPQQSQAFVQPPAIGYPSLETDQHMSLDDTTTGCVPGTTASDDNKDDAAETAGDSDGWAEEKQEDDSEHQLRFGISAAPSQAAGRASDAGVGGVTSRPHAVAPQKRGVDWKELKGNVNLLLKEEGELTGRDLNHAFQQRFGK 548
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig98.18785.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LEM9_ECTSI1.570e-15185.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KX85_9PHAE4.500e-5765.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig98contigEcto-sp6_S_contig98:480370..482630 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig98.18785.1mRNA_Ecto-sp6_S_contig98.18785.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig98 480370..482630 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig98.18785.1 ID=prot_Ecto-sp6_S_contig98.18785.1|Name=mRNA_Ecto-sp6_S_contig98.18785.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=310bp
MSATGNTGADIDTNGVAPPHQQQQQPQQSHVFVLPPALGHPSLETDQQKS
LDDTTTVPGTTASDDGNKDDTAEAAGDSDGWAEEKQEDDSEQQLRFGTST
APSQAAGRASDAGVDGVTSKPHALAPHKRGVDWRELKGNLNFLLKEEGEL
TGRDLNHAFQQRFGKKSPFLDGTPLRYAVSAGWLKGVCYDLTNKCFNLTV
RVPAGRREDPPDGAPAFPPTGSQLRAGAPRRDVPRSLSPDDFDWGRLSTE
FRQLLLPGALGPKEVHVKYHREFRKPLILGEGYNMRQAVTAGLLIGITFD
PGTRRLMCA*
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